View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6149_low_7 (Length: 453)

Name: NF6149_low_7
Description: NF6149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6149_low_7
NF6149_low_7
[»] chr7 (47 HSPs)
chr7 (1-412)||(22298605-22299016)
chr7 (75-412)||(11834060-11834399)
chr7 (75-375)||(10338435-10338742)
chr7 (75-412)||(20334731-20335078)
chr7 (77-412)||(8568146-8568477)
chr7 (75-405)||(1812628-1812958)
chr7 (75-270)||(7697436-7697630)
chr7 (75-266)||(48642935-48643125)
chr7 (75-274)||(8118018-8118216)
chr7 (103-412)||(27100200-27100510)
chr7 (103-412)||(27177793-27178103)
chr7 (95-274)||(34751159-34751336)
chr7 (75-231)||(35819851-35820007)
chr7 (82-266)||(37375482-37375665)
chr7 (75-273)||(31287515-31287700)
chr7 (101-179)||(16359334-16359412)
chr7 (102-410)||(2734523-2734809)
chr7 (313-412)||(26208885-26208984)
chr7 (314-412)||(31287374-31287472)
chr7 (102-274)||(23729549-23729717)
chr7 (313-409)||(25007648-25007742)
chr7 (83-273)||(30855251-30855440)
chr7 (75-179)||(6879928-6880031)
chr7 (75-143)||(30079452-30079519)
chr7 (313-412)||(7697678-7697782)
chr7 (176-297)||(23675626-23675746)
chr7 (313-410)||(27456714-27456811)
chr7 (318-412)||(35495799-35495893)
chr7 (315-412)||(8117879-8117976)
chr7 (138-266)||(22701082-22701209)
chr7 (102-151)||(43908846-43908895)
chr7 (176-273)||(46147459-46147555)
chr7 (147-271)||(49012268-49012392)
chr7 (142-221)||(33434325-33434405)
chr7 (313-412)||(40849245-40849344)
chr7 (313-411)||(6879695-6879793)
chr7 (102-202)||(32237839-32237941)
chr7 (318-412)||(34751383-34751476)
chr7 (189-274)||(23032943-23033026)
chr7 (102-142)||(16535617-16535657)
chr7 (102-142)||(16630005-16630045)
chr7 (102-142)||(21237631-21237671)
chr7 (329-397)||(23675771-23675839)
chr7 (102-142)||(36550652-36550692)
chr7 (246-274)||(43202732-43202760)
chr7 (102-142)||(47483807-47483847)
chr7 (74-142)||(47646590-47646657)
[»] chr4 (52 HSPs)
chr4 (75-411)||(8484820-8485163)
chr4 (75-412)||(4642595-4642933)
chr4 (75-412)||(21069203-21069544)
chr4 (75-273)||(23625637-23625834)
chr4 (75-274)||(27743348-27743546)
chr4 (102-412)||(1564659-1564974)
chr4 (81-412)||(23449582-23449914)
chr4 (95-412)||(20986565-20986885)
chr4 (77-410)||(29232898-29233233)
chr4 (80-232)||(15724044-15724197)
chr4 (118-258)||(48653602-48653743)
chr4 (80-274)||(53934801-53934993)
chr4 (182-412)||(41325649-41325881)
chr4 (75-203)||(45464342-45464469)
chr4 (313-412)||(45464542-45464641)
chr4 (75-223)||(23120033-23120182)
chr4 (103-273)||(35014448-35014619)
chr4 (75-221)||(45983531-45983678)
chr4 (80-356)||(6102040-6102316)
chr4 (75-266)||(19753246-19753437)
chr4 (75-266)||(19786369-19786560)
chr4 (182-412)||(28148019-28148250)
chr4 (119-231)||(2940100-2940212)
chr4 (102-274)||(45226549-45226718)
chr4 (184-274)||(4688937-4689026)
chr4 (112-273)||(5122119-5122280)
chr4 (106-271)||(3666809-3666974)
chr4 (95-227)||(45150739-45150871)
chr4 (75-213)||(8312040-8312179)
chr4 (205-274)||(42199068-42199136)
chr4 (102-144)||(17845077-17845119)
chr4 (358-412)||(23625507-23625561)
chr4 (216-274)||(49641121-49641178)
chr4 (102-143)||(10778339-10778380)
chr4 (157-273)||(25686199-25686314)
chr4 (156-231)||(7784321-7784397)
chr4 (107-150)||(40494613-40494656)
chr4 (102-145)||(54273883-54273926)
chr4 (102-168)||(12916561-12916627)
chr4 (75-161)||(28147931-28148015)
chr4 (313-410)||(32222912-32223010)
chr4 (176-274)||(46471675-46471772)
chr4 (233-274)||(18536397-18536438)
chr4 (313-362)||(29701020-29701069)
chr4 (331-412)||(41260514-41260595)
chr4 (356-413)||(48293026-48293083)
chr4 (102-151)||(51907257-51907306)
chr4 (102-150)||(3349780-3349828)
chr4 (156-231)||(7764209-7764285)
chr4 (102-142)||(18881897-18881937)
chr4 (246-274)||(48293164-48293192)
chr4 (210-274)||(48602247-48602310)
[»] chr5 (44 HSPs)
chr5 (75-412)||(25495238-25495578)
chr5 (121-375)||(10090423-10090678)
chr5 (75-274)||(36567863-36568061)
chr5 (75-412)||(41455021-41455359)
chr5 (75-410)||(28224458-28224795)
chr5 (102-273)||(34087584-34087748)
chr5 (75-266)||(17131820-17132011)
chr5 (102-266)||(35240564-35240728)
chr5 (136-410)||(33792857-33793120)
chr5 (75-266)||(14652606-14652796)
chr5 (75-266)||(32244116-32244307)
chr5 (75-233)||(6595134-6595293)
chr5 (102-266)||(34881065-34881230)
chr5 (75-273)||(11402746-11402942)
chr5 (102-179)||(31075439-31075516)
chr5 (102-231)||(6894177-6894307)
chr5 (75-233)||(691332-691488)
chr5 (313-410)||(5175229-5175326)
chr5 (313-412)||(22553744-22553843)
chr5 (182-273)||(40331220-40331310)
chr5 (102-191)||(12264051-12264141)
chr5 (185-274)||(40692714-40692802)
chr5 (176-274)||(18432338-18432435)
chr5 (102-145)||(1681297-1681340)
chr5 (315-413)||(4414609-4414707)
chr5 (102-191)||(6367663-6367753)
chr5 (216-274)||(7591216-7591273)
chr5 (315-413)||(38147500-38147598)
chr5 (313-407)||(42920640-42920734)
chr5 (103-155)||(733881-733933)
chr5 (102-142)||(6718778-6718818)
chr5 (105-153)||(8150803-8150851)
chr5 (182-274)||(12378819-12378910)
chr5 (102-197)||(32721276-32721372)
chr5 (313-412)||(18432476-18432575)
chr5 (314-364)||(2802629-2802679)
chr5 (103-173)||(19402361-19402431)
chr5 (80-142)||(36760267-36760328)
chr5 (313-354)||(6633690-6633731)
chr5 (102-179)||(20191760-20191837)
chr5 (107-140)||(26007227-26007260)
chr5 (206-274)||(6633582-6633649)
chr5 (233-273)||(25715555-25715595)
chr5 (246-274)||(27571795-27571823)
[»] chr8 (29 HSPs)
chr8 (75-371)||(11219099-11219401)
chr8 (75-411)||(24681685-24682017)
chr8 (75-410)||(13325448-13325786)
chr8 (75-398)||(12193073-12193397)
chr8 (75-398)||(12437501-12437825)
chr8 (75-412)||(22810785-22811116)
chr8 (75-274)||(4785388-4785586)
chr8 (75-283)||(37162379-37162583)
chr8 (75-266)||(11017159-11017349)
chr8 (75-262)||(33566101-33566275)
chr8 (82-273)||(40436593-40436782)
chr8 (79-274)||(9012572-9012766)
chr8 (75-266)||(36340490-36340681)
chr8 (102-273)||(41346084-41346255)
chr8 (75-270)||(18755065-18755261)
chr8 (138-412)||(1271352-1271619)
chr8 (176-412)||(28441718-28441955)
chr8 (317-411)||(3155622-3155716)
chr8 (80-173)||(30253954-30254046)
chr8 (102-145)||(28073070-28073113)
chr8 (75-142)||(6591384-6591448)
chr8 (101-142)||(7428293-7428334)
chr8 (80-116)||(31497492-31497528)
chr8 (111-232)||(29914373-29914495)
chr8 (313-352)||(30252726-30252765)
chr8 (313-411)||(12073818-12073916)
chr8 (182-259)||(30253501-30253577)
chr8 (113-178)||(32063973-32064038)
chr8 (246-274)||(3129386-3129414)
[»] chr6 (27 HSPs)
chr6 (75-410)||(9686198-9686532)
chr6 (79-405)||(6399975-6400306)
chr6 (75-410)||(7169680-7170017)
chr6 (79-274)||(24644692-24644885)
chr6 (95-410)||(22413970-22414294)
chr6 (107-274)||(31945174-31945341)
chr6 (80-274)||(13092148-13092342)
chr6 (82-238)||(16971516-16971671)
chr6 (176-403)||(29048794-29049022)
chr6 (75-266)||(11417217-11417408)
chr6 (82-266)||(13532020-13532203)
chr6 (176-274)||(892080-892177)
chr6 (107-161)||(8135589-8135643)
chr6 (79-232)||(20500712-20500865)
chr6 (176-274)||(19134841-19134938)
chr6 (313-410)||(24644556-24644651)
chr6 (120-232)||(28610808-28610923)
chr6 (319-412)||(8064880-8064974)
chr6 (314-412)||(13531869-13531967)
chr6 (184-274)||(28633200-28633289)
chr6 (102-179)||(12147836-12147913)
chr6 (319-396)||(31945070-31945147)
chr6 (102-142)||(4563046-4563086)
chr6 (319-410)||(19134703-19134794)
chr6 (313-359)||(16971405-16971451)
chr6 (313-354)||(4577478-4577519)
chr6 (102-142)||(4577277-4577317)
[»] chr3 (45 HSPs)
chr3 (95-412)||(55467239-55467557)
chr3 (75-283)||(2566060-2566267)
chr3 (75-412)||(25918850-25919187)
chr3 (112-412)||(22255894-22256197)
chr3 (75-412)||(26758376-26758715)
chr3 (75-273)||(54122468-54122667)
chr3 (75-302)||(27054226-27054458)
chr3 (75-405)||(45629341-45629671)
chr3 (75-233)||(38651764-38651924)
chr3 (87-405)||(45914805-45915129)
chr3 (79-274)||(4280436-4280633)
chr3 (75-273)||(37045461-37045655)
chr3 (87-274)||(42362954-42363140)
chr3 (313-412)||(8355716-8355814)
chr3 (82-273)||(44651118-44651307)
chr3 (95-273)||(46253188-46253362)
chr3 (102-179)||(55129913-55129990)
chr3 (105-274)||(4668908-4669077)
chr3 (82-267)||(5640471-5640653)
chr3 (75-233)||(4554842-4555001)
chr3 (75-230)||(8557729-8557884)
chr3 (82-263)||(50578746-50578926)
chr3 (79-194)||(48167420-48167533)
chr3 (79-274)||(21562707-21562898)
chr3 (102-274)||(22472801-22472975)
chr3 (78-142)||(25465956-25466019)
chr3 (208-412)||(48168951-48169158)
chr3 (313-412)||(46253042-46253147)
chr3 (313-398)||(38681602-38681687)
chr3 (105-274)||(10481354-10481526)
chr3 (102-145)||(20038561-20038604)
chr3 (111-232)||(21238219-21238342)
chr3 (176-274)||(2832122-2832219)
chr3 (233-273)||(8355633-8355673)
chr3 (138-273)||(17144471-17144606)
chr3 (102-169)||(25858366-25858434)
chr3 (102-173)||(30739466-30739537)
chr3 (313-412)||(42362816-42362915)
chr3 (176-266)||(36330420-36330509)
chr3 (313-354)||(2832040-2832081)
chr3 (176-232)||(34635623-34635679)
chr3 (313-354)||(44651349-44651390)
chr3 (102-155)||(51194396-51194449)
chr3 (369-413)||(2565897-2565941)
chr3 (221-265)||(3300351-3300395)
[»] chr1 (62 HSPs)
chr1 (75-412)||(27507109-27507447)
chr1 (75-410)||(26344647-26344983)
chr1 (75-410)||(6248228-6248557)
chr1 (79-273)||(34914283-34914476)
chr1 (75-274)||(12973716-12973913)
chr1 (75-412)||(52380329-52380668)
chr1 (75-227)||(40095195-40095346)
chr1 (75-200)||(16063003-16063126)
chr1 (95-273)||(36782110-36782287)
chr1 (102-272)||(25507052-25507221)
chr1 (82-283)||(27350794-27350982)
chr1 (75-274)||(8165280-8165477)
chr1 (80-222)||(3935612-3935753)
chr1 (138-274)||(25559756-25559892)
chr1 (313-412)||(6693700-6693799)
chr1 (102-274)||(44055906-44056079)
chr1 (317-407)||(26063814-26063904)
chr1 (82-266)||(32910115-32910292)
chr1 (102-274)||(35375341-35375512)
chr1 (313-405)||(40094770-40094862)
chr1 (100-273)||(25865752-25865911)
chr1 (103-273)||(19051293-19051466)
chr1 (162-273)||(36797797-36797908)
chr1 (102-196)||(16537637-16537732)
chr1 (313-412)||(18310353-18310452)
chr1 (313-412)||(18834158-18834257)
chr1 (102-203)||(9249903-9250005)
chr1 (102-274)||(11536969-11537144)
chr1 (104-260)||(39158059-39158214)
chr1 (313-410)||(3937147-3937243)
chr1 (125-273)||(11073108-11073256)
chr1 (94-230)||(18310107-18310244)
chr1 (102-213)||(23474901-23475013)
chr1 (187-238)||(6694207-6694258)
chr1 (105-266)||(32937811-32937973)
chr1 (102-219)||(9330563-9330681)
chr1 (102-195)||(39167082-39167176)
chr1 (162-274)||(10847264-10847376)
chr1 (78-221)||(41751298-41751438)
chr1 (313-398)||(50471485-50471570)
chr1 (313-376)||(16063197-16063260)
chr1 (86-141)||(51231923-51231977)
chr1 (79-144)||(25532869-25532933)
chr1 (100-195)||(15881955-15882048)
chr1 (102-142)||(29923166-29923206)
chr1 (104-191)||(50310789-50310877)
chr1 (182-274)||(50951775-50951866)
chr1 (79-134)||(382218-382272)
chr1 (313-412)||(8269032-8269131)
chr1 (315-410)||(9330787-9330882)
chr1 (86-145)||(27770069-27770127)
chr1 (319-410)||(35979874-35979965)
chr1 (176-267)||(35992341-35992431)
chr1 (77-144)||(52828970-52829036)
chr1 (176-274)||(9961922-9962019)
chr1 (231-273)||(16063125-16063167)
chr1 (176-274)||(17989293-17989390)
chr1 (313-412)||(25559614-25559715)
chr1 (313-410)||(25507263-25507360)
chr1 (206-274)||(17652024-17652091)
chr1 (246-274)||(36203186-36203214)
chr1 (102-154)||(39185450-39185502)
[»] chr2 (23 HSPs)
chr2 (102-221)||(5862458-5862577)
chr2 (75-273)||(11678145-11678343)
chr2 (75-273)||(11695623-11695821)
chr2 (82-273)||(44085642-44085832)
chr2 (82-272)||(30514681-30514870)
chr2 (182-273)||(11377398-11377488)
chr2 (75-164)||(41461225-41461314)
chr2 (176-273)||(11051146-11051241)
chr2 (328-412)||(12884775-12884859)
chr2 (89-144)||(27962526-27962580)
chr2 (176-274)||(1331242-1331339)
chr2 (312-410)||(12041190-12041288)
chr2 (313-412)||(13194291-13194388)
chr2 (91-274)||(15320327-15320514)
chr2 (102-142)||(30759490-30759530)
chr2 (102-142)||(30761605-30761645)
chr2 (313-391)||(22014346-22014424)
chr2 (233-274)||(5862395-5862436)
chr2 (182-274)||(17763002-17763092)
chr2 (102-139)||(43452327-43452364)
chr2 (102-142)||(11651030-11651070)
chr2 (102-142)||(28790696-28790736)
chr2 (313-353)||(36075860-36075899)
[»] scaffold0015 (1 HSPs)
scaffold0015 (75-266)||(62561-62752)
[»] scaffold0210 (4 HSPs)
scaffold0210 (207-266)||(20377-20436)
scaffold0210 (207-266)||(28269-28328)
scaffold0210 (315-375)||(20266-20326)
scaffold0210 (315-375)||(28158-28218)
[»] scaffold0001 (1 HSPs)
scaffold0001 (313-359)||(428032-428078)
[»] scaffold0059 (1 HSPs)
scaffold0059 (106-158)||(17787-17839)


Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-153; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 1 - 412
Target Start/End: Original strand, 22298605 - 22299016
Alignment:
Q  1 ttttttgttggaagccattgaggaagtgtgagaaggagagaagaaaggatctgatttgtagaagaggagagaggaaagctaaaacacaacatatttttaa 100  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  22298605 ttttttggtggaagccatcgaggaagtgtgagaaggagagaagaaaggatctgatttttagaagaggagagaggaaagctaaaacacaacatattttcaa 22298704  T
Q  101 gcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagtaatccta 200  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||| || ||||||||||||||||    
T  22298705 gcaatgttttaaatttcatccaacattacaattttattttcatccaacaatgttcccaactacatagaccaaattaaaacgtgaacaaaaagtaatccta 22298804  T
Q  201 tttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttgct------agcaaaaaagaaacttaa 294  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||| ||||||| |      ||||||||||||||||||    
T  22298805 tttgataagaaatacaaaagactaaaa-tttaatcattatcgaagagttcaaggaccacataaataaatttttgatagaaaaagcaaaaaagaaacttaa 22298903  T
Q  295 caacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatatt 394  Q
    ||| ||||         |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  22298904 caagagaa-----aaaattgtcattttgttaaagttttcattgaatttctatgagtattgatttagatgatagatatttaattagtgtttttcttatatt 22298998  T
Q  395 gcggattggtttggtttg 412  Q
     |||||||||||||||||    
T  22298999 acggattggtttggtttg 22299016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 75 - 412
Target Start/End: Complemental strand, 11834399 - 11834060
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||| ||| |||||||||     
T  11834399 aaagctaaaacacaacatattttcaa-caatgttttaaattttatccaacattacagttttattttcatccaacaatgttcccaattacgtagaccaaat 11834301  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||  |||||||||||||||| |||||  ||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||| |||||||    
T  11834300 taaaatctggacaaaaagtaatcatattttgtaagaaatacaaaagactaaaattttaatcattctttaagagttcaagtagcacataaatatatttttg 11834201  T
Q  275 ctag------caaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgataga 368  Q
     |||      |||| |||||||||| ||| ||||          |||||| |||||||||||| |||||||||| ||||||||||| |  |||||||| |    
T  11834200 atagaaaaaacaaagaagaaacttagcaagagaa---aaaaagatgtcatattattaaagtttccattgaatttctatgagtattggtcaagatgatata 11834104  T
Q  369 tatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    |||||||| | |  |||||||||||||||| |||||||||||||    
T  11834103 tatttaattaatatttttcttatattgcggtttggtttggtttg 11834060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 75 - 375
Target Start/End: Complemental strand, 10338742 - 10338435
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    ||||||| ||||||||||||||  || ||||||||| ||||| |||||| |||| |||||||||| ||||| ||||||||| ||||||| ||||| |||     
T  10338742 aaagctataacacaacatatttccaa-caatgttttcaatttcatccaatattagaattttatttccatccaacaatgttcccaactacttagacaaaat 10338644  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||| |||||||||||||||| |||||  ||||| ||||||||||||||||||||| | ||| || |||||||||||||||||||||||||||||||     
T  10338643 taaaacgtggacaaaaagtaatcatattttgtaagagatacaaaagactaaaattttagttattctctaagagttcaagtagcacataaatacatttttt 10338544  T
Q  275 ct----------agcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatga 364  Q
     |          |||||  ||||| |||||||| ||||          ||||||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  10338543 ttttatagaaaaagcaatgaagaatcttaacaagagaa--aaaaaaaatgtcattttattaaagtttccattgaatttttacgagtattgatctagatga 10338446  T
Q  365 tagatatttaa 375  Q
    || ||||||||    
T  10338445 tatatatttaa 10338435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 75 - 412
Target Start/End: Original strand, 20334731 - 20335078
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| |||||| ||||||| ||| | |||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||  | ||  ||||| |||     
T  20334731 aaagttaaaacccaacataatttca-gcaatgttttaaatttgatccaacattacaattttatttttatccaacaatgttctgtattatgtagactaaat 20334829  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaa---------aattttaatcattatcgaagagttcaagtagcacataaat 265  Q
    |||||| || |||||||||||||||||||  ||||||||||||||||||||           |||| |||||| ||  |||||||| ||||||| |||||    
T  20334830 taaaacgtgcacaaaaagtaatcctattttgtaagaaatacaaaagactaattttttttttttttttatcattttccgagagttcatgtagcacgtaaat 20334929  T
Q  266 acatttttgct------agcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgattta 359  Q
    ||||||||| |      |||||||||||||| |||||| ||||          ||||| |||||||||||||||||||||||| ||||||||||| | ||    
T  20334930 acatttttgatcgaaaaagcaaaaaagaaacataacaagagaa----aaaatatgtcaatttattaaagttttcattgaatttctatgagtattggtcta 20335025  T
Q  360 gatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    | ||||| | ||||||| |||| ||||||||||||| || ||| |||||||||    
T  20335026 ggtgatatacatttaattagtgtttttcttatattgtggtttgatttggtttg 20335078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 77 - 412
Target Start/End: Complemental strand, 8568477 - 8568146
Alignment:
Q  77 agctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaata 176  Q
    ||||||||||||||| ||||| || |||| |||||||||| |||||||||||||||||||||| ||||  ||||||||| ||||          ||| ||    
T  8568477 agctaaaacacaacaaattttaaa-caattttttaaatttcatccaacattacaattttatttccatca-acaatgttcccaac----------aaatta 8568390  T
Q  177 aaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttgct 276  Q
    |||| ||| |||||||||||| |||||  |||||||||||||||||| |||||||||||||| || || ||||| ||| | ||||||||||||||||  |    
T  8568389 aaacgtgggcaaaaagtaatcttattttgtaagaaatacaaaagactgaaattttaatcattctctaaaagttctagttgtacataaatacatttttttt 8568290  T
Q  277 a--------gcaaaaaagaaa--cttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgata 366  Q
    |        ||||| ||||||  ||||||||  |||          ||||||||||||||||||| |||||||||| |||||| |||| | | |||||||    
T  8568289 acagaaaaagcaaagaagaaaaacttaacaa--gaaaaaaaaattatgtcattttattaaagtttccattgaatttctatgagcattggtcttgatgata 8568192  T
Q  367 gatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
     ||||||||| |||| |||||||||||||||| |||||||||||||    
T  8568191 tatatttaattagtgtttttcttatattgcggtttggtttggtttg 8568146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 75 - 405
Target Start/End: Original strand, 1812628 - 1812958
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| |||||||||||||||||| || || ||||||| |||| |||||||||||||||||||||| |||   | ||||||| |||| || |||| ||||     
T  1812628 aaagttaaaacacaacatattttcaa-cagtgttttagatttcatccaacattacaattttatttccatga-ataatgttcccaacaacgtagatcaaat 1812725  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||  | |||||||| |||||||||||  ||| |||||  |||| ||||| ||||||||||| || | ||||||||||||  ||||||||  ||||||    
T  1812726 taaaatgtagacaaaaactaatcctatttcgtaataaataagaaaggctaaagttttaatcattctctaggagttcaagtagtgcataaatatctttttg 1812825  T
Q  275 ct------agcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgataga 368  Q
     |      |||||| |||||||| ||||| ||||          ||||||||||||||| |||||||||||||| ||||||||||| | ||||| ||| |    
T  1812826 atagaaaaagcaaagaagaaactcaacaagagaa----aaaatatgtcattttattaaaattttcattgaatttctatgagtattggtctagataatata 1812921  T
Q  369 tatttaataagtgcttttcttatattgcggattggtt 405  Q
    |||||||| |||| |||| ||||||||||| ||||||    
T  1812922 tatttaattagtgttttttttatattgcggtttggtt 1812958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 75 - 270
Target Start/End: Original strand, 7697436 - 7697630
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| |||||||||||||||||| | |||||||| ||||||| ||||||||||||| ||||||||| | |  | ||||||| ||||||| |||||||||     
T  7697436 aaagataaaacacaacatattttca-gcaatgttataaatttcatccaacattacagttttattttgaccaaataatgttcccaactacgtagaccaaat 7697534  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatt 270  Q
    |||||| |||| |||||||||||| | ||  ||||||||  |||||| |||| |||| ||||||  | ||||||||||||| ||||||||||||||    
T  7697535 taaaacgtggaaaaaaagtaatccaactttgtaagaaattaaaaagattaaattttttatcattccctaagagttcaagtaacacataaatacatt 7697630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 75 - 266
Target Start/End: Original strand, 48642935 - 48643125
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||||| ||||||| |||||||  | |||||||||||||||| ||| || |||||||||| ||||||||   ||||||||  |||| |||||||||||      
T  48642935 aaagcttaaacacaccatatttaca-gcaatgttttaaatttcatcaaatattacaatttcattttcattttacaatgtttccaacaacatagaccaagt 48643033  T
Q  175 taaaa-catggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaata 266  Q
    ||||| ||||||||||| |||||| |||||  |||||||||||||||||||| ||||| |||||| || || |  ||||||||||||||||||    
T  48643034 taaaaacatggacaaaacgtaatcatattttgtaagaaatacaaaagactaagatttt-atcattctctaaaaaatcaagtagcacataaata 48643125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 75 - 274
Target Start/End: Complemental strand, 8118216 - 8118018
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||||| |||||||||||||||| | |||||||||||||||| ||| | ||||||||||| ||||||||   | ||||||  |||| |||||||||||      
T  8118216 aaagctgaaacacaacatattttca-gcaatgttttaaatttcatcaagcattacaatttaattttcattttataatgtttccaacaacatagaccaagt 8118118  T
Q  175 t-aaaacatggac-aaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttt 272  Q
    | |||||||| || ||||||||||| |||||  |||||||||||||||| ||| ||||||   |||||| || || ||||||||||||||||||| ||||    
T  8118117 taaaaacatgaacaaaaaagtaatcatattttgtaagaaatacaaaagattaagatttta--tattatctaaaagatcaagtagcacataaatacgtttt 8118020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 103 - 412
Target Start/End: Complemental strand, 27100510 - 27100200
Alignment:
Q  103 aatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagtaatcctatt 202  Q
    |||||||||||||| |||||||||||  |||||||| | ||   | | ||||||||| ||  ||| ||||| |||||||  ||||||||||||  | |||    
T  27100510 aatgttttaaatttcatccaacattattattttattattatataatagtgttctcaattatgtaggccaaattaaaacacagacaaaaagtaactcaatt 27100411  T
Q  203 tgataagaaatacaaaagactaaaa-ttttaatcattatcgaagagttcaagtagcacataaatacatttttgctagcaaaa------aagaaacttaac 295  Q
    |  |||||||||||||||||||||  ||||||| ||| || |||||||||||||||| ||||||| ||||| |  || ||||      ||||||||||||    
T  27100410 ttgtaagaaatacaaaagactaaatgttttaat-attttctaagagttcaagtagcatataaatatattttggaaagaaaaagcaaagaagaaacttaac 27100312  T
Q  296 aacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattg 395  Q
    || | ||           ||||||||||||||||||||||||||||| ||| ||||||| | ||  ||||| ||||||||  |||| |||||||||||||    
T  27100311 aagaaaaaaaaaa-----gtcattttattaaagttttcattgaatttatataagtattggtataagtgatatatatttaaagagtgtttttcttatattg 27100217  T
Q  396 cggattggtttggtttg 412  Q
    ||| |||||||||||||    
T  27100216 cggtttggtttggtttg 27100200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 103 - 412
Target Start/End: Original strand, 27177793 - 27178103
Alignment:
Q  103 aatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagtaatcctatt 202  Q
    |||||||||||||| |||||||||||  |||||||| | ||   | | ||||||||| ||  ||| ||||| |||||||  ||||||||||||  | |||    
T  27177793 aatgttttaaatttcatccaacattattattttattattatataatagtgttctcaattatgtaggccaaattaaaacacagacaaaaagtaactcaatt 27177892  T
Q  203 tgataagaaatacaaaagactaaaa-ttttaatcattatcgaagagttcaagtagcacataaatacatttttgctagcaaaa------aagaaacttaac 295  Q
    |  |||||||||||||||||||||  ||||||| ||| || |||||||||||||||| ||||||| ||||| |  || ||||      ||||||||||||    
T  27177893 ttgtaagaaatacaaaagactaaatgttttaat-attttctaagagttcaagtagcatataaatatattttggaaagaaaaagcaaagaagaaacttaac 27177991  T
Q  296 aacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattg 395  Q
    || | ||           ||||||||||||||||||||||||||||| ||| ||||||| | ||  ||||| ||||||||  |||| |||||||||||||    
T  27177992 aagaaaaaaaaaa-----gtcattttattaaagttttcattgaatttatataagtattggtataagtgatatatatttaaagagtgtttttcttatattg 27178086  T
Q  396 cggattggtttggtttg 412  Q
    ||| |||||||||||||    
T  27178087 cggtttggtttggtttg 27178103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 274
Target Start/End: Original strand, 34751159 - 34751336
Alignment:
Q  95 ttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagta 194  Q
    |||| ||||||||||||||||| || ||||||||||||||||||||||||| ||||| |||  |||||  | |||| || | |||| |||||||||||||    
T  34751159 ttttcagcaatgttttaaatttcatacaacattacaattttattttcatccaacaatattccaaactatgtggacc-aacttaaacttggacaaaaagta 34751257  T
Q  195 atcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    || | ||||  |||| ||||||||| ||| || |||| ||||||  | ||||||||||||| | ||||||||||||||||    
T  34751258 attcaatttcgtaaggaatacaaaa-actgaattttttatcattccccaagagttcaagtaacgcataaatacatttttg 34751336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 75 - 231
Target Start/End: Complemental strand, 35820007 - 35819851
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaa- 173  Q
    |||| |||||||||| ||||||| | |||||||||||||||| |||||||||||| ||||||||||||||  ||||||| | ||||||| || ||||||     
T  35820007 aaagataaaacacaatatattttca-gcaatgttttaaatttcatccaacattacgattttattttcatcaaacaatgtacccaactacgtacaccaaag 35819909  T
Q  174 ataaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaatttt 231  Q
     | |||| |||||||||||||||   ||||  ||| || |||||||||||||| ||||    
T  35819908 tttaaacgtggacaaaaagtaattaaattttgtaaaaattacaaaagactaaattttt 35819851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 82 - 266
Target Start/End: Original strand, 37375482 - 37375665
Alignment:
Q  82 aaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aaaac 180  Q
    |||||||||||||||| || ||||||||||||||| ||| || |||||||||| ||||||||   ||||||||  |||| |||||||||||  | |||||    
T  37375482 aaacacaacatattttcaa-caatgttttaaatttcatcaaatattacaatttcattttcattttacaatgtttccaacaacatagaccaagttaaaaac 37375580  T
Q  181 atggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaata 266  Q
    ||||||||||  |||| ||||||  | |||||| ||||||||||| |||||  ||||| || || | |||||||||| ||||||||    
T  37375581 atggacaaaatataattctattttgttagaaatgcaaaagactaagatttt-ctcattctctaaaatttcaagtagcgcataaata 37375665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 75 - 273
Target Start/End: Complemental strand, 31287700 - 31287515
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| |||| ||||||||||||| | |||| |||||||||||||||||||||||||||| ||||||||||| ||||| |||  || |||               
T  31287700 aaagttaaaccacaacatattttca-gcaacgttttaaattttatccaacattacaattgtattttcatccaacaatattccaaattacg---------- 31287612  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
      |||| |  |||| ||||||||||||||  | ||||||||||||||||| | |||| |||| | || ||||||| |||||||||||||||||||||||    
T  31287611 --aaacgttcacaacaagtaatcctattttgtcagaaatacaaaagactacattttttatcaatctctaagagttaaagtagcacataaatacattttt 31287515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 101 - 179
Target Start/End: Original strand, 16359334 - 16359412
Alignment:
Q  101 gcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaa 179  Q
    |||||||||||||||||||||||||||| ||||| |||||||||| ||||| ||| || | |||||||||||| |||||    
T  16359334 gcaatgttttaaattttatccaacattataatttcattttcatccaacaatattcccatcaacatagaccaaattaaaa 16359412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 102 - 410
Target Start/End: Original strand, 2734523 - 2734809
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagtaatcctat 201  Q
    ||||| ||||||||| |||||||||||||||||||||||||            || ||| |||||||||||| ||||| ||||| ||||||||||| |||    
T  2734523 caatgctttaaatttcatccaacattacaattttattttca------------ctaaacaacatagaccaaattaaaatatggataaaaagtaatcttat 2734610  T
Q  202 ttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttgctagcaaaaaagaaacttaacaacaga 301  Q
    |   ||||||||  |||||||||| ||||| |||||| || || ||||||| |||||| |||||| ||||||       ||||||||||||||||| |||    
T  2734611 tatgtaagaaatgtaaaagactaagatttt-atcattctctaaaagttcaattagcacgtaaatatattttt------taaaaagaaacttaacaagaga 2734703  T
Q  302 agnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggatt 401  Q
    |          ||||||||||| ||||| |||||||| ||| ||||||||||| | ||||||| | | ||||||| ||   ||||||| | ||| || ||    
T  2734704 a---aaaaatatgtcattttataaaagtattcattgagtttctatgagtattggtctagatgacatagatttaattaggatttttcttgtgttgtggttt 2734800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 26208984 - 26208885
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    ||||||||||| ||||||||| |||| ||| ||||||||||| ||||||||| | ||||||||  |||| ||||||||  |||||| ||||||| |||||    
T  26208984 tgtcattttataaaagttttcgttgattttctatgagtattggtttagatgacatatatttaactagtgtttttcttacgttgcggcttggtttagtttg 26208885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 314 - 412
Target Start/End: Complemental strand, 31287472 - 31287374
Alignment:
Q  314 gtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    ||||||||||||| | ||  ||||||||   |||||||||| ||||| ||||| ||||||||| |||| |||||||||||||||| ||| |||||||||    
T  31287472 gtcattttattaatgattctattgaattccaatgagtattggtttaggtgatacatatttaattagtgtttttcttatattgcggtttgatttggtttg 31287374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 274
Target Start/End: Original strand, 23729549 - 23729717
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagtaatcctat 201  Q
    ||||||||||||||| |||||| |||||||||| |||||  |   | ||| |||  |||||||| ||||||| | |||| || ||||||||||||| |||    
T  23729549 caatgttttaaatttcatccaatattacaatttcatttt--ttaaaaaat-ttccaaactacatggaccaaatttaaacgtgaacaaaaagtaatcatat 23729645  T
Q  202 ttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||  |||||||||||||||||||| ||||||| ||||  | || | ||||||||||  || ||||||||||||    
T  23729646 tttgtaagaaatacaaaagactaagattttaa-catttactaaaaattcaagtagcgtatgaatacatttttg 23729717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 409
Target Start/End: Original strand, 25007648 - 25007742
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggt 409  Q
    ||||||||||||||| |||||||| ||||| |||||||||||   ||||||||  ||||||||| | || |||||||||||||| | ||||||||||    
T  25007648 tgtcattttattaaaattttcatttaatttctatgagtattggcctagatgat--atatttaattaatgtttttcttatattgcagtttggtttggt 25007742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 273
Target Start/End: Original strand, 30855251 - 30855440
Alignment:
Q  83 aacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacat 182  Q
    ||||||||||||||| | |||||||||||||||| ||| ||||||| ||||| | ||| ||   ||||||||  |||| |||||||||||| ||||| ||    
T  30855251 aacacaacatattttca-gcaatgttttaaatttgatcaaacattagaatttaaattttattttacaatgtttccaacaacatagaccaaattaaaa-at 30855348  T
Q  183 g--gacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    |  |||||||| ||||| |||||  | |||||| ||||| | ||| ||||| |||||| || || ||||| |||| ||||||||||| |||||    
T  30855349 gcagacaaaaaataatcatattttgtgagaaatgcaaaacattaagatttt-atcattctctaaaagttcgagtaacacataaatacgttttt 30855440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 75 - 179
Target Start/End: Complemental strand, 6880031 - 6879928
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| |||||||||||||||||| || ||||||||||||||| ||||||||||| ||||  |||||||||  ||||| ||| |||| | ||| ||||||     
T  6880031 aaagttaaaacacaacatattttcaa-caatgttttaaatttcatccaacattaaaattaaattttcatctaacaatattcccaacaaaataaaccaaat 6879933  T
Q  175 taaaa 179  Q
    |||||    
T  6879932 taaaa 6879928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 30079519 - 30079452
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcat 143  Q
    ||||||||||||||| ||||||| | |||||||||||||||||||| || |||||||||| ||||||||    
T  30079519 aaagctaaaacacaatatattttca-gcaatgttttaaattttatcaaatattacaatttcattttcat 30079452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 412
Target Start/End: Original strand, 7697678 - 7697782
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattg----atttagatgatagatatttaa-taagtgcttttcttatattgcggattggtttg 407  Q
    |||| ||||||||||||||||||||| ||| |||||||||||    || ||  ||||| |||||||| |||||| ||||||||||||| || ||||||||    
T  7697678 tgtctttttattaaagttttcattgagtttctatgagtattggtctatgtatgtgatatatatttaattaagtgtttttcttatattgtggtttggtttg 7697777  T
Q  408 gtttg 412  Q
    |||||    
T  7697778 gtttg 7697782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 297
Target Start/End: Original strand, 23675626 - 23675746
Alignment:
Q  176 aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttgc 275  Q
    ||||| |||||||||||||||||||||   ||| ||||  |||||| ||| |||||| ||||| || || ||||||| ||||| |||||||||||||||     
T  23675626 aaaacgtggacaaaaagtaatcctattatgtaataaatgtaaaagattaagatttta-tcattctctaaaagttcaaatagcatataaatacatttttga 23675724  T
Q  276 tagcaaaaaagaaacttaacaa 297  Q
     |  |||||| |||||||||||    
T  23675725 aaagaaaaaaaaaacttaacaa 23675746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 410
Target Start/End: Original strand, 27456714 - 27456811
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtt 410  Q
    ||||||||||  |||||||||||||| ||| ||||||||||| | |||  || | | ||||||| |||| ||||||||| |||||| |||||||||||    
T  27456714 tgtcattttacaaaagttttcattgagtttctatgagtattggtctaggagacatagatttaattagtgtttttcttatgttgcggtttggtttggtt 27456811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 412
Target Start/End: Original strand, 35495799 - 35495893
Alignment:
Q  318 ttttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    |||||| ||||||| ||||||  || ||  ||||||||| ||| ||| | || |||||| |||| |||||||||||||||| |||||||||||||    
T  35495799 ttttataaaagtttccattgagattctaaaagtattgatctaggtgacatatgtttaattagtgtttttcttatattgcggtttggtttggtttg 35495893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 315 - 412
Target Start/End: Complemental strand, 8117976 - 8117879
Alignment:
Q  315 tcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    ||||||||| | ||||| |||||| ||| ||||||||||| ||||| ||||| || |||||| |  | ||||||||| |||||| ||| |||||||||    
T  8117976 tcattttataagagtttccattgagtttatatgagtattggtttaggtgatacatttttaattaacgtttttcttatgttgcggtttgatttggtttg 8117879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 138 - 266
Target Start/End: Complemental strand, 22701209 - 22701082
Alignment:
Q  138 tttcatccgacaatgttctcaactacatagaccaaa-ataaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatca 236  Q
    |||||||| ||| | || |||||||||||||||||| | ||||| || ||||||||||||| |||||  |||||||| ||||||| ||| ||||| || |    
T  22701209 tttcatccaacatttttttcaactacatagaccaaataaaaaacgtgcacaaaaagtaatcatattt-ttaagaaatgcaaaagaataagatttt-atta 22701112  T
Q  237 ttatcgaagagttcaagtagcacataaata 266  Q
    || || || |||| |||||||| |||||||    
T  22701111 ttctctaaaagtttaagtagcagataaata 22701082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 43908846 - 43908895
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaat 151  Q
    |||||||| |||||| ||| |||||||||||||||||||||||| |||||    
T  43908846 caatgtttcaaatttgatcaaacattacaattttattttcatccaacaat 43908895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 273
Target Start/End: Original strand, 46147459 - 46147555
Alignment:
Q  176 aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    ||||| ||||||||||||||| |||||   ||||||||  |||||||||| ||||| || ||| || || |||||||| |||||||||||| ||||||    
T  46147459 aaaacgtggacaaaaagtaattctattatgtaagaaatgtaaaagactaagatttt-attattgtctaaaagttcaagcagcacataaatatattttt 46147555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 147 - 271
Target Start/End: Original strand, 49012268 - 49012392
Alignment:
Q  147 acaatgttctcaactacatagaccaaaataaaa-catggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaag 245  Q
    ||||||||  ||||||||| ||| ||| ||||| | ||||||||||||||| ||||||  |||||||| |||||||  || ||||| |||||| | |||     
T  49012268 acaatgtttccaactacatggactaaattaaaaacgtggacaaaaagtaattctattttgtaagaaatgcaaaagaacaagatttt-atcattcttgaaa 49012366  T
Q  246 agttcaagtagcacataaatacattt 271  Q
    ||||||| ||| ||||||||| ||||    
T  49012367 agttcaaatagaacataaatatattt 49012392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 33434325 - 33434405
Alignment:
Q  142 atccgacaatgttctcaactacatagaccaaaat-aaaacatggacaaaaagtaatcctatttgataagaaatacaaaaga 221  Q
    |||| |||||||| |||||||||||||||||| | |||||||| ||||||| |||| ||||||  ||| |||| |||||||    
T  33434325 atccaacaatgttttcaactacatagaccaaattaaaaacatgcacaaaaaataattctattttgtaacaaatgcaaaaga 33434405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 412
Target Start/End: Original strand, 40849245 - 40849344
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    |||| |||||| ||||||| |||||| ||| ||||||||||| | | ||||| | | ||||||| || | | ||||||| |||||| |||||||||||||    
T  40849245 tgtcgttttataaaagtttccattgagtttctatgagtattggtctcgatgacatagatttaattagagttgttcttatgttgcggtttggtttggtttg 40849344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 411
Target Start/End: Complemental strand, 6879793 - 6879695
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggttt 411  Q
    ||||||||||||||||||||||||||  || ||||||||||  | ||| ||||| || |||||| |||  ||||||||  |||  | ||||||||||||    
T  6879793 tgtcattttattaaagttttcattgagcttctatgagtattagtctaggtgatatatgtttaattagtatttttcttaagttgtagtttggtttggttt 6879695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 202
Target Start/End: Original strand, 32237839 - 32237941
Alignment:
Q  102 caatgttttaaa-ttttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aaaacatggacaaaaagtaatcct 199  Q
    |||||||||||| ||||||| || | |||||||| |||||||||| ||||||||   ||  |||||||||||| | ||||| ||||||||| |||||| |    
T  32237839 caatgttttaaatttttatctaataatacaatttcattttcatccaacaatgtttctaataacatagaccaaattaaaaacgtggacaaaatgtaatcat 32237938  T
Q  200 att 202  Q
    |||    
T  32237939 att 32237941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 412
Target Start/End: Original strand, 34751383 - 34751476
Alignment:
Q  318 ttttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    |||||||||||||| |||||| ||||| | ||||||| | | | ||||| ||||||||| |||| |||||  ||||||||| ||| |||||||||    
T  34751383 ttttattaaagtttccattgagtttttttaagtattggtct-ggtgatatatatttaattagtgtttttcgaatattgcggtttgatttggtttg 34751476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 23032943 - 23033026
Alignment:
Q  189 aaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||||| |||||   ||||||||| |||||| ||| |||||| ||||| || || ||||||||||||||||||||| |||||||    
T  23032943 aaagtaattctattatgtaagaaatataaaagattaagatttta-tcattctctaa-agttcaagtagcacataaatatatttttg 23033026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 16535657 - 16535617
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttca 142  Q
    ||||||||||||||| |||||| |||||||||| |||||||    
T  16535657 caatgttttaaatttcatccaaaattacaatttcattttca 16535617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 16630005 - 16630045
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttca 142  Q
    ||||||||||||||| |||||| |||||||||| |||||||    
T  16630005 caatgttttaaatttcatccaaaattacaatttcattttca 16630045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 21237671 - 21237631
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttca 142  Q
    ||||||||| ||||| ||||||||||||||||| |||||||    
T  21237671 caatgtttttaatttcatccaacattacaatttaattttca 21237631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 397
Target Start/End: Original strand, 23675771 - 23675839
Alignment:
Q  329 ttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcg 397  Q
    |||||||||| ||| ||||||||||  ||||| ||| | | ||||||| |||| |||||||||||||||    
T  23675771 ttttcattgagtttctatgagtattagtttaggtgacataaatttaattagtgtttttcttatattgcg 23675839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 36550652 - 36550692
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttca 142  Q
    |||||||| |||||| ||| |||||||||||||||||||||    
T  36550652 caatgtttaaaatttcatctaacattacaattttattttca 36550692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 274
Target Start/End: Original strand, 43202732 - 43202760
Alignment:
Q  246 agttcaagtagcacataaatacatttttg 274  Q
    |||||||||||||||||||||||||||||    
T  43202732 agttcaagtagcacataaatacatttttg 43202760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 47483807 - 47483847
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttca 142  Q
    |||| |||||||||| ||||||||||| |||||||||||||    
T  47483807 caatattttaaatttcatccaacattaaaattttattttca 47483847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 47646657 - 47646590
Alignment:
Q  74 gaaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttca 142  Q
    ||||| || |||||||||||| | || ||||||||||||||||   ||||||||| |||||||||||||    
T  47646657 gaaagttacaacacaacatatatcta-gcaatgttttaaatttcgaccaacattaaaattttattttca 47646590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 4e-79; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 75 - 411
Target Start/End: Original strand, 8484820 - 8485163
Alignment:
Q  75 aaagctaaaacacaa-catatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaa 173  Q
    |||| |||||||||| |||||||| | |||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||| ||| |||||||||    
T  8484820 aaagttaaaacacaaacatattttca-gcaatgttttaacttttatccaacattacaattttatttccatccaacaatattctcaaatacgtagaccaaa 8484918  T
Q  174 ataaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
     ||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| || |||||||||||||||| ||||||||||| ||    
T  8484919 ttaaaacatggacaaaaagtaatcatattttataagaaatgcaaaagactaaaattttaatcattctctaagagttcaagtagcatataaatacattatt 8485018  T
Q  274 gct------agcaaaaaagaaacttaacaacag-aagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgata 366  Q
    | |      |||||| |||||||||||||| || ||          ||||||||||||||||||| |||||||||| ||||||||||| | |||| ||||    
T  8485019 gatagaaaaagcaaagaagaaacttaacaagagaaaaaaaaaacaatgtcattttattaaagtttacattgaatttctatgagtattggtctagaggata 8485118  T
Q  367 gatatttaataagtgcttttcttatattgcggattggtttggttt 411  Q
     |||||| || |||| |||||||||||||||| ||||||||||||    
T  8485119 tatatttgattagtgtttttcttatattgcggtttggtttggttt 8485163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 75 - 412
Target Start/End: Original strand, 4642595 - 4642933
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||||||||| |||||||||||||| ||| |||||||||||| ||||||||||| ||||||||||||||   |||| |||| |||| || |||||||||     
T  4642595 aaagctaaaa-acaacatattttta-gcagtgttttaaatttcatccaacattataattttattttcataaaacaaagttcccaacaacgtagaccaaat 4642692  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||| || |||| |||| ||||||||||||||||||||||    
T  4642693 taaaacgtggacaaaaagtaatcctattttataagaaatacagaagacaaaaattttaatcattctctaagaattcatgtagcacataaatacatttttg 4642792  T
Q  275 ct------agcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgataga 368  Q
     |      |||||| |||||||||||||| ||||            || |||||||||||||| ||||| |||| ||||||||||| | || ||| || |    
T  4642793 atagaaaaagcaaagaagaaacttaacaagagaaaaaaaaaaa---tctttttattaaagtttccattgtatttctatgagtattggtctaaatggtata 4642889  T
Q  369 tatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    |||||||| |||  ||||| |||||||||| |||| ||||||||    
T  4642890 tatttaattagtatttttcatatattgcggtttggattggtttg 4642933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 75 - 412
Target Start/End: Original strand, 21069203 - 21069544
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgtttt-aaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaa 173  Q
    ||||||||||||| ||||||||| || ||||||||| |||||| |||||||||||||||||||||||||||| ||| ||| | ||||||| |||||||||    
T  21069203 aaagctaaaacactacatattttcaa-caatgtttttaaatttaatccaacattacaattttattttcatccaacagtgtccccaactacgtagaccaaa 21069301  T
Q  174 ataaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
     |||||  |||||||||||||||| ||||   |||||||| |||||||||||| |||| |||||| || |||||||||||||| ||||||||||||||||    
T  21069302 ttaaaatgtggacaaaaagtaatcatattatgtaagaaatgcaaaagactaaattttttatcattctctaagagttcaagtagtacataaatacattttt 21069401  T
Q  274 g------ctagcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatag 367  Q
    |        |||||| |||||||||||||| ||||          |||||||||||||||||||||||| | ||| || |||||||| | ||  ||| |     
T  21069402 gaaacaaaaagcaaagaagaaacttaacaagagaa--aaaacatatgtcattttattaaagttttcattaagtttatacgagtattggtgtaagtgacat 21069499  T
Q  368 atatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    ||||||||| |||| ||||||||||| |||| |||||||||||||    
T  21069500 atatttaattagtgtttttcttatatcgcggtttggtttggtttg 21069544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 75 - 273
Target Start/End: Complemental strand, 23625834 - 23625637
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| |||||||||||||||||| || ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| ||  ||| |||||||||     
T  23625834 aaagttaaaacacaacatattttcaa-caatgttttaaatttaatccaacattataattttattttcatccaacaatgttcacacatacgtagaccaaat 23625736  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    |||||| ||||||||||||||| |||||| |||||||||||| |||||||||| | ||||||| ||  |||||||||||||||| ||||||||||||||    
T  23625735 taaaacgtggacaaaaagtaattctattttataagaaatacataagactaaaaatgtaatcatcatttaagagttcaagtagcagataaatacattttt 23625637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 75 - 274
Target Start/End: Original strand, 27743348 - 27743546
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||||||||||| | |||||||| || |||||||| |||||| ||||||||||||||||||||||||| || ||||||||| ||||||  ||||| |||     
T  27743348 aaagctaaaacaaagcatattttcaa-caatgtttaaaatttcatccaacattacaattttattttcagccaacaatgttcccaactaggtagactaaat 27743446  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
      ||||  |||||||||||||||||||||  |||||||||||||||| |||||||||||||||| || |||||||||||||| |||||||||||||||||    
T  27743447 ataaacgcggacaaaaagtaatcctattttgtaagaaatacaaaagattaaaattttaatcattctctaagagttcaagtagtacataaatacatttttg 27743546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 102 - 412
Target Start/End: Complemental strand, 1564974 - 1564659
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagtaatcctat 201  Q
    ||||||||||||||| ||| |||||||||||||||||| ||| | ||||||||| ||||||   |||||||| |||||  |||||||||| |||||||||    
T  1564974 caatgttttaaatttcatctaacattacaattttatttccattcaacaatgttcccaactatgcagaccaaattaaaatgtggacaaaaaataatcctat 1564875  T
Q  202 ttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttgct------agcaaaaaagaaacttaac 295  Q
    ||  |||||||||||||||| |||||||||||||||| |   ||| || |||||||||||||||||||||||| |      | |||| |||||| | |||    
T  1564874 tttgtaagaaatacaaaagagtaaaattttaatcattctttgagattttaagtagcacataaatacatttttgatataaaaaacaaagaagaaattaaac 1564775  T
Q  296 aacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattg 395  Q
       | |||         ||||||||||||||||||||| |||||||| ||||||||||| | ||||||||| ||||||||| | || |||||||||||||    
T  1564774 ttaacaagagaaaaaaatgtcattttattaaagttttc-ttgaatttatatgagtattggtctagatgatatatatttaattattgtttttcttatattg 1564676  T
Q  396 cggattggtttggtttg 412  Q
    | | |||||||||||||    
T  1564675 cagtttggtttggtttg 1564659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 81 - 412
Target Start/End: Complemental strand, 23449914 - 23449582
Alignment:
Q  81 aaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaac 180  Q
    |||||| ||||||||||||| ||||||||||||||| ||| ||||||| ||||||||||  |||   |||||||| ||||||| |||| |||| ||||||    
T  23449914 aaaacagaacatatttttaa-caatgttttaaatttcatcaaacattataattttatttctatctaccaatgttcccaactacgtagaacaaattaaaac 23449816  T
Q  181 atggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttgctag-- 278  Q
     |||||||||| |||||||||||  ||| |||| ||||| |||||||||||||| ||| || |||||||||||||||||||||||||||||||| |||      
T  23449815 gtggacaaaaaataatcctattttgtaaaaaattcaaaaaactaaaattttaataattttctaagagttcaagtagcacataaatacatttttgatagat 23449716  T
Q  279 ----caaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatattta 374  Q
        |||| |||||||||||||  | ||          | |||||||||||||| ||||||||||| |  |||||||||| | |||||||||  ||||||    
T  23449715 aaaacaaagaagaaacttaacataacaa---aataatatttcattttattaaag-tttcattgaatctcaatgagtattggtctagatgatatgtattta 23449620  T
Q  375 ataagtgcttttcttatattgcggattggtttggtttg 412  Q
    || | || |||||||||||||||  ||| |||||||||    
T  23449619 attaatgtttttcttatattgcgatttgatttggtttg 23449582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 95 - 412
Target Start/End: Original strand, 20986565 - 20986885
Alignment:
Q  95 ttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagta 194  Q
    |||| ||||||||||||||||| ||||||||||| |||||||||| ||||| || |||||| ||||||| ||||||||| | ||||  ||||||||||||    
T  20986565 ttttcagcaatgttttaaatttcatccaacattataattttatttccatccaacgatgttcccaactacgtagaccaaatttaaacgcggacaaaaagta 20986664  T
Q  195 atc-ctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttgctagcaaaa------aaga 287  Q
    |||  | |||  ||||||||||||||||||||||  ||  | ||| || |||||||||||||  ||||||||| |||||||  || ||||      ||||    
T  20986665 atcatttttttgtaagaaatacaaaagactaaaaaatttgttattctctaagagttcaagtaatacataaataaatttttgaaagaaaaaggaaagaaga 20986764  T
Q  288 aacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttc 387  Q
    |||||||||| ||||          |||||||||||||||||||  ||||| ||| ||||||||||| |  |  ||||| ||||||||| |||| |||||    
T  20986765 aacttaacaagagaa----aaaatatgtcattttattaaagtttctattgagtttatatgagtattggtccaagtgatatatatttaattagtgtttttc 20986860  T
Q  388 ttatattgcggattggtttggtttg 412  Q
    ||||||||||| |||||||||||||    
T  20986861 ttatattgcggtttggtttggtttg 20986885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 77 - 410
Target Start/End: Original strand, 29232898 - 29233233
Alignment:
Q  77 agctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaata 176  Q
    |||||||| |||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||| ||||||||  ||||||| ||||||||| |     
T  29232898 agctaaaaaacaacatattttcaa-caatgttttaaatttcatccaacattacaattttattttcatccaacaatgtttccaactacgtagaccaaattt 29232996  T
Q  177 aaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaa--attttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||   ||||||||||||||| |||||  ||||||||| ||||||||| |   |||| |||||| || ||||||| ||| |  ||||||||||||||  |    
T  29232997 aaa-gcggacaaaaagtaatcttattttctaagaaatataaaagactatattttttttatcattctctaagagtttaagcactacataaatacatttagg 29233095  T
Q  275 ctag------caaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgataga 368  Q
      ||      |||| ||||||||||||||  |||          |||||||||||||||||||||||||| ||| |||||||||||||  |  | ||| |    
T  29233096 aaagaaaaatcaaagaagaaacttaacaaaggaa----aaaatatgtcattttattaaagttttcattgagtttctatgagtattgatccatgtaatata 29233191  T
Q  369 tatttaataagtgcttttcttatattgcggattggtttggtt 410  Q
    |||||||| |||| ||||||||||||| || || ||||||||    
T  29233192 tatttaattagtgtttttcttatattggggttttgtttggtt 29233233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 80 - 232
Target Start/End: Original strand, 15724044 - 15724197
Alignment:
Q  80 taaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aaa 178  Q
    ||||||||||||||||||| ||||||||||||||||| ||| || |||||||||||||||||||   ||||||||  |||| |||||||||||  | |||    
T  15724044 taaaacacaacatatttttcagcaatgttttaaatttcatcaaatattacaattttattttcattttacaatgtttccaacaacatagaccaagttaaaa 15724143  T
Q  179 acatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaatttta 232  Q
    |||||||||||| ||||||||||||  |||||||| ||||||||||| ||||||    
T  15724144 acatggacaaaatgtaatcctattttttaagaaatgcaaaagactaagatttta 15724197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 118 - 258
Target Start/End: Complemental strand, 48653743 - 48653602
Alignment:
Q  118 atccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaa-catggacaaaaa-gtaatcctatttgataagaaatac 215  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||| | |||||||||| |||||| |||||  | ||||||||    
T  48653743 atccaacattacaattttattttcatccaacaatgtt-tcaactacatagaccaaattaaaaacgtggacaaaaaagtaatcttattttgttagaaatac 48653645  T
Q  216 aaaagactaaaattttaatcattatcgaagagttcaagtagca 258  Q
    |||||||||| ||||| ||||||||  |||| |||||||||||    
T  48653644 aaaagactaagatttttatcattatgtaagaattcaagtagca 48653602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 80 - 274
Target Start/End: Original strand, 53934801 - 53934993
Alignment:
Q  80 taaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaa 179  Q
    ||||| |||||||||||| |  ||||||||||||||| ||| |||   ||||||| ||| |||||| ||||| |||||||||||||||||||||  ||||    
T  53934801 taaaatacaacatattttgac-caatgttttaaatttcatctaacggaacaatttcattatcatccaacaatattctcaactacatagaccaaataaaaa 53934899  T
Q  180 catggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
      |||| ||||||||||| ||||| |||||| |  ||||||| ||| ||||| ||||| ||| || ||||||||||| |||||||||||||||||    
T  53934900 tgtggataaaaagtaatcatattttataagataggcaaaagattaagatttt-atcatcatctaaaagttcaagtagtacataaatacatttttg 53934993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 182 - 412
Target Start/End: Original strand, 41325649 - 41325881
Alignment:
Q  182 tggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttgctag--- 278  Q
    |||||||||||||||| ||||| |||| ||||||||||||||  |||||| |||||| || |||||||||||||| |||||||||||||||||  ||       
T  41325649 tggacaaaaagtaatcttattttataaaaaatacaaaagactcgaatttttatcattctctaagagttcaagtagtacataaatacatttttgaaagaaa 41325748  T
Q  279 ---caaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaa 375  Q
       |||| |||||||||||||| ||||          ||||||||||||||||||| |||||| ||| |  |||||||| |  |  ||||| |||| |||    
T  41325749 aaacaaagaagaaacttaacaaaagaa----aaaatatgtcattttattaaagtttccattgagtttattcgagtattggtcaaagtgatatatatctaa 41325844  T
Q  376 taagtgcttttcttatattgcggattggtttggtttg 412  Q
    | |||| |||||||||||||||| |||||||||||||    
T  41325845 ttagtgtttttcttatattgcggtttggtttggtttg 41325881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 75 - 203
Target Start/End: Original strand, 45464342 - 45464469
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||||||||||| |||||||||||| |||||||||||||||| ||| |||||| ||||||||||| |||   | ||||||| |||| || |||||||||     
T  45464342 aaagctaaaacataacatattttta-gcaatgttttaaatttcatcaaacattgcaattttatttccataacaaaatgttcccaaccacgtagaccaaat 45464440  T
Q  175 taaaacatggacaaaaagtaatcctattt 203  Q
    |||||||| ||||||||||||||||||||    
T  45464441 taaaacatagacaaaaagtaatcctattt 45464469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 412
Target Start/End: Original strand, 45464542 - 45464641
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| |||  |||||||||||||||| ||| |||||||||    
T  45464542 tgtcattttattaaagttttcattgaatttctatgagtattggtttagattatatatatttaatcagtatttttcttatattgcggtttgatttggtttg 45464641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 223
Target Start/End: Complemental strand, 23120182 - 23120033
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| ||||||||||||||||||| |||||||||||||| || ||| || |||||||||||||||||||   ||||||||  |||| |||||||||||      
T  23120182 aaagttaaaacacaacatatttttcagcaatgttttaaacttcatcaaatattacaattttattttcattttacaatgtttccaacaacatagaccaagt 23120083  T
Q  175 t-aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagact 223  Q
    | ||||||||||||||| ||||| ||||||  || ||||| |||||||||    
T  23120082 taaaaacatggacaaaacgtaattctattttctatgaaatgcaaaagact 23120033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 103 - 273
Target Start/End: Original strand, 35014448 - 35014619
Alignment:
Q  103 aatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aaaacatggacaaaaagtaatcctat 201  Q
    |||||||||||||| ||| ||||||||||||||||||| |||| | ||||||| |||||||||| | |||  | ||||| |||||||||| ||||| |||    
T  35014448 aatgttttaaatttcatcgaacattacaattttatttttatccaataatgttcgcaactacataaatcaagttaaaaacgtggacaaaaaataatcttat 35014547  T
Q  202 ttgataagaaatac-aaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    ||  |||||||| | |||| ||||||||||| |||||| || |  |||| |||||||||||||||||||||||    
T  35014548 tttgtaagaaatgcaaaaaaactaaaatttt-atcattctctagaagtttaagtagcacataaatacattttt 35014619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 75 - 221
Target Start/End: Original strand, 45983531 - 45983678
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| ||||||||||||||||||| |||||| |||||||||| ||| || |||| ||||||||||||||   ||||||||  |||| |||||||||||      
T  45983531 aaagttaaaacacaacatatttttcagcaatattttaaatttcatcaaatattaaaattttattttcattttacaatgtttccaacaacatagaccaagt 45983630  T
Q  175 t-aaaacatggacaaaaagtaatcctatttgataagaaatacaaaaga 221  Q
    | |||||||||||||||  |||||||||||  |||||||| |||||||    
T  45983631 taaaaacatggacaaaacataatcctattttctaagaaatgcaaaaga 45983678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 80 - 356
Target Start/End: Original strand, 6102040 - 6102316
Alignment:
Q  80 taaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaa-ataaa 178  Q
    |||||||||||||||||| || | ||||||||||||| ||||||||||||||||| |||   |||| ||||| ||| |||| |||||||| ||| | |||    
T  6102040 taaaacacaacatattttcaa-cgatgttttaaatttcatccaacattacaatttcattaatatccaacaatattcccaaccacatagactaaataaaaa 6102138  T
Q  179 acatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttgct-- 276  Q
    |  ||||||| ||||||||||||||  || ||||| ||||| ||||| ||||||| |||| |  || ||||| ||||||| |||||||| |||||  |      
T  6102139 atgtggacaataagtaatcctattttgtatgaaatgcaaaaaactaagattttaa-cattctttaaaagttccagtagcaaataaatacttttttaatat 6102237  T
Q  277 ----agcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgat 356  Q
        ||| || |||||||||||||  ||||          ||||||||||| ||||||||||||||||||||||||||||||||    
T  6102238 aaaaagcgaagaagaaacttaacacgagaa-----aaaaatgtcattttataaaagttttcattgaatttttatgagtattgat 6102316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 75 - 266
Target Start/End: Complemental strand, 19753437 - 19753246
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaa- 173  Q
    |||| |||||||||| ||||||| | |||||||||||||||| |||||||||||| ||||||||||||||  ||||||| | ||||||| || ||||||     
T  19753437 aaagataaaacacaatatattttca-gcaatgttttaaatttcatccaacattacgattttattttcatcaaacaatgtacccaactacgtacaccaaag 19753339  T
Q  174 ataaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaata 266  Q
     | |||| |||||||||||||||   ||||  ||| ||  ||||||||||||| |||| |||||| |  |||||||||| || |||| |||||    
T  19753338 tttaaacgtggacaaaaagtaattaaattttgtaaaaatcacaaaagactaaattttttatcattctttaagagttcaaataccacaaaaata 19753246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 75 - 266
Target Start/End: Original strand, 19786369 - 19786560
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaa- 173  Q
    |||| |||||||||| ||||||| | |||||||||||||||| |||||||||||| ||||||||||||||  ||||||| | ||||||| || ||||||     
T  19786369 aaagataaaacacaatatattttca-gcaatgttttaaatttcatccaacattacgattttattttcatcaaacaatgtacccaactacgtacaccaaag 19786467  T
Q  174 ataaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaata 266  Q
     | |||| |||||||||||||||   ||||  ||| ||  ||||||||||||| |||| |||||| |  |||||||||| || |||| |||||    
T  19786468 tttaaacgtggacaaaaagtaattaaattttgtaaaaatcacaaaagactaaattttttatcattctttaagagttcaaataccacaaaaata 19786560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 182 - 412
Target Start/End: Original strand, 28148019 - 28148250
Alignment:
Q  182 tggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttgct----- 276  Q
    |||| ||||||||||| |||||  |||||||| |||||||||||||||||||| ||| ||  ||||| ||||||||||||||||||||||||| |         
T  28148019 tggataaaaagtaatcatattttgtaagaaattcaaaagactaaaattttaataattctctgagagtgcaagtagcacataaatacatttttgatagaaa 28148118  T
Q  277 -agcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaa 375  Q
     |||||| |||||||||||||  ||||          | |||  |||||||||||  |||||||||| ||||||||||| | |||||| ||  |||||||    
T  28148119 aagcaaagaagaaacttaacaggagaa---aataatatttca--ttattaaagttcacattgaatttatatgagtattggtctagatggtatgtatttaa 28148213  T
Q  376 taagtgcttttcttatattgcggattggtttggtttg 412  Q
    | |||| |||||||||||||| | ||| |||||||||    
T  28148214 ttagtgtttttcttatattgcagtttgatttggtttg 28148250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 119 - 231
Target Start/End: Original strand, 2940100 - 2940212
Alignment:
Q  119 tccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagtaatcctatttgataagaaatacaaa 218  Q
    ||||||||||  ||||||||||||||| ||||||||| ||||||| |||||  || ||||| |||||||| ||||||||| | ||  |||||||||||||    
T  2940100 tccaacattaagattttattttcatccaacaatgttcccaactacgtagacggaattaaaatatggacaagaagtaatccaaatttttaagaaatacaaa 2940199  T
Q  219 agactaaaatttt 231  Q
    |||||||| ||||    
T  2940200 agactaaattttt 2940212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 102 - 274
Target Start/End: Original strand, 45226549 - 45226718
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aaaacatggacaaaaagtaatccta 200  Q
    ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| |||| ||||||   |||| | ||||| || ||||||||||||  ||    
T  45226549 caatgttttaaatttcatcaaacattacaatttcattttcatacaacaatgttttcaattacata---caaattaaaaacgtgaacaaaaagtaatttta 45226645  T
Q  201 tttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||  |||||||| ||||||  ||| ||||| |||||| || ||  |||||| |||||| ||||||||||||||    
T  45226646 ttttgtaagaaatgcaaaaggataagatttt-atcattctctaaaggttcaaatagcacgtaaatacatttttg 45226718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 4688937 - 4689026
Alignment:
Q  184 gacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||||||||||| ||||  ||||||||| ||||||| ||||||||| ||||||||  || |||||||||||||| ||||||||||||||    
T  4688937 gacaaaaagtaatcatattctataagaaatgcaaaagattaaaatttt-atcattattaaaaagttcaagtagcacctaaatacatttttg 4689026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 112 - 273
Target Start/End: Complemental strand, 5122280 - 5122119
Alignment:
Q  112 aattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaa-catggacaaaaagtaatcctatttgataaga 210  Q
    ||||| ||| ||||||||||||| |||||||| | || |||||  |||| | ||| |||||| ||||| | ||||||||||||||| ||||||  ||| |    
T  5122280 aatttcatcaaacattacaatttcattttcattctacgatgtttccaacaatataaaccaaattaaaaacgtggacaaaaagtaattctattttgtaaaa 5122181  T
Q  211 aatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
     || |||||||||||  ||||| |||||||  || |||||||||||||||||||||| |||||    
T  5122180 gatgcaaaagactaaggtttta-tcattatataaaagttcaagtagcacataaatacgttttt 5122119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 3666974 - 3666809
Alignment:
Q  106 gttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aaaacatggacaaaaagtaatcctatttg 204  Q
    ||||| ||||| | ||||||||| ||||| |||||||||  |||| ||||| ||| |||||||||||| | ||||  |||||||||||||||| ||||      
T  3666974 gttttgaatttcacccaacattataatttcattttcatcaaacaaagttcttaacaacatagaccaaattaaaaaggtggacaaaaagtaatcatattct 3666875  T
Q  205 ataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattt 271  Q
    || |||| | ||||| ||||| ||||| |||||| |  || ||||||||||  ||||||||||||||    
T  3666874 atgagaagtgcaaaacactaagatttt-atcattctttaaaagttcaagtaatacataaatacattt 3666809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 45150871 - 45150739
Alignment:
Q  95 ttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagta 194  Q
    |||| ||||||||||||||||| |||||||||||| ||||||||||||||  |||| || | ||| ||| || || | | | |||| |||||||||||||    
T  45150871 ttttcagcaatgttttaaatttcatccaacattacgattttattttcatcgaacaacgtacccaattacgtacactagatttaaacgtggacaaaaagta 45150772  T
Q  195 atcctatttgataagaaatacaaaagactaaaa 227  Q
    ||   ||||  ||| || |||||||||||||||    
T  45150771 attaaattttgtaaaaattacaaaagactaaaa 45150739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 8312040 - 8312179
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    ||||||||||||||||| ||||| | |||||||||||||||| |||| | ||| |||||| ||||||| ||  |||||||  |||| ||||||||| |||    
T  8312040 aaagctaaaacacaacaaattttca-gcaatgttttaaatttcatcccatatttcaatttcattttcaaccagcaatgtttacaacaacatagacccaaa 8312138  T
Q  175 taaaacat--ggacaaaaagtaatcctatttgataagaaat 213  Q
    | ||| ||   ||||||| |||||| |||| | ||||||||    
T  8312139 ttaaagataaagacaaaaggtaatcatattcggtaagaaat 8312179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 205 - 274
Target Start/End: Original strand, 42199068 - 42199136
Alignment:
Q  205 ataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||||||||| |||||||||||||||||| | ||| || || |||||||||||||||||||||||| ||||    
T  42199068 ataagaaatgcaaaagactaaaattttatt-attctctaaaagttcaagtagcacataaatacatgtttg 42199136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 144
Target Start/End: Original strand, 17845077 - 17845119
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatc 144  Q
    |||| |||||||||| |||||||||||||||||||||||||||    
T  17845077 caatattttaaatttcatccaacattacaattttattttcatc 17845119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 412
Target Start/End: Complemental strand, 23625561 - 23625507
Alignment:
Q  358 tagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    |||| |||| ||||||||| |||| |||||||||||||||| |||||||||||||    
T  23625561 tagacgatatatatttaattagtgtttttcttatattgcggtttggtttggtttg 23625507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 274
Target Start/End: Original strand, 49641121 - 49641178
Alignment:
Q  216 aaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||||||| |||||| |||||||| || |||||||||| ||||||||||||||||||    
T  49641121 aaaagactaagatttta-tcattatctaaaagttcaagtaacacataaatacatttttg 49641178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 10778380 - 10778339
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcat 143  Q
    |||||||| |||||| ||||||||||||||||||||||||||    
T  10778380 caatgtttcaaatttgatccaacattacaattttattttcat 10778339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 157 - 273
Target Start/End: Complemental strand, 25686314 - 25686199
Alignment:
Q  157 caactacatagaccaaa-ataaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagta 255  Q
    |||| |||||||||||| | ||||| |||  ||||| |||| |||||| |||| ||||  |||||||||||||||| |||||| |  || ||||||||||    
T  25686314 caacaacatagaccaaataaaaaacgtggcaaaaaattaattctattttataacaaatgtaaaagactaaaatttt-atcattctttaaaagttcaagta 25686216  T
Q  256 gcacataaatacattttt 273  Q
    |||| |||||||||||||    
T  25686215 gcac-taaatacattttt 25686199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 7784397 - 7784321
Alignment:
Q  156 tcaactacatagaccaaaataaaa-catggacaaaaagtaatcctatttgataagaaatacaaaagactaaaatttt 231  Q
    ||||| |||||||||||| ||||| |||||||||||||||||| |||||  ||||||||  || ||||||| |||||    
T  7784397 tcaacaacatagaccaaattaaaaacatggacaaaaagtaatcatattttgtaagaaatgtaatagactaagatttt 7784321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 150
Target Start/End: Original strand, 40494613 - 40494656
Alignment:
Q  107 ttttaaattttatccaacattacaattttattttcatccgacaa 150  Q
    |||||||||| ||||||||| |||||||||||||||||| ||||    
T  40494613 ttttaaatttcatccaacatcacaattttattttcatccaacaa 40494656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 54273926 - 54273883
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatcc 145  Q
    |||||||| |||||| ||||||||||||||||||| ||||||||    
T  54273926 caatgtttcaaatttaatccaacattacaattttactttcatcc 54273883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 12916561 - 12916627
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacataga 168  Q
    ||||||||||||||| ||| ||||| ||||||| |||||||||  |||||| || |||| |||||||    
T  12916561 caatgttttaaatttcatcaaacatcacaatttcattttcatctaacaatgctcccaacaacataga 12916627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 28147931 - 28148015
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaact 161  Q
    ||||||||||||||||| || || || ||||||||||||||| || |||||||||||||||| ||  |||  |||||||||| ||||    
T  28147931 aaagctaaaacacaaca-atcttcaa-caatgttttaaatttcatacaacattacaattttaattctatctaacaatgttctaaact 28148015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 410
Target Start/End: Complemental strand, 32223010 - 32222912
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagata-tttaataagtgcttttcttatattgcggattggtttggtt 410  Q
    ||||||||||| ||||||| |||||| ||| ||||| ||||| | ||| ||| | ||| |||||| |||| |||| |||| |||||| |||||||||||    
T  32223010 tgtcattttataaaagtttacattgagtttatatgaatattggtataggtgacatatattttaattagtgtttttattatgttgcggtttggtttggtt 32222912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 274
Target Start/End: Original strand, 46471675 - 46471772
Alignment:
Q  176 aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||||| |||||| |||||||| |||||   ||||||| | |||||| ||| |||||| ||||| || || |||| ||||| ||||||||||||||||||    
T  46471675 aaaacgtggacacaaagtaattctattatgtaagaaacataaaagattaagatttta-tcattctctaaaagttgaagtatcacataaatacatttttg 46471772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 18536438 - 18536397
Alignment:
Q  233 atcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||| || || |||||||||||||||||||||||||||||    
T  18536438 atcattctctaaaagttcaagtagcacataaatacatttttg 18536397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 29701020 - 29701069
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagat 362  Q
    ||||||||||| ||||||||||||||  || ||||||||||| |||||||    
T  29701020 tgtcattttataaaagttttcattgagcttctatgagtattggtttagat 29701069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 412
Target Start/End: Original strand, 41260514 - 41260595
Alignment:
Q  331 ttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    ||||| || ||| ||||||||||| ||||||||| | |  |||||| |||| ||||||||| |||| | |||||||||||||    
T  41260514 ttcatggagtttctatgagtattggtttagatgacataagtttaattagtgtttttcttatgttgcagtttggtttggtttg 41260595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 413
Target Start/End: Complemental strand, 48293083 - 48293026
Alignment:
Q  356 tttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttgt 413  Q
    ||||||||| | | ||||||| |||| ||||||||| |||||| ||||||||||||||    
T  48293083 tttagatgacatagatttaattagtgtttttcttatcttgcggtttggtttggtttgt 48293026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 51907257 - 51907306
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaat 151  Q
    |||||||||| |||| ||||||| ||||||||||||||||| || |||||    
T  51907257 caatgttttatatttcatccaactttacaattttattttcacccaacaat 51907306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 3349828 - 3349780
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaa 150  Q
    ||||||||||||||| ||||||| |||||| || |||||||||| ||||    
T  3349828 caatgttttaaatttgatccaactttacaaattcattttcatccaacaa 3349780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 7764285 - 7764209
Alignment:
Q  156 tcaactacatagaccaaaataaaa-catggacaaaaagtaatcctatttgataagaaatacaaaagactaaaatttt 231  Q
    ||||| || ||||||||| ||||| | ||| |||||||||||| ||||| |||||||||  |||||||||| |||||    
T  7764285 tcaacaacttagaccaaattaaaaacgtggtcaaaaagtaatcatattttataagaaatgtaaaagactaagatttt 7764209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 18881937 - 18881897
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttca 142  Q
    |||| |||||||||| ||||||||||| |||||||||||||    
T  18881937 caatattttaaatttcatccaacattataattttattttca 18881897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 274
Target Start/End: Complemental strand, 48293192 - 48293164
Alignment:
Q  246 agttcaagtagcacataaatacatttttg 274  Q
    |||||||||||||||||||||||||||||    
T  48293192 agttcaagtagcacataaatacatttttg 48293164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 48602310 - 48602247
Alignment:
Q  210 aaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||| ||||| ||||| |||||| |||||||| || ||||||||||||||||||| | |||||||    
T  48602310 aaatgcaaaaaactaagatttta-tcattatctaaaagttcaagtagcacataaacatatttttg 48602247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 4e-76; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 75 - 412
Target Start/End: Original strand, 25495238 - 25495578
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| |||||||||||||||||| || ||||||||||||| | ||| ||||||| |||||||||||||||| |||||||||  |||||| |||||||||     
T  25495238 aaaggtaaaacacaacatattttcaa-caatgttttaaatatcatcaaacattataattttattttcatccaacaatgttccgaactacgtagaccaaat 25495336  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||| |||||||||||||||| |||||  ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||| |||    
T  25495337 taaaacgtggacaaaaagtaatcttattttgtaagaaatacaaaagactaaaattttaatcattctctaagagttcaagtagcacataaatatattattg 25495436  T
Q  275 ctagcaaaa------aagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgataga 368  Q
     ||| ||||      |||||||||||||| ||||          ||||||||||||||||||| ||||||| || ||||||||||| | ||||||||| |    
T  25495437 atagaaaaagcttagaagaaacttaacaagagaa--aaaaaaaatgtcattttattaaagtttccattgaacttatatgagtattggtctagatgataca 25495534  T
Q  369 tatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    |||||||| |||  |||||||||||||||| || ||||||||||    
T  25495535 tatttaattagtttttttcttatattgcggtttagtttggtttg 25495578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 121 - 375
Target Start/End: Original strand, 10090423 - 10090678
Alignment:
Q  121 caacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagtaatcctatttgataagaaatacaaaag 220  Q
    ||||||||||||||||||||||||| | ||||||| ||||||| ||||||||| |||||  ||||||||||||||||||||||  |||||||||||||||    
T  10090423 caacattacaattttattttcatccaataatgttcccaactacgtagaccaaattaaaatttggacaaaaagtaatcctattttgtaagaaatacaaaag 10090522  T
Q  221 actaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttgct------agcaaaaaagaaacttaacaacagaagnnnnnnnnttg 314  Q
    ||||||| || ||||||| || ||||||| |||||||||||||||||||||||  |      |||||| |||||||| ||||| ||||          ||    
T  10090523 actaaaa-ttaaatcattctctaagagtttaagtagcacataaatacattttttatagaaaaagcaaagaagaaactcaacaagagaa----aaaagatg 10090617  T
Q  315 tcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaa 375  Q
    ||||||||||||||||||| |||||||| | ||||||||| | ||||||||| ||||||||    
T  10090618 tcattttattaaagttttctttgaatttctctgagtattggtctagatgatatatatttaa 10090678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 75 - 274
Target Start/End: Original strand, 36567863 - 36568061
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    ||||||||||||||||||||||| | ||||| || ||||||| || ||  ||||||||||||||||||||| ||||||||| ||||||| |||||||||     
T  36567863 aaagctaaaacacaacatattttca-gcaattttctaaatttcatacattattacaattttattttcatccaacaatgttcccaactacgtagaccaaat 36567961  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    | ||||   ||| |||||||||| |||||  |||||||||||||||||||||  ||| |||||| || |||||||||||||| |||||||||||||||||    
T  36567962 ttaaacgcagaccaaaagtaatcatattttgtaagaaatacaaaagactaaatattttatcattctctaagagttcaagtagtacataaatacatttttg 36568061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 75 - 412
Target Start/End: Original strand, 41455021 - 41455359
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    ||||||||||||||||||||||| |  ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||   |||||  |||||||||     
T  41455021 aaagctaaaacacaacatattttcat-caatgttttaaatttcatccaacatttcaattttattttcatccaacaatgtttcaaactatgtagaccaaat 41455119  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    | ||||  ||||||||||||||| |||||  |||||||||  |||||||||| |||| |||| | |  |||||||||||||  |||||| ||||||||||    
T  41455120 ttaaacgcggacaaaaagtaatcatattttgtaagaaatatgaaagactaaattttttatcactttataagagttcaagtaatacataagtacatttttg 41455219  T
Q  275 ctagcaaaa------aagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgataga 368  Q
      || ||||      || ||| ||||||| ||||          ||||||||||||||||||| |||||| ||| ||||||||||| |  |  ||||| |    
T  41455220 aaagaaaaagtacagaaaaaagttaacaagagaa----aaaatatgtcattttattaaagtttccattgagtttctatgagtattggtccaagtgatata 41455315  T
Q  369 tatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    |||||||| |||| |||||||||||||||| | | |||||||||    
T  41455316 tatttaattagtgtttttcttatattgcggttcgatttggtttg 41455359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 75 - 410
Target Start/End: Complemental strand, 28224795 - 28224458
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    ||||| |||| |||| ||||||| || |||||||||| |||| |||||||||||||||||||||||| ||  ||| ||||   |||||| |||||||||     
T  28224795 aaagcaaaaatacaatatattttcaa-caatgttttacatttcatccaacattacaattttattttcgtcgaacagtgtttcgaactacgtagaccaaat 28224697  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||  |||||||| ||||    |||||  ||||||||||||||||||||||||||||||||| ||  ||| |||| |||||||||||| ||  | |||    
T  28224696 taaaatgtggacaaatagtagatttattttgtaagaaatacaaaagactaaaattttaatcattctc-tagaattcaggtagcacataaaaacggtattg 28224598  T
Q  275 ct------agcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagtttt-cattgaatttttatgagtattgatttagatgatag 367  Q
     |      |||||| |||||||||||||| ||||          ||||||||||||||| ||||  ||||||||| ||||| ||||||| |||||||||     
T  28224597 gtagaaaaagcaaagaagaaacttaacaaaagaa---aaaaatatgtcattttattaaaattttgaattgaatttctatgattattgatctagatgatat 28224501  T
Q  368 atatttaataagtgcttttcttatattgcggattggtttggtt 410  Q
    ||||||||| |||| |||||||||||||| | |||||||||||    
T  28224500 atatttaattagtggttttcttatattgcagtttggtttggtt 28224458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 102 - 273
Target Start/End: Original strand, 34087584 - 34087748
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagtaatcctat 201  Q
    |||| |||||||||| |||||||||||||| | |||||||| |  |||||||||| |||||| ||||||||| ||||||||| ||||||||||||| |||    
T  34087584 caatattttaaatttcatccaacattacaactgtattttcaccgaacaatgttctgaactacgtagaccaaattaaaacatgcacaaaaagtaatcatat 34087683  T
Q  202 ttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    ||   ||||||||||||||||| || |||| |||       |||||||||||||||||||| | ||||||||    
T  34087684 tttgaaagaaatacaaaagactgaattttttatc-------aagagttcaagtagcacatagacacattttt 34087748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 75 - 266
Target Start/End: Complemental strand, 17132011 - 17131820
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaa- 173  Q
    |||| |||||||||| ||||||| | |||||||||||||||| |||||||||||| ||||||||||||||  ||||||| | |||||||||| ||||||     
T  17132011 aaagataaaacacaatatattttca-gcaatgttttaaatttcatccaacattacgattttattttcatcaaacaatgtacccaactacatacaccaaag 17131913  T
Q  174 ataaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaata 266  Q
     | |||| |||||||||||||||   ||||  ||| || |||||||||||||| |||| |||||| |  |||||||||| || |||| |||||    
T  17131912 tttaaacgtggacaaaaagtaattaaattttgtaaaaattacaaaagactaaattttttatcattctttaagagttcaaataccacaaaaata 17131820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 102 - 266
Target Start/End: Complemental strand, 35240728 - 35240564
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagtaatcctat 201  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||| ||||||| |  |||||| || |||||| | ||||||||||||||||||||   ||    
T  35240728 caatgttttaaatttcatcaaacattacgattttattttcatccaacaatgtacctaactacgtacaccaaatttaaacatggacaaaaagtaattaaat 35240629  T
Q  202 ttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaata 266  Q
    ||  ||| || |||||||||||||| |||| |||||| |  ||||||||||||| |||| |||||    
T  35240628 tttgtaaaaattacaaaagactaaattttttatcattctttaagagttcaagtaccacaaaaata 35240564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 136 - 410
Target Start/End: Original strand, 33792857 - 33793120
Alignment:
Q  136 attttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatc 235  Q
    |||| ||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||| |||| |||||  ||||||||| |||||| ||||||||||||     
T  33792857 atttccatccaacaatgttctcaactacgtagactaaattaaaacgtggacaaaaagcaatcatattttgtaagaaataaaaaagattaaaattttaatt 33792956  T
Q  236 attatcgaagagttcaagtagcacataaatacatttttgctagcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcat 335  Q
    |||    |||||| |||||| |||||||||||||||||| |||  |||||| ||         |||||         ||||||||||||||| |||||||    
T  33792957 attcgttaagagtccaagtaacacataaatacatttttgatag--aaaaagcaa---------agaagaaaaaaaaatgtcattttattaaaattttcat 33793045  T
Q  336 tgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtt 410  Q
    ||||||| ||| || |||  | || || ||| ||||||||| |||| |||||||||||||| | |||||||||||    
T  33793046 tgaatttctataagcattagtctaaataatatatatttaattagtgtttttcttatattgcagtttggtttggtt 33793120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 75 - 266
Target Start/End: Original strand, 14652606 - 14652796
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||||| |||||||||||||||| | |||||||||||||||| ||| || |||||||||||||||||||   ||||||||   ||| |||||||||||      
T  14652606 aaagcttaaacacaacatattttca-gcaatgttttaaatttcatcaaatattacaattttattttcattttacaatgtttcgaacaacatagaccaact 14652704  T
Q  175 t-aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaata 266  Q
    | ||||||||||||| | ||||||||||||  |||||||| ||||||| ||| ||||| |||||| || || | |||||||| |||| |||||    
T  14652705 taaaaacatggacaatatgtaatcctattttgtaagaaattcaaaagattaagatttt-atcattctctaaaatttcaagtaacacaaaaata 14652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 75 - 266
Target Start/End: Complemental strand, 32244307 - 32244116
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaa- 173  Q
    |||| |||||||||| ||||||| | | |||||||||||||| |||||||||||| ||||||||||||||  ||||||| | ||||||| || ||||||     
T  32244307 aaagataaaacacaatatattttcagg-aatgttttaaatttcatccaacattacgattttattttcatcaaacaatgtacccaactacgtacaccaaag 32244209  T
Q  174 ataaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaata 266  Q
     | |||| |||||||||||||||   ||||  ||| || |||||||||||||| |||| |||||| |  |||||||||| || |||| |||||    
T  32244208 tttaaacgtggacaaaaagtaattaaattttgtaaaaattacaaaagactaaattttttatcattctttaagagttcaaataccacaaaaata 32244116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 75 - 233
Target Start/End: Original strand, 6595134 - 6595293
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| ||||||||||||||||||| || |||||||||||||| ||  || |||||||||||||||||||   ||||||||  |||| || ||||||||      
T  6595134 aaagttaaaacacaacatatttttcagtaatgttttaaatttcattaaatattacaattttattttcattttacaatgtttccaacaacgtagaccaagg 6595233  T
Q  175 t-aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaa 233  Q
    | ||||||| || |||| ||||||||||||  |||||||| ||||||||||  |||||||    
T  6595234 taaaaacatcgaaaaaacgtaatcctattttctaagaaatgcaaaagactaggattttaa 6595293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 266
Target Start/End: Complemental strand, 34881230 - 34881065
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaac-tacatagaccaaaat-aaaacatggacaaaaagtaatcct 199  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| || |||||| ||||  ||||| | |||| | ||||  |||||||||||||||| |    
T  34881230 caatgttttaaatttcatccaacattaaaattttattttcatccaacgatgttcccaacaaacatataacaaattaaaaatgtggacaaaaagtaatcgt 34881131  T
Q  200 atttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaata 266  Q
    ||||  |||||||| ||||| ||||| ||||| |||||| || || | ||||||| |||||||||||    
T  34881130 attttgtaagaaatgcaaaaaactaagatttt-atcattctctaaaaattcaagtggcacataaata 34881065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 75 - 273
Target Start/End: Original strand, 11402746 - 11402942
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||||| |||||||||||||||| | |||||||||||||||  ||| || |||||||||| ||||||||   ||||||||| |||| |||||||||||      
T  11402746 aaagctgaaacacaacatattttca-gcaatgttttaaattccatcaaatattacaatttcattttcattttacaatgttc-caacaacatagaccaagt 11402843  T
Q  175 t-aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    | |||||||||||||||  ||||| |||||  |||||||   |||||||||| ||||| |||||| || || | |||||||||||| | ||||| |||||    
T  11402844 taaaaacatggacaaaacataatcatattttgtaagaaaagtaaaagactaagatttt-atcattctcaaaaatttcaagtagcacgtgaatacgttttt 11402942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 31075516 - 31075439
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaa 179  Q
    ||||||||||||||| |||||| ||||||||||||||||||||  ||||||||| |||| |||||||||||| |||||    
T  31075516 caatgttttaaatttcatccaatattacaattttattttcatctaacaatgttcccaacaacatagaccaaattaaaa 31075439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 6894307 - 6894177
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaa-ataaaacatggacaaaaagtaatccta 200  Q
    ||||||||||||||| ||||||||||||||||||||||| |||   |||||||| |||||||||||| |||| | ||||| |||| | ||| ||||| ||    
T  6894307 caatgttttaaatttcatccaacattacaattttatttttatctaccaatgttcgcaactacatagatcaaataaaaaacgtggatataaaataatctta 6894208  T
Q  201 tttgataagaaatacaaaagactaaaatttt 231  Q
    |||  |  ||||||||||||| ||| |||||    
T  6894207 ttttgtcggaaatacaaaagagtaagatttt 6894177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 75 - 233
Target Start/End: Complemental strand, 691488 - 691332
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| ||||||||||||||||||| ||||||||||| ||||| ||| || |||||||||||||||| ||   ||| | ||  ||   |||||||||||      
T  691488 aaagttaaaacacaacatatttttcagcaatgttttgaatttcatcaaaaattacaattttatttttattttacattatttcca---acatagaccaagt 691392  T
Q  175 t-aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaa 233  Q
    | ||||||||||||||| | ||||||||||  |||||||| ||||| ||||| |||||||    
T  691391 taaaaacatggacaaaacgcaatcctattttttaagaaatgcaaaatactaagattttaa 691332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 313 - 410
Target Start/End: Complemental strand, 5175326 - 5175229
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtt 410  Q
    ||||||||||||||| |||||||||||||||||| || |||  | || || ||| ||||||||| |||| |||| ||||||||||| |||||||||||    
T  5175326 tgtcattttattaaaattttcattgaatttttataagcattagtctatataatatatatttaatcagtgttttttttatattgcggtttggtttggtt 5175229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 313 - 412
Target Start/End: Original strand, 22553744 - 22553843
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    |||||||||||  ||||||| ||||| ||| ||||||||||||| ||| ||| | || |||||| |||| ||||||||| |||||| |||||||||||||    
T  22553744 tgtcattttatagaagttttaattgagtttctatgagtattgatctaggtgagatatgtttaattagtgtttttcttatgttgcggtttggtttggtttg 22553843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 182 - 273
Target Start/End: Complemental strand, 40331310 - 40331220
Alignment:
Q  182 tggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    |||| ||||| ||||| |||||  |||||||| ||||||||||| |||||| ||||| || || ||||||||||||||||||||||||||||    
T  40331310 tggataaaaaataatcttattttttaagaaatgcaaaagactaagatttta-tcattctctaaaagttcaagtagcacataaatacattttt 40331220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 12264051 - 12264141
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataa-aacatggacaaaaa 191  Q
    |||||||| |||||| |||||| |||||||||| |||||||||| |||||||||||| | ||||| |||||| ||| ||||||||| ||||    
T  12264051 caatgtttcaaatttcatccaaaattacaatttcattttcatccaacaatgttctcatcaacatataccaaattaagaacatggaccaaaa 12264141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 274
Target Start/End: Original strand, 40692714 - 40692802
Alignment:
Q  185 acaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||||||||||||| |||||  |||||||||||||||||||| ||||||| ||||  | || ||||||||||||| || ||||||||||||    
T  40692714 acaaaaagtaatcatattttgtaagaaatacaaaagactaagattttaa-cattcactaaaagttcaagtagcatatgaatacatttttg 40692802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 176 - 274
Target Start/End: Original strand, 18432338 - 18432435
Alignment:
Q  176 aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||| |||||||||||||||| |||||   ||||||||| |||||||||| | ||| |||||| || || |||||||||||||||||| || |||||||    
T  18432338 aaaaaatggacaaaaagtaattctattatgtaagaaatataaaagactaagacttt-atcattctctaaaagttcaagtagcacataactatatttttg 18432435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 1681297 - 1681340
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatcc 145  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  1681297 caatattttaaatttgatccaacattacaattttattttcatcc 1681340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 413
Target Start/End: Original strand, 4414609 - 4414707
Alignment:
Q  315 tcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttgt 413  Q
    ||||||||| |||||||||||||| ||| ||| ||||||| |||| |||| | || |||||| | || ||||||||| |||  | ||||||||||||||    
T  4414609 tcattttataaaagttttcattgagtttctataagtattggtttatatgacatatgtttaattaatgtttttcttatgttgtagtttggtttggtttgt 4414707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 6367753 - 6367663
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aaaacatggacaaaaa 191  Q
    ||||||||||||||  ||| |||||||||||||||| ||||||| ||||||||  || | ||||||| |||| | ||||||||||| ||||    
T  6367753 caatgttttaaattcgatctaacattacaattttatgttcatccaacaatgtttccatcaacatagaacaaattaaaaacatggactaaaa 6367663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 274
Target Start/End: Complemental strand, 7591273 - 7591216
Alignment:
Q  216 aaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||||||| |||||| |||||||| || ||||||||||||||||||| |||||||||    
T  7591273 aaaagactaagatttta-tcattatctaaaagttcaagtagcacataaagacatttttg 7591216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 413
Target Start/End: Original strand, 38147500 - 38147598
Alignment:
Q  315 tcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttgt 413  Q
    ||||||||| |||||||||||||| ||| ||||| ||||| | ||  ||| | || |||||| |||| ||||||||| ||| || ||||||||||||||    
T  38147500 tcattttataaaagttttcattgagtttctatgaatattggtctatgtgacacatgtttaattagtgtttttcttatgttggggtttggtttggtttgt 38147598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 407
Target Start/End: Complemental strand, 42920734 - 42920640
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttg 407  Q
    ||||||||||| |||||||| ||||| ||| |||||||| |||| ||||||| | ||||||||| |  | ||||||||| |||| | ||||||||    
T  42920734 tgtcattttataaaagttttaattgagtttctatgagtagtgatctagatgacatatatttaattaaagtttttcttatgttgcagtttggtttg 42920640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 155
Target Start/End: Complemental strand, 733933 - 733881
Alignment:
Q  103 aatgttttaaattttatccaacattacaattttattttcatccgacaatgttc 155  Q
    ||||||| |||||| |||||||| |||||||||||||||||||  ||||||||    
T  733933 aatgtttcaaatttgatccaacagtacaattttattttcatccagcaatgttc 733881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 6718778 - 6718818
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttca 142  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  6718778 caatattttaaatttcatccaacattacaattttattttca 6718818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 8150803 - 8150851
Alignment:
Q  105 tgttttaaattttatccaacattacaattttattttcatccgacaatgt 153  Q
    ||||| |||||| |||||||||||| ||||||||||||||| |||||||    
T  8150803 tgtttcaaatttgatccaacattacgattttattttcatccaacaatgt 8150851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 12378910 - 12378819
Alignment:
Q  182 tggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||||||| |||| ||||||  ||||||||  |||| ||||| |||||| ||||| |  || |||| ||||||||||||||||||||||||    
T  12378910 tggacaaaaattaattctattttgtaagaaatgtaaaatactaagatttta-tcattctttaaaagtttaagtagcacataaatacatttttg 12378819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 32721372 - 32721276
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aaaacatggacaaaaagtaatc 197  Q
    ||||||||||||||| ||| || |||||||||||||||| |||  ||||| |||  |||||||||||  ||| | ||||| ||||||||| ||||||    
T  32721372 caatgttttaaatttcatcaaatattacaattttatttttatctaacaatattcgtaactacatagattaaattaaaaacttggacaaaatgtaatc 32721276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 412
Target Start/End: Original strand, 18432476 - 18432575
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    ||||||||||| |||||||||||||| ||| ||||||||||| | ||| ||| | | | ||||| | || |||| |||| |||||| |||||||| ||||    
T  18432476 tgtcattttataaaagttttcattgattttctatgagtattggtataggtgacatagacttaattaatgttttttttatgttgcggtttggtttgatttg 18432575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 2802679 - 2802629
Alignment:
Q  314 gtcattttattaaagttttcattgaatttttatgagtattgatttagatga 364  Q
    |||||||||| ||||||||| |||| ||||||||||||||| | |||||||    
T  2802679 gtcattttatcaaagttttcgttgagtttttatgagtattggtctagatga 2802629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 173
Target Start/End: Original strand, 19402361 - 19402431
Alignment:
Q  103 aatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaa 173  Q
    ||||||| | |||||||| ||||||  |||||||||||||||| |||||| | ||| | ||||||||||||    
T  19402361 aatgtttcagattttatcgaacattctaattttattttcatccaacaatggtatcatcaacatagaccaaa 19402431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 36760267 - 36760328
Alignment:
Q  80 taaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttca 142  Q
    |||||||||||||||||| || |||  |||| ||||| || ||||||||||||||||||||||    
T  36760267 taaaacacaacatattttcaa-caaaatttttaatttcattcaacattacaattttattttca 36760328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 354
Target Start/End: Original strand, 6633690 - 6633731
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattg 354  Q
    ||||||||||| |||||||||||||| ||| |||||||||||    
T  6633690 tgtcattttataaaagttttcattgagtttctatgagtattg 6633731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 20191837 - 20191760
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaa 179  Q
    ||||||||||||||| ||| ||||||| ||||| |||||||||  || || |||| ||| ||||| |||||| |||||    
T  20191837 caatgttttaaatttcatcgaacattaaaatttcattttcatctaaccatattctgaacaacataaaccaaattaaaa 20191760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 140
Target Start/End: Complemental strand, 26007260 - 26007227
Alignment:
Q  107 ttttaaattttatccaacattacaattttatttt 140  Q
    ||||||||||||||| ||||||||||||||||||    
T  26007260 ttttaaattttatcctacattacaattttatttt 26007227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 6633582 - 6633649
Alignment:
Q  206 taagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||||||||| |||||| ||| |||||| ||||| || |  |||||||||||||||| ||||||||||||    
T  6633582 taagaaatataaaagattaagatttta-tcattctctacaagttcaagtagcacatcaatacatttttg 6633649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 25715555 - 25715595
Alignment:
Q  233 atcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    |||||| || || ||||||||||||||||||||||||||||    
T  25715555 atcattctctaaaagttcaagtagcacataaatacattttt 25715595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 274
Target Start/End: Complemental strand, 27571823 - 27571795
Alignment:
Q  246 agttcaagtagcacataaatacatttttg 274  Q
    |||||||||||||||||||||||||||||    
T  27571823 agttcaagtagcacataaatacatttttg 27571795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 5e-69; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 75 - 371
Target Start/End: Original strand, 11219099 - 11219401
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttatttt---catccgacaatgttctcaactacatagacca 171  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||| ||||||||| |   ||| | |||||||||||||||||  ||||||    
T  11219099 aaagctaaaacgcaacatatttttcagcaatgttttaaatttcatccaacattaaaattttattatttccatacaacaatgttctcaactacgcagacca 11219198  T
Q  172 aaataaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattt 271  Q
    || |||||| | ||||||||||||||||||||  ||||||||||| ||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  11219199 aattaaaacgtagacaaaaagtaatcctattttgtaagaaatacacaagactaaaattttaatcattctctaagagttcaagtaacacataaatacattt 11219298  T
Q  272 ttgctagcaaaa------aagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgat 365  Q
    ||| ||| ||||      |||||||||||||| ||||          |||||||||||||||||||||||||||||| || |||||||||| ||||||||    
T  11219299 ttgatagaaaaaaccaagaagaaacttaacaaaagaa---aaaaatatgtcattttattaaagttttcattgaatttataagagtattgatctagatgat 11219395  T
Q  366 agatat 371  Q
    | ||||    
T  11219396 atatat 11219401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 75 - 411
Target Start/End: Complemental strand, 24682017 - 24681685
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| |||||||||||||||||  ||  |||||||||||||| ||||||||||| |||| | ||||||||| |||||| || |       |||||||||     
T  24682017 aaaggtaaaacacaacatatttacaaa-aatgttttaaatttcatccaacattataattcttttttcatccaacaatgctcccg------tagaccaaat 24681925  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||| ||||||||||||| ||||||||  ||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  24681924 taaaacgtggacaaaaagtactcctattttgtaagaaatataaaagactaaaattttaatcattctctaagagttcaagtagcacataaatacatttttg 24681825  T
Q  275 ctag------caaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgataga 368  Q
     |||      |||| |||||||||||||| ||||          ||||||||||||||||||| |||||| ||||||| | ||||||| ||||||||| |    
T  24681824 atagaaaaaacaaagaagaaacttaacaagagaa---aaaaatatgtcattttattaaagtttccattgagtttttataattattgatctagatgatata 24681728  T
Q  369 tatttaataagtgcttttcttatattgcggattggtttggttt 411  Q
    |||||||| |||| ||||||||||||| || ||| ||||||||    
T  24681727 tatttaattagtgtttttcttatattgtggtttgttttggttt 24681685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 75 - 410
Target Start/End: Original strand, 13325448 - 13325786
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| ||||| |||||||||||| | || ||||||||||||| |||||||||||||||||||||| ||||  ||||||||||||||||  |||||||||     
T  13325448 aaagttaaaatacaacatattttca-gcgatgttttaaatttcatccaacattacaattttatttccatctaacaatgttctcaactaagtagaccaaat 13325546  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||| || ||||||||||||| |||||  |||||||| |||||||||||||||||||||||| || |||||||||||||||||||| ||| |||||||    
T  13325547 taaaacgtgaacaaaaagtaatcatattttgtaagaaatgcaaaagactaaaattttaatcattctctaagagttcaagtagcacatatatatatttttg 13325646  T
Q  275 ct------agcaaaaaagaaacttaacaa-cagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttag--atgat 365  Q
     |      |||||| ||||||||||| ||  ||||         |||||||||||||||| | | |||||||||| ||||||||||| | |||  || ||    
T  13325647 ataggaagagcaaagaagaaacttaaaaaggagaa-----aaaattgtcattttattaaaatctccattgaatttctatgagtattggtctagatataat 13325741  T
Q  366 agatatttaataagtgcttttcttatattgcggattggtttggtt 410  Q
    | ||||||||| | || |||||||||||||||| |||||||||||    
T  13325742 atatatttaattattgtttttcttatattgcggtttggtttggtt 13325786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 75 - 398
Target Start/End: Complemental strand, 12193397 - 12193073
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||| ||||||||||  |||||||||| ||| || |||||||||     
T  12193397 aaagctaaaacacaacatattttca-gcaatgttttaaattttatccaacattaccattatattttcatcgaacaatgttctaaacaacgtagaccaaat 12193299  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattt--taatcattatcgaagagttcaagtagcacataaatacatttt 272  Q
    |||||| || | ||||||||||| |||||  ||||||||||||||||||||| |||  | |||||| |   |||||||||||||||||||||||||||||    
T  12193298 taaaacgtgcataaaaagtaatcatattttgtaagaaatacaaaagactaaatttttcttatcattctttgagagttcaagtagcacataaatacatttt 12193199  T
Q  273 tgct------agcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgata 366  Q
    || |      |||||| || ||||||||||| | ||          ||||||||||||||||||| |||||||||| ||||||||||| | ||| |||||    
T  12193198 tgatagaaaaagcaaagaaaaaacttaacaagaaaa------aaaatgtcattttattaaagtttccattgaatttctatgagtattggtctaggtgata 12193105  T
Q  367 gatatttaataagtgcttttcttatattgcgg 398  Q
     ||||||||| | || | ||||||||||||||    
T  12193104 tatatttaattaatgttcttcttatattgcgg 12193073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 75 - 398
Target Start/End: Complemental strand, 12437825 - 12437501
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||| ||||||||||  |||||||||| ||| || |||||||||     
T  12437825 aaagctaaaacacaacatattttca-gcaatgttttaaattttatccaacattaccattatattttcatcgaacaatgttctaaacaacgtagaccaaat 12437727  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattt--taatcattatcgaagagttcaagtagcacataaatacatttt 272  Q
    |||||| || | ||||||||||| |||||  ||||||||||||||||||||| |||  | |||||| |   |||||||||||||||||||||||||||||    
T  12437726 taaaacgtgcataaaaagtaatcatattttgtaagaaatacaaaagactaaatttttcttatcattctttgagagttcaagtagcacataaatacatttt 12437627  T
Q  273 tgct------agcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgata 366  Q
    || |      |||||| || ||||||||||| | ||          ||||||||||||||||||| |||||||||| ||||||||||| | ||| |||||    
T  12437626 tgatagaaaaagcaaagaaaaaacttaacaagaaaa------aaaatgtcattttattaaagtttccattgaatttctatgagtattggtctaggtgata 12437533  T
Q  367 gatatttaataagtgcttttcttatattgcgg 398  Q
     ||||||||| | || | ||||||||||||||    
T  12437532 tatatttaattaatgttcttcttatattgcgg 12437501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 75 - 412
Target Start/End: Complemental strand, 22811116 - 22810785
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||        |||||||||||| ||||| ||||||||| ||||||| |||||||||     
T  22811116 aaagctaaaacacaacatattttt--gcaatattttaaatttcat--------acaattttatttccatccaacaatgttcacaactacgtagaccaaat 22811027  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||| ||||||||||||| |  |||||  |||||||||||||||| |||||||||||||||| |  ||||||||||||||||||||||||||||||||    
T  22811026 taaaacgtggacaaaaagtattt-tattttgtaagaaatacaaaagattaaaattttaatcattctataagagttcaagtagcacataaatacatttttg 22810928  T
Q  275 ct------agcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgataga 368  Q
     |      ||||| ||| |||||||| ||  ||||         ||||||||||||||| ||| | |||| ||| ||||||||||| | ||||||||| |    
T  22810927 atagaaaaagcaagaaataaacttaaaaagtgaagaaaaaaaa-tgtcattttattaaaatttccgttgagtttctatgagtattggtctagatgatata 22810829  T
Q  369 tatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    |||||||| |||| ||||||||||||| || ||| |||||||||    
T  22810828 tatttaattagtgtttttcttatattgtggtttgatttggtttg 22810785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 75 - 274
Target Start/End: Original strand, 4785388 - 4785586
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttatttt-catccgacaatgttctcaactacatagaccaaa 173  Q
    |||| |||||||||| ||||||||| |||||  ||||||||| || |||||||||||||||||||| ||||  ||||| ||| ||||||| ||||| |||    
T  4785388 aaagttaaaacacaatatattttta-gcaatactttaaatttcattcaacattacaattttatttttcatca-acaatattcccaactacgtagactaaa 4785485  T
Q  174 ataaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
     |||||| ||||||||||||||||| | ||  ||||||||||||||||||||| |||| ||||||||| |||||||||||||| ||||||||||||||||    
T  4785486 ttaaaacgtggacaaaaagtaatccaactttgtaagaaatacaaaagactaaattttttatcattatctaagagttcaagtagaacataaatacattttt 4785585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 75 - 283
Target Start/End: Complemental strand, 37162583 - 37162379
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| |||||||||| ||||||| | |||||||||||||||| |   ||||||| |||||||||| ||||| ||||||||||||  ||| || | ||||     
T  37162583 aaagttaaaacacaatatattttca-gcaatgttttaaatttcactaaacattataattttatttccatccaacaatgttctca--tacgtatatcaaat 37162487  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||| |||||||||||||||| |||||  ||| ||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||    
T  37162486 taaaacgtggacaaaaagtaatcttattttgtaa-aaatacaaaagactaaaattttaatcattctctaagagttcaagtaacacataaatacatttttg 37162388  T
Q  275 ctagcaaaa 283  Q
     ||| ||||    
T  37162387 atagaaaaa 37162379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 75 - 266
Target Start/End: Original strand, 11017159 - 11017349
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| |||||||||||||||||| | |||||||||||||||| |||||||||||  ||||||||||||||  ||||||| | ||||||| || |||| |     
T  11017159 aaagataaaacacaacatattttca-gcaatgttttaaatttcatccaacattatgattttattttcatcgaacaatgtacccaactacgtacaccagat 11017257  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaata 266  Q
    | |||| |||||||||||||||   ||||  ||| || |||||||||||||| |||| |||||| |  ||||||||||||| |||| |||||    
T  11017258 ttaaacgtggacaaaaagtaattaaattttgtaaaaattacaaaagactaaattttttatcattctttaagagttcaagtaccacaaaaata 11017349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 75 - 262
Target Start/End: Original strand, 33566101 - 33566275
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    ||||||||||||||||||||||| | | |||||||||||||| ||||||||||| |||||||||||||||| || ||||            || |||||     
T  33566101 aaagctaaaacacaacatattttca-gtaatgttttaaatttcatccaacattataattttattttcatccaactatgt------------agcccaaat 33566187  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacata 262  Q
    |||||| ||||||||||||||| | | ||  |||||||||||||||||||||||||  |||||| || ||||||||||||||||||||    
T  33566188 taaaacgtggacaaaaagtaattcaactttgtaagaaatacaaaagactaaaatttatatcattctcaaagagttcaagtagcacata 33566275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 82 - 273
Target Start/End: Original strand, 40436593 - 40436782
Alignment:
Q  82 aaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aaaac 180  Q
    |||||||||||||||   ||||||||||||||||| ||| || |||||||||| ||||||||   |||||||| ||||| |||||||||||  | |||||    
T  40436593 aaacacaacatatttc--agcaatgttttaaatttcatcaaatattacaatttcattttcattttacaatgttttcaacaacatagaccaagttaaaaac 40436690  T
Q  181 atggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    |||||||||| |||||| ||||| |||||||||  |||||||||| ||||| |||||| || || | || || |||||||||||||| |||||    
T  40436691 atggacaaaatgtaatcatattttataagaaatgaaaaagactaagatttt-atcattctctaaaattttaaatagcacataaatacgttttt 40436782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 79 - 274
Target Start/End: Complemental strand, 9012766 - 9012572
Alignment:
Q  79 ctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aa 177  Q
    ||||||||||| ||||||| ||  |||||||||||||| ||| ||||||||||||||||||| |||| ||||||||  |||||||||| | | || | ||    
T  9012766 ctaaaacacaaaatattttcaat-aatgttttaaatttcatcgaacattacaattttatttttatccaacaatgttggcaactacatatatctaattaaa 9012668  T
Q  178 aacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||| | |||||||||||||| |||||  |||||||| |||||  |||| ||||| |||||| || || |||| ||||||||||||||||||| ||||    
T  9012667 aacgttgacaaaaagtaatcttattttgtaagaaatgcaaaaagctaagatttt-atcattctctaaaagtttaagtagcacataaatacatctttg 9012572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 75 - 266
Target Start/End: Complemental strand, 36340681 - 36340490
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaa- 173  Q
    |||| |||||||||| ||||||| | |||||||||||||||| |||||||||||| ||||||||||||||  ||||||| | ||||||| || ||||||     
T  36340681 aaagataaaacacaatatattttca-gcaatgttttaaatttcatccaacattacgattttattttcatcaaacaatgtacccaactacgtacaccaaag 36340583  T
Q  174 ataaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaata 266  Q
     | |||| |||||||||||||||   ||||  ||| || |||||||||||||| |||| |||||| |  |||||||||| || |||| |||||    
T  36340582 tttaaacgtggacaaaaagtaattaaattttgtaaaaattacaaaagactaaattttttatcattctttaagagttcaaataccacaaaaata 36340490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 102 - 273
Target Start/End: Original strand, 41346084 - 41346255
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataa-aacatggacaaaaagtaatccta 200  Q
    |||||||| |||||||||||||||||||||||| |||||||| | |||| |||| |  ||||||| | |||||||| ||  |||||||||||||||| ||    
T  41346084 caatgtttaaaattttatccaacattacaatttcattttcattcaacaacgttccctgctacatataacaaaataataatgtggacaaaaagtaatctta 41346183  T
Q  201 tttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    |||   ||||||||||||||| | | ||||| |||| |||| || | |||||||| |||||||||||||||||    
T  41346184 ttttgaaagaaatacaaaagattgagatttt-atcactatctaaaaattcaagtaacacataaatacattttt 41346255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 75 - 270
Target Start/End: Complemental strand, 18755261 - 18755065
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| |||||||||||||||||| ||  ||| |||||||||| ||| ||||||||||||| ||||| |||  ||||| ||| |||||||||| |||| |     
T  18755261 aaagttaaaacacaacatattttcaaa-aatattttaaatttcatcaaacattacaatttcatttttatctaacaatattc-caactacataaaccatat 18755164  T
Q  175 taaaacatg---gacaaaaagtaatcctatttgataagaaa-tacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatt 270  Q
    ||||| |||   |||||||||||||| |||||  ||| ||| ||||| ||||||| ||||| |||||| || ||| |||||||||| |||||||||||||    
T  18755163 taaaa-atgttagacaaaaagtaatcatattttctaaaaaaatacaatagactaagattttcatcattctctaagtgttcaagtagaacataaatacatt 18755065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 138 - 412
Target Start/End: Original strand, 1271352 - 1271619
Alignment:
Q  138 tttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcat 237  Q
    |||||||| ||||||||||||||| | ||||||||| | ||||  ||||||||||||||| |||||  ||||||||||||||||||| | ||||| ||||    
T  1271352 tttcatccaacaatgttctcaactgcgtagaccaaatttaaacgcggacaaaaagtaatcatattttgtaagaaatacaaaagactagattttta-tcat 1271450  T
Q  238 tatcgaagagttcaagtagcacataaatacatttttgctagcaaaa------aagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttt 331  Q
    | |        |||||||| |||||||||||| |||   || ||||      |||||||||||||| ||||          | |||||||||||||||||    
T  1271451 tct--------tcaagtagtacataaatacatgttttaaagtaaaagcaaagaagaaacttaacaagagaaaaaata----tatcattttattaaagttt 1271538  T
Q  332 tcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
     |||||| ||| ||||||||||| | ||  ||||  ||||||||| |||| |||||||||||||||| |||||||||||||    
T  1271539 ccattgagtttctatgagtattggtctaagtgatgtatatttaattagtgtttttcttatattgcggtttggtttggtttg 1271619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 176 - 412
Target Start/End: Original strand, 28441718 - 28441955
Alignment:
Q  176 aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg- 274  Q
    ||||| |||| ||||||||||| |||||  |||||||| ||||||||||||||||| ||||||||| || |||||||||||||||||||  ||||||||     
T  28441718 aaaacgtggaaaaaaagtaatcgtattttttaagaaatgcaaaagactaaaatttt-atcattatctaaaagttcaagtagcacataaaaccatttttga 28441816  T
Q  275 -----ctagcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagat 369  Q
           | |||| |||||||||||||| ||||          ||||||||||| |||||||||||||| ||||||||||||||||| ||  | ||| ||    
T  28441817 aataaaaaacaaagaagaaacttaacaaaagaa----agaatatgtcattttataaaagttttcattgagtttttatgagtattgatctatgttatatat 28441912  T
Q  370 atttaataagtgcttttcttatattg-cggattggtttggtttg 412  Q
    |||| || | |  ||||||||||||| ||| |||||||||||||    
T  28441913 atttgattaat-tttttcttatattgccggtttggtttggtttg 28441955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 317 - 411
Target Start/End: Complemental strand, 3155716 - 3155622
Alignment:
Q  317 attttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggttt 411  Q
    ||||||| |||||||||||||| ||| |||||||||| || ||  | ||| ||||||||| |||| |||| |||| |||||| ||||||||||||    
T  3155716 attttataaaagttttcattgagtttctatgagtatttatctatgttatatatatttaattagtgttttttttatgttgcggtttggtttggttt 3155622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 30254046 - 30253954
Alignment:
Q  80 taaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaa 173  Q
    ||||||||||| |||||| || ||||||||||||||| ||||||| |||||| ||| ||| ||||| ||||||||| || |||| |||| ||||    
T  30254046 taaaacacaacctattttcaa-caatgttttaaatttcatccaactttacaaatttttttccatccaacaatgttcccagctacgtagatcaaa 30253954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 28073113 - 28073070
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatcc 145  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||    
T  28073113 caatgttttaaatttgatccaacgttacaattttattttcatcc 28073070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 6591384 - 6591448
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttca 142  Q
    ||||||||||||||||||   ||| | |||| |||| ||||| |||||||||||||||||||||||||    
T  6591384 aaagctaaaacacaacat---tttcaacaatatttttaatttcatccaacattacaattttattttca 6591448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 101 - 142
Target Start/End: Complemental strand, 7428334 - 7428293
Alignment:
Q  101 gcaatgttttaaattttatccaacattacaattttattttca 142  Q
    |||||||||||||||| ||| |||||||||||||||||||||    
T  7428334 gcaatgttttaaatttcatctaacattacaattttattttca 7428293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 31497528 - 31497492
Alignment:
Q  80 taaaacacaacatatttttaagcaatgttttaaattt 116  Q
    ||||||||||||||||||| |||||||||||||||||    
T  31497528 taaaacacaacatatttttcagcaatgttttaaattt 31497492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 232
Target Start/End: Complemental strand, 29914495 - 29914373
Alignment:
Q  111 aaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaa-catgga-caaaaagtaatcctatttgataa 208  Q
    |||||| ||| |||||||||||||||||| |||||  |||||||  || | ||||| |||||| ||||| |||||| ||||||  |||  | |||| |||    
T  29914495 aaatttgatctaacattacaattttattt-catccatcaatgtttccatcaacatataccaaattaaaaacatggatcaaaaaacaattatctttggtaa 29914397  T
Q  209 gaaatacaaaagactaaaatttta 232  Q
    |||||||||| |||||||||||||    
T  29914396 gaaatacaaatgactaaaatttta 29914373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 352
Target Start/End: Complemental strand, 30252765 - 30252726
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtat 352  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  30252765 tgtcattttattaaagttttcattgaaattatatgagtat 30252726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 411
Target Start/End: Complemental strand, 12073916 - 12073818
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggttt 411  Q
    ||||||||| | |||||||||||| | ||||||||||||||| | ||| ||| | |||||||||| ||  |||| |||| |||   |||||||||||||    
T  12073916 tgtcattttgtaaaagttttcattaagtttttatgagtattggtctaggtgacaaatatttaatatgtttttttattatgttgttaattggtttggttt 12073818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 30253577 - 30253501
Alignment:
Q  182 tggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcac 259  Q
    ||||||||||||||||||||||  | |||||| | |||||||||| ||||||| ||| || |||| ||||| ||||||    
T  30253577 tggacaaaaagtaatcctattttgttagaaattc-aaagactaaagttttaattattctctaagaattcaattagcac 30253501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 32064038 - 32063973
Alignment:
Q  113 attttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaa 178  Q
    ||||||||||||| |||||||| |||||||||  |||| || ||| || |||||||||||| ||||    
T  32064038 attttatccaacactacaatttcattttcatctaacaacgtcctctacaacatagaccaaattaaa 32063973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 274
Target Start/End: Complemental strand, 3129414 - 3129386
Alignment:
Q  246 agttcaagtagcacataaatacatttttg 274  Q
    |||||||||||||||||||||||||||||    
T  3129414 agttcaagtagcacataaatacatttttg 3129386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 131; Significance: 9e-68; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 75 - 410
Target Start/End: Original strand, 9686198 - 9686532
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||||||||||||||| |||||| || ||||||||||||||| ||   ||||||||||||||||||||||| |||||||||  ||| || |||||||||     
T  9686198 aaagctaaaacacaacttattttcaa-caatgttttaaatttcat---acattacaattttattttcatccaacaatgttcctaacaacgtagaccaaat 9686293  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||| ||||||||| ||| || ||||| ||||||||||  |||||||||||||||||||||| || |||||||||||||||||||||||||||||||     
T  9686294 taaaacttggacaaaatgtattcttatttaataagaaatattaaagactaaaattttaatcattctctaagagttcaagtagcacataaatacatttttt 9686393  T
Q  275 ct-------agcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatag 367  Q
     |       |||||| |||||||||||||| ||||          | | |||||||||||||||||||||||||| ||||||||||||| |||||||||     
T  9686394 ttatagaaaagcaaagaagaaacttaacaagagaa----aaaatattttattttattaaagttttcattgaatttctatgagtattgatctagatgatat 9686489  T
Q  368 atatttaataagtgcttttcttatattgcggattggtttggtt 410  Q
    ||||||||| |||| |||||||| ||||| | |||||||||||    
T  9686490 atatttaattagtgtttttcttacattgcagtttggtttggtt 9686532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 79 - 405
Target Start/End: Original strand, 6399975 - 6400306
Alignment:
Q  79 ctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaa 178  Q
    ||||||||||||||||||||| | |||||||||||||| |||||||||||||| || |||||||||  ||||||||| ||||||| ||||||||| ||||    
T  6399975 ctaaaacacaacatattttta-gtaatgttttaaatttcatccaacattacaacttaattttcatctaacaatgttc-caactacgtagaccaaattaaa 6400072  T
Q  179 acatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagt---agcacataaatacatttttgc 275  Q
    || |||||||||||||||| |||||  ||||||||||||||||||||||||||||| ||| || ||||||||||||   ||||| ||||||||||||||     
T  6400073 acgtggacaaaaagtaatcttattttgtaagaaatacaaaagactaaaattttaattattctctaagagttcaagtagcagcacctaaatacatttttga 6400172  T
Q  276 t------agcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagat 369  Q
    |      |||||| ||||||||||||||  ||||         ||||||||||||||||||| |||||||||| ||||||||||| | ||||||||| ||    
T  6400173 tagaaaaagcaaagaagaaacttaacaagtgaagcaagta---tgtcattttattaaagtttccattgaatttatatgagtattggtctagatgatatat 6400269  T
Q  370 atttaataagtgcttt-tcttatattgcggattggtt 405  Q
    ||||||| |||| |||  ||||||||| || ||||||    
T  6400270 atttaattagtgttttagcttatattgaggtttggtt 6400306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 75 - 410
Target Start/End: Complemental strand, 7170017 - 7169680
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||||   ||||| |||     
T  7170017 aaagttaaaacacaacatattttta-gcaatgttttaaatttcatccaacattacaattttatttccatccaacaatgttcccaacttattagactaaat 7169919  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||| |||||||||| ||||| |||||  |||||||||||||||||||||  |||||||||| ||   || ||||||||||||||||||||||||||     
T  7169918 taaaacgtggacaaaaaataatcatattttgtaagaaatacaaaagactaaa--tttaatcattctctgcgacttcaagtagcacataaatacatttttt 7169821  T
Q  275 ct--------agcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgata 366  Q
     |        |||||| |||||||||||| | ||||          |||||||||||||||||||||||||||||| ||||||||||| | || ||||||    
T  7169820 ttatagaaaaagcaaagaagaaacttaacgagagaa---aaatatatgtcattttattaaagttttcattgaatttctatgagtattggtctatatgata 7169724  T
Q  367 gatatttaataagtgcttttcttatattgcggattggtttggtt 410  Q
     ||||||||| |||| |||||||||||||| | |||||| ||||    
T  7169723 tatatttaattagtgtttttcttatattgcagtttggttcggtt 7169680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 79 - 274
Target Start/End: Complemental strand, 24644885 - 24644692
Alignment:
Q  79 ctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaa 178  Q
    ||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| | ||    
T  24644885 ctaaaacacaacatattttcaa-caatgttttaaatttcatccaacattacaattttattttcatccaacaatgttctcaactacgtagaccaaatttaa 24644787  T
Q  179 acatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||| |||| |||||||||| |||||  ||| ||||||||| ||||||| |||| |||||| || |||||| ||||||| |||||||||||||||||    
T  24644786 acacggac-aaaagtaatcatattttgtaaaaaatacaaatgactaaatttttgatcattctctaagagtgcaagtagtacataaatacatttttg 24644692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 95 - 410
Target Start/End: Original strand, 22413970 - 22414294
Alignment:
Q  95 ttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagta 194  Q
    |||| ||||||||||||||||| ||||||||||||||||| ||| |||||| ||||||||| ||||||||||||||| | |||||| |||||||||||||    
T  22413970 ttttcagcaatgttttaaatttcatccaacattacaatttcattctcatccaacaatgttcccaactacatagaccagattaaaacgtggacaaaaagta 22414069  T
Q  195 atcctatttgataagaaatacaaaag-----actaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttgct------agcaaaa 283  Q
    |||  ||||  |||||||||||||||      | | || ||| |||||| || || ||||||||||||||||||||| ||||||| |      ||||||     
T  22414070 atctcattttgtaagaaatacaaaagtaatcccaacaacttttatcattctctaaaagttcaagtagcacataaatagatttttgatagataaagcaaag 22414169  T
Q  284 aagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatattt-aataagtgc 382  Q
    |||||||||||||| ||||          ||||||||||||||||||| |||||||||| | ||||||||| | ||||||||| ||||||  || ||||     
T  22414170 aagaaacttaacaagagaa---aaaaatatgtcattttattaaagtttccattgaatttatgtgagtattggtctagatgatatatatttggattagtgt 22414266  T
Q  383 ttttcttatattgcggattggtttggtt 410  Q
    |||||||||||||||| |||||| ||||    
T  22414267 ttttcttatattgcggtttggttcggtt 22414294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 107 - 274
Target Start/End: Complemental strand, 31945341 - 31945174
Alignment:
Q  107 ttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagtaatcctatttgat 206  Q
    |||||| ||| ||||| |||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||| |||||||||| |||||  | ||  |    
T  31945341 ttttaattttcatccatcattacaattttattttcatacaacaatgttctcaactacgtagaccaaattaaaacgtggacaaaaattaatcaaactttgt 31945242  T
Q  207 aagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||||||||||||||||||||||||  || ||| || |||||||||| |||||||||||||||||||||    
T  31945241 aagaaatacaaaagactaaaatttgtataattctctaagagttcaaatagcacataaatacatttttg 31945174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 80 - 274
Target Start/End: Original strand, 13092148 - 13092342
Alignment:
Q  80 taaaacacaac-atatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaa 178  Q
    ||||||||||| ||||||||| |||||||||||||||| ||| |||||||||||| ||||||||||| ||| ||||| |||| || ||||| ||| | ||    
T  13092148 taaaacacaaccatattttta-gcaatgttttaaatttcatcgaacattacaattatattttcatccaacagtgttcccaacgacgtagacaaaatttaa 13092246  T
Q  179 acatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||  ||| |||||||||||||||||  ||||| || |||||||||||||  || |||||| || ||||||| |||||| ||| |||||||||||||    
T  13092247 acgcggagaaaaagtaatcctattttgtaagatatgcaaaagactaaaaaatttatcattctctaagagtttaagtagtacaaaaatacatttttg 13092342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 82 - 238
Target Start/End: Complemental strand, 16971671 - 16971516
Alignment:
Q  82 aaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaaca 181  Q
    |||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||| || || |||||  ||||||| ||||| ||| | ||||     
T  16971671 aaacacaacatattttcaa-caatgttttaaattttatccaacaatacaattttattttcacccaacgatgtttccaactacgtagacaaaatttaaacg 16971573  T
Q  182 tggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcatt 238  Q
     ||||||||||||||||||||| |||| ||||| | |||| |||| |||| ||||||    
T  16971572 cggacaaaaagtaatcctattttataaaaaatatagaagaataaattttttatcatt 16971516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 176 - 403
Target Start/End: Original strand, 29048794 - 29049022
Alignment:
Q  176 aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttgc 275  Q
    ||||| || ||||||||||||| || ||  ||||||||||||||||||||   ||| |||||| |  ||||||||||||||||||||||||||||||||     
T  29048794 aaaacgtgaacaaaaagtaatcttactttgtaagaaatacaaaagactaattattttatcattcttaaagagttcaagtagcacataaatacatttttga 29048893  T
Q  276 ta------gcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagat 369  Q
     |      ||||| |||||||||||||  ||||          |||||||||||||||||||||||||| ||||||||||||||| | || |||||| ||    
T  29048894 aacaaaaagcaaagaagaaacttaacatgagaaaaaaa-----tgtcattttattaaagttttcattgagtttttatgagtattggtctaaatgatatat 29048988  T
Q  370 atttaataagtgcttttcttatattgcggattgg 403  Q
    ||||||| | || ||||| |||||||||| ||||    
T  29048989 atttaattaatgtttttcctatattgcggtttgg 29049022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 75 - 266
Target Start/End: Original strand, 11417217 - 11417408
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| |||||||||||||||||| | |||||||||||||||| |||||||||||| ||||||||||||||  ||||||| | ||||||| || |||| |     
T  11417217 aaagataaaacacaacatattttca-gcaatgttttaaatttcatccaacattacgattttattttcatcgaacaatgtacccaactacgtacaccagat 11417315  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaa-attttaatcattatcgaagagttcaagtagcacataaata 266  Q
    | |||| | || ||||||||||   ||||  ||| || ||||||||||||||  |||| |||||| |  ||||||||||||| |||| |||||    
T  11417316 ttaaacgtagaaaaaaagtaattaaattttgtaaaaattacaaaagactaaatttttttatcattctttaagagttcaagtaccacaaaaata 11417408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 82 - 266
Target Start/End: Complemental strand, 13532203 - 13532020
Alignment:
Q  82 aaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaa-c 180  Q
    |||||||||| ||||| | |||||||||||||||| ||| || |||||||||| ||||||||   ||||||||  |||| | |||||||||  ||||| |    
T  13532203 aaacacaacaaattttca-gcaatgttttaaatttcatcaaatattacaatttcattttcattttacaatgtttccaacaaaatagaccaagttaaaatc 13532105  T
Q  181 atggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaata 266  Q
    |||||||||  ||||||||||||  |||||||| ||||||| ||| ||||| |||||| |  || | |||||||||||||||||||    
T  13532104 atggacaaatcgtaatcctattttgtaagaaatgcaaaagattaagatttt-atcattctataaaatttcaagtagcacataaata 13532020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 274
Target Start/End: Complemental strand, 892177 - 892080
Alignment:
Q  176 aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||||||||  |||||||| |||||   ||||||||| |||||| ||| |||||| ||||| || || |||||||||||||||||||||||||||||    
T  892177 aaaacatggacgcaaagtaattctattatgtaagaaatataaaagattaagatttta-tcattctctaaaagttcaagtagcacataaatacatttttg 892080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 8135589 - 8135643
Alignment:
Q  107 ttttaaattttatccaacattacaattttattttcatccgacaatgttctcaact 161  Q
    |||||||||| | |||||||||||||||||||||||||| |||||||||||||||    
T  8135589 ttttaaatttcacccaacattacaattttattttcatccaacaatgttctcaact 8135643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 232
Target Start/End: Original strand, 20500712 - 20500865
Alignment:
Q  79 ctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aa 177  Q
    ||||||||||||||||||| | ||||||||| |||||| ||| || |||||||||| ||||||||   ||||||||   ||| |||||||||||  | ||    
T  20500712 ctaaaacacaacatattttca-gcaatgtttcaaatttcatcaaatattacaatttcattttcattttacaatgtttctaacaacatagaccaagttaaa 20500810  T
Q  178 aacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaatttta 232  Q
    ||||||||||||| ||||   |||||  |||||||| ||||||| ||| ||||||    
T  20500811 aacatggacaaaacgtaagtttattttgtaagaaatgcaaaagattaagatttta 20500865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 176 - 274
Target Start/End: Complemental strand, 19134938 - 19134841
Alignment:
Q  176 aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||||||| |||||||||||||  ||||   ||||||||  |||||||||| |||||| | ||| || || |||||||||||||||||||||||||||||    
T  19134938 aaaacatagacaaaaagtaatggtattatgtaagaaatgtaaaagactaagattttatt-attctctaaaagttcaagtagcacataaatacatttttg 19134841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 313 - 410
Target Start/End: Complemental strand, 24644651 - 24644556
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtt 410  Q
    ||||||||||||||||||||||||||  || ||||||||||| |  | |||||  |||| |||| |||| |||||||||||||||  |||||||||||    
T  24644651 tgtcattttattaaagttttcattgaggttctatgagtattggtccaaatgat--atatataattagtgtttttcttatattgcgacttggtttggtt 24644556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 28610808 - 28610923
Alignment:
Q  120 ccaacattacaa-ttttattttcatccgacaatgttctcaactacatagaccaaaat-aaaacatgga-caaaaagtaatcctatttgataagaaataca 216  Q
    |||||||||||| |||||||||||||| ||||||||| || | |||||||||||| | |||| ||||| ||||||  ||| || || |||||||||||||    
T  28610808 ccaacattacaaattttattttcatccaacaatgttcccatcaacatagaccaaattaaaaatatggaccaaaaaacaattctcttcgataagaaataca 28610907  T
Q  217 aaagactaaaatttta 232  Q
    |||  |||| ||||||    
T  28610908 aaatgctaagatttta 28610923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 412
Target Start/End: Original strand, 8064880 - 8064974
Alignment:
Q  319 tttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtg-cttttcttatattgcggattggtttggtttg 412  Q
    ||||| |||||||||||||| ||| ||||||||||||  ||||||| | ||||||||| ||||  ||||||||| |||||| ||| ||| |||||    
T  8064880 tttataaaagttttcattgagtttctatgagtattgacatagatgacatatatttaattagtgttttttcttatgttgcggtttgatttagtttg 8064974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 412
Target Start/End: Complemental strand, 13531967 - 13531869
Alignment:
Q  314 gtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    |||||||||| ||||||| |||||||||| ||||||||||| | ||| ||| | || |||||| |    ||||||||| |||||| |||||||||||||    
T  13531967 gtcattttataaaagtttccattgaatttctatgagtattggtctaggtgagatatgtttaattaacatttttcttatgttgcggtttggtttggtttg 13531869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 28633200 - 28633289
Alignment:
Q  184 gacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||||||||||||| |||||   ||| ||||| |||||||||| |||||| ||||| || || |||| ||||| ||||||||||||||||||    
T  28633200 gacaaaaagtaattctattatgtaaaaaatataaaagactaagatttta-tcattttctaaaagtttaagtaacacataaatacatttttg 28633289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 12147913 - 12147836
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaa 179  Q
    |||||||| |||||| |||||| ||||| ||||||||||||||  ||||||||||||   ||| |||||||| |||||    
T  12147913 caatgtttcaaatttgatccaaaattactattttattttcatctaacaatgttctcataaacaaagaccaaactaaaa 12147836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 396
Target Start/End: Complemental strand, 31945147 - 31945070
Alignment:
Q  319 tttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgc 396  Q
    ||||||||||||| | |||| ||| ||||| ||||  ||||| ||||| ||||||||| |||| ||||||||||||||    
T  31945147 tttattaaagtttcctttgactttctatgaatattagtttaggtgatatatatttaattagtgtttttcttatattgc 31945070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 4563046 - 4563086
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttca 142  Q
    ||||||||| ||||| |||||||||||||||||||||||||    
T  4563046 caatgttttcaatttcatccaacattacaattttattttca 4563086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 410
Target Start/End: Complemental strand, 19134794 - 19134703
Alignment:
Q  319 tttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtt 410  Q
    ||||| ||||||| |||| | ||| |||||||||| || ||| ||| | | ||||||| |||| ||||||||| |||||| |||||||||||    
T  19134794 tttataaaagtttccattaagtttctatgagtatttatctaggtgacatagatttaattagtgtttttcttatgttgcggtttggtttggtt 19134703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 359
Target Start/End: Complemental strand, 16971451 - 16971405
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgattta 359  Q
    ||||||||||||||||||| |||||  ||| ||||||||||||||||    
T  16971451 tgtcattttattaaagtttccattgtgtttctatgagtattgattta 16971405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 354
Target Start/End: Original strand, 4577478 - 4577519
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattg 354  Q
    |||| |||||| |||||||||||||||||| |||||||||||    
T  4577478 tgtcgttttataaaagttttcattgaatttctatgagtattg 4577519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 4577277 - 4577317
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttca 142  Q
    ||||||||| ||||| ||||||||| |||||||||||||||    
T  4577277 caatgttttcaatttcatccaacatgacaattttattttca 4577317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 2e-62; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 95 - 412
Target Start/End: Complemental strand, 55467557 - 55467239
Alignment:
Q  95 ttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagta 194  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||| ||||||| ||||||||| | ||||  ||||||||||||    
T  55467557 ttttcagcaatgttttaaatttcatccaacataacaattttattttcatccaacaatgttcgcaactacgtagaccaaatttaaacgcggacaaaaagta 55467458  T
Q  195 atcctatttgataagaaatacaaaagactaa-aattttaatcattatcgaagagttcaagtagcacataaatacatttttgctagcaaaa----aagaaa 289  Q
    ||| |||||  ||||||||||||||||||||   |||| |||||| || |||||||||||||| |||||||||||||||||  || ||||    ||||||    
T  55467457 atcatattttgtaagaaatacaaaagactaattttttttatcattctctaagagttcaagtagtacataaatacatttttgaaagaaaaaacagaagaaa 55467358  T
Q  290 cttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttctt 389  Q
    |||||||| ||||          |||||||||||||||||||||||||| ||| ||||||||||| || |  ||||| ||||||| | |||| |||||||    
T  55467357 cttaacaaaagaa----aaaacatgtcattttattaaagttttcattgagtttctatgagtattggttcaagtgatatatatttagttagtgtttttctt 55467262  T
Q  390 atattgcggattggtttggtttg 412  Q
    |||||| || |||||||||||||    
T  55467261 atattgaggtttggtttggtttg 55467239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 75 - 283
Target Start/End: Complemental strand, 2566267 - 2566060
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    ||||||||||||||||||||||| || || |||||||||||| ||| |||||||||||||||||||||||| |||||||||  |||||  |||||||||     
T  2566267 aaagctaaaacacaacatattttcaacca-tgttttaaatttcatctaacattacaattttattttcatccaacaatgttccaaactatgtagaccaaat 2566169  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||||||| ||||||||||||||||||   |||||||||||||||||||||| ||||||||| || |||||||||||||| |||| |||| |||||||    
T  2566168 taaaacatgggcaaaaagtaatcctattttgaaagaaatacaaaagactaaaatattaatcattctctaagagttcaagtagaacattaatatatttttg 2566069  T
Q  275 ctagcaaaa 283  Q
     ||| ||||    
T  2566068 atagaaaaa 2566060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 75 - 412
Target Start/End: Complemental strand, 25919187 - 25918850
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    ||||||||||||||||||||||| |   |||||||||||||| | |||||||| ||||||||||||||||| |||||||||||||||||  ||||||||     
T  25919187 aaagctaaaacacaacatattttcact-aatgttttaaatttcacccaacatttcaattttattttcatccaacaatgttctcaactacgcagaccaaat 25919089  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||  ||||||||||||||||  | ||  ||| |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||    
T  25919088 taaaatgtggacaaaaagtaatcaaactttgtaataaatacaaaagactaaaatttttatcattctctaagagttcaagtagcacataaatacatttttg 25918989  T
Q  275 ------ctagcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgataga 368  Q
            | |||| || ||||||||||| | ||         |||||||||||||||||||| |||||| ||| ||| ||||||| |  || || || |    
T  25918988 aaacaaaaaacaaagaaaaaacttaacaagataa-----aaatttgtcattttattaaagtttccattgagtttctataagtattggtcgaggtggtata 25918894  T
Q  369 tatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    ||||||||  ||| |||||||||||||||  |||||||||||||    
T  25918893 tatttaatccgtgtttttcttatattgcgttttggtttggtttg 25918850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 112 - 412
Target Start/End: Complemental strand, 22256197 - 22255894
Alignment:
Q  112 aattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagtaatcctatttgataagaa 211  Q
    ||||| ||||||||||||||||||||||||||||  |||||| |  ||| || ||||||||| |||||| ||| ||||||| ||| |||| |  ||||||    
T  22256197 aatttcatccaacattacaattttattttcatccagcaatgtccctaacaacgtagaccaaattaaaacgtgggcaaaaagaaattctatcttgtaagaa 22256098  T
Q  212 atacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttgctagcaaaa-------aagaaacttaacaacagaagn 304  Q
    |||||||||||||||| |||||||||| || |||||||||||||||| ||||||||||||||| ||| ||||       |||||||||||||| ||||      
T  22256097 atacaaaagactaaaaatttaatcattctctaagagttcaagtagcatataaatacatttttgataggaaaaaacaacgaagaaacttaacaagagaa-- 22256000  T
Q  305 nnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggt 404  Q
            |  |||||||||||||||| |||||||||| ||||||||||| | ||  ||||| ||||||||| |||| ||||||||||| |||| |||||    
T  22255999 --aaaatataacattttattaaagtttccattgaatttatatgagtattggtctacgtgatatatatttaattagtgtttttcttatatcgcggtttggt 22255902  T
Q  405 ttggtttg 412  Q
    ||||||||    
T  22255901 ttggtttg 22255894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 75 - 412
Target Start/End: Original strand, 26758376 - 26758715
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    ||||||||||||||||||||||| | |||||||||||||||| |  ||| ||||||||||||||||||||| ||||||||| ||||||  ||||| |||     
T  26758376 aaagctaaaacacaacatattttca-gcaatgttttaaatttcactcaaaattacaattttattttcatccaacaatgttcccaactatgtagactaaat 26758474  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt- 273  Q
    | ||||  ||| ||||||||||| |||||| ||| |||||||||||||||||||| | |||||| |  |||||||||||||| |||| |||||||||||     
T  26758475 ttaaacgcggataaaaagtaatcatatttggtaataaatacaaaagactaaaattgttatcattctgtaagagttcaagtagtacattaatacatttttt 26758574  T
Q  274 ------gctagcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatag 367  Q
             || ||| |||||||||||||| ||||          |||||||| ||||||||||||||||| ||| |||| |||||| || |  |||||     
T  26758575 taaagaaaaagtaaataagaaacttaacaagagaa----aaaatatgtcatttgattaaagttttcattgagtttctatgggtattggttcaagtgatat 26758670  T
Q  368 atatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    |||||| || |||| |||||||||||||||| |||||||||||||    
T  26758671 atattttattagtgtttttcttatattgcggtttggtttggtttg 26758715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 75 - 273
Target Start/End: Original strand, 54122468 - 54122667
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaa--ttttattttcatccgacaatgttctcaactacatagaccaa 172  Q
    |||| |||| || |||||||||||||  |||||||||||||| ||| || |||||||  |||||||||||||| ||||||||||||||||| || |||||    
T  54122468 aaagttaaaccataacatatttttaat-aatgttttaaatttcatcaaatattacaaaattttattttcatccaacaatgttctcaactacgtataccaa 54122566  T
Q  173 aataaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttt 272  Q
    | |||||| ||||||||||||||||| |     ||||||||||||||||||||| |||| |||||| || ||||||||||||||||||||||||||||||    
T  54122567 attaaaacttggacaaaaagtaatccaacccagtaagaaatacaaaagactaaattttttatcattctctaagagttcaagtagcacataaatacatttt 54122666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 75 - 302
Target Start/End: Original strand, 27054226 - 27054458
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttatttt-catccgacaatgttctcaactacatagaccaaa 173  Q
    |||| ||||||||||||||||||   ||||| |||||||| | |||||  ||| |||||||||||| ||||| ||||| ||| |||||| ||| ||||||    
T  27054226 aaagttaaaacacaacatattttct-gcaattttttaaatctcatccataattgcaattttattttgcatccaacaatattcccaactatataaaccaaa 27054324  T
Q  174 ataaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
     ||||| ||||||||||||||||| |||||  |||||||||||||||| ||||| ||||||||||  | |||||||||||||||||||||||||||||||    
T  27054325 ttaaaatatggacaaaaagtaatcatattttgtaagaaatacaaaagagtaaaa-tttaatcattcactaagagttcaagtagcacataaatacattttt 27054423  T
Q  274 gctag------caaaaaagaaacttaacaacagaa 302  Q
    | |||      |||| |||||||||||||||||||    
T  27054424 gatagaaaaaacaaagaagaaacttaacaacagaa 27054458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 75 - 405
Target Start/End: Original strand, 45629341 - 45629671
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| ||||||| |||||||||| | ||||| |||||||||| || ||||||||||||||||||||||||| |||||||| |||||||  |||| ||||     
T  45629341 aaaggtaaaacataacatattttca-gcaatattttaaatttcatacaacattacaattttattttcatccaacaatgttttcaactatgtagatcaaac 45629439  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    | ||| | |||||||||| |||||| |||| ||||||||||||||||||||||| || |||||| |  || | ||||||||| ||||||||| |||||||    
T  45629440 ttaaatacggacaaaaagcaatcctttttg-taagaaatacaaaagactaaaatatttatcattctttaaaaattcaagtagtacataaatagatttttg 45629538  T
Q  275 ctag------caaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgataga 368  Q
      ||      |||| |||||||||||||| | ||          ||||||||||||||||||| | ||||| || ||||||||||| |  |  ||||| |    
T  45629539 aaagaaaaaacaaagaagaaacttaacaaaataa----aaaatatgtcattttattaaagtttccgttgaaattctatgagtattggtccaagtgatata 45629634  T
Q  369 tatttaataagtgcttttcttatattgcggattggtt 405  Q
    |||||||| |||| ||||||||||||| || ||||||    
T  45629635 tatttaattagtgtttttcttatattgtggtttggtt 45629671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 75 - 233
Target Start/End: Complemental strand, 38651924 - 38651764
Alignment:
Q  75 aaagctaaaacacaacatattttta-agcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaa 173  Q
    |||| |||||||||||||||||||  ||||||||||||||||| ||| || |||||||||||||||| ||   ||||||||  |||| |||||||||||     
T  38651924 aaagttaaaacacaacatatttttctagcaatgttttaaatttcatcaaatattacaattttatttttattttacaatgtttccaacaacatagaccaag 38651825  T
Q  174 ataa-aacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaa 233  Q
     ||| ||||||||||||| ||||||||||||  |||||||||||||||||||| |||||||    
T  38651824 ttaacaacatggacaaaatgtaatcctattttctaagaaatacaaaagactaagattttaa 38651764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 87 - 405
Target Start/End: Complemental strand, 45915129 - 45914805
Alignment:
Q  87 caacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggac 186  Q
    ||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||  ||| ||||||||||||| ||||||||| | ||||    |     
T  45915129 caacatattttcaa-caatgttttaaatttcatccaacattacaattttattttcatcaaacagtgttctcaactacgtagaccaaatttaaacgaaaat 45915031  T
Q  187 aaaaagtaatcctatttgataagaaatacaaaagactaa---aattttaatcattatcgaagagttcaagtagcacataaatacatttttgctag----- 278  Q
    ||||||||||| |||||  ||||||||| ||||||||||     |||| |||||| |  ||||||| |||||| ||||||||||||||||   ||         
T  45915030 aaaaagtaatcatattttttaagaaataaaaaagactaattttttttttatcattctttaagagtttaagtagtacataaatacatttttaaaagaaaaa 45914931  T
Q  279 -caaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaata 377  Q
     |||| |||||||||||||| ||||          ||||||||||||||||||||||||||   | | ||||||||| |  | |||||| |||||||||     
T  45914930 acaaacaagaaacttaacaagagaa--aaaaaatatgtcattttattaaagttttcattgagcctctttgagtattggtccaaatgatatatatttaatt 45914833  T
Q  378 agtgcttttcttatattgcggattggtt 405  Q
    |||  |||||||||||||||| ||||||    
T  45914832 agtatttttcttatattgcggtttggtt 45914805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 274
Target Start/End: Original strand, 4280436 - 4280633
Alignment:
Q  79 ctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaa---tgttctcaactacatagaccaaa-a 174  Q
    ||||||||| ||||||||| | |||||||||||||||| ||||||||||||||||| ||| ||||  |||||   ||||  |||||||||||||||||      
T  4280436 ctaaaacactacatattttca-gcaatgttttaaatttcatccaacattacaatttcattatcattggacaatattgtttccaactacatagaccaaatt 4280534  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||||||||||||||||| ||||| |||||  ||| |||| ||| ||||||| ||||| |||||| || || ||| |||||| ||| ||| ||||||||||    
T  4280535 taaaacatggacaaaaaataatcatattttgtaataaatgcaacagactaagatttt-atcattttctaaaagtgcaagtaacacgtaagtacatttttg 4280633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 75 - 273
Target Start/End: Original strand, 37045461 - 37045655
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||||| |||||||| ||||||| || ||||||||||||||| ||| ||||||||||||| ||||||||   ||||||||  |||| ||||| ||||||     
T  37045461 aaagctgaaacacaatatattttcaa-caatgttttaaatttcatcaaacattacaatttcattttcat--tacaatgtttccaacaacataaaccaaat 37045557  T
Q  175 t-aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    | |||||  ||||||||||||||| |||||  |||||||| ||||||||| | || ||  ||||| || || |||| |||||||||||||||||||||||    
T  37045558 taaaaacgcggacaaaaagtaatcttattttgtaagaaatgcaaaagactgagatgtt-ctcattctctaaaagtt-aagtagcacataaatacattttt 37045655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 87 - 274
Target Start/End: Complemental strand, 42363140 - 42362954
Alignment:
Q  87 caacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaa-catgga 185  Q
    ||||||||||||  |||||||||| ||||| ||| ||||||||||||| ||||||||   |||||| |  |||| |||||||||||  ||||| | ||||    
T  42363140 caacatatttttc-gcaatgttttcaatttcatcaaacattacaatttaattttcattttacaatgattccaacgacatagaccaagttaaaaacgtgga 42363042  T
Q  186 caaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||||||||| |||||  |||||||| ||||| ||||| ||||| |||||| || || ||| |||| ||||||||||||| ||||||    
T  42363041 caaaaagtaatcatattttgtaagaaatgcaaaatactaagatttt-atcattctctaaaagtacaagcagcacataaatacgtttttg 42362954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 313 - 412
Target Start/End: Original strand, 8355716 - 8355814
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    |||||||||||||||||||||||| ||||| ||||||||||| | ||||||||  ||||||||| |||| ||| |||||||||||| |||||||||||||    
T  8355716 tgtcattttattaaagttttcattaaatttctatgagtattggtctagatgatgtatatttaattagtg-tttacttatattgcggtttggtttggtttg 8355814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 82 - 273
Target Start/End: Original strand, 44651118 - 44651307
Alignment:
Q  82 aaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaaca 181  Q
    ||||||| |||||||| | |||||||||||||||| ||| || ||||| |||| |||||| |   |||||||| ||||| ||||| |||||   |||| |    
T  44651118 aaacacagcatattttca-gcaatgttttaaatttcatcaaatattacgatttcattttcgttttacaatgttttcaacaacatataccaagtaaaaata 44651216  T
Q  182 tggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    ||||||||| |||||| |||||  |||||||| ||||||||||| |||||  ||||| || || | |||||||||||||||||||| |||||    
T  44651217 tggacaaaacgtaatcttattttgtaagaaatgcaaaagactaagatttt-ttcattctctaaaatttcaagtagcacataaatacgttttt 44651307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 95 - 273
Target Start/End: Complemental strand, 46253362 - 46253188
Alignment:
Q  95 ttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagta 194  Q
    |||| ||||||||||||||||||||  ||| ||| |||||||||||||||| ||| ||||  |||||| ||||| | |  | |||||| || ||| | ||    
T  46253362 ttttcagcaatgttttaaattttataaaacgttataattttattttcatccaacattgtttccaactaaatagagcgagtttaaacatagaaaaatatta 46253263  T
Q  195 atcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    ||||||||| |||||||||    ||| ||||| |||| |||||| || |||||||||||||  ||||||||||||||||    
T  46253262 atcctattttataagaaat----aaggctaaattttttatcattctctaagagttcaagtactacataaatacattttt 46253188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 55129913 - 55129990
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaa 179  Q
    |||||||||||| |||||||||||||||||||||||||| |||| ||||||||| |||||||||||| |||| |||||    
T  55129913 caatgttttaaaatttatccaacattacaattttatttttatccaacaatgttcgcaactacatagatcaaattaaaa 55129990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 105 - 274
Target Start/End: Original strand, 4668908 - 4669077
Alignment:
Q  105 tgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aaaacatggacaaaaagtaatcctattt 203  Q
    |||||| ||||||||||||||||||||||| ||||| ||   ||||||||  |||| ||||| |||||  | ||||| ||| |||||||||||| ||||     
T  4668908 tgttttcaattttatccaacattacaatttcatttttatttaacaatgtttccaacgacataaaccaattttaaaacgtgggcaaaaagtaatcttatta 4669007  T
Q  204 gataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
      | ||||||  |||| ||||| |||||| ||||| || || |||||||||||||||||||||||||||||    
T  4669008 cgttagaaatgtaaaatactaatatttta-tcattctctaaaagttcaagtagcacataaatacatttttg 4669077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 82 - 267
Target Start/End: Complemental strand, 5640653 - 5640471
Alignment:
Q  82 aaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataa-aac 180  Q
    ||||||| |||||||| || ||||||||||||||| ||| || |||||||||| |||| |||   ||||||||| |||| | ||| |||||  ||| |||    
T  5640653 aaacacaccatattttcaa-caatgttttaaatttcatcaaatattacaatttcattt-cattttacaatgttc-caacaatatataccaagttaataac 5640557  T
Q  181 atggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatac 267  Q
    |||||||||| ||||||||||||  |||||||| ||||||||||| ||||| |||||| || || | |||||||||||| |||||||    
T  5640556 atggacaaaatgtaatcctattttgtaagaaatgcaaaagactaagatttt-atcattctctaaaatttcaagtagcacgtaaatac 5640471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 75 - 233
Target Start/End: Original strand, 4554842 - 4555001
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| ||||||||||||||||||| |||||||||||| |||| ||| || ||||||| |||||||||||   ||||| ||  |||  |||||||||||      
T  4554842 aaagttaaaacacaacatatttttcagcaatgttttacatttcatcaaatattacaa-tttattttcattttacaatatttccaaagacatagaccaagt 4554940  T
Q  175 t-aaaacatggacaaaaa-gtaatcctatttgataagaaatacaaaagactaaaattttaa 233  Q
    | |||||||||| ||||| |||||| |||||  |||||||| ||||||||||| |||||||    
T  4554941 taaaaacatggaaaaaaacgtaatcttattttctaagaaatgcaaaagactaagattttaa 4555001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 8557884 - 8557729
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||||| ||||||||||||||||   |||||||||||||||| ||| || |||||||||| ||||||||   ||||||||  |||| ||||| |||||      
T  8557884 aaagcttaaacacaacatattttct-gcaatgttttaaatttcatcaaatattacaatttcattttcattttacaatgtttccaaccacataaaccaagt 8557786  T
Q  175 t-aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattt 230  Q
    | |||||||| ||||||  |||||||||||  |||||||| ||||||||||| ||||    
T  8557785 taaaaacatgcacaaaacataatcctatttagtaagaaatgcaaaagactaagattt 8557729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 82 - 263
Target Start/End: Complemental strand, 50578926 - 50578746
Alignment:
Q  82 aaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagac--caaaataaaa 179  Q
    ||||||||| |||||| | |||||||||||||||| ||| || ||||||||||  |||||||   |||||||| || || | ||||||  || || ||||    
T  50578926 aaacacaacttattttca-gcaatgttttaaatttcatcaaatattacaatttcgttttcattttacaatgttttcgacaatatagactgcataa-aaaa 50578829  T
Q  180 catggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataa 263  Q
    ||||||||||| ||||||||||||  |||||||| ||||||||||| ||||| |||||| || || | ||||||| ||||||||    
T  50578828 catggacaaaacgtaatcctattttgtaagaaatgcaaaagactaagatttt-atcattctctaaaatttcaagtggcacataa 50578746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 79 - 194
Target Start/End: Original strand, 48167420 - 48167533
Alignment:
Q  79 ctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaa 178  Q
    |||||||||||||||||||||| |||| || ||||||| |||||||||||||||||||| ||||| | ||||||||  ||| ||| ||||||||| | ||    
T  48167420 ctaaaacacaacatatttttaa-caat-ttataaatttcatccaacattacaattttatgttcattcaacaatgttaccaattacgtagaccaaatttaa 48167517  T
Q  179 acatggacaaaaagta 194  Q
    ||  ||||||||||||    
T  48167518 acgcggacaaaaagta 48167533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 79 - 274
Target Start/End: Original strand, 21562707 - 21562898
Alignment:
Q  79 ctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaa-ataa 177  Q
    |||||||||||||||||||    |||| |||||||||  ||||||  | ||||||| ||| ||| || |||||||| |||||||||||||||||| | ||    
T  21562707 ctaaaacacaacatattttcgc-caatcttttaaattc-atccaatgtcacaatttaattatcacccaacaatgttttcaactacatagaccaaataaaa 21562804  T
Q  178 aacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||  |||||||||||||||| ||||| || |||||| |||| || ||| ||||| |||||| |  |  ||||||||||| |||||||||||||||||    
T  21562805 aatgtggacaaaaagtaatcatattttattagaaatgcaaatgaataagatttt-atcattcttta--agttcaagtagtacataaatacatttttg 21562898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 274
Target Start/End: Complemental strand, 22472975 - 22472801
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa-taaaacatg--gacaaaaagtaatcc 198  Q
    |||||||||||||||   ||||||||||||||||| |||||||  |||||||||   || || || || |||| |||||  ||  | ||||||||||||     
T  22472975 caatgttttaaatttcgaccaacattacaattttactttcatctaacaatgttcctgacaacgtaaacaaaaaataaaatgtgtgggcaaaaagtaatca 22472876  T
Q  199 tatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||||   |||||||| ||||| ||||| |||||| ||||| || || ||||||||||| |||||||||||||||||    
T  22472875 tattatgtaagaaatgcaaaatactaagatttta-tcattttctaaaagttcaagtagaacataaatacatttttg 22472801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 78 - 142
Target Start/End: Original strand, 25465956 - 25466019
Alignment:
Q  78 gctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttca 142  Q
    |||||||||||||||||||| || ||||||||||||||| ||| ||||||||||||| |||||||    
T  25465956 gctaaaacacaacatattttcaa-caatgttttaaatttcatcaaacattacaatttcattttca 25466019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 208 - 412
Target Start/End: Original strand, 48168951 - 48169158
Alignment:
Q  208 agaaatacaaaagactaaaatttta-atcattatcgaagagttcaagtagcacataaatacatttttgc------tagcaaaaaagaaacttaacaacag 300  Q
    ||||||||||||||||| | ||||  |||||| || |||||||||||||| |||||||||||||||||       ||||||| |||||||||| ||  ||    
T  48168951 agaaatacaaaagactacatttttttatcattctctaagagttcaagtagtacataaatacatttttgaaagaaatagcaaagaagaaacttagcagaag 48169050  T
Q  301 aagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggat 400  Q
    ||          |||||||||||||||||||||||| | ||| | ||||||||| | ||  ||||| |||||| || |||  |||||||||||||| | |    
T  48169051 aaaaaata----tgtcattttattaaagttttcattaagtttctttgagtattggtctaagtgatatatattttattagtatttttcttatattgctgtt 48169146  T
Q  401 tggtttggtttg 412  Q
    ||||||||||||    
T  48169147 tggtttggtttg 48169158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 46253147 - 46253042
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatg------atagatatttaataagtgcttttcttatattgcggattggttt 406  Q
    |||||||||||||||||||||||||| ||| ||||||||||| |  |  ||      ||| ||||||||| |||| |||||||||||||||| |||||||    
T  46253147 tgtcattttattaaagttttcattgagtttctatgagtattggtccaagtgatatatatatatatttaattagtgtttttcttatattgcggtttggttt 46253048  T
Q  407 ggtttg 412  Q
    ||||||    
T  46253047 ggtttg 46253042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 398
Target Start/End: Original strand, 38681602 - 38681687
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcgg 398  Q
    ||||||||||| ||||||||||||||||||||| |||||||  | ||||||  | | ||||||| |||| ||||||||| ||||||    
T  38681602 tgtcattttataaaagttttcattgaatttttacgagtattagtctagatggcatagatttaattagtgtttttcttatgttgcgg 38681687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 274
Target Start/End: Complemental strand, 10481526 - 10481354
Alignment:
Q  105 tgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aaaacatggacaaaaagtaatcctattt 203  Q
    ||||||||||| |||||||||||||||||| |||||||||  ||||||||   ||| ||||| |||||| | ||||  ||| || ||||| ||||||||     
T  10481526 tgttttaaattctatccaacattacaatttcattttcatctaacaatgtttctaacaacataaaccaaattaaaaaggtgggcataaagttatcctattc 10481427  T
Q  204 gataagaaa---tacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
      |||||||   || | |  ||||| ||||| |||||| || || |||| ||||||||||||||||||||||||    
T  10481426 cgtaagaaatgttaaatattactaagatttt-atcattttctaaaagttaaagtagcacataaatacatttttg 10481354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 20038561 - 20038604
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatcc 145  Q
    |||||||| |||||| ||||||||||||||||||||||||||||    
T  20038561 caatgtttcaaatttgatccaacattacaattttattttcatcc 20038604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 232
Target Start/End: Original strand, 21238219 - 21238342
Alignment:
Q  111 aaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aaaacatgga-caaaaagtaatcctatttgataa 208  Q
    |||||| ||| ||||||||||||||| ||||||||  |||||||  || | ||||| |||||| | |||||||||| ||||||  ||| || |||| |||    
T  21238219 aaatttgatctaacattacaattttagtttcatccatcaatgtttccatcaacatataccaaattaaaaacatggatcaaaaaacaattctctttggtaa 21238318  T
Q  209 gaaatacaaaagactaaaatttta 232  Q
    ||||| |||| |||||||||||||    
T  21238319 gaaatgcaaatgactaaaatttta 21238342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 274
Target Start/End: Complemental strand, 2832219 - 2832122
Alignment:
Q  176 aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||||| |||||| |||||||| | |||  |||| ||||| ||||||  || |||||| ||||| ||||| ||||||||||||||||||||| |||||||    
T  2832219 aaaacttggacacaaagtaattcaattacataataaatataaaagatcaatatttta-tcattctcgaaaagttcaagtagcacataaatatatttttg 2832122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 8355633 - 8355673
Alignment:
Q  233 atcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    |||||| || |||||||||||||||||||||||||||||||    
T  8355633 atcattctctaagagttcaagtagcacataaatacattttt 8355673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 273
Target Start/End: Complemental strand, 17144606 - 17144471
Alignment:
Q  138 tttcatccgacaatgttctcaactacatagaccaaaataaaa-catggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatca 236  Q
    |||||| | ||||||||  |||||||||||| ||||  |||| | ||||||||||  ||  |||||| ||||||||| ||||||||||| ||||| || |    
T  17144606 tttcattcaacaatgtttccaactacatagagcaaatgaaaaacgtggacaaaaatgaaatctattttataagaaatgcaaaagactaagatttt-ataa 17144508  T
Q  237 ttatcgaagagttcaagtagcacataaatacattttt 273  Q
     |||  || ||||||| ||||| ||||||||||||||    
T  17144507 atatttaaaagttcaaatagcatataaatacattttt 17144471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 25858366 - 25858434
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctc-aactacatagac 169  Q
    |||||||| ||||||  |||||||||||||||| |||||||| | ||||||||||| ||| ||||||||    
T  25858366 caatgtttcaaatttcttccaacattacaatttcattttcattcaacaatgttctcgaacaacatagac 25858434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 173
Target Start/End: Complemental strand, 30739537 - 30739466
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaa 173  Q
    |||||||| |||||| |||  |||||||||||| |||||||||| ||||||||  || | ||||||||||||    
T  30739537 caatgtttgaaatttgatctgacattacaatttcattttcatccaacaatgtttccatcaacatagaccaaa 30739466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 42362915 - 42362816
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    ||||||||||| ||||||| |||||| ||| || |||||||| | ||| ||| | || |||||||| |  || |||||| |||||| |||||||||||||    
T  42362915 tgtcattttataaaagtttccattgagtttataagagtattggtctaggtgaaatatgtttaataaatatttgtcttatgttgcggtttggtttggtttg 42362816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 266
Target Start/End: Complemental strand, 36330509 - 36330420
Alignment:
Q  176 aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaata 266  Q
    ||||||||||||||||||||| |||||   ||||||||  |||||||||| ||| | |||||| || || | |||||||||||| ||||||    
T  36330509 aaaacatggacaaaaagtaattctattatgtaagaaatgaaaaagactaagattgt-atcattctctaaaaattcaagtagcacgtaaata 36330420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 354
Target Start/End: Complemental strand, 2832081 - 2832040
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattg 354  Q
    ||||||||||| ||||||| |||||| |||||||||||||||    
T  2832081 tgtcattttataaaagtttacattgagtttttatgagtattg 2832040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 34635679 - 34635623
Alignment:
Q  176 aaaacatggac-aaaaagtaatcctatttgataagaaatacaaaagactaaaatttta 232  Q
    ||||||||||| ||||||||| |||||| |||||||||| ||||||||||| ||||||    
T  34635679 aaaacatggaccaaaaagtaa-cctattcgataagaaatgcaaaagactaatatttta 34635623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 354
Target Start/End: Original strand, 44651349 - 44651390
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattg 354  Q
    ||||||||||| ||||||| |||||||||| |||||||||||    
T  44651349 tgtcattttataaaagtttccattgaatttctatgagtattg 44651390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 51194396 - 51194449
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttc 155  Q
    |||||||| |||||| | | ||||||||||||||||||| |||| |||||||||    
T  51194396 caatgtttcaaatttgaacaaacattacaattttatttttatccaacaatgttc 51194449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 413
Target Start/End: Complemental strand, 2565941 - 2565897
Alignment:
Q  369 tatttaataagtgcttttcttatattgcggattggtttggtttgt 413  Q
    |||||||| || | |||||||||||||||| ||||||||||||||    
T  2565941 tatttaattagagtttttcttatattgcggtttggtttggtttgt 2565897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 265
Target Start/End: Complemental strand, 3300395 - 3300351
Alignment:
Q  221 actaaaattttaatcattatcgaagagttcaagtagcacataaat 265  Q
    |||||| |||| |||||| || |||||||||||||||||||||||    
T  3300395 actaaattttttatcattctctaagagttcaagtagcacataaat 3300351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 8e-62; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 75 - 412
Target Start/End: Complemental strand, 27507447 - 27507109
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| ||||||||  |||||||||| |||||| ||||||||||||| |||||||||||||||||| ||||| | |||||||  ||||||  ||||||||     
T  27507447 aaaggtaaaacacggcatattttta-gcaatgctttaaattttatcaaacattacaattttatttccatccaaaaatgttcctaactacgaagaccaaat 27507349  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||| |||| |||||||||||||||||  ||| ||||||||| |||||||||||||||||||  | ||||||| ||||| | ||||||||||||||||    
T  27507348 taaaacgtggataaaaagtaatcctattttgtaaaaaatacaaaggactaaaattttaatcattccctaagagtttaagtaacgcataaatacatttttg 27507249  T
Q  275 ct------agcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgataga 368  Q
     |      |||||| |||| ||||||||| ||||          |||||||||| ||||||||  ||||||||| ||||||||| ||| ||||||||| |    
T  27507248 atagaaaaagcaaagaagagacttaacaagagaa----aaaaaatgtcattttactaaagtttcaattgaatttctatgagtatcgatctagatgatata 27507153  T
Q  369 tatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    |||||||| |||| |||||||||||||||| |||||||||||||    
T  27507152 tatttaattagtgtttttcttatattgcggtttggtttggtttg 27507109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 75 - 410
Target Start/End: Complemental strand, 26344983 - 26344647
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| |||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||| | ||||||| ||||||| || ||||||     
T  26344983 aaagttaaaacacaacatattttca-gcaatgttttaaatttcatccaacattacaattttattttcatccaataatgttcccaactacgtataccaaat 26344885  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    | |||| ||||||||||||||||||||||  ||||||||||||||||||||  |||| |||||| || ||||||||| |||| |||| ||||||||||||    
T  26344884 ttaaacgtggacaaaaagtaatcctattttgtaagaaatacaaaagactaatttttttatcattctctaagagttcaggtagtacatgaatacatttttg 26344785  T
Q  275 ------ctagcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgataga 368  Q
            |||||| |||||||||||||| ||||          |||||||||||||||||| ||||| | ||| ||||||||||| |  | | |||| |    
T  26344784 aaagaaaaagcaaagaagaaacttaacaagagaa----aaaatatgtcattttattaaagttctcatttagtttctatgagtattggtccaaacgatata 26344689  T
Q  369 tatttaataagtgcttttcttatattgcggattggtttggtt 410  Q
    |||| ||| ||||  ||||||||||||||| |||||| ||||    
T  26344688 tattcaattagtgtatttcttatattgcggtttggttcggtt 26344647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 75 - 410
Target Start/End: Original strand, 6248228 - 6248557
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    ||||||||||||||| ||||||| | |||||||||||||||| |||||||||||||||||||||||||||  |||||||||| |||||| ||||||||      
T  6248228 aaagctaaaacacaatatattttca-gcaatgttttaaatttaatccaacattacaattttattttcatcaaacaatgttctgaactacgtagaccaagg 6248326  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||        ||||||||||||| |||||  ||||||||| ||||||||||| |||| ||| || || || ||||||| |||||||||||||||||||||    
T  6248327 ta-------cacaaaaagtaatcatattttgtaagaaatagaaaagactaaattttttatctttctctaaaagttcaattagcacataaatacatttttg 6248419  T
Q  275 ct------agcaaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgataga 368  Q
     |      |||||| |||||||||||||| || |          ||||||||||||||||||| |||||||||| ||||||||||| | ||  ||||| |    
T  6248420 atagaaaaagcaaagaagaaacttaacaagagga----aaaatatgtcattttattaaagtttccattgaatttctatgagtattggtctaagtgatata 6248515  T
Q  369 tatttaataagtgcttttcttatattgcggattggtttggtt 410  Q
    |||||||| |||| |||||||||||||||| |||||||||||    
T  6248516 tatttaattagtgtttttcttatattgcggtttggtttggtt 6248557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 79 - 273
Target Start/End: Original strand, 34914283 - 34914476
Alignment:
Q  79 ctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaa 178  Q
    ||||||||||||||||||| | |||||||||||||||| |||  || |||||||||||||||||||| ||||||||| ||||||||||||||||| ||||    
T  34914283 ctaaaacacaacatattttca-gcaatgttttaaatttcatctgaccttacaattttattttcatccaacaatgttcccaactacatagaccaaattaaa 34914381  T
Q  179 acatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
     | |||| |||||||||||| | ||  ||||||||| ||||||||||| |||| || ||| || |||||||||||||||||||||||||||||||    
T  34914382 ccgtggataaaaagtaatccaactttgtaagaaatataaaagactaaattttttattattctctaagagttcaagtagcacataaatacattttt 34914476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 75 - 274
Target Start/End: Original strand, 12973716 - 12973913
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||| |||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| | ||||||||| |||| || |||||||||     
T  12973716 aaagttaaaacgcaacatattttta-gcaatgttttaaatttcatccaacattacaattttattttcattcaacaatgttcccaacaacgtagaccaaat 12973814  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    | ||||  ||||||||||||||| ||||| ||| |||||||||||||||||| |||| ||||||||| ||  |||||||||| |||||||| ||||||||    
T  12973815 ttaaacgcggacaaaaagtaatcatattt-ataggaaatacaaaagactaaattttttatcattatctaaatgttcaagtagtacataaatgcatttttg 12973913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 75 - 412
Target Start/End: Complemental strand, 52380668 - 52380329
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||||||||||| ||||||||||   ||||| |||||||||| |||||||||||||||||||| ||||||| |||||| ||  ||| || |||||||||     
T  52380668 aaagctaaaacaaaacatattttcc-gcaat-ttttaaatttcatccaacattacaattttatcttcatccaacaatgatccgaacaacgtagaccaaat 52380571  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||||||  | ||||||||||||| || ||  |||||||||||||||||||||| ||| || ||| || |||||||||| |||||||||||||||||||||    
T  52380570 taaaacgcgcacaaaaagtaatcatagtttgtaagaaatacaaaagactaaaagttttatgattctctaagagttcaaatagcacataaatacatttttg 52380471  T
Q  275 ctag------caaaaaagaaacttaacaacagaagnnnnnnnnttgtcattttattaaagttttcattgaatttttatgagtattgatttagatg--ata 366  Q
     |||      |||| |||||||||||||| ||||          |||||||||||||||||||| ||||||||| ||| ||||||| | ||| ||  |||    
T  52380470 atagaaaaaacaaagaagaaacttaacaagagaa----aaaatatgtcattttattaaagtttttattgaatttctataagtattggtctaggtgatata 52380375  T
Q  367 gatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
     ||||||||| |||| ||||||||||||| || || ||||||||||    
T  52380374 tatatttaattagtgtttttcttatattggggtttagtttggtttg 52380329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 75 - 227
Target Start/End: Complemental strand, 40095346 - 40095195
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    ||||||||||| ||||||||||| || ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||| ||||||||      
T  40095346 aaagctaaaacgcaacatattttcaa-caatgttttaaatttcattcaacattacaattttattttcatccaacaatgttcccaactacgtagaccaact 40095248  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaa 227  Q
    | ||||  |||||||| ||||| ||||||  ||||||||||||||||||||||    
T  40095247 ttaaacgcggacaaaatgtaattctattttgtaagaaatacaaaagactaaaa 40095195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 75 - 200
Target Start/End: Original strand, 16063003 - 16063126
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    ||||||||||||| |||||||||  |||||||||||| |||| ||||||||||||||| |||||| ||||| ||||||||||||||||| |||||||||     
T  16063003 aaagctaaaacacgacatatttt--agcaatgttttacatttcatccaacattacaatattatttccatccaacaatgttctcaactacgtagaccaaat 16063100  T
Q  175 taaaacatggacaaaaagtaatccta 200  Q
    |||||| |||||||||||||||||||    
T  16063101 taaaacgtggacaaaaagtaatccta 16063126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 95 - 273
Target Start/End: Complemental strand, 36782287 - 36782110
Alignment:
Q  95 ttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagta 194  Q
    |||| |||||||||| |||||| ||||||||||||||||||||||| || | ||||||||| ||||||||||||||||| | ||||   ||| |||||||    
T  36782287 ttttcagcaatgttt-aaatttcatccaacattacaattttatttttattcaacaatgttcccaactacatagaccaaatttaaacgcagacgaaaagta 36782189  T
Q  195 atcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    |||||| ||  ||||||||| ||||||||||| || | |||||| || |||||||||||||  ||||||||||||||||    
T  36782188 atcctactttgtaagaaatataaaagactaaatttgttatcattctctaagagttcaagtaatacataaatacattttt 36782110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 102 - 272
Target Start/End: Original strand, 25507052 - 25507221
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagtaatcctat 201  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||| ||||| || |||  ||||  |||| ||||||||||| |||    
T  25507052 caatgttttaaattttatccaacattacaattttattttcatccaacaaagttctaaacaacataaactaaatgaaaaagtggataaaaagtaatcatat 25507151  T
Q  202 ttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttt 272  Q
    ||  |||||||| ||||||| ||| ||||| |||||  || || ||||||||||||||||||||| |||||    
T  25507152 tttgtaagaaatgcaaaagattaatatttt-atcatcgtctaaaagttcaagtagcacataaatatatttt 25507221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 283
Target Start/End: Original strand, 27350794 - 27350982
Alignment:
Q  82 aaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaaca 181  Q
    |||||||||||||||| | | | |||||||||||| |||||||||||||||||||||||||||| ||||| || |||||||| |||| |||| ||||||     
T  27350794 aaacacaacatattttca-gtactgttttaaatttcatccaacattacaattttattttcatccaacaatattttcaactacgtagagcaaattaaaact 27350892  T
Q  182 tggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttgctagcaa 281  Q
    |||||||||||||| |||||||  |           ||||||||||  ||||||||| || |||||||||||||||||||||||||||||||| ||| ||    
T  27350893 tggacaaaaagtaaccctattttgt-----------aagactaaaa-gttaatcattctctaagagttcaagtagcacataaatacatttttgatagaaa 27350980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 75 - 274
Target Start/End: Complemental strand, 8165477 - 8165280
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||||| ||||||||| |||||||  | |||||||||||||| ||| ||||||||||||| ||||||||   ||||||||  |||| |||||||||||      
T  8165477 aaagctgaaacacaacctatttttc-gtaatgttttaaatttcatcaaacattacaatttaattttcattttacaatgtttccaacaacatagaccaagt 8165379  T
Q  175 taaaa-catggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    ||||| | |||| |||||||| || |||||  ||||||||  |||||||||| |||||| |||||||| ||||||||||||||||||||||||| |||||    
T  8165378 taaaaacctggaaaaaaagtattcatattttttaagaaatg-aaaagactaagatttta-tcattatctaagagttcaagtagcacataaatacgttttt 8165281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 80 - 222
Target Start/End: Original strand, 3935612 - 3935753
Alignment:
Q  80 taaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaa 179  Q
    |||||||||||||||| | |  ||||||||||||||| |||||||||||||||||||||| ||||| |||||||| |||| ||  ||  ||||| |||||    
T  3935612 taaaacacaacatattctcat-caatgttttaaatttcatccaacattacaattttatttccatccaacaatgttatcaattatgtatgccaaattaaaa 3935710  T
Q  180 catggacaaaaagtaatcctatttgataagaaatacaaaagac 222  Q
    | |||||||||| ||||| |||||  |||||||||||||||||    
T  3935711 cttggacaaaaaataatcttattttgtaagaaatacaaaagac 3935753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 138 - 274
Target Start/End: Complemental strand, 25559892 - 25559756
Alignment:
Q  138 tttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcat 237  Q
    |||||||| ||||||||||||||| | ||||||||| |||||| ||||||||||||||||| | ||  ||||||||||||||||| |   |||| |||||    
T  25559892 tttcatccaacaatgttctcaacttcgtagaccaaattaaaacgtggacaaaaagtaatccaactttgtaagaaatacaaaagacaattttttttatcat 25559793  T
Q  238 tatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |  | |||||||||||||| | |||||||||||||||    
T  25559792 tcgctaagagttcaagtagtagataaatacatttttg 25559756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 6693799 - 6693700
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    |||||||||||||||||||||||||| ||| ||||||||||| |  |  ||||| ||||||||| |||| |||||||||||||||| |||||||||||||    
T  6693799 tgtcattttattaaagttttcattgagtttctatgagtattggtccaagtgatatatatttaattagtgtttttcttatattgcggtttggtttggtttg 6693700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 274
Target Start/End: Original strand, 44055906 - 44056079
Alignment:
Q  102 caatgttttaaattttatccaa-cattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaa-catggacaaaaagtaatcct 199  Q
    |||||||||||||||| | ||| || |||||||| ||||||||   ||||||||  |||| |||||||| ||  ||||| | |||| ||||||||||| |    
T  44055906 caatgttttaaattttcttcaaacaatacaatttaattttcattttacaatgtttccaacaacatagactaagttaaaaacgtggaaaaaaagtaatctt 44056005  T
Q  200 atttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||||  ||| |||| ||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||||    
T  44056006 attttctaataaatgcaaaagacttaaatttta-tcattttctaaaagttcaagtagcacataaatacatttttg 44056079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 317 - 407
Target Start/End: Complemental strand, 26063904 - 26063814
Alignment:
Q  317 attttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttg 407  Q
    |||||||||||||||||||||| ||| ||||||||||| | ||| ||||| ||||||||| | || |||||||||||||||| ||||||||    
T  26063904 attttattaaagttttcattgagtttctatgagtattgctctaggtgatatatatttaattaatgtttttcttatattgcggtttggtttg 26063814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 82 - 266
Target Start/End: Complemental strand, 32910292 - 32910115
Alignment:
Q  82 aaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaa-c 180  Q
    |||||||||||||||| || ||||||||||||||| ||  || |||||||||| |||||      ||||||||  |||| |||||||||||  ||||| |    
T  32910292 aaacacaacatattttcaa-caatgttttaaatttcattaaatattacaatttcatttt------acaatgtttccaacaacatagaccaagttaaaaac 32910200  T
Q  181 atggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaata 266  Q
    ||||||||||  |||||||||||  |||||||| ||||||||||| |||||  ||||| || || | |||||||||||||||||||    
T  32910199 atggacaaaacataatcctattttgtaagaaatgcaaaagactaagatttt-ctcattctctaaaatttcaagtagcacataaata 32910115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 274
Target Start/End: Original strand, 35375341 - 35375512
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aaaacatggacaaaaagtaatccta 200  Q
    |||||||||| |||||||||||||||||||||| |||||||    | ||  ||| |||||||| |||| ||| | ||||| || ||||||||||||| ||    
T  35375341 caatgttttagattttatccaacattacaatttcattttcaaataaaaaa-ttcccaactacaaagacaaaatttaaaacgtgaacaaaaagtaatcata 35375439  T
Q  201 tttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||| |||||||||||||||| |||| ||||||| ||||  | || ||||||||||||| || |||||| |||||    
T  35375440 ttttataagaaatacaaaagtctaatattttaa-cattcactaaaagttcaagtagcatatgaatacacttttg 35375512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 313 - 405
Target Start/End: Complemental strand, 40094862 - 40094770
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtt 405  Q
    |||||||||||||||||||||||||| ||| ||||||||||| || |  ||||| ||||||||| |||| ||||||||||||| || ||||||    
T  40094862 tgtcattttattaaagttttcattgagtttctatgagtattggttcaagtgatatatatttaattagtgtttttcttatattgtggtttggtt 40094770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 100 - 273
Target Start/End: Complemental strand, 25865911 - 25865752
Alignment:
Q  100 agcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaac-atggacaaaaagtaatcc 198  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||| |||||              |||||||| |||||  ||||||||| ||||||||    
T  25865911 agcaatgttttaaatttcatctaacattaaaattttattttcatccaacaat--------------agaccaaattaaaaatatggacaaagagtaatcc 25865826  T
Q  199 tatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    |||||  || |||||  |||||||||||||||| |||||| || || | ||||||||||||||||||||||||||    
T  25865825 tattttttatgaaatgaaaaagactaaaatttt-atcattctctaacatttcaagtagcacataaatacattttt 25865752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 103 - 273
Target Start/End: Original strand, 19051293 - 19051466
Alignment:
Q  103 aatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaata---aaacatggacaaaaagtaatcct 199  Q
    |||||||||||||| ||| ||||||||||||||||||| |||| |||||| || ||||||||| || |||| ||   |||  |||||||||||||||| |    
T  19051293 aatgttttaaatttcatctaacattacaattttatttttatccaacaatgctcgcaactacattgatcaaattatataaaggtggacaaaaagtaatctt 19051392  T
Q  200 atttgataagaaatac-aaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    |||   |||||||| | |||| ||||| | ||| |||||| ||  | | ||||||||||||| ||||||||||||    
T  19051393 attatgtaagaaatgcaaaaaaactaaga-tttcatcattctctgaaaattcaagtagcacagaaatacattttt 19051466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 273
Target Start/End: Complemental strand, 36797908 - 36797797
Alignment:
Q  162 acatagaccaaaataa-aacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcaca 260  Q
    |||||||||||| ||| ||| ||||||||||| |||| ||||  |||||||||| |||||||||||| ||| ||||||||| || | || ||||||||||    
T  36797908 acatagaccaaattaacaacctggacaaaaagcaatcatattctataagaaatataaaagactaaaacttt-atcattatcaaaaattttaagtagcaca 36797810  T
Q  261 taaatacattttt 273  Q
    |||||| ||||||    
T  36797809 taaatatattttt 36797797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 16537732 - 16537637
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaa-catggacaaaaagtaat 196  Q
    |||| |||||| |||||||  ||||||||||||||||||||||  |||||||| | || ||||||||||||| ||||| ||||| |||||||||||    
T  16537732 caatattttaagttttatctgacattacaattttattttcatctaacaatgtttttaaatacatagaccaaattaaaagcatggtcaaaaagtaat 16537637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 313 - 412
Target Start/End: Original strand, 18310353 - 18310452
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    ||||||||||| |||||||||||||||||| ||| ||||||| |||| |||| | || |||||| ||||  ||||| || |||||| |||||||||||||    
T  18310353 tgtcattttataaaagttttcattgaatttctataagtattggtttaaatgacatatgtttaattagtgtatttctaatgttgcggtttggtttggtttg 18310452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 18834257 - 18834158
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    ||||||||||| |||||||||||||| ||||||| ||||||| | ||| ||| | ||||||||| |||| ||||||||| ||| || |||||||| ||||    
T  18834257 tgtcattttataaaagttttcattgagtttttattagtattggtctaggtgacatatatttaattagtgtttttcttatgttgtggtttggtttgatttg 18834158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 9250005 - 9249903
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaa-ataaaacatggacaaaaagtaatccta 200  Q
    ||||| ||||||||||||| ||||||||||| | ||||| |  | ||||| ||||||| |||||| |||||| | ||||||||||||||| |||||||||    
T  9250005 caatggtttaaattttatcaaacattacaatgtcatttttaatcaacaatcttctcaaatacatataccaaataaaaaacatggacaaaatgtaatccta 9249906  T
Q  201 ttt 203  Q
    |||    
T  9249905 ttt 9249903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 274
Target Start/End: Original strand, 11536969 - 11537144
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatg--gacaaaaagtaatcct 199  Q
    ||||||||||||||| ||  ||||||||||||| |||| ||||| ||||||||  |||||||  |||||||| ||||| |||   |||||| ||||||||    
T  11536969 caatgttttaaatttcatttaacattacaatttcatttacatccaacaatgtttacaactacgcagaccaaattaaaa-atgttaacaaaatgtaatcct 11537067  T
Q  200 atttgataagaaatacaaaagactaaaatttta--atcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||||  |||||||| |||||   ||| ||||||  |||||| |  || |||||||||||||  ||||||||||||||    
T  11537068 atttcgtaagaaatgcaaaaagttaagattttattatcattttttaaaagttcaagtagcatgtaaatacatttttg 11537144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 260
Target Start/End: Complemental strand, 39158214 - 39158059
Alignment:
Q  104 atgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aaaacatggacaaaaagtaatcctatt 202  Q
    ||||||||||| | || |||||||||||||| |||||||||  ||||||||| |||| ||||| |||||| | |||| ||||| ||||||| ||||||||    
T  39158214 atgttttaaatgtcattcaacattacaatttcattttcatctaacaatgttcccaacaacataaaccaaattaaaaagatggataaaaagttatcctatt 39158115  T
Q  203 tgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcaca 260  Q
    |   ||||||| | ||| ||||| ||||||  ||||||| || ||| |||||| ||||    
T  39158114 tcgaaagaaattctaaatactaagatttta--cattatctaaaagtccaagtaacaca 39158059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 410
Target Start/End: Original strand, 3937147 - 3937243
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtt 410  Q
    |||||||| ||||||||||| ||||||||| ||||||||||| | || |||||| | ||||||| |||| |||| ||||||||| | |||||||||||    
T  3937147 tgtcatttaattaaagtttttattgaatttctatgagtattggtataaatgatatacatttaattagtg-tttttttatattgcagtttggtttggtt 3937243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 273
Target Start/End: Complemental strand, 11073256 - 11073108
Alignment:
Q  125 attacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagact 223  Q
    |||||||||| |||||| |   ||||||||  |||| |||||||||||  | ||||||||||||||| | ||||||||||  |||||||| |||||||||    
T  11073256 attacaatttcattttctttttacaatgtttccaacaacatagaccaagttcaaaacatggacaaaacgaaatcctattttgtaagaaatgcaaaagact 11073157  T
Q  224 aaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    || || || |||||| || || | || ||||||||||||||||| |||||    
T  11073156 aagatgtt-atcattctctaaaatttgaagtagcacataaatacgttttt 11073108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 94 - 230
Target Start/End: Original strand, 18310107 - 18310244
Alignment:
Q  94 tttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aaaacatggacaaaaag 192  Q
    ||||| || ||||||||| |||| ||||| ||||||||||| | ||||| |  | |||  || ||||||||||||||||| | ||||| || ||||||||    
T  18310107 ttttttagaaatgttttatatttcatccagcattacaatttcaatttcaacaaaaaatcatcccaactacatagaccaaatttaaaacgtgaacaaaaag 18310206  T
Q  193 taatcctatttgataagaaatacaaaagactaaaattt 230  Q
    ||||| |||||  ||||||||| |||||||||| ||||    
T  18310207 taatcatattttgtaagaaatataaaagactaagattt 18310244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 23475013 - 23474901
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aaaacatggacaaaaagtaatccta 200  Q
    |||||||| |||||| ||||||||||| |  || |||||||| | |||||||||  ||||| |||||||||| | ||||| |||||||||| ||||||||    
T  23475013 caatgtttcaaatttcatccaacattagagattcattttcattcaacaatgttccaaactatatagaccaaattaaaaacgtggacaaaaactaatccta 23474914  T
Q  201 tttgataagaaat 213  Q
    |||  ||||||||    
T  23474913 ttttgtaagaaat 23474901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 6694258 - 6694207
Alignment:
Q  187 aaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcatt 238  Q
    |||||||||||||||||  |||||||||||||||||||||||||| ||||||    
T  6694258 aaaaagtaatcctattttgtaagaaatacaaaagactaaaatttttatcatt 6694207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 266
Target Start/End: Complemental strand, 32937973 - 32937811
Alignment:
Q  105 tgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactac-atagaccaaaataa-aacatggacaaaaagtaatcctatt 202  Q
    ||||||| |||| ||||||||||| ||||| |||||||||| ||||||||   || ||  | |||||||| ||| ||  ||||| |||||||||||||||    
T  32937973 tgttttatatttcatccaacattaaaatttcattttcatccaacaatgtttcaaaataatagagaccaaattaagaatgtggacgaaaagtaatcctatt 32937874  T
Q  203 tgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaata 266  Q
       ||||||||  ||| |||||||||||| |||||| || ||  ||||||||||||||||||||    
T  32937873 atgtaagaaatgtaaaggactaaaatttt-atcattctctaaatgttcaagtagcacataaata 32937811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 9330563 - 9330681
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aaaacatggacaaaaagtaatccta 200  Q
    ||||||||||||||| ||| ||||||||| ||||||||| |||| ||||| ||| |||  | ||  |||||| | ||||||||| ||||| |||||||||    
T  9330563 caatgttttaaatttcatcaaacattacacttttatttttatccaacaatcttcccaaagagatgtaccaaattaaaaacatgggcaaaatgtaatccta 9330662  T
Q  201 tttgataagaaatacaaaa 219  Q
    |||  |||||||| |||||    
T  9330663 ttttgtaagaaatccaaaa 9330681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 102 - 195
Target Start/End: Complemental strand, 39167176 - 39167082
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aaaacatggacaaaaagtaa 195  Q
    ||||||||||||||| |||||||||||||||||||||||||| |  |||||||  ||   ||||| |||||| | ||||||||||| ||||||||    
T  39167176 caatgttttaaatttcatccaacattacaattttattttcattcatcaatgtttacattaacataaaccaaattaaaaacatggaccaaaagtaa 39167082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 274
Target Start/End: Complemental strand, 10847376 - 10847264
Alignment:
Q  162 acatagaccaaaataaaaca-tggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcaca 260  Q
    |||||||||||| |||||   ||||||||||||||| |||||   ||||||||  |||||||||| ||||| |||||| | ||| ||||||| ||||||     
T  10847376 acatagaccaaattaaaaatgtggacaaaaagtaattctattacgtaagaaatgtaaaagactaagatttt-atcatttttgaaaagttcaaatagcacg 10847278  T
Q  261 taaatacatttttg 274  Q
    ||||||||||||||    
T  10847277 taaatacatttttg 10847264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 41751298 - 41751438
Alignment:
Q  78 gctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaa--at 175  Q
    ||||||||||||| |||||| || ||||||| | ||||| |||  |||||||||||| |||||||||| |||||||| ||||| ||    ||||||  |     
T  41751298 gctaaaacacaacttattttcaa-caatgttatgaatttcatctgacattacaatttcattttcatccaacaatgttttcaacaac----accaaatcaa 41751392  T
Q  176 aaaacatggacaaaaagtaatcctatttgataagaaatacaaaaga 221  Q
    |||| ||||||||||||||||  |||||  |||||||| |||||||    
T  41751393 aaaatatggacaaaaagtaattttatttagtaagaaatgcaaaaga 41751438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 398
Target Start/End: Original strand, 50471485 - 50471570
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcgg 398  Q
    ||||||||||||||||||  |||||| ||| ||||||||||| | ||| ||||| ||||||| |  ||| ||||||||||||||||    
T  50471485 tgtcattttattaaagttaccattgagtttctatgagtattggtctaggtgatatatatttatttcgtgtttttcttatattgcgg 50471570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 376
Target Start/End: Original strand, 16063197 - 16063260
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaat 376  Q
    |||||||||||||||||||  ||||||||| ||||||||||| ||||||| | | |||||||||    
T  16063197 tgtcattttattaaagtttcgattgaatttctatgagtattggtttagattaaatatatttaat 16063260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 141
Target Start/End: Original strand, 51231923 - 51231977
Alignment:
Q  86 acaacatatttttaagcaatgttttaaattttatccaacattacaattttattttc 141  Q
    ||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  51231923 acaacttatttttaa-caacgttttaaatttcatccaacattacaattttattttc 51231977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 79 - 144
Target Start/End: Original strand, 25532869 - 25532933
Alignment:
Q  79 ctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatc 144  Q
    ||||||||||||||||||  || ||||||||||||||| ||| ||||||| ||||| |||||||||    
T  25532869 ctaaaacacaacatatttccaa-caatgttttaaatttcatcaaacattaaaatttcattttcatc 25532933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 195
Target Start/End: Complemental strand, 15882048 - 15881955
Alignment:
Q  100 agcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagtaa 195  Q
    ||||||||||||||||| ||| || |||||||||| ||||| |||| |||||||||    ||| |||||||| |  ||||| ||||||||||||||    
T  15882048 agcaatgttttaaatttcatcaaatattacaatttcatttttatccaacaatgttccatgctagatagaccata--aaaacgtggacaaaaagtaa 15881955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 29923206 - 29923166
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttca 142  Q
    ||||||||| ||||| |||||||||||||||||||||||||    
T  29923206 caatgttttgaatttaatccaacattacaattttattttca 29923166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 191
Target Start/End: Original strand, 50310789 - 50310877
Alignment:
Q  104 atgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aaaacatggacaaaaa 191  Q
    |||||| |||||| ||| ||||||||||||||| ||| |||| |||||||||    | |||||||||||| | ||||||||||||||||    
T  50310789 atgtttcaaatttgatctaacattacaattttacttttatccaacaatgttccattcaacatagaccaaattaaaaacatggacaaaaa 50310877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 50951866 - 50951775
Alignment:
Q  182 tggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||||||||||||| ||||   ||||||||  ||||||||| | |||| ||||||||  || | |||||||||||||||| ||||||||||    
T  50951866 tggacaaaaagtaatcttattatgtaagaaatgtaaaagactata-ttttcatcattatataaaatttcaagtagcacataattacatttttg 50951775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 382218 - 382272
Alignment:
Q  79 ctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattt 134  Q
    |||||||||| | |||||||| |||||||||||||||| ||| |||||||||||||    
T  382218 ctaaaacacatcttattttta-gcaatgttttaaatttcatcaaacattacaattt 382272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 412
Target Start/End: Original strand, 8269032 - 8269131
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    ||||||||||| ||||||| |||||| ||| ||| | ||||| | ||||||||| ||||||||| | || ||||||| | |||||| ||  |||||||||    
T  8269032 tgtcattttataaaagtttccattgagtttatataaatattggtctagatgatatatatttaattaatgtttttcttgtgttgcggttttatttggtttg 8269131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 410
Target Start/End: Original strand, 9330787 - 9330882
Alignment:
Q  315 tcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtt 410  Q
    ||||||||| |||||||||||||| ||| ||||||||||| | ||| ||| | || |||||| | || ||||||||| |||||  ||| |||||||    
T  9330787 tcattttataaaagttttcattgagtttctatgagtattggtctaggtgacatatgtttaattaatgtttttcttatgttgcgatttgatttggtt 9330882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 145
Target Start/End: Complemental strand, 27770127 - 27770069
Alignment:
Q  86 acaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatcc 145  Q
    ||||| |||||||||  |||||||||||||| ||||||| ||| ||||||||||||||||    
T  27770127 acaacttatttttaaa-aatgttttaaatttgatccaacgttaaaattttattttcatcc 27770069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 410
Target Start/End: Complemental strand, 35979965 - 35979874
Alignment:
Q  319 tttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtt 410  Q
    ||||| ||||||| |||||| ||| ||||||||||  | ||| ||| | | ||||||| |||| ||||||||| |||||| |||||||||||    
T  35979965 tttataaaagtttccattgagtttctatgagtatttgtctaggtgacatagatttaattagtgtttttcttatgttgcggtttggtttggtt 35979874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 267
Target Start/End: Complemental strand, 35992431 - 35992341
Alignment:
Q  176 aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatac 267  Q
    ||||| ||||||||| ||||| |||||   ||||||||  |||||||||| |||||| | ||| || || ||||||||||||||||||||||    
T  35992431 aaaacgtggacaaaacgtaattctattatgtaagaaatgtaaaagactaagattttatt-attctctaaaagttcaagtagcacataaatac 35992341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 52828970 - 52829036
Alignment:
Q  77 agctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatc 144  Q
    ||||| ||||||||||||||   | |||| |||||||||| ||| |||||||||||||||||||||||    
T  52828970 agctataacacaacatatttccga-caatattttaaatttcatctaacattacaattttattttcatc 52829036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 274
Target Start/End: Complemental strand, 9962019 - 9961922
Alignment:
Q  176 aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||||| |||||| ||||||||  ||||   ||||||||| |||| | ||| |||||| ||||| || || ||||||||||||||||||||||| |||||    
T  9962019 aaaacgtggacacaaagtaattttattatgtaagaaatataaaatattaagatttta-tcattctctaaaagttcaagtagcacataaatacacttttg 9961922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 273
Target Start/End: Original strand, 16063125 - 16063167
Alignment:
Q  231 taatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    |||||||| || |||||||||||||| ||||||||||||||||    
T  16063125 taatcattctctaagagttcaagtagtacataaatacattttt 16063167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 274
Target Start/End: Original strand, 17989293 - 17989390
Alignment:
Q  176 aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||||| |||||| |||||||| |||||   ||||||||| |||||| ||| || ||| ||||| |  || ||||||||||||||||||||| |||||||    
T  17989293 aaaacgtggacacaaagtaattctattatgtaagaaatataaaagattaagatgtta-tcattctataaaagttcaagtagcacataaatatatttttg 17989390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 25559715 - 25559614
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttat--gagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtt 410  Q
    |||||||||||| || ||  |||||| ||| |||  |||||||| | || |||||| ||||||||| | || |||||||||||||||| ||| |||||||    
T  25559715 tgtcattttattcaaattcccattgagtttctatacgagtattggtataaatgatatatatttaattattgtttttcttatattgcggtttgatttggtt 25559616  T
Q  411 tg 412  Q
    ||    
T  25559615 tg 25559614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 410
Target Start/End: Original strand, 25507263 - 25507360
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtt 410  Q
    ||||||||||| |||||||||||||| ||| ||||| |||||  |||   || | ||||||||| |||  ||||||||| ||| || |||||||||||    
T  25507263 tgtcattttataaaagttttcattgagtttctatgaatattggattatgagacatatatttaattagtttttttcttatgttgtggtttggtttggtt 25507360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 17652024 - 17652091
Alignment:
Q  206 taagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||||||||  |||||||||| |||||| | ||| || || ||||||||||||||| |||||||||||||    
T  17652024 taagaaatgtaaaagactaagattttatt-attctctaaaagttcaagtagcacaaaaatacatttttg 17652091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 274
Target Start/End: Complemental strand, 36203214 - 36203186
Alignment:
Q  246 agttcaagtagcacataaatacatttttg 274  Q
    |||||||||||||||||||||||||||||    
T  36203214 agttcaagtagcacataaatacatttttg 36203186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 39185502 - 39185450
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgtt 154  Q
    ||||||||||||||| ||||||||| ||| |||  ||||||||| ||||||||    
T  39185502 caatgttttaaatttgatccaacataacagtttcgttttcatccaacaatgtt 39185450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 9e-40; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 5862577 - 5862458
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaacatggacaaaaagtaatcctat 201  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  ||||||||| ||||||||||| |||||||||||| ||    
T  5862577 caatgttttaaatttcatccaacattacaattttattttcatccaacaatgttctcaactaagtagaccaaattaaaacatggataaaaagtaatccaat 5862478  T
Q  202 ttgataagaaatacaaaaga 221  Q
    ||  ||||||||||||||||    
T  5862477 tttgtaagaaatacaaaaga 5862458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 75 - 273
Target Start/End: Original strand, 11678145 - 11678343
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||||||||| | |||||||||| || |||| |||||||||| ||||| |||||||||||||||||||||| ||||||| | ||||||| |||| ||||     
T  11678145 aaagctaaaaaagaacatattttcaa-caatattttaaatttcatccagcattacaattttattttcatccaacaatgtacccaactacgtagagcaaat 11678243  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagca-cataaatacattttt 273  Q
    | ||||  ||||||||||||||| |||||  ||||||||||||||||||||| |||  |||||| || |||||||||||||| | | |||||||||||||    
T  11678244 ttaaacgcggacaaaaagtaatcatattttgtaagaaatacaaaagactaaattttctatcattctctaagagttcaagtagtatcgtaaatacattttt 11678343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 75 - 273
Target Start/End: Original strand, 11695623 - 11695821
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaa 174  Q
    |||||||||| | |||||||||| || |||| |||||||||| ||||| |||||||||||||||||||||| ||||||| | ||||||| |||| ||||     
T  11695623 aaagctaaaaaagaacatattttcaa-caatattttaaatttcatccagcattacaattttattttcatccaacaatgtacccaactacgtagagcaaat 11695721  T
Q  175 taaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagca-cataaatacattttt 273  Q
    | ||||  ||||||||||||||| |||||  ||||||||||||||||||||| |||  |||||| || |||||||||||||| | | |||||||||||||    
T  11695722 ttaaacgcggacaaaaagtaatcatattttgtaagaaatacaaaagactaaattttctatcattctctaagagttcaagtagtatcgtaaatacattttt 11695821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 82 - 273
Target Start/End: Original strand, 44085642 - 44085832
Alignment:
Q  82 aaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaataaaa-c 180  Q
    |||||||||||||||| | |||||||||||||||| ||| || |||| ||||| ||||||||   |||||||| ||||| |||||||||||  ||||| |    
T  44085642 aaacacaacatattttca-gcaatgttttaaatttcatcaaatattataatttcattttcattttacaatgttttcaacaacatagaccaatttaaaagc 44085740  T
Q  181 atggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    || ||||||| ||||||||||||  |||||||||||||||||| | ||||| |||||| || || | ||||||||||||||||||||||||||    
T  44085741 atagacaaaacgtaatcctattttgtaagaaatacaaaagactgagatttt-atcattctctaaaatttcaagtagcacataaatacattttt 44085832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 82 - 272
Target Start/End: Complemental strand, 30514870 - 30514681
Alignment:
Q  82 aaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaaat-aaaac 180  Q
    |||||||||||||||  ||  |||||||||||||| || |||||||||||||| |||| ||||| ||||||||  | || |||||||| ||  | |||||    
T  30514870 aaacacaacatatttcaaaataatgttttaaatttcattcaacattacaatttcatttccatccaacaatgtttcccacaacatagactaacttaaaaac 30514771  T
Q  181 atggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttt 272  Q
     |||||||||| ||||  ||||    ||||||||||||||| ||| ||||| |||||| || || |||||||||| ||||||||||||||||    
T  30514770 gtggacaaaaactaataatattctgcaagaaatacaaaagattaagatttt-atcattctctaaaagttcaagta-cacataaatacatttt 30514681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 182 - 273
Target Start/End: Complemental strand, 11377488 - 11377398
Alignment:
Q  182 tggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    |||||||||| ||||||||||   |||||||||||||||||||| ||||| |||||| || || ||||||| ||||||||||||||||||||    
T  11377488 tggacaaaaaataatcctattctgtaagaaatacaaaagactaagatttt-atcattctctaaaagttcaaatagcacataaatacattttt 11377398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 75 - 164
Target Start/End: Original strand, 41461225 - 41461314
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaatttt-atccaacattacaattttattttcatccgacaatgttctcaactaca 164  Q
    |||||||||||||||||||||||   | ||| ||||||||||| ||||||||||||||||||||||||||||  |||||||||||| ||||    
T  41461225 aaagctaaaacacaacatattttcc-gtaatattttaaattttcatccaacattacaattttattttcatccaccaatgttctcaaataca 41461314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 273
Target Start/End: Complemental strand, 11051241 - 11051146
Alignment:
Q  176 aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacattttt 273  Q
    ||||||||||||||| |||||||||||   |||||||||||| | ||| | |||||| ||||| || || ||||||||||||| ||||||||||||||    
T  11051241 aaaacatggacaaaa-gtaatcctattatgtaagaaatacaacaaactgatatttta-tcattctctaaaagttcaagtagcatataaatacattttt 11051146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 12884775 - 12884859
Alignment:
Q  328 gttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    |||| |||||| ||| ||| ||||||| | ||| ||||| ||||||||| |||| ||||| |||||||||| |||||||||||||    
T  12884775 gtttccattgagtttctataagtattggtctaggtgatatatatttaattagtgtttttcatatattgcggtttggtttggtttg 12884859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 27962580 - 27962526
Alignment:
Q  89 acatatttttaagcaatgttttaaattttatccaacattacaattttattttcatc 144  Q
    |||||||||||| ||||||||| ||||| ||||||| |||||||||||||||||||    
T  27962580 acatatttttaa-caatgtttttaatttcatccaacgttacaattttattttcatc 27962526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 274
Target Start/End: Original strand, 1331242 - 1331339
Alignment:
Q  176 aaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    ||||| ||||||||||||||| |||||   ||||||||  |||||||||| ||||| || ||| |  || ||||||||||||||||||||| |||||||    
T  1331242 aaaacgtggacaaaaagtaattctattatgtaagaaatgtaaaagactaagatttt-attattctttaaaagttcaagtagcacataaatatatttttg 1331339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 410
Target Start/End: Complemental strand, 12041288 - 12041190
Alignment:
Q  312 ttgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtt 410  Q
    ||||| |||||| |||||||||||||| ||| |||||||| || | ||||||| | | ||||||| |  | ||||||||| |||||| |||||||||||    
T  12041288 ttgtcgttttataaaagttttcattgagtttctatgagtaatggtctagatgacatagatttaattaaagtttttcttatgttgcggtttggtttggtt 12041190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 412
Target Start/End: Original strand, 13194291 - 13194388
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttatattgcggattggtttggtttg 412  Q
    ||||||||||| ||||||| |||||| ||| ||||||||||| | ||| ||||  ||||||||| |  | ||||||||| ||| || |||||||||||||    
T  13194291 tgtcattttataaaagtttccattgattttctatgagtattggtctaggtgat--atatttaattaaagtttttcttatgttgtggtttggtttggtttg 13194388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 274
Target Start/End: Complemental strand, 15320514 - 15320327
Alignment:
Q  91 atatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaa-ataaaacatg----ga 185  Q
    |||||||||| ||| ||||||||||| ||||||||||||||||| |||||||    | ||  ||  |||||||||| ||||||  |||||| ||     |    
T  15320514 atatttttaa-caacgttttaaatttcatccaacattacaatttcattttcaattaaaaaaatttccaactacatacaccaaatttaaaacgtgaaaaaa 15320416  T
Q  186 caaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcatt-atcgaagagttcaagtagcacataaatacatttttg 274  Q
     ||||||||||| |||||  |||||||||||||||||||| ||||||| |||| |   || ||||||||||||| ||||||||| |||||    
T  15320415 aaaaaagtaatcatattttgtaagaaatacaaaagactaagattttaa-cattcactaaaaagttcaagtagcatataaatacacttttg 15320327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 30759530 - 30759490
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttca 142  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  30759530 caatattttaaatttcatccaacattacaattttattttca 30759490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 30761645 - 30761605
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttca 142  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  30761645 caatattttaaatttcatccaacattacaattttattttca 30761605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 391
Target Start/End: Original strand, 22014346 - 22014424
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaataagtgcttttcttat 391  Q
    ||||||||||| ||||||| ||||||  || ||||||||||||| ||||||| | | ||||||| | || |||||||||    
T  22014346 tgtcattttataaaagtttccattgagattctatgagtattgatctagatgacataaatttaattaatgtttttcttat 22014424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 5862436 - 5862395
Alignment:
Q  233 atcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||| || || |||||||||||||||||||||||||||||    
T  5862436 atcattctctaatagttcaagtagcacataaatacatttttg 5862395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 17763002 - 17763092
Alignment:
Q  182 tggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaatacatttttg 274  Q
    |||||||||||||||||||||  |||||||||  |||||||||| ||||  |||||| |  ||   |||||||||||| ||| ||||||||||    
T  17763002 tggacaaaaagtaatcctattatataagaaatgtaaaagactaacattt--atcattctataaattttcaagtagcacgtaagtacatttttg 17763092  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 43452327 - 43452364
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattt 139  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  43452327 caatgttttaaatttcatccaacaatacaattttattt 43452364  T

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Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 11651030 - 11651070
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttca 142  Q
    ||||||||||||||| ||| || ||||||||||||||||||    
T  11651030 caatgttttaaatttcatctaatattacaattttattttca 11651070  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 28790696 - 28790736
Alignment:
Q  102 caatgttttaaattttatccaacattacaattttattttca 142  Q
    |||| |||||||||| |||||||||| ||||||||||||||    
T  28790696 caatattttaaatttcatccaacattgcaattttattttca 28790736  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 36075860 - 36075899
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtatt 353  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  36075860 tgtcattttat-aaagttatcattgaatttttatgagtatt 36075899  T

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Target: scaffold0015 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 75 - 266
Target Start/End: Original strand, 62561 - 62752
Alignment:
Q  75 aaagctaaaacacaacatatttttaagcaatgttttaaattttatccaacattacaattttattttcatccgacaatgttctcaactacatagaccaaa- 173  Q
    |||| |||||||||| ||||||| | |||||||||||||||| |||||||||||| ||||||||||||||  ||||||| | ||||||| || ||||||     
T  62561 aaagataaaacacaatatattttca-gcaatgttttaaatttcatccaacattacgattttattttcatcaaacaatgtacccaactacgtacaccaaag 62659  T
Q  174 ataaaacatggacaaaaagtaatcctatttgataagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaata 266  Q
     | |||| |||||||||||||||   ||||  ||| || |||||||||||||| |||| |||||| |  |||||||||| || |||| |||||    
T  62660 tttaaacgtggacaaaaagtaattaaattttgtaaaaattacaaaagactaaattttttatcattctttaagagttcaaataccacaaaaata 62752  T

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Target: scaffold0210 (Bit Score: 32; Significance: 0.00000001; HSPs: 4)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 266
Target Start/End: Complemental strand, 20436 - 20377
Alignment:
Q  207 aagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaata 266  Q
    |||||||||||| |||||||||||  |||||| |  |||||||||| |||||||||||||    
T  20436 aagaaatacaaatgactaaaatttgtatcattctgtaagagttcaattagcacataaata 20377  T

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Target: scaffold0210; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 266
Target Start/End: Complemental strand, 28328 - 28269
Alignment:
Q  207 aagaaatacaaaagactaaaattttaatcattatcgaagagttcaagtagcacataaata 266  Q
    |||||||||||| |||||||||||  |||||| |  |||||||||| |||||||||||||    
T  28328 aagaaatacaaatgactaaaatttgtatcattctgtaagagttcaattagcacataaata 28269  T

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Target: scaffold0210; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 375
Target Start/End: Complemental strand, 20326 - 20266
Alignment:
Q  315 tcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaa 375  Q
    |||||||||||||| || |||||| |||  |||| ||||| ||||||||||| ||||||||    
T  20326 tcattttattaaaggttacattgagtttccatgaatattggtttagatgatatatatttaa 20266  T

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Target: scaffold0210; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 375
Target Start/End: Complemental strand, 28218 - 28158
Alignment:
Q  315 tcattttattaaagttttcattgaatttttatgagtattgatttagatgatagatatttaa 375  Q
    |||||||||||||| || |||||| |||  |||| ||||| ||||||||||| ||||||||    
T  28218 tcattttattaaaggttacattgagtttccatgaatattggtttagatgatatatatttaa 28158  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 359
Target Start/End: Original strand, 428032 - 428078
Alignment:
Q  313 tgtcattttattaaagttttcattgaatttttatgagtattgattta 359  Q
    ||||||||||| |||||||||||||| |||| |||||||||| ||||    
T  428032 tgtcattttataaaagttttcattgagttttaatgagtattggttta 428078  T

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Target: scaffold0059 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 17839 - 17787
Alignment:
Q  106 gttttaaattttatccaacattacaattttattttcatccgacaatgttctca 158  Q
    |||| |||||| ||||||||||||||  | |||||||||| ||||||||||||    
T  17839 gtttcaaatttaatccaacattacaacctcattttcatccaacaatgttctca 17787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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