View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6151_low_3 (Length: 254)

Name: NF6151_low_3
Description: NF6151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6151_low_3
NF6151_low_3
[»] scaffold1427 (1 HSPs)
scaffold1427 (202-254)||(429-481)
[»] chr7 (25 HSPs)
chr7 (202-254)||(18606588-18606640)
chr7 (202-254)||(18871547-18871599)
chr7 (202-254)||(29795413-29795465)
chr7 (202-254)||(29799232-29799284)
chr7 (204-254)||(11660569-11660619)
chr7 (204-254)||(13255217-13255267)
chr7 (202-254)||(14565338-14565390)
chr7 (202-254)||(23666318-23666370)
chr7 (207-254)||(48742929-48742976)
chr7 (204-254)||(10897673-10897723)
chr7 (204-254)||(14420989-14421039)
chr7 (204-252)||(146752-146800)
chr7 (207-254)||(16109749-16109796)
chr7 (207-254)||(29003578-29003625)
chr7 (207-254)||(34956892-34956939)
chr7 (204-254)||(11302465-11302515)
chr7 (205-254)||(16572857-16572906)
chr7 (205-254)||(16592756-16592805)
chr7 (204-252)||(15166408-15166456)
chr7 (207-254)||(833773-833820)
chr7 (207-254)||(1198953-1199000)
chr7 (206-254)||(13850352-13850400)
chr7 (214-254)||(16007681-16007721)
chr7 (207-254)||(837802-837849)
chr7 (207-254)||(1202982-1203029)
[»] chr6 (11 HSPs)
chr6 (202-254)||(12941471-12941523)
chr6 (204-254)||(221392-221442)
chr6 (204-254)||(23351758-23351808)
chr6 (204-254)||(24266445-24266495)
chr6 (202-254)||(4476046-4476098)
chr6 (207-254)||(29848929-29848976)
chr6 (204-254)||(13763617-13763667)
chr6 (204-254)||(28290721-28290771)
chr6 (207-254)||(16133882-16133929)
chr6 (207-254)||(19444558-19444605)
chr6 (207-254)||(29417326-29417373)
[»] chr5 (16 HSPs)
chr5 (202-254)||(23113179-23113231)
chr5 (202-254)||(38146195-38146247)
chr5 (202-254)||(41878428-41878480)
chr5 (202-254)||(9775101-9775153)
chr5 (204-252)||(22358478-22358526)
chr5 (204-254)||(19510664-19510714)
chr5 (204-254)||(22469508-22469558)
chr5 (204-254)||(37599785-37599835)
chr5 (204-254)||(42959717-42959767)
chr5 (207-254)||(10816060-10816107)
chr5 (207-254)||(23538059-23538106)
chr5 (204-254)||(22749363-22749413)
chr5 (204-254)||(24277922-24277972)
chr5 (204-254)||(24384241-24384291)
chr5 (205-254)||(22335793-22335842)
chr5 (205-254)||(22339331-22339380)
[»] chr4 (16 HSPs)
chr4 (202-254)||(15533469-15533521)
chr4 (204-254)||(15989484-15989534)
chr4 (204-254)||(18211877-18211927)
chr4 (204-254)||(24048126-24048176)
chr4 (202-254)||(36037202-36037254)
chr4 (202-254)||(49548859-49548911)
chr4 (207-254)||(4832014-4832061)
chr4 (207-254)||(4835309-4835356)
chr4 (207-254)||(14047474-14047521)
chr4 (207-254)||(30146038-30146085)
chr4 (204-238)||(17142574-17142608)
chr4 (204-254)||(20900142-20900192)
chr4 (204-254)||(27027292-27027342)
chr4 (204-254)||(33685130-33685180)
chr4 (204-254)||(3336815-3336865)
chr4 (204-248)||(13881147-13881191)
[»] chr3 (18 HSPs)
chr3 (202-254)||(3802220-3802272)
chr3 (202-254)||(9532508-9532560)
chr3 (202-254)||(12304424-12304476)
chr3 (202-254)||(14764572-14764624)
chr3 (204-254)||(10834717-10834767)
chr3 (204-254)||(18899719-18899769)
chr3 (202-254)||(54519847-54519899)
chr3 (204-254)||(20249676-20249726)
chr3 (204-254)||(29545694-29545744)
chr3 (202-254)||(23372320-23372372)
chr3 (202-254)||(51299783-51299835)
chr3 (207-254)||(13026907-13026954)
chr3 (207-254)||(17548788-17548835)
chr3 (204-254)||(1989811-1989861)
chr3 (204-254)||(38312663-38312713)
chr3 (207-254)||(34853115-34853162)
chr3 (204-254)||(23396577-23396627)
chr3 (204-254)||(180080-180130)
[»] chr2 (12 HSPs)
chr2 (202-254)||(10686066-10686118)
chr2 (202-254)||(20260507-20260559)
chr2 (205-254)||(19663268-19663317)
chr2 (207-254)||(26895971-26896018)
chr2 (204-254)||(6481986-6482036)
chr2 (204-254)||(6485453-6485503)
chr2 (205-254)||(6261990-6262039)
chr2 (207-254)||(6478616-6478663)
chr2 (204-254)||(9240919-9240969)
chr2 (207-252)||(22702738-22702783)
chr2 (204-254)||(23374666-23374716)
chr2 (209-254)||(10040527-10040572)
[»] scaffold0338 (1 HSPs)
scaffold0338 (204-254)||(4439-4489)
[»] scaffold0337 (1 HSPs)
scaffold0337 (204-254)||(10601-10651)
[»] scaffold0216 (1 HSPs)
scaffold0216 (204-254)||(20968-21018)
[»] chr1 (14 HSPs)
chr1 (204-254)||(19209253-19209303)
chr1 (204-254)||(28311850-28311900)
chr1 (204-254)||(16371127-16371177)
chr1 (207-254)||(13529124-13529171)
chr1 (204-254)||(20439023-20439073)
chr1 (207-254)||(29534179-29534226)
chr1 (207-254)||(32649529-32649576)
chr1 (204-254)||(16400393-16400443)
chr1 (204-254)||(18251856-18251906)
chr1 (204-254)||(18269859-18269909)
chr1 (204-254)||(18274537-18274587)
chr1 (204-253)||(16397625-16397674)
chr1 (204-254)||(20900680-20900730)
chr1 (204-254)||(28204966-28205016)
[»] scaffold0607 (1 HSPs)
scaffold0607 (204-254)||(2406-2456)
[»] scaffold0089 (1 HSPs)
scaffold0089 (204-254)||(1558-1608)
[»] scaffold0026 (1 HSPs)
scaffold0026 (204-254)||(109803-109853)
[»] scaffold0012 (1 HSPs)
scaffold0012 (204-254)||(223884-223934)
[»] chr8 (12 HSPs)
chr8 (204-254)||(20453899-20453949)
chr8 (204-254)||(44475901-44475951)
chr8 (204-254)||(44479163-44479213)
chr8 (204-252)||(20459521-20459569)
chr8 (204-254)||(21862065-21862115)
chr8 (204-252)||(8729482-8729530)
chr8 (204-254)||(32949394-32949444)
chr8 (204-254)||(43111685-43111735)
chr8 (204-254)||(44431311-44431361)
chr8 (214-254)||(38186350-38186390)
chr8 (204-254)||(19881557-19881607)
chr8 (204-254)||(28853317-28853367)
[»] scaffold0544 (1 HSPs)
scaffold0544 (202-254)||(3293-3345)
[»] scaffold0970 (1 HSPs)
scaffold0970 (207-254)||(3752-3799)
[»] scaffold0188 (1 HSPs)
scaffold0188 (207-254)||(895-942)
[»] scaffold0117 (1 HSPs)
scaffold0117 (207-254)||(41546-41593)
[»] scaffold0021 (1 HSPs)
scaffold0021 (207-254)||(145780-145827)
[»] scaffold0124 (1 HSPs)
scaffold0124 (204-254)||(37403-37453)
[»] scaffold0042 (1 HSPs)
scaffold0042 (204-254)||(50454-50504)
[»] scaffold0447 (1 HSPs)
scaffold0447 (209-254)||(13666-13711)
[»] scaffold0383 (1 HSPs)
scaffold0383 (209-254)||(11661-11706)
[»] scaffold0825 (1 HSPs)
scaffold0825 (204-254)||(2158-2208)
[»] scaffold0034 (1 HSPs)
scaffold0034 (204-254)||(35273-35323)
[»] scaffold0003 (1 HSPs)
scaffold0003 (204-254)||(137279-137329)
[»] scaffold0635 (1 HSPs)
scaffold0635 (209-254)||(6498-6543)


Alignment Details
Target: scaffold1427 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 429 - 481
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  429 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 18606588 - 18606640
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18606588 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 18606640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 18871547 - 18871599
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18871547 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 18871599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 29795413 - 29795465
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29795413 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 29795465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 29799232 - 29799284
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29799232 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 29799284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 11660569 - 11660619
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11660569 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 11660619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 13255217 - 13255267
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13255217 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 13255267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 14565338 - 14565390
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14565338 ttaacaataatgttcttacttctttaactttagtaatacttactaattcaacc 14565390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 23666370 - 23666318
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23666370 ttaacaataatgttattacttctttaactttagtaacacttactaattcaacc 23666318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 48742929 - 48742976
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48742929 aataatgttcttacttctttaactttagtaacacttactaattcaacc 48742976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 10897723 - 10897673
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10897723 aacaataatgttcttacttctttaactttagtaacacttgctaattcaacc 10897673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 14420989 - 14421039
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14420989 aacaataatgttcttacttctttaactttagtaacacttgctaattcaacc 14421039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 146752 - 146800
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaa 252  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  146752 aacaataatgttcttacttctttaactttagtaacacttgctaattcaa 146800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 16109796 - 16109749
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  16109796 aataatattcttacttctttaactttagtaacacttactaattcaacc 16109749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 29003578 - 29003625
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  29003578 aataatattcttacttctttaactttagtaacacttactaattcaacc 29003625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 34956892 - 34956939
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  34956892 aataatattcttacttctttaactttagtaacacttactaattcaacc 34956939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 11302465 - 11302515
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  11302465 aacaataatgttcttacttctttaactttagtaacgcttgctaattcaacc 11302515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 16572857 - 16572906
Alignment:
Q  205 acaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  16572857 acaataatgttcttacttcttcaactttaataacacttactaattcaacc 16572906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 16592805 - 16592756
Alignment:
Q  205 acaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  16592805 acaataatgttcttacttcttcaactttaataacacttactaattcaacc 16592756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 15166408 - 15166456
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaa 252  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  15166408 aacaataatattcttacttctttaactttagtaacacttgctaattcaa 15166456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 833820 - 833773
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  833820 aataatattcttacttctttaactttagtaacacttattaattcaacc 833773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 1199000 - 1198953
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  1199000 aataatattcttacttctttaactttagtaacacttattaattcaacc 1198953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 13850400 - 13850352
Alignment:
Q  206 caataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||||||||    
T  13850400 caataatgttcatacttcttcaactttaataacacttactaattcaacc 13850352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 16007681 - 16007721
Alignment:
Q  214 ttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  16007681 ttcttacttctttaactttagtaacacttgctaattcaacc 16007721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 837849 - 837802
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  837849 aataatattcttacttctttaactttattaacacttattaattcaacc 837802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 1203029 - 1202982
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  1203029 aataatattcttacttctttaactttattaacacttattaattcaacc 1202982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 12941471 - 12941523
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12941471 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 12941523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 221392 - 221442
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  221392 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 221442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 23351758 - 23351808
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23351758 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 23351808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 24266445 - 24266495
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24266445 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 24266495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 4476046 - 4476098
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  4476046 ttaacaataatgttcttacttcttaatctttagtaacacttactaattcaacc 4476098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 29848976 - 29848929
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29848976 aataatgtttttacttctttaactttagtaacacttactaattcaacc 29848929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 13763617 - 13763667
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  13763617 aacaataatgttcttacttctttaactttagcaacacttactaatttaacc 13763667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 28290771 - 28290721
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  28290771 aacaataatgttcttacttctttaactttagtaacgcttgctaattcaacc 28290721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 16133929 - 16133882
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||    
T  16133929 aataatgttcctacttctttaactttagtaacacttattaattcaacc 16133882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 19444605 - 19444558
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||    
T  19444605 aataatcttcctacttctttaactttagtaacacttactaattcaacc 19444558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 29417373 - 29417326
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||    
T  29417373 aataatattcttacttctttaattttagtaacacttactaattcaacc 29417326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 23113231 - 23113179
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23113231 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 23113179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 38146247 - 38146195
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38146247 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 38146195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 41878480 - 41878428
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41878480 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 41878428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 9775101 - 9775153
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9775101 ttaacaataatgttattacttctttaactttagtaacacttactaattcaacc 9775153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 22358526 - 22358478
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaa 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22358526 aacaataatgttcttacttctttaactttagtaacacttactaattcaa 22358478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 19510664 - 19510714
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19510664 aacaataatgttcttacttctttaactttagtaacacttgctaattcaacc 19510714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 22469508 - 22469558
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22469508 aacaataatattcttacttctttaactttagtaacacttactaattcaacc 22469558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 37599835 - 37599785
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37599835 aacaataatgttcttacttctttaactttagtaacacttgctaattcaacc 37599785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 42959717 - 42959767
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  42959717 aacaataatgttcttacttctttaactttagtaacactttctaattcaacc 42959767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 10816060 - 10816107
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  10816060 aataatattcttacttctttaactttagtaacacttactaattcaacc 10816107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 23538059 - 23538106
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  23538059 aataatattcttacttctttaactttagtaacacttactaattcaacc 23538106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 22749363 - 22749413
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  22749363 aacaataatattcttacttctttaactttagtaacactttctaattcaacc 22749413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 24277972 - 24277922
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  24277972 aacaataatgttcttacttcttcaactttaataacacttactaattcaacc 24277922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 24384241 - 24384291
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  24384241 aacaataatgttcttacttcttcaactttaataacacttactaattcaacc 24384291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 22335793 - 22335842
Alignment:
Q  205 acaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  22335793 acaataatgttcttactcctttaactttagtaacagttactaattcaacc 22335842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 22339331 - 22339380
Alignment:
Q  205 acaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  22339331 acaataatgttcttactcctttaactttagtaacagttactaattcaacc 22339380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 15533469 - 15533521
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15533469 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 15533521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 15989484 - 15989534
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15989484 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 15989534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 18211877 - 18211927
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18211877 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 18211927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 24048176 - 24048126
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24048176 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 24048126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 36037202 - 36037254
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36037202 ttaacaataatgttcttacctctttaactttagtaacacttactaattcaacc 36037254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 49548911 - 49548859
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  49548911 ttaacaataatgttcttacttctttacctttagtaacacttactaattcaacc 49548859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 4832061 - 4832014
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  4832061 aataatattcttacttctttaactttagtaacacttactaattcaacc 4832014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 4835356 - 4835309
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  4835356 aataatattcttacttctttaactttagtaacacttactaattcaacc 4835309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 14047474 - 14047521
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||    
T  14047474 aataatattcttaattctttaactttagtaacacttactaattcaacc 14047521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 30146038 - 30146085
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||    
T  30146038 aataatattcttccttctttaactttagtaacacttactaattcaacc 30146085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 238
Target Start/End: Original strand, 17142574 - 17142608
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaac 238  Q
    |||||||||||||||||||||||||||||||||||    
T  17142574 aacaataatgttcttacttctttaactttagtaac 17142608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 20900192 - 20900142
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||| |||||||| ||||||| ||||||||| ||||||||||    
T  20900192 aacaataatgttcatacttcttcaactttaataacacttattaattcaacc 20900142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 27027292 - 27027342
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||| |||||||| ||||||| ||||||||| ||||||||||    
T  27027292 aacaataatgttcatacttcttcaactttaataacacttattaattcaacc 27027342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 33685180 - 33685130
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||| |||||||| ||||||| |||||||||||||| |||||    
T  33685180 aacaataatgttcatacttcttcaactttaataacacttactaatccaacc 33685130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 3336815 - 3336865
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||   |||||| ||||||| ||||||||||||||||||||    
T  3336815 aacaataatgttcacgcttcttcaactttaataacacttactaattcaacc 3336865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 13881147 - 13881191
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaat 248  Q
    ||||||||||||| |||||||| || |||| ||||||||||||||    
T  13881147 aacaataatgttcatacttcttcaattttaataacacttactaat 13881191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 3802220 - 3802272
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3802220 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 3802272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 9532508 - 9532560
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9532508 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 9532560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 12304424 - 12304476
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12304424 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 12304476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 14764624 - 14764572
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14764624 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 14764572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 10834767 - 10834717
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10834767 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 10834717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 18899719 - 18899769
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18899719 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 18899769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 54519847 - 54519899
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  54519847 ttaacaataatgttcttacttctttacctttagtaacacttactaattcaacc 54519899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 20249726 - 20249676
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20249726 aacaataatgttcttacttctttaactttagtaacacttgctaattcaacc 20249676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 29545744 - 29545694
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29545744 aacaataatgttcttacttctttaactttagtaacacttgctaattcaacc 29545694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 23372372 - 23372320
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  23372372 ttaacaataatgttcttacttcttaatctttagtaacacttactaattcaacc 23372320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 51299783 - 51299835
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  51299783 ttaacaataatgttcttacttcttaatctttagtaacacttactaattcaacc 51299835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 13026954 - 13026907
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  13026954 aataatattcttacttctttaactttagtaacacttactaattcaacc 13026907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 17548835 - 17548788
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  17548835 aataatgttcctacttctttaactttagtaacacttactaattcaacc 17548788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 1989861 - 1989811
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  1989861 aacaataatattcttacttctttaactttattaacacttactaattcaacc 1989811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 38312713 - 38312663
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  38312713 aacaataatgttcttacttctttaactttagtaacacttgttaattcaacc 38312663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 34853162 - 34853115
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||    
T  34853162 aataatattcttacttctttaattttagtaacacttactaattcaacc 34853115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 23396627 - 23396577
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||| |||||||| ||||||| ||||||||| ||||||||||    
T  23396627 aacaataatgttcatacttcttcaactttaataacacttattaattcaacc 23396577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 180130 - 180080
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||  ||||||| | ||||| ||||||||||||||||||||    
T  180130 aacaataatgttcacacttcttcagctttaataacacttactaattcaacc 180080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 10686118 - 10686066
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10686118 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 10686066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 20260507 - 20260559
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20260507 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 20260559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 19663317 - 19663268
Alignment:
Q  205 acaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19663317 acaataatgttcttacttctttaactttagtaacacttactaattcaacc 19663268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 26895971 - 26896018
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26895971 aataatgttcttacttctttaactttagtaacacttactaattcaacc 26896018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 6481986 - 6482036
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6481986 aacaataatgttcttacttctttaactttagtaacacttgctaattcaacc 6482036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 6485453 - 6485503
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6485453 aacaataatgttcttacttctttaactttagtaacacttgctaattcaacc 6485503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 6262039 - 6261990
Alignment:
Q  205 acaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6262039 acaataatgttcttacttctttaactttagtaacagttactaattcaacc 6261990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 6478663 - 6478616
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  6478663 aataatgttcctacttctttaactttagtaacacttactaattcaacc 6478616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 9240919 - 9240969
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  9240919 aacaataatgttcttacttctttaactttagtaacacttgctagttcaacc 9240969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 22702738 - 22702783
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaa 252  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  22702738 aataatattcttacttctttaactttagtaacacttactaattcaa 22702783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 23374666 - 23374716
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||| ||||||| |||||||| ||||||| ||||||||||||||||||||    
T  23374666 aacaaaaatgttcatacttcttcaactttaataacacttactaattcaacc 23374716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 10040572 - 10040527
Alignment:
Q  209 taatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||| ||| |||||||  ||||||||||||||||||||||||||||    
T  10040572 taatattcatacttctacaactttagtaacacttactaattcaacc 10040527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 4489 - 4439
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4489 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 4439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 10651 - 10601
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10651 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 10601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 20968 - 21018
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20968 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 21018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 19209253 - 19209303
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19209253 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 19209303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 28311850 - 28311900
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28311850 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 28311900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 16371127 - 16371177
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16371127 aacaataatgttcttacttctttaactttagtaacacttgctaattcaacc 16371177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 13529171 - 13529124
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  13529171 aataatgttcctacttctttaactttagtaacacttactaattcaacc 13529124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 20439073 - 20439023
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  20439073 aacaataatgttctaacttctttaactttagtaacacttgctaattcaacc 20439023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 29534179 - 29534226
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  29534179 aataatattcttacttctttaactttagtaacacttactaattaaacc 29534226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 32649529 - 32649576
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||| |||||| |||||||| |||||||||||||||||||||||||    
T  32649529 aataatattcttaattctttaattttagtaacacttactaattcaacc 32649576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 16400393 - 16400443
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||| ||||||| ||||||| || |||||||||||||||||    
T  16400393 aacaataatgttctcacttcttcaactttaatagcacttactaattcaacc 16400443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 18251856 - 18251906
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||| |||||||| ||||||| ||||||||| ||||||||||    
T  18251856 aacaataatgttcatacttcttcaactttaataacacttattaattcaacc 18251906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 18269859 - 18269909
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||| |||||||| ||||||| ||||||||| ||||||||||    
T  18269859 aacaataatgttcatacttcttcaactttaataacacttattaattcaacc 18269909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 18274537 - 18274587
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||| |||||||| ||||||| ||||||||| ||||||||||    
T  18274537 aacaataatgttcatacttcttcaactttaataacacttattaattcaacc 18274587  T

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Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 16397674 - 16397625
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaac 253  Q
    ||||||||||||| |||||||| ||||||| || ||||||||||||||||    
T  16397674 aacaataatgttcatacttcttcaactttaatagcacttactaattcaac 16397625  T

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Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 20900680 - 20900730
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||| ||| |||| ||||||| ||||||||| ||||||||||    
T  20900680 aacaataatgttcatacctcttcaactttaataacacttattaattcaacc 20900730  T

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Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 28205016 - 28204966
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||| |||||||| || |||| |||||||||||||| |||||    
T  28205016 aacaataatgttcatacttcttcaaatttaataacacttactaatccaacc 28204966  T

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Target: scaffold0607 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 2406 - 2456
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2406 aacaataatgttcttacttctttaactttagaaacacttactaattcaacc 2456  T

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Target: scaffold0089 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 1558 - 1608
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1558 aacaataatgttcttacttctttaactttagtaacacttgctaattcaacc 1608  T

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Target: scaffold0026 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 109803 - 109853
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  109803 aacaataatgttcttacttctttaactttagtaacacttgctaattcaacc 109853  T

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Target: scaffold0012 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 223934 - 223884
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  223934 aacaataatgttcttacttctttaactttagtaactcttactaattcaacc 223884  T

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Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 20453899 - 20453949
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20453899 aacaataatgttcttacttctttaactttagtagcacttactaattcaacc 20453949  T

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Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 44475901 - 44475951
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  44475901 aacaataatgttcttacttctttaactttagtaacacttgctaattcaacc 44475951  T

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Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 44479163 - 44479213
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  44479163 aacaataatgttcttacttctttaactttagtaacacttgctaattcaacc 44479213  T

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Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 20459521 - 20459569
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaa 252  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20459521 aacaataatgttgttacttctttaactttagtaacacttactaattcaa 20459569  T

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Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 21862115 - 21862065
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  21862115 aacaataatgttcttacttctttccctttagtaacacttactaattcaacc 21862065  T

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Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 8729530 - 8729482
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaa 252  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  8729530 aacaataatattcttacttctttaactttagtaacacttgctaattcaa 8729482  T

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Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 32949394 - 32949444
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||  ||||||| ||||||| ||||||||||||||||||||    
T  32949394 aacaataatgttcacacttcttcaactttaataacacttactaattcaacc 32949444  T

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Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 43111685 - 43111735
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||| |||||||| ||||| | ||||||||||||||||||||    
T  43111685 aacaataatgttcatacttcttcaacttaaataacacttactaattcaacc 43111735  T

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Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 44431311 - 44431361
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||| |||| ||| |||||||| ||||||||||||||||||||||||||||    
T  44431311 aacattaatattcatacttcttcaactttagtaacacttactaattcaacc 44431361  T

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Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 38186390 - 38186350
Alignment:
Q  214 ttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  38186390 ttcttacttcattaactttggtaacacttactaattcaacc 38186350  T

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Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 19881557 - 19881607
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||| |||  ||||||| ||||||| ||||||||||||||||||||    
T  19881557 aacaataatattcacacttcttcaactttaataacacttactaattcaacc 19881607  T

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Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 28853317 - 28853367
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||| ||| |||||||| |||||||||||| |||||||| ||||||    
T  28853317 aacaataatattcatacttcttcaactttagtaactcttactaaatcaacc 28853367  T

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Target: scaffold0544 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 3345 - 3293
Alignment:
Q  202 ttaacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  3345 ttaacaataatgttcttacttcttaatctttagtaacacttactaattcaacc 3293  T

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Target: scaffold0970 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 3752 - 3799
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  3752 aataatgttcctacttctttaactttagtaacacttactaattcaacc 3799  T

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Target: scaffold0188 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 942 - 895
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  942 aataattttcttacttctttaactttagtaacacttactaattcaacc 895  T

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Target: scaffold0117 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 41593 - 41546
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  41593 aataatgttcctacttctttaactttagtaacacttactaattcaacc 41546  T

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Target: scaffold0021 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 145780 - 145827
Alignment:
Q  207 aataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  145780 aataatattcttacttctttaactttagtaacacttactaattcaacc 145827  T

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Target: scaffold0124 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 37453 - 37403
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  37453 aacaataatgttcttacttctttaactttagtaacacttgttaattcaacc 37403  T

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Target: scaffold0042 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 50454 - 50504
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||||||||  ||||||| ||||||||||||||||||||||||||||    
T  50454 aacaataatgttcacacttcttcaactttagtaacacttactaattcaacc 50504  T

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Target: scaffold0447 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 13666 - 13711
Alignment:
Q  209 taatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||    
T  13666 taatgttcatacttcttcaactttagtaacacttactaattcaacc 13711  T

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Target: scaffold0383 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 11661 - 11706
Alignment:
Q  209 taatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||    
T  11661 taatgttcatacttcttcaactttagtaacacttactaattcaacc 11706  T

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Target: scaffold0825 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 2208 - 2158
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||| || ||||| ||||||| ||||||||||||||||||||    
T  2208 aacaataatgttcataattcttcaactttaataacacttactaattcaacc 2158  T

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Target: scaffold0034 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 35323 - 35273
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    ||||||||||||| |||||||| ||||||| |||||||||||||| |||||    
T  35323 aacaataatgttcatacttcttcaactttaataacacttactaatccaacc 35273  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 137279 - 137329
Alignment:
Q  204 aacaataatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||| |||| ||| |||||||| ||||||||||||||||||||||||||||    
T  137279 aacattaatattcatacttcttcaactttagtaacacttactaattcaacc 137329  T

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Target: scaffold0635 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 6498 - 6543
Alignment:
Q  209 taatgttcttacttctttaactttagtaacacttactaattcaacc 254  Q
    |||| ||| |||||||  ||||||||||||||||||||||||||||    
T  6498 taatattcatacttctacaactttagtaacacttactaattcaacc 6543  T

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