View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6152_high_14 (Length: 237)
Name: NF6152_high_14
Description: NF6152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6152_high_14 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 40 - 210
Target Start/End: Complemental strand, 36009654 - 36009484
Alignment:
| Q |
40 |
tcaaattgagatccgtacccatcaccccttctacaaacctccgccttcaacccgctgttgaccgctgtgcgccgcctccctgcttgtcgtgtgccgccca |
139 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36009654 |
tcaaattgagatccgtacccatcaccccttccacaaacctccgccttcaacctgctgttgaccgctgtgcgccgcctccctgcttgtcgtgtgccgccca |
36009555 |
T |
|
| Q |
140 |
tcttcccttcttcaccgttcagtcaaggttgtttactgggtaaaaatcacaacttactggtattttctaat |
210 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
36009554 |
tcttcccttcttcatcgttcagtcaaggttgtttactgggtaaaaatcacagcttactggtattttctaat |
36009484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University