View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6152_high_9 (Length: 254)
Name: NF6152_high_9
Description: NF6152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6152_high_9 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 21481737 - 21481982
Alignment:
| Q |
9 |
gaagaatattaaaaagaatgtaaaatatgaaaatcggtttgaaccaaccacggtttaacccgaggattcacaattcaattagttgaatgggatgagttta |
108 |
Q |
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| T |
21481737 |
gaagaatattaaaaagaatgtaaaatatgaaaatcggtttgaaccaaccacggtttaacccgaggattcacaattcaatgagttgaacgggatgagttta |
21481836 |
T |
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| Q |
109 |
gtctggttttttaaaactttggtttgatctcgattcaattacgccgggaactaggaaatccaaatccatgaaaattaagtaaaagaaaacattataagag |
208 |
Q |
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| T |
21481837 |
gtctggttttttaaaactttggtttgatctcgattcaattacgccgggaactaggaaatccaaatccatgaacattaagtaaaagaaaacattataagag |
21481936 |
T |
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| Q |
209 |
aaggctcttacaaatttgccacacttcacatcagaatatatcacta |
254 |
Q |
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| T |
21481937 |
aaggctcttacaaatttgccacacttcacatcagaatatatcacta |
21481982 |
T |
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