View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6152_low_6 (Length: 330)
Name: NF6152_low_6
Description: NF6152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6152_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 11 - 305
Target Start/End: Complemental strand, 32386834 - 32386540
Alignment:
| Q |
11 |
catcatcactgtgcatgataaccaagtggaagtacccatctttcattctgccacataaattcacaaaagattctatttttagcaatagtaacgtttttcc |
110 |
Q |
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| T |
32386834 |
catcatcactgtgcatgataaccaagtggaagtacccatctttcattctgccacatagattcacaaaagattctatttttagcaatagtaacgtttttct |
32386735 |
T |
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| Q |
111 |
gtttctggggtgtgaagagttcactccagtcgtcatttttcattacccaatggagaaaaaattgatctttttggtgacccttttgggatttctcttctat |
210 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
32386734 |
gtttctggggtgtgaagagttcactccactcgtcatttttcatcacccaatggagaaaaaattgatctttgtggtgacccttttgggatttctcttctat |
32386635 |
T |
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| Q |
211 |
ggaggagaatccaagtttatagagtataacacctcacagggtgtagtcactgggaagctcaatgttcatctggttgctcatactcatgatgatgt |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32386634 |
ggaggagaatccaagtttatagagtataacacctcacagggtgtagtctctgggaagctcaatgttcatctggttgctcatactcatgatgatgt |
32386540 |
T |
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