View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6154_low_24 (Length: 230)
Name: NF6154_low_24
Description: NF6154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6154_low_24 |
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Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 6873726 - 6873939
Alignment:
| Q |
1 |
cataataccttcctcccataagttaacaagagtcttgacttgtttaatttttcaaaggtgaacaaggtttctaaatgaaaccaaagctttgatattcaga |
100 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
6873726 |
cataataccttcctctcataagttaacaagagtcttgacttgtttaatttttcaaaggcaaacaaggtttctaaatgaaaccaaagctttgatattcaga |
6873825 |
T |
|
| Q |
101 |
aggaacataaaaacagaagcctcgctcctttcaacacagaaaacatgaaaaattaaaatgaccttcgtataactatagtattctaagcaataacttctct |
200 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
6873826 |
aggaacataaaaacagaagcctcactcctttcaacacagaaaacatgaaaaattaaaatgaccttcgtataactatagtattctaagcaataacttctct |
6873925 |
T |
|
| Q |
201 |
cataagttgaaatt |
214 |
Q |
| |
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|||||||||||||| |
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| T |
6873926 |
cataagttgaaatt |
6873939 |
T |
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