View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6155_high_13 (Length: 369)
Name: NF6155_high_13
Description: NF6155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6155_high_13 |
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Alignment Details
Target: chr2 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 4 - 350
Target Start/End: Original strand, 9086609 - 9086954
Alignment:
| Q |
4 |
atgtcgaagaatatatagtcatttgtttagaagtgtaccattctttggtgataagttgtattcttacccccctcttggaatcaactcaatgtggattttt |
103 |
Q |
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| T |
9086609 |
atgtctaagcatatatagtcatttgtttagaagtgtaccattctttggtgataagctgtattcttacccccctcttggaatcaactcaatgtggattttt |
9086708 |
T |
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| Q |
104 |
ctttgcaatattattgatccttaaaatttaaagcttgttgtaacaaatcatgagctatactatgtgcattaaccgctcattttcgccaaatttatcaatg |
203 |
Q |
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| T |
9086709 |
ctttgcaatattattgatccttaaaatgtaaagcttgttgtaacaaatcatgagctatactatgtgcattaaccgctcattttcgccaaatttatcaatg |
9086808 |
T |
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| Q |
204 |
agctcctaaacacaatcaacctctctgatagccttaatatctccnnnnnnnngtccttattccaaattttcaaagccacatttcggagctgtaacttctt |
303 |
Q |
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| T |
9086809 |
agctcctaaacacaatcaacctctctgatagccttaatatcttc-aaaaaaagtccttaatccaaattttcaaagccacatttcggagctgtaacttctt |
9086907 |
T |
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| Q |
304 |
atggagcacaagcattagattgcattagtcatatacaatagaatagg |
350 |
Q |
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||| ||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
9086908 |
atgaagcacaagcataagattgcattagtcatatacaatagaatagg |
9086954 |
T |
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