View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6155_low_10 (Length: 430)

Name: NF6155_low_10
Description: NF6155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6155_low_10
NF6155_low_10
[»] scaffold0086 (2 HSPs)
scaffold0086 (15-240)||(26303-26528)
scaffold0086 (269-417)||(26134-26283)
[»] chr7 (55 HSPs)
chr7 (268-417)||(48804634-48804784)
chr7 (265-417)||(17748387-17748540)
chr7 (265-417)||(4195207-4195360)
chr7 (265-417)||(29151891-29152044)
chr7 (268-390)||(37514899-37515022)
chr7 (271-417)||(47341827-47341974)
chr7 (299-417)||(1797411-1797529)
chr7 (268-417)||(10047884-10048034)
chr7 (269-358)||(23658189-23658279)
chr7 (268-417)||(43861980-43862130)
chr7 (268-360)||(38578875-38578968)
chr7 (276-411)||(36619270-36619406)
chr7 (268-417)||(26423296-26423445)
chr7 (265-417)||(5069820-5069973)
chr7 (265-417)||(42210267-42210420)
chr7 (268-359)||(27028288-27028380)
chr7 (268-417)||(13095809-13095959)
chr7 (268-417)||(18785620-18785770)
chr7 (268-417)||(21530699-21530849)
chr7 (268-368)||(34659226-34659327)
chr7 (270-417)||(16802074-16802222)
chr7 (268-417)||(45447921-45448071)
chr7 (275-417)||(4228769-4228909)
chr7 (268-368)||(22973967-22974068)
chr7 (265-417)||(42032047-42032200)
chr7 (268-359)||(1605950-1606042)
chr7 (297-417)||(43925463-43925583)
chr7 (268-390)||(8734694-8734817)
chr7 (268-417)||(22993375-22993525)
chr7 (268-417)||(27875096-27875245)
chr7 (270-347)||(28744183-28744261)
chr7 (271-344)||(41945497-41945571)
chr7 (265-417)||(365091-365244)
chr7 (297-417)||(19914741-19914860)
chr7 (297-368)||(49142707-49142778)
chr7 (268-341)||(3353451-3353525)
chr7 (269-365)||(39474943-39475040)
chr7 (269-417)||(43346788-43346937)
chr7 (265-327)||(24983423-24983487)
chr7 (265-359)||(4705989-4706084)
chr7 (270-368)||(14535291-14535390)
chr7 (268-390)||(21190788-21190911)
chr7 (318-417)||(22268088-22268187)
chr7 (297-368)||(30827292-30827363)
chr7 (268-417)||(39420789-39420938)
chr7 (271-368)||(3603353-3603455)
chr7 (268-348)||(28396168-28396249)
chr7 (270-358)||(32823253-32823342)
chr7 (268-347)||(48551878-48551958)
chr7 (268-417)||(22573764-22573913)
chr7 (315-386)||(9813958-9814028)
chr7 (268-417)||(14650268-14650418)
chr7 (304-358)||(44336903-44336957)
chr7 (269-345)||(45697199-45697276)
chr7 (311-366)||(24969378-24969431)
[»] chr4 (79 HSPs)
chr4 (268-417)||(14123969-14124119)
chr4 (268-417)||(29895740-29895890)
chr4 (265-417)||(52950035-52950188)
chr4 (268-417)||(38165980-38166130)
chr4 (269-417)||(47078411-47078560)
chr4 (268-417)||(2559260-2559410)
chr4 (268-417)||(8888975-8889125)
chr4 (268-417)||(43458566-43458716)
chr4 (286-417)||(1446779-1446911)
chr4 (268-367)||(3159477-3159577)
chr4 (268-368)||(7246654-7246755)
chr4 (268-389)||(20128290-20128412)
chr4 (268-417)||(21429254-21429404)
chr4 (268-417)||(33647674-33647824)
chr4 (269-417)||(20421727-20421875)
chr4 (268-367)||(16450303-16450403)
chr4 (269-360)||(40272340-40272432)
chr4 (284-417)||(8064822-8064955)
chr4 (268-417)||(13073491-13073641)
chr4 (268-417)||(24166403-24166553)
chr4 (265-366)||(29588740-29588842)
chr4 (271-368)||(49260676-49260774)
chr4 (268-417)||(53599013-53599163)
chr4 (268-360)||(40780869-40780962)
chr4 (268-411)||(295541-295684)
chr4 (268-417)||(1940785-1940932)
chr4 (265-367)||(38075436-38075539)
chr4 (268-389)||(43468328-43468450)
chr4 (268-417)||(55920987-55921137)
chr4 (265-417)||(6779164-6779317)
chr4 (271-367)||(20532420-20532517)
chr4 (268-368)||(36145223-36145324)
chr4 (297-370)||(48015111-48015184)
chr4 (270-417)||(3507224-3507371)
chr4 (268-359)||(4738629-4738721)
chr4 (270-417)||(5472858-5473006)
chr4 (265-359)||(30317244-30317339)
chr4 (268-366)||(42722585-42722684)
chr4 (268-417)||(18531472-18531622)
chr4 (265-342)||(50485971-50486049)
chr4 (268-368)||(16645120-16645221)
chr4 (270-417)||(27248381-27248527)
chr4 (269-412)||(36262776-36262918)
chr4 (297-417)||(3574484-3574604)
chr4 (297-369)||(10541017-10541089)
chr4 (282-417)||(41339417-41339553)
chr4 (268-345)||(47682390-47682468)
chr4 (269-366)||(48317284-48317382)
chr4 (265-345)||(46108716-46108797)
chr4 (269-354)||(20354653-20354739)
chr4 (270-370)||(4736597-4736698)
chr4 (280-416)||(7741879-7742016)
chr4 (271-335)||(14567274-14567339)
chr4 (268-417)||(6032651-6032798)
chr4 (297-417)||(12703583-12703703)
chr4 (270-357)||(14859304-14859392)
chr4 (297-345)||(17080068-17080116)
chr4 (265-364)||(26237427-26237527)
chr4 (265-344)||(37369047-37369127)
chr4 (268-335)||(54946284-54946352)
chr4 (297-343)||(21192667-21192713)
chr4 (268-357)||(35359749-35359839)
chr4 (289-342)||(48352538-48352592)
chr4 (297-338)||(15839973-15840014)
chr4 (268-368)||(38168259-38168359)
chr4 (302-342)||(8424582-8424622)
chr4 (268-335)||(14597908-14597976)
chr4 (268-367)||(48834708-48834807)
chr4 (269-411)||(55005317-55005458)
chr4 (306-417)||(15732495-15732606)
chr4 (268-354)||(15829715-15829802)
chr4 (265-368)||(31588686-31588792)
chr4 (271-417)||(41162893-41163040)
chr4 (275-368)||(42722394-42722487)
chr4 (297-390)||(14567939-14568032)
chr4 (265-345)||(24850632-24850713)
chr4 (297-341)||(23788426-23788470)
chr4 (297-341)||(49952184-49952228)
chr4 (297-341)||(55703790-55703834)
[»] chr2 (71 HSPs)
chr2 (268-375)||(25540412-25540520)
chr2 (268-417)||(6358159-6358309)
chr2 (268-417)||(44139432-44139582)
chr2 (265-417)||(42770656-42770809)
chr2 (270-417)||(38005350-38005498)
chr2 (268-417)||(7747222-7747372)
chr2 (272-417)||(22593083-22593228)
chr2 (268-368)||(12455307-12455408)
chr2 (269-417)||(331449-331598)
chr2 (270-366)||(10026626-10026723)
chr2 (265-368)||(11069875-11069979)
chr2 (268-417)||(8410079-8410229)
chr2 (268-417)||(37560121-37560271)
chr2 (268-368)||(10823057-10823158)
chr2 (268-368)||(12864221-12864322)
chr2 (270-417)||(34356154-34356302)
chr2 (268-358)||(16325602-16325693)
chr2 (270-368)||(38962760-38962859)
chr2 (269-415)||(41031915-41032061)
chr2 (268-417)||(3643895-3644045)
chr2 (268-417)||(18902538-18902688)
chr2 (268-417)||(39201516-39201666)
chr2 (270-386)||(35946718-35946834)
chr2 (268-368)||(41220632-41220733)
chr2 (270-417)||(10046487-10046634)
chr2 (297-417)||(45263705-45263825)
chr2 (268-417)||(7787004-7787154)
chr2 (268-417)||(16034885-16035035)
chr2 (279-368)||(39806904-39806994)
chr2 (268-417)||(20612542-20612694)
chr2 (302-417)||(15079431-15079546)
chr2 (297-411)||(2528379-2528493)
chr2 (268-417)||(21286392-21286542)
chr2 (271-368)||(29422212-29422310)
chr2 (268-368)||(9360756-9360857)
chr2 (268-360)||(10669597-10669690)
chr2 (268-360)||(14169617-14169710)
chr2 (268-348)||(27725957-27726038)
chr2 (270-357)||(28525465-28525554)
chr2 (268-392)||(28616387-28616512)
chr2 (289-411)||(25549682-25549805)
chr2 (268-417)||(44945542-44945691)
chr2 (268-417)||(2550816-2550966)
chr2 (265-370)||(3811696-3811802)
chr2 (275-367)||(3848929-3849022)
chr2 (277-345)||(24179588-24179657)
chr2 (311-411)||(19976859-19976959)
chr2 (297-417)||(21180352-21180472)
chr2 (311-417)||(40968967-40969073)
chr2 (268-417)||(44193427-44193580)
chr2 (265-402)||(13026416-13026554)
chr2 (305-417)||(2149240-2149353)
chr2 (301-366)||(29653626-29653691)
chr2 (268-368)||(34346295-34346396)
chr2 (269-417)||(37804900-37805049)
chr2 (313-417)||(14853421-14853525)
chr2 (268-343)||(20116620-20116696)
chr2 (271-345)||(16813176-16813251)
chr2 (271-345)||(16852455-16852530)
chr2 (265-355)||(26805306-26805397)
chr2 (268-361)||(34722684-34722778)
chr2 (311-368)||(15234113-15234170)
chr2 (268-375)||(2784923-2785030)
chr2 (305-341)||(29802834-29802870)
chr2 (269-368)||(33634448-33634548)
chr2 (311-390)||(41187684-41187763)
chr2 (297-360)||(43303330-43303393)
chr2 (268-389)||(34738341-34738454)
chr2 (268-368)||(18649034-18649135)
chr2 (265-345)||(33005771-33005852)
chr2 (275-330)||(36480453-36480506)
[»] scaffold0170 (1 HSPs)
scaffold0170 (269-375)||(9838-9945)
[»] chr5 (72 HSPs)
chr5 (268-417)||(42086276-42086426)
chr5 (269-417)||(19572673-19572822)
chr5 (268-417)||(1538380-1538530)
chr5 (270-367)||(9805003-9805101)
chr5 (269-410)||(4016264-4016406)
chr5 (270-375)||(23383648-23383754)
chr5 (271-389)||(12081885-12082004)
chr5 (268-417)||(20682625-20682776)
chr5 (268-417)||(5731928-5732078)
chr5 (268-417)||(8513468-8513618)
chr5 (268-417)||(18136284-18136438)
chr5 (268-417)||(20525787-20525937)
chr5 (268-368)||(25417191-25417292)
chr5 (269-368)||(38897728-38897827)
chr5 (270-417)||(41163470-41163617)
chr5 (277-417)||(7866530-7866671)
chr5 (268-367)||(42291513-42291613)
chr5 (268-411)||(42861226-42861370)
chr5 (265-371)||(21149729-21149836)
chr5 (268-417)||(37263190-37263339)
chr5 (268-357)||(40117424-40117514)
chr5 (300-417)||(28857077-28857194)
chr5 (297-417)||(7308402-7308522)
chr5 (297-368)||(18262656-18262727)
chr5 (311-405)||(11845853-11845947)
chr5 (268-417)||(30349528-30349678)
chr5 (268-348)||(39099787-39099868)
chr5 (268-348)||(43399146-43399227)
chr5 (280-375)||(14588637-14588733)
chr5 (297-417)||(26077090-26077210)
chr5 (297-417)||(30995070-30995190)
chr5 (265-368)||(18045637-18045740)
chr5 (271-347)||(24875364-24875441)
chr5 (297-390)||(25467386-25467479)
chr5 (297-390)||(35245044-35245137)
chr5 (279-390)||(5079307-5079419)
chr5 (268-359)||(24463894-24463986)
chr5 (265-360)||(24653817-24653912)
chr5 (317-368)||(1898999-1899050)
chr5 (268-342)||(3653922-3653997)
chr5 (268-390)||(13664236-13664359)
chr5 (279-345)||(14974343-14974410)
chr5 (270-355)||(32874798-32874884)
chr5 (275-343)||(9168268-9168337)
chr5 (268-358)||(21487625-21487713)
chr5 (271-375)||(41800968-41801073)
chr5 (265-368)||(15034073-15034177)
chr5 (319-411)||(38297024-38297116)
chr5 (268-417)||(14728031-14728182)
chr5 (269-367)||(18294493-18294591)
chr5 (271-417)||(35561829-35561976)
chr5 (266-344)||(43212511-43212590)
chr5 (297-375)||(7336611-7336689)
chr5 (268-417)||(12766080-12766230)
chr5 (268-345)||(20590020-20590098)
chr5 (270-342)||(20255393-20255466)
chr5 (265-357)||(31890099-31890192)
chr5 (318-367)||(40060295-40060344)
chr5 (265-368)||(2485195-2485298)
chr5 (297-341)||(6764495-6764539)
chr5 (297-345)||(25452946-25452994)
chr5 (287-370)||(35813025-35813109)
chr5 (297-345)||(38369720-38369768)
chr5 (318-368)||(16755059-16755109)
chr5 (265-366)||(20228717-20228819)
chr5 (311-353)||(20705576-20705618)
chr5 (287-360)||(23247378-23247452)
chr5 (297-367)||(35006773-35006843)
chr5 (288-357)||(35638061-35638131)
chr5 (305-366)||(35403558-35403619)
chr5 (270-345)||(7616941-7617017)
chr5 (269-344)||(21375373-21375449)
[»] chr1 (73 HSPs)
chr1 (268-417)||(41663865-41664015)
chr1 (268-417)||(49078063-49078213)
chr1 (270-366)||(17642015-17642112)
chr1 (268-417)||(8763940-8764090)
chr1 (268-417)||(26325761-26325911)
chr1 (269-417)||(40288487-40288636)
chr1 (265-417)||(5855471-5855624)
chr1 (265-392)||(18708546-18708674)
chr1 (265-360)||(50503367-50503463)
chr1 (271-417)||(2980943-2981090)
chr1 (268-368)||(18915865-18915966)
chr1 (268-368)||(10422786-10422887)
chr1 (266-390)||(15465941-15466066)
chr1 (268-360)||(43959830-43959923)
chr1 (269-368)||(14254278-14254378)
chr1 (271-417)||(11397901-11398047)
chr1 (271-417)||(12036756-12036903)
chr1 (268-390)||(33004024-33004147)
chr1 (269-367)||(33418125-33418224)
chr1 (268-417)||(9659188-9659337)
chr1 (268-368)||(37339817-37339919)
chr1 (269-349)||(10507715-10507796)
chr1 (268-368)||(26660136-26660236)
chr1 (268-360)||(30927736-30927829)
chr1 (265-360)||(10336522-10336618)
chr1 (265-368)||(13262081-13262185)
chr1 (268-375)||(16263536-16263644)
chr1 (297-417)||(18649391-18649511)
chr1 (265-368)||(32142852-32142956)
chr1 (270-408)||(34719734-34719873)
chr1 (268-333)||(4581691-4581757)
chr1 (268-360)||(21849214-21849306)
chr1 (265-417)||(32150928-32151081)
chr1 (268-368)||(45361891-45361992)
chr1 (265-417)||(46929744-46929896)
chr1 (268-367)||(2567275-2567375)
chr1 (271-366)||(9853289-9853385)
chr1 (269-348)||(16956484-16956564)
chr1 (305-417)||(41696645-41696756)
chr1 (271-366)||(48761176-48761272)
chr1 (297-409)||(48798109-48798221)
chr1 (268-358)||(17092486-17092577)
chr1 (268-368)||(35908755-35908855)
chr1 (268-417)||(10172980-10173130)
chr1 (268-345)||(50094925-50095003)
chr1 (280-368)||(31152714-31152803)
chr1 (266-417)||(32820-32972)
chr1 (287-394)||(13265910-13266018)
chr1 (268-359)||(14357762-14357854)
chr1 (287-366)||(33498867-33498947)
chr1 (265-360)||(42710144-42710240)
chr1 (297-417)||(47312938-47313057)
chr1 (268-411)||(50371843-50371987)
chr1 (297-368)||(34877988-34878059)
chr1 (268-417)||(5503980-5504130)
chr1 (265-417)||(12744529-12744682)
chr1 (265-417)||(12755519-12755672)
chr1 (268-360)||(35211181-35211274)
chr1 (273-417)||(45726447-45726592)
chr1 (305-417)||(15238153-15238265)
chr1 (302-370)||(31734285-31734352)
chr1 (316-368)||(34334353-34334405)
chr1 (311-367)||(45536707-45536763)
chr1 (297-360)||(6563447-6563510)
chr1 (266-344)||(25178583-25178662)
chr1 (268-417)||(25165351-25165499)
chr1 (265-417)||(34697284-34697437)
chr1 (301-341)||(19195391-19195431)
chr1 (297-360)||(28324619-28324682)
chr1 (318-417)||(51437418-51437517)
chr1 (301-343)||(42744801-42744843)
chr1 (281-417)||(5063866-5064002)
chr1 (268-360)||(38859125-38859218)
[»] chr6 (37 HSPs)
chr6 (280-415)||(12606384-12606520)
chr6 (268-417)||(3601036-3601186)
chr6 (268-417)||(21898600-21898750)
chr6 (268-417)||(13036012-13036162)
chr6 (268-417)||(5253231-5253381)
chr6 (268-417)||(6606105-6606255)
chr6 (268-417)||(29333147-29333296)
chr6 (270-417)||(29444775-29444923)
chr6 (268-417)||(13468885-13469035)
chr6 (268-417)||(19089450-19089600)
chr6 (268-343)||(30788861-30788937)
chr6 (268-342)||(9633633-9633708)
chr6 (268-390)||(12635793-12635916)
chr6 (269-390)||(34954628-34954750)
chr6 (270-416)||(10311479-10311626)
chr6 (269-417)||(2271312-2271459)
chr6 (268-417)||(8938663-8938813)
chr6 (268-417)||(14107366-14107516)
chr6 (268-417)||(13584454-13584607)
chr6 (297-359)||(9366461-9366523)
chr6 (268-333)||(14783428-14783494)
chr6 (268-360)||(8932670-8932763)
chr6 (268-360)||(8944136-8944229)
chr6 (297-345)||(13391310-13391358)
chr6 (297-417)||(24671904-24672024)
chr6 (268-387)||(33939993-33940113)
chr6 (265-367)||(3587950-3588053)
chr6 (311-366)||(33859371-33859426)
chr6 (271-368)||(9179747-9179845)
chr6 (270-360)||(5029826-5029917)
chr6 (309-411)||(10312701-10312803)
chr6 (269-341)||(8888910-8888983)
chr6 (277-417)||(19230576-19230715)
chr6 (268-348)||(31129198-31129279)
chr6 (268-358)||(11142614-11142705)
chr6 (327-359)||(4596143-4596175)
chr6 (297-417)||(9147253-9147373)
[»] chr8 (48 HSPs)
chr8 (268-417)||(2467126-2467276)
chr8 (265-417)||(43027257-43027410)
chr8 (265-368)||(9860000-9860104)
chr8 (268-357)||(43032913-43033003)
chr8 (268-417)||(15884564-15884713)
chr8 (265-417)||(8141054-8141207)
chr8 (265-368)||(10927607-10927711)
chr8 (268-417)||(14666079-14666229)
chr8 (268-417)||(16893889-16894037)
chr8 (268-367)||(4479304-4479403)
chr8 (270-417)||(24837194-24837342)
chr8 (302-417)||(38922457-38922572)
chr8 (268-417)||(2964028-2964178)
chr8 (268-417)||(6100424-6100574)
chr8 (268-417)||(44893286-44893436)
chr8 (268-417)||(8997552-8997702)
chr8 (268-360)||(68106-68199)
chr8 (276-368)||(6042822-6042915)
chr8 (268-348)||(13357964-13358045)
chr8 (301-417)||(1013019-1013135)
chr8 (268-359)||(18374020-18374112)
chr8 (271-417)||(14846528-14846674)
chr8 (300-411)||(34613819-34613930)
chr8 (265-417)||(26570876-26571029)
chr8 (268-390)||(3418521-3418644)
chr8 (297-347)||(7673695-7673745)
chr8 (297-411)||(13085482-13085596)
chr8 (268-417)||(17981393-17981543)
chr8 (269-366)||(34710576-34710674)
chr8 (268-368)||(45521170-45521270)
chr8 (265-360)||(6940567-6940662)
chr8 (298-349)||(8586978-8587029)
chr8 (297-368)||(33401837-33401908)
chr8 (270-342)||(23895595-23895668)
chr8 (265-417)||(27975843-27975996)
chr8 (265-417)||(28033112-28033265)
chr8 (265-353)||(43349321-43349410)
chr8 (324-417)||(44031505-44031598)
chr8 (268-359)||(16291211-16291303)
chr8 (265-327)||(8803096-8803159)
chr8 (297-368)||(34846814-34846885)
chr8 (304-358)||(20240581-20240635)
chr8 (304-358)||(20252432-20252486)
chr8 (304-341)||(18091428-18091465)
chr8 (302-339)||(34593576-34593613)
chr8 (270-417)||(10535414-10535561)
chr8 (297-417)||(29933725-29933844)
chr8 (297-369)||(33935773-33935845)
[»] chr3 (75 HSPs)
chr3 (268-417)||(6462360-6462510)
chr3 (265-417)||(29127867-29128020)
chr3 (268-415)||(29135863-29136011)
chr3 (270-417)||(30045769-30045917)
chr3 (270-417)||(30767258-30767406)
chr3 (265-387)||(49198329-49198452)
chr3 (268-417)||(10040505-10040654)
chr3 (268-417)||(13893874-13894024)
chr3 (268-417)||(28572220-28572370)
chr3 (268-417)||(45877402-45877552)
chr3 (268-417)||(54261174-54261324)
chr3 (265-417)||(7310709-7310862)
chr3 (265-417)||(47471780-47471932)
chr3 (269-417)||(51682964-51683113)
chr3 (268-417)||(25294908-25295058)
chr3 (268-417)||(15320134-15320284)
chr3 (268-361)||(50405612-50405706)
chr3 (268-368)||(7650224-7650325)
chr3 (265-417)||(35315904-35316057)
chr3 (270-417)||(33251610-33251758)
chr3 (268-417)||(7328792-7328941)
chr3 (268-417)||(26207810-26207960)
chr3 (268-417)||(29762164-29762314)
chr3 (268-417)||(51060290-51060440)
chr3 (268-368)||(3507542-3507643)
chr3 (270-366)||(41630523-41630620)
chr3 (268-368)||(47219141-47219242)
chr3 (265-401)||(52168576-52168713)
chr3 (268-368)||(55069688-55069789)
chr3 (297-417)||(42412813-42412933)
chr3 (265-368)||(47749111-47749214)
chr3 (270-417)||(48341968-48342116)
chr3 (271-368)||(8164550-8164648)
chr3 (268-417)||(35923632-35923782)
chr3 (268-329)||(49021212-49021274)
chr3 (270-411)||(49543473-49543615)
chr3 (268-359)||(26361976-26362068)
chr3 (268-359)||(31072884-31072976)
chr3 (305-417)||(49082772-49082884)
chr3 (268-417)||(3136703-3136852)
chr3 (275-348)||(7648757-7648831)
chr3 (311-417)||(11687162-11687268)
chr3 (268-357)||(19146969-19147059)
chr3 (268-365)||(26043812-26043910)
chr3 (305-366)||(10855383-10855444)
chr3 (268-368)||(15795503-15795603)
chr3 (268-356)||(54237457-54237546)
chr3 (303-367)||(26590311-26590375)
chr3 (265-359)||(4638160-4638255)
chr3 (268-370)||(23511562-23511665)
chr3 (281-357)||(3755578-3755655)
chr3 (268-368)||(8362574-8362675)
chr3 (272-368)||(52364813-52364910)
chr3 (268-368)||(53649724-53649825)
chr3 (297-417)||(41219541-41219660)
chr3 (265-360)||(45402357-45402453)
chr3 (275-357)||(928608-928691)
chr3 (318-417)||(37092565-37092664)
chr3 (268-333)||(33688983-33689049)
chr3 (276-329)||(43330749-43330803)
chr3 (319-368)||(7612987-7613036)
chr3 (268-360)||(24506657-24506749)
chr3 (297-342)||(34460549-34460594)
chr3 (271-390)||(24146340-24146460)
chr3 (265-360)||(34662325-34662421)
chr3 (311-367)||(45450500-45450555)
chr3 (277-360)||(47303507-47303591)
chr3 (312-367)||(28242276-28242331)
chr3 (297-360)||(39849077-39849139)
chr3 (268-366)||(40660336-40660435)
chr3 (268-322)||(50753350-50753405)
chr3 (312-366)||(20948115-20948169)
chr3 (269-357)||(2029277-2029366)
chr3 (315-368)||(5549293-5549346)
chr3 (320-360)||(50682482-50682522)
[»] scaffold0384 (1 HSPs)
scaffold0384 (265-417)||(5924-6076)
[»] scaffold0016 (1 HSPs)
scaffold0016 (270-375)||(8711-8817)
[»] scaffold0291 (1 HSPs)
scaffold0291 (268-368)||(6855-6956)
[»] scaffold0010 (2 HSPs)
scaffold0010 (272-357)||(155723-155809)
scaffold0010 (311-368)||(25836-25893)
[»] scaffold0009 (2 HSPs)
scaffold0009 (268-417)||(42840-42990)
scaffold0009 (325-368)||(9436-9479)
[»] scaffold0002 (3 HSPs)
scaffold0002 (268-408)||(319382-319523)
scaffold0002 (268-417)||(521-671)
scaffold0002 (324-417)||(412091-412184)
[»] scaffold0006 (1 HSPs)
scaffold0006 (268-417)||(68468-68615)
[»] scaffold0376 (1 HSPs)
scaffold0376 (268-417)||(12621-12771)
[»] scaffold0316 (1 HSPs)
scaffold0316 (268-417)||(1622-1772)
[»] scaffold0116 (1 HSPs)
scaffold0116 (265-329)||(17429-17494)
[»] scaffold0005 (4 HSPs)
scaffold0005 (300-417)||(271115-271232)
scaffold0005 (271-335)||(250036-250101)
scaffold0005 (268-335)||(219402-219470)
scaffold0005 (297-390)||(249343-249436)
[»] scaffold0004 (2 HSPs)
scaffold0004 (271-416)||(94991-95136)
scaffold0004 (268-368)||(7843-7944)
[»] scaffold0050 (1 HSPs)
scaffold0050 (314-368)||(72632-72686)
[»] scaffold0011 (2 HSPs)
scaffold0011 (268-417)||(186469-186618)
scaffold0011 (268-417)||(224268-224418)
[»] scaffold0029 (1 HSPs)
scaffold0029 (268-360)||(41052-41145)
[»] scaffold0223 (1 HSPs)
scaffold0223 (265-368)||(16879-16983)
[»] scaffold0341 (1 HSPs)
scaffold0341 (297-360)||(18640-18703)
[»] scaffold0079 (1 HSPs)
scaffold0079 (310-368)||(8175-8232)
[»] scaffold0024 (1 HSPs)
scaffold0024 (268-357)||(149396-149486)
[»] scaffold0013 (1 HSPs)
scaffold0013 (318-360)||(51739-51781)
[»] scaffold0155 (1 HSPs)
scaffold0155 (268-347)||(19276-19356)
[»] scaffold0001 (1 HSPs)
scaffold0001 (297-345)||(65190-65238)


Alignment Details
Target: scaffold0086 (Bit Score: 198; Significance: 1e-108; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 15 - 240
Target Start/End: Complemental strand, 26528 - 26303
Alignment:
Q  15 gacagtgattaattcagacaaaatgtttggcagaattgccttaaattgcatatgccaagtggtccatgtgtgtgacaaaatgtgtaaaataataaaccaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||    
T  26528 gacagtgattaattcagacaaaatgtttggcagaattgccttaaattgcatatgccaagtggtccatctctctgacaaaatgtgtaaaataataaaccaa 26429  T
Q  115 tgaagcagccatgtgcccttgctcttaataagggaaaaacatgtgatgtgagattctgtgtagtcaaatacttaatgagacttgagtggaggaaaaaaca 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26428 tgaagcagccatgtgcccttgctcttaataagggaaaaacatgtgatgtgagattctgtgtagtcaaatactaaatgagacttgagtggaggaaaaaaca 26329  T
Q  215 aaagtaatataagattttggagacta 240  Q
    ||||||||||||   |||||||||||    
T  26328 aaagtaatataaagatttggagacta 26303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 269 - 417
Target Start/End: Complemental strand, 26283 - 26134
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    |||||||||| || |||| ||||||||| ||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  26283 ggtttccgactcatcaattgtggacgactaatccggctcgtgcgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaacccagtattc 26184  T
Q  368 ctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    | ||| ||||| |||||||||||||| |||||||||||| ||||||||||    
T  26183 cccaggtatgtccttagaaggagtttcttgccactagagtccaagcaact 26134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 9e-37; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 48804784 - 48804634
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||  |||||||||| ||| |||||||||| |||||    
T  48804784 cggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccttgggaatcgaacccggtatt 48804685  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||| || ||| ||||||| |  |||||||| ||||||||||||||    
T  48804684 ccccggatacgtccttggaaggagctccttgccactggagcccaagcaact 48804634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 265 - 417
Target Start/End: Original strand, 17748387 - 17748540
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||  ||||||||||||||||||||||| ||||||||||||||| |||||||||| ||    
T  17748387 catcggtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggt 17748486  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||| |  ||| || ||| |||| || |  ||||||||||||||||| |||||    
T  17748487 attccccgaatacgtccttggaagaagctgcttgccactagagcccaaacaact 17748540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 265 - 417
Target Start/End: Original strand, 4195207 - 4195360
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||||| |||||||||||||||||| | |||||||||| || ||||||||||||||||| |||||| |||||||| |||||||||||||| | ||    
T  4195207 catcggtttccaacccaccaatggtggacggctaatccggctcatgcgtagaggcatgcgcactagccaaatgttgttcctcctggaaatcgaactcggt 4195306  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||| | |||| || ||| | ||||| |  |||||||| ||||||||||||||    
T  4195307 attccccggatacgtccttggcaggagctccttgccactggagcccaagcaact 4195360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 265 - 417
Target Start/End: Complemental strand, 29152044 - 29151891
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||||||||||| ||||||| |||||  ||||||| ||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||| ||    
T  29152044 catcggtttccgacccatcaatggtagacgattaatccggatcgtgtgtagaggcatgcgcactggtcaaacgttgttcttcctgggaatcgaacccggt 29151945  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||||||| || || | |  |||||  | |||| ||||||||||||| |||||    
T  29151944 attcctcaggtacgtccatgaaaggaactcattgtcactagagcccaaacaact 29151891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 268 - 390
Target Start/End: Complemental strand, 37515022 - 37514899
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||| ||||||| ||||  ||||||||||||| |||||| ||||||||||| ||||||||||||||| ||| |||||||||||||||||    
T  37515022 cggtttccgacccactaatggtgaacgattaatccggctcgtgcgtagagacatgcgcactgaccaaacgttgttcccactgaaaatcgaacccagtatt 37514923  T
Q  367 cctcagatatgttcttagaaggag 390  Q
    || | | ||||| ||| |||||||    
T  37514922 ccccgggtatgtccttggaaggag 37514899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 271 - 417
Target Start/End: Complemental strand, 47341974 - 47341827
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcct 369  Q
    |||||||||||||||||||| ||||| ||||| ||||||| |||||||||||||||||||||||  |||||||||||||| |||||||| | |||||||     
T  47341974 tttccgacccaccaatggtgaacgaccaatcctgctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaactcggtattccc 47341875  T
Q  370 cagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    | | || || ||| ||| ||| |  |||||||| ||||||||||||||    
T  47341874 cgggtacgtccttggaatgagctccttgccactggagcccaagcaact 47341827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 417
Target Start/End: Complemental strand, 1797529 - 1797411
Alignment:
Q  299 tccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgc 398  Q
    ||||||||||| |||||| |||||||||||||||| ||||||| ||||||| |||||||||| ||||||||| |||| || ||| ||||||| |  ||||    
T  1797529 tccggctcgtgcgtagagacatgcgcactggccaagcgttgtttcccctgggaatcgaacccggtattcctcggatacgtccttggaaggagctccttgc 1797430  T
Q  399 cactagagcccaagcaact 417  Q
    |||| ||||||||||||||    
T  1797429 cactggagcccaagcaact 1797411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 10047884 - 10048034
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||||||||||||||||| ||| | |||| || |||||||| ||||||||||||||  |||||||||||||| |||||||||| |||||    
T  10047884 cggtttccgacccaccaatggtggacgactaattctgctcatgcgtagaggcctgcgcactggccaagtgttgttccccctgggaatcgaacccggtatt 10047983  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||| || ||| ||||||| |  |||||||| |||  |||||||||    
T  10047984 ccccggatacgtccttggaaggagctccttgccactggagttcaagcaact 10048034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 23658279 - 23658189
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaac 358  Q
    |||||| |||||||||| | |||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  23658279 ggtttctgacccaccaaagatggacgactaatccggctcgtgtgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaac 23658189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 43861980 - 43862130
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| ||| ||||||| |||| | ||| |||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  43861980 cggttttcgatccaccaaaggtgaatgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgggaatcgaacccggtatt 43862079  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || |||||| ||  || ||| ||| |  ||||| ||||||||||| |||||    
T  43862080 ccccagatacgtctttggaaagagctccttgccgctagagcccaaacaact 43862130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 268 - 360
Target Start/End: Original strand, 38578875 - 38578968
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||||||||||||||||| ||||| |||| |||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  38578875 cggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaaccc 38578968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 276 - 411
Target Start/End: Original strand, 36619270 - 36619406
Alignment:
Q  276 gacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagat 374  Q
    ||||||||||||||||||||| |||||||||| || |||||||||||| |||||| |||  |||||||||||||| |||||||||| ||||||| || ||    
T  36619270 gacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacactggacaagtgttgttccccctgggaatcgaacccggtattccccaaat 36619369  T
Q  375 atgttcttagaaggagtttattgccactagagcccaa 411  Q
    | || |||  ||||||||  |||||||||||| ||||    
T  36619370 acgtccttgcaaggagttccttgccactagagtccaa 36619406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 26423296 - 26423445
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||| ||||| |||| ||||| |||| |||||||| ||||||||| | ||||||||||| ||||||| ||||||| |||||||||| |||||    
T  26423296 cggtttccgacc-accaaaggtgaacgactaatctggctcgtgcgtagaggcaggtgcactggccaagcgttgtttcccctgggaatcgaacccggtatt 26423394  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |||  | || || ||| |||||||||| |||||||| |||||||| |||||    
T  26423395 ccttgggtacgtccttggaaggagtttcttgccactggagcccaaacaact 26423445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 265 - 417
Target Start/End: Original strand, 5069820 - 5069973
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||||||||||||||| ||||| |||| ||||||||| ||| |||||||||||| |||| || || ||||||||| |||||||||||||||| ||    
T  5069820 catcggtttccgacccaccaaaggtgggcgactaatccggcttgtgcgtagaggcatgcacactagctaagcgttgttcctcctggaaatcgaacccggt 5069919  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||| | | | || || |||||||| || |  |||||||| |||||||| |||||    
T  5069920 atttcccgggtacgtccttagaagaagctccttgccactggagcccaaacaact 5069973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 265 - 417
Target Start/End: Original strand, 42210267 - 42210420
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||||||||||||||| |||||  ||  ||||||||||||| |||||||||||||||||||||||||||||||  | |||| ||||||| || ||    
T  42210267 catcggtttccgacccaccaacggtgggtgattaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttttcactgggaatcgaagccggt 42210366  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||||| |||| || ||| ||| ||| |  |||||||| ||| | ||||||||    
T  42210367 attcctcggatacgtccttggaaagagctccttgccactggagtctaagcaact 42210420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 359
Target Start/End: Complemental strand, 27028380 - 27028288
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacc 359  Q
    |||||||||||||||||| ||||  |||| ||||| |||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  27028380 cggtttccgacccaccaaaggtgagcgactaatccagctcatgtgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaacc 27028288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 13095959 - 13095809
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| ||||  |||| |||||||||| || |||||||||||||||||||||||  |||||||||||||| ||| |||||| |||||    
T  13095959 cggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatagaacccggtatt 13095860  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | || || |||  |||||| |  |||||||  ||||||||||||||    
T  13095859 ccccgggtacgtccttgaaaggagctccttgccacgggagcccaagcaact 13095809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 18785770 - 18785620
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||  |||| ||||| ||||| | || || |||||||||||||||||||||||  |||||||||||| | |||||||||| |||||    
T  18785770 cggtttccgacccaccagaggtgaacgactaatccagttcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtatt 18785671  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | || || ||| ||||||| || |||||||| ||||||| ||||||    
T  18785670 ccccgggtacgtccttggaaggagcttcttgccactggagcccatgcaact 18785620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 21530849 - 21530699
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| ||||  |||  ||| ||||||||| ||||||||||| |||||| ||||  |||||||||||||| |||| |||||||||||    
T  21530849 cggtttccgacccaccaaaggtgagcgattaattcggctcgtgcgtagaggcatgtgcactgaccaagtgttgttccccctgggaatcaaacccagtatt 21530750  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || ||| || || ||| ||||||| |  |||||||| ||||| ||||||||    
T  21530749 ccccaggtacgtccttggaaggagctccttgccactggagccgaagcaact 21530699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 34659327 - 34659226
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| |||| |||||||||||| |||| ||||||||||||| ||||||||||||||||||| ||| ||||||||||| ||  |||||||||| |||||    
T  34659327 cggttttcgacacaccaatggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgttccccttgagaatcgaacccggtatt 34659228  T
Q  367 cc 368  Q
    ||    
T  34659227 cc 34659226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 270 - 417
Target Start/End: Complemental strand, 16802222 - 16802074
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||| ||||||||||||||||  |||| ||||||||||||| |||||||||| |||||||||||| ||||||||| |||   ||||||| || |||||||    
T  16802222 gttttcgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatacgcactggccaatcgttgttcctcctaagaatcgaatccggtattcc 16802123  T
Q  369 tcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     | | || || ||| ||||||| | ||||||||| ||||||| ||||||    
T  16802122 ccgggtacgtccttggaaggagctcattgccactggagcccaggcaact 16802074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 45448071 - 45447921
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||| || |||||  ||| |||| | || ||||||||||| ||||||||| ||||| |||||||| ||||||||||||||||  |||||    
T  45448071 cggtttccgacccactaaaggtgggtgactaatctgactagtgtgtagagggatgcgcactagccaagcgttgttctccctggaaatcgaacctggtatt 45447972  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     ||| | || || ||| ||||||| |  ||||||||||| |||||||||||    
T  45447971 tctcgggtacgtccttggaaggagctccttgccactagaacccaagcaact 45447921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 275 - 417
Target Start/End: Original strand, 4228769 - 4228909
Alignment:
Q  275 cgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcaga 373  Q
    ||||||| ||||||||| |||| |||||||||| || |||| |||||| |||||||||||||||||||   |||||||||||||||  ||||||||| ||    
T  4228769 cgacccatcaatggtgggcgactaatccggctcatgcgtaggggcatgtgcactggccaaacgttgtt---cctggaaatcgaacctggtattcctcgga 4228865  T
Q  374 tatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || || ||| ||||||| |  ||||| || |||||||| |||||    
T  4228866 tacgtccttggaaggagctccttgccgctggagcccaaacaact 4228909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 22974068 - 22973967
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||| |||||||||| |||||||||| |||| ||||| || ||||| |||||| |||||||||| ||||||||||||||  |||||||||| |||||    
T  22974068 cggtttctgacccaccaaaggtggacgactaatctggctcatgcgtagacgcatgcacactggccaagcgttgttccccctgagaatcgaacccggtatt 22973969  T
Q  367 cc 368  Q
    ||    
T  22973968 cc 22973967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 417
Target Start/End: Complemental strand, 42032200 - 42032047
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||||||||||| ||| ||||||| || ||| |||||| || ||||| | ||| ||||||||||||||||||||||| ||| |||||||||  ||    
T  42032200 catcggtttccgacccatcaaaggtggacaactaattcggctcatgcgtagatgtatgtgcactggccaaacgttgttccccgtgggaatcgaaccaggt 42032101  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||| | | || || ||| ||||||| || |||| ||| |||||||| |||||    
T  42032100 attccccgggtacgtccttggaaggagcttcttgctactggagcccaaacaact 42032047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 268 - 359
Target Start/End: Complemental strand, 1606042 - 1605950
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacc 359  Q
    |||||||||| ||||||| ||||| |||| ||||||||||  |  |||||||||| ||||||||||| |||||||||||||||||||||||||    
T  1606042 cggtttccgatccaccaaaggtgggcgactaatccggctcaagcctagaggcatgtgcactggccaagcgttgttccccctggaaatcgaacc 1605950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 297 - 417
Target Start/End: Complemental strand, 43925583 - 43925463
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttatt 396  Q
    ||||| |||| || |||||||||||||||||| ||||  |||||||||||||| |||||||||| ||||||| | | || || ||| ||||||| |  ||    
T  43925583 aatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctcctt 43925484  T
Q  397 gccactagagcccaagcaact 417  Q
    |||||| ||||||||||||||    
T  43925483 gccactggagcccaagcaact 43925463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 268 - 390
Target Start/End: Original strand, 8734694 - 8734817
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| ||||| |||| |||| |||||||| || ||||||||||||||| |||| | ||||||||||  |||||||||||   ||||    
T  8734694 cggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcactgcccaagcattgttcccccaagaaatcgaacctgatatt 8734793  T
Q  367 cctcagatatgttcttagaaggag 390  Q
    ||  |||||||| ||| |||||||    
T  8734794 cccgagatatgtccttggaaggag 8734817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 22993375 - 22993525
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||| |||||||||| ||||  |||| ||||||| ||||| |||||||||||| |||||||||| ||||||||| ||| | ||||||||||  ||||    
T  22993375 cggtttctgacccaccaaaggtgagcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaacccgatatt 22993474  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | || || ||| ||||||| |  |||||||| ||| ||||||||||    
T  22993475 ccccgggtacgtccttggaaggagctccttgccactggagtccaagcaact 22993525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 27875096 - 27875245
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| |||||||| || |||||||||| ||| || ||| || ||||||||||| |||||||||||  ||| |||||||||| ||||||| || |||||    
T  27875096 cggttttcgacccactaaaggtggacgactaatgcgactcatgcgtagaggcatgtgcactggccaagtgttattccccctgggaatcgaatccggtatt 27875195  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || |||||| | |||| ||||||| |  |||||||| |||||||| |||||    
T  27875196 ccccagatacg-tcttggaaggagctacttgccactggagcccaaacaact 27875245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 347
Target Start/End: Complemental strand, 28744261 - 28744183
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccct 347  Q
    |||||||||||||||| |||||||||| |||||||||||| |||||||| ||||| ||||||||| | |||||||||||    
T  28744261 gtttccgacccaccaaaggtggacgactaatccggctcgtatgtagaggtatgcgtactggccaagcattgttccccct 28744183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 344
Target Start/End: Complemental strand, 41945571 - 41945497
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccc 344  Q
    |||||||| |||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| |||| |||||    
T  41945571 tttccgactcaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttattccc 41945497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 265 - 417
Target Start/End: Complemental strand, 365244 - 365091
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||| |||||||||| ||||||   || |||| ||||| || ||||||||||||||||||   || ||||||||| ||||  |||||||||| ||    
T  365244 catcggttttcgacccaccactggtgggtcactaatcaggctcatgcgtagaggcatgcgcactgattaagcgttgttcctcctgtgaatcgaacccggt 365145  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||||| |||| ||| || ||||||| |  || ||||||||||||||| ||||    
T  365144 attcctcggatacgtttttggaaggagctctttaccactagagcccaaggaact 365091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 417
Target Start/End: Original strand, 19914741 - 19914860
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttatt 396  Q
    |||| ||||| || ||||||||||||||| ||||||| |||||||||   ||| ||||||||||||||||||| || || || ||| ||||||| |  ||    
T  19914741 aatctggctcatgcgtagaggcatgcgcattggccaagcgttgttcctt-tgggaatcgaacccagtattccttaggtacgtccttggaaggagctcctt 19914839  T
Q  397 gccactagagcccaagcaact 417  Q
    |||||| ||||||||||||||    
T  19914840 gccactggagcccaagcaact 19914860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 368
Target Start/End: Original strand, 49142707 - 49142778
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||||||||||| ||||||||||| |||||||| || ||||||||||||| | |||||||||| |||||||    
T  49142707 aatccggctcgtgcgtagaggcatgtgcactggctaagcgttgttccccctaggaatcgaacccggtattcc 49142778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 341
Target Start/End: Complemental strand, 3353525 - 3353451
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgtt 341  Q
    ||||||| || ||| ||| |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  3353525 cggtttctgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaaatgttgtt 3353451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 365
Target Start/End: Complemental strand, 39475040 - 39474943
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtat 365  Q
    ||||| |||||||| || |||||||||| |||||||||| || ||||||| |||||||||| |||| ||||||||||| | | |||||||||| ||||    
T  39475040 ggttttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactgaccaagcgttgttccccataggaatcgaacccggtat 39474943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 417
Target Start/End: Original strand, 43346788 - 43346937
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    ||||||||||||||||| | ||  |||| ||||||||||||  |||||||||||||||| ||||||  |||||||||| ||  ||| |||||| ||||||    
T  43346788 ggtttccgacccaccaaagatgagcgactaatccggctcgtacgtagaggcatgcgcaccggccaagtgttgttccccttgagaattgaacccggtattc 43346887  T
Q  368 ctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    | |||||| ||  || ||||||| |  |||||||| ||| |||| |||||    
T  43346888 cccagatacgtctttggaaggagctccttgccactggagtccaaacaact 43346937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 24983423 - 24983487
Alignment:
Q  265 catcggtttcc-gacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcact 327  Q
    ||||||||||| ||||||||||||||||||||| |||||||||| || |||||||||||||||||    
T  24983423 catcggtttccagacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcact 24983487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 359
Target Start/End: Original strand, 4705989 - 4706084
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacc 359  Q
    ||||||||| ||| | ||||| |||||||||| ||||| ||||||| ||||| ||||||| | |||| ||||||||||||||||  ||||||||||    
T  4705989 catcggttttcgatctaccaaaggtggacgactaatccagctcgtgcgtagaagcatgcgtaatggctaaacgttgttccccctaaaaatcgaacc 4706084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 368
Target Start/End: Complemental strand, 14535390 - 14535291
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||| |||||| ||||||||| |||| ||||| ||||||| |||||||||||| ||||||||||  ||||||| ||||| ||||  ||||| |||||||    
T  14535390 gtttctgacccatcaatggtgggcgactaatccagctcgtgcgtagaggcatgcacactggccaagtgttgttctccctgaaaatgaaacccggtattcc 14535291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 390
Target Start/End: Original strand, 21190788 - 21190911
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| |||||||||| || ||| |||| |||| | |||||| ||||||||||||||||| ||||| ||||| ||| ||| | |||||||||| |||||    
T  21190788 cggttttcgacccaccattgatgggcgactaatctgactcgtgcgtagaggcatgcgcactagccaagcgttgctcctcctaggaatcgaacccggtatt 21190887  T
Q  367 cctcagatatgttcttagaaggag 390  Q
    || | |||| || ||| |||||||    
T  21190888 ccccggataagtccttggaaggag 21190911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 417
Target Start/End: Original strand, 22268088 - 22268187
Alignment:
Q  318 catgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||||||||||||||| |||||||||||||| |||||||||| ||||||| ||  || || ||| ||| ||| |  |||||||| |||||||| |||||    
T  22268088 catgcgcactggccaaatgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaatgagctccttgccactggagcccaaacaact 22268187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 368
Target Start/End: Complemental strand, 30827363 - 30827292
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||||||||||| ||||||||||||| |||||||||  ||||||| ||||| ||||||||||  |||||||    
T  30827363 aatccggctcgtgcgtagaggcatgcgtactggccaagtgttgttctccctgaaaatcgaacctggtattcc 30827292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 39420938 - 39420789
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||| |||| ||| ||| |||||| |||||||||| || ||||||||| ||||||||||||| ||||||||||  ||| | ||||| || |||||    
T  39420938 cggtttccggcccatcaaaggtagacgactaatccggctcatgcgtagaggcacgcgcactggccaagcgttgttccctttgggattcgaa-ccggtatt 39420840  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | ||  | |||  |||||| |  |||||||||||||||||||||||    
T  39420839 ccccgggtacctccttgaaaggagctccttgccactagagcccaagcaact 39420789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 368
Target Start/End: Complemental strand, 3603455 - 3603353
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcact----ggccaaacgttgttccccctggaaatcgaacccagtat 365  Q
    |||||||||||||||  ||| ||||  ||||||||||||| |||||||||||||||||    |||||||||||||||||||    |||||||||| ||||    
T  3603455 tttccgacccaccaaaagtgaacgattaatccggctcgtgcgtagaggcatgcgcactgaccggccaaacgttgttcccccaaagaatcgaacccggtat 3603356  T
Q  366 tcc 368  Q
    |||    
T  3603355 tcc 3603353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 348
Target Start/End: Original strand, 28396168 - 28396249
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctg 348  Q
    |||||||||||||||||| ||| |||||| |||||||||| || ||| ||||||||||||  || || ||||||||||||||    
T  28396168 cggtttccgacccaccaaaggtagacgactaatccggctcatgcgtaaaggcatgcgcaccagctaagcgttgttccccctg 28396249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 358
Target Start/End: Complemental strand, 32823342 - 32823253
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaac 358  Q
    |||||||||||| |||||||   |||| ||||||||||||| |||||||||| | ||| ||||||  |||||||||||||| ||||||||    
T  32823342 gtttccgacccatcaatggtctgcgactaatccggctcgtgcgtagaggcatacacaccggccaagtgttgttccccctgggaatcgaac 32823253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 347
Target Start/End: Complemental strand, 48551958 - 48551878
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccct 347  Q
    |||||||||| ||| ||| |||||||||| |||||||||| |  ||||||||||||||| ||||||| |||||||| ||||    
T  48551958 cggtttccgatccatcaaaggtggacgactaatccggctcatacgtagaggcatgcgcattggccaaccgttgttcaccct 48551878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 22573913 - 22573764
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| | ||||| ||||| |||||||  |||||||||| || ||| ||||||||||||||| |||| |||||| |||||| |||||||||||  ||||    
T  22573913 cggttttcaacccatcaatgatggacgattaatccggctcatgcgtaaaggcatgcgcactggtcaaatgttgtt-cccctgaaaatcgaacccgatatt 22573815  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || |  |||| |  || |||| || || |||| ||| ||||||||||||||    
T  22573814 cccccaatatatctttggaagaagcttcttgctactggagcccaagcaact 22573764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 386
Target Start/End: Complemental strand, 9814028 - 9813958
Alignment:
Q  315 aggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaa 386  Q
    |||||||| ||||||||| |||||||||| | ||| |||||||||||||||||| || ||| | ||||||||    
T  9814028 aggcatgcacactggccatacgttgttccac-tgggaatcgaacccagtattccccaaatacgatcttagaa 9813958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 14650418 - 14650268
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| | ||||||||| ||||  |||| || ||||||| || ||||||||||  ||||||| ||| | ||||||| ||||||||||||||||  ||||    
T  14650418 cggttttcaacccaccaaaggtgagcgactaacccggctcatgcgtagaggcatatgcactggtcaagcattgttcctcctggaaatcgaacccgatatt 14650319  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |  | | || || ||| ||||||| |  |||||||||||| |||| |||||    
T  14650318 ctccgggtacgtccttggaaggagctccttgccactagagtccaaacaact 14650268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 358
Target Start/End: Complemental strand, 44336957 - 44336903
Alignment:
Q  304 ctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaac 358  Q
    |||||| |||||||||||||||||| ||||||||| ||   ||||||||||||||    
T  44336957 ctcgtgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaac 44336903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 45697199 - 45697276
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttcccc 345  Q
    ||||||||||||||||| |||||||||| || ||  ||| || ||||||||||||||||||  |||  ||||||||||    
T  45697199 ggtttccgacccaccaaaggtggacgactaacccaactcatgcgtagaggcatgcgcactgatcaagtgttgttcccc 45697276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 366
Target Start/End: Original strand, 24969378 - 24969431
Alignment:
Q  311 gtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||| |||||||||||||  ||||||  ||||||||||||||||| |||||    
T  24969378 gtagaggcacgcgcactggccaagtgttgtt--ccctggaaatcgaacccggtatt 24969431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 9e-37; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 14124119 - 14123969
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||| ||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  |||||    
T  14124119 cggtttccaacccaccaatggtgagcgactaatccggctcgtgtgtagaggcatgcgcactggccaaatgttgttccccctgggaatcgaacctggtatt 14124020  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |||||  || |||||| ||||||| || |||||| | |||||||| |||||    
T  14124019 cctcaagtacgttcttggaaggagcttcttgccattggagcccaaacaact 14123969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 29895890 - 29895740
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||| |||||||||||||||||| |||||||||| || |||||||||||||||||||||||  |||||||||||||| |||||||||| |||||    
T  29895890 cggtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtatt 29895791  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||| || ||| ||||||| |  |||||||| ||||||||||||||    
T  29895790 ccccggatacgtccttggaaggagctccttgccactggagcccaagcaact 29895740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 265 - 417
Target Start/End: Complemental strand, 52950188 - 52950035
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||||||||||||||| |||||||||| |||| || || ||||||||| |||||||||||||||| ||||||||||||||| ||||||||||  |    
T  52950188 catcggtttccgacccaccaaaggtggacgactaatctggttcatgtgtagagtcatgcgcactggccaagcgttgttccccctgggaatcgaacccgat 52950089  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||| ||| || || ||| ||||||| |  ||||||||||||||||| |||||    
T  52950088 attccccaggtacgtccttggaaggagctccttgccactagagcccaaacaact 52950035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 38166130 - 38165980
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| ||||| |||| ||||||||||||| |||||| |||||||||||||||| ||||||||||||||| |||| |||||||||||    
T  38166130 cggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgttccccctgggaatccaacccagtatt 38166031  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||| || ||| ||||||| |  |||||| | |||||||| |||||    
T  38166030 ccccggatacgtccttggaaggagctccttgccagtggagcccaaacaact 38165980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 269 - 417
Target Start/End: Complemental strand, 47078560 - 47078411
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    ||||||||||||||||||||||  |||| ||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| |||||||||| ||||||    
T  47078560 ggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaacccggtattc 47078461  T
Q  368 ctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    | | | || || ||| ||||||| |  |||||||| || |||||||||||    
T  47078460 cccgggtacgtccttggaaggagctccttgccactggaacccaagcaact 47078411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 2559410 - 2559260
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| |||||||||  ||||||||| ||| ||||||||||||||||||||||| ||||||||| ||| ||||||||| || |||||    
T  2559410 cggtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcactggccaagcgttgttcctcctagaaatcgaatccggtatt 2559311  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || ||| || || ||| ||||||| |  |||||||| |||||||| |||||    
T  2559310 ccccaggtacgtccttggaaggagctcgttgccactggagcccaaacaact 2559260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 8889125 - 8888975
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| |||||||||| |||||||||| || |||||| ||||||||||| ||||  |||||||||||| | |||||||||| |||||    
T  8889125 cggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagagccatgcgcactgcccaagtgttgttccccctaggaatcgaacccggtatt 8889026  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||| || ||||||||||| |  ||||| ||||||||||| |||||    
T  8889025 ccccggatacgtccttagaaggagctccttgccgctagagcccaaacaact 8888975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 43458716 - 43458566
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||| || ||| |||||||||| ||||||||||||  ||||||||||||||||||||||| |||| |||| ||||| ||||||| ||||||||    
T  43458716 cggtttccgactcatcaaaggtggacgactaatccggctcgtccgtagaggcatgcgcactggccaagcgttcttcctcctgggaatcgaatccagtatt 43458617  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || || ||| || ||| ||| ||| || |||||||| ||||||||||||||    
T  43458616 ccccaaatacgtccttggaatgagcttcttgccactggagcccaagcaact 43458566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 417
Target Start/End: Complemental strand, 1446911 - 1446779
Alignment:
Q  286 tggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttag 384  Q
    ||||||||||| |||||||||| || |||||||||||||||||||||||  |||||||||||||| |||||||||| ||||||| | |||| || ||| |    
T  1446911 tggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttgg 1446812  T
Q  385 aaggagtttattgccactagagcccaagcaact 417  Q
    |||||| |  |||||||| ||||||||||||||    
T  1446811 aaggagctccttgccactggagcccaagcaact 1446779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 268 - 367
Target Start/End: Original strand, 3159477 - 3159577
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||||||||  |||| |||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||    
T  3159477 cggtttccgacccaccaatggtgagcgactaatctggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaagtcgaacccggtatt 3159576  T
Q  367 c 367  Q
    |    
T  3159577 c 3159577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 268 - 368
Target Start/End: Original strand, 7246654 - 7246755
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| ||||| |||| |||||||||| || ||||||||||||||||||||||| |||||||||| || | ||||||||||||||||    
T  7246654 cggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcccactaggaatcgaacccagtatt 7246753  T
Q  367 cc 368  Q
    ||    
T  7246754 cc 7246755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 389
Target Start/End: Complemental strand, 20128412 - 20128290
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||| ||||||||||||||||||||| ||||  ||||||| ||| ||||||||||||||||||| | ||||||||||||  ||||||||||||||||    
T  20128412 cggtttctgacccaccaatggtggacgactaatctagctcgtgcgtaaaggcatgcgcactggccaagcattgttccccctgagaatcgaacccagtatt 20128313  T
Q  367 cctcagatatgttcttagaagga 389  Q
    || | |||| || ||| ||||||    
T  20128312 ccccggatacgtccttggaagga 20128290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 21429404 - 21429254
Alignment:
Q  268 cggtttccgacccaccaatggtggacgacaa-tccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| |||||||||| | || | |||||| |||||||||||||||||||| ||||||||||||||||  |||||||||||  ||||    
T  21429404 cggtttccgacccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcactggctaaacgttgttccccctaaaaatcgaacccgatatt 21429305  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |||| |||| ||  || ||||||| || || | |||||||| |||| ||||    
T  21429304 cctcggatacgtctttggaaggagctttttacaactagagctcaagtaact 21429254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 33647824 - 33647674
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||| ||||||| | || ||||| |||| || ||||| ||||||| ||| ||||||| ||| |||||||| ||||||||||||||||| |||||    
T  33647824 cggtttccgatccaccaaagatgaacgactaatctggttcgtgcgtagaggaatgtgcactggtcaagcgttgttctccctggaaatcgaacccggtatt 33647725  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || |||||| || |||  |||||| |  |||||||||||||||||||||||    
T  33647724 ccccagatacgtccttgaaaggagctccttgccactagagcccaagcaact 33647674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 269 - 417
Target Start/End: Complemental strand, 20421875 - 20421727
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    ||||||||||||| ||||| |||||||  |||| ||||| || |||||||||||||||||||||||  |||||||||||||||||||||| |||||||||    
T  20421875 ggtttccgacccatcaatgatggacgattaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaa-ccagtattc 20421777  T
Q  368 ctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    | |||||| ||  ||  |||||| |  ||||||||  |||||||||||||    
T  20421776 cccagatacgtctttgaaaggagctccttgccactgaagcccaagcaact 20421727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 367
Target Start/End: Complemental strand, 16450403 - 16450303
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||| ||||| |||||||||| |||| ||||| || ||||||||||| ||||||||||| ||||||||||||||| ||||||||||| ||||    
T  16450403 cggtttccgacctaccaaaggtggacgactaatctggctcatgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaacccaatatt 16450304  T
Q  367 c 367  Q
    |    
T  16450303 c 16450303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 269 - 360
Target Start/End: Original strand, 40272340 - 40272432
Alignment:
Q  269 ggtttccgacccaccaatggtggacgacaa-tccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||||||||||||||||||||| ||||||| |||| ||  || ||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  40272340 ggtttccgacccaccaatggtgaacgacaaatccgacttatgcgtagaggcatgcgcactggccaagcgttgttccccatggaaatcgaaccc 40272432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 284 - 417
Target Start/End: Original strand, 8064822 - 8064955
Alignment:
Q  284 aatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttctt 382  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||| |||  ||| |||||| ||| |||||||||||||||| ||||| || ||||||    
T  8064822 aatggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagtgttattccccttgggaatcgaacccagtatt-ctcaggtacgttctt 8064920  T
Q  383 agaaggagtttattgccactagagcccaagcaact 417  Q
    |||||||| |  |||| ||||||||| || |||||    
T  8064921 agaaggagctctttgctactagagcctaaacaact 8064955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 13073641 - 13073491
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| |||  ||||| |||| || || || ||||||| ||||||||||||||||| ||||||||| ||| |||||||| | |||||    
T  13073641 cggtttccgacccaccaaaggtaaacgactaatctggttcatgcgtagaggtatgcgcactggccaaacattgttccccatgggaatcgaactcggtatt 13073542  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |  ||| || || ||| ||||||| | |||||||||||||||||| |||||    
T  13073541 ctccaggtacgtccttggaaggagctcattgccactagagcccaaacaact 13073491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 24166553 - 24166403
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||| ||| ||| |||||  ||| |||| |||||||| ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||    
T  24166553 cggtttccgatccatcaaaggtgggtgactaatctggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcccttgggaatcgaacccagtatt 24166454  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || |   || || ||| ||||||| |  |||||||| |||||||| |||||    
T  24166453 ccccgagtacgtccttggaaggagctccttgccactggagcccaatcaact 24166403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 265 - 366
Target Start/End: Complemental strand, 29588842 - 29588740
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||| ||||||||||||||||||||||  || ||||||||||||| ||||||||||||||||| ||||| | ||||| ||||||| |||||||||| ||    
T  29588842 catcgatttccgacccaccaatggtggataactaatccggctcgtgcgtagaggcatgcgcactagccaagctttgtttcccctgggaatcgaacccggt 29588743  T
Q  364 att 366  Q
    |||    
T  29588742 att 29588740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 271 - 368
Target Start/End: Original strand, 49260676 - 49260774
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| ||| |||  |||||||||    
T  49260676 tttccgacccaccaaaggtggtcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccttgggaattgaattcagtattcc 49260774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 53599163 - 53599013
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||| |||| || |||| ||||  |||||||||| || ||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||    
T  53599163 cggtttccgatccactaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttcctcctgggaatcgaacccggtatt 53599064  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | || || ||| ||||||| |  |||||| | |||||||| |||||    
T  53599063 ccccgggtacgtccttggaaggagctccttgccaatggagcccaaacaact 53599013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 360
Target Start/End: Original strand, 40780869 - 40780962
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||||||||||||||||| |||||||||| |||||||||| || |||||||||||||||||| |||| ||||||||||| ||  ||||||||||    
T  40780869 cggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgttccccttgagaatcgaaccc 40780962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 411
Target Start/End: Original strand, 295541 - 295684
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||  ||||||||| |||||||||| |||| || ||||| ||||||||||||||||||||||||||||||| || |||| ||||||| |  |||||    
T  295541 cggtttcaaacccaccaacggtggacgactaatctggttcgtgcgtagaggcatgcgcactggccaaacgttgtt-cctctgggaatcgaatctggtatt 295639  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaa 411  Q
    || | |||| || ||||||||| |||  |||||||| ||||||||    
T  295640 ccccggatacgtccttagaaggtgttccttgccactggagcccaa 295684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 1940785 - 1940932
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| ||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||   |||| ||||||||||||||| ||||||||||  ||||    
T  1940785 cggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaacccgatatt 1940881  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     | | | || || ||| ||||||| |  ||||||||||||||||| |||||    
T  1940882 tcccgggtacgtccttggaaggagctccttgccactagagcccaaacaact 1940932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 367
Target Start/End: Complemental strand, 38075539 - 38075436
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||||||||||||||| ||||||| |  ||| |||||| || ||||||||||||||||||||||| ||||||| ||||||  |||||||||| ||    
T  38075539 catcggtttccgacccaccaaaggtggacaattaattcggctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcgaacccggt 38075440  T
Q  364 attc 367  Q
    ||||    
T  38075439 attc 38075436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 389
Target Start/End: Complemental strand, 43468450 - 43468328
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||| |||||||||||| |||||| |||| |||||||||| || ||||||  ||| ||||||||||| ||||||||||||||| |||||||||| |||||    
T  43468450 cggtctccgacccaccactggtgggcgactaatccggctcatgcgtagagaaatgtgcactggccaagcgttgttccccctgggaatcgaacccggtatt 43468351  T
Q  367 cctcagatatgttcttagaagga 389  Q
    || | | || |||||| ||||||    
T  43468350 ccccgggtacgttcttggaagga 43468328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 55921137 - 55920987
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| ||||  |||  |||||||||| |  |||||||||||||||||| ||||  |||||||||||||| |||||||||| |||||    
T  55921137 cggtttccgacccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtatt 55921038  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | |  || ||| ||||||| |  |||||||| ||||||||||||||    
T  55921037 ccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaact 55920987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 417
Target Start/End: Complemental strand, 6779317 - 6779164
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    |||||| ||||||  |||||| |||||||||| |||||||||| ||  |||||||||||||||||||||   |||||||||||||| |||||||||| ||    
T  6779317 catcgggttccgattcaccaaaggtggacgactaatccggctcatgcatagaggcatgcgcactggccaggtgttgttccccctgggaatcgaacccggt 6779218  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||  ||| || || ||| |||| || |  |||||||| |||||||| |||||    
T  6779217 attctccaggtacgtccttggaagaagctccttgccactggagcccaaacaact 6779164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 367
Target Start/End: Original strand, 20532420 - 20532517
Alignment:
Q  271 tttccgacccaccaatggtggacgaca-atccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    ||||||| ||||||| ||||| ||||  ||||||||| || ||||||||||||||||||||||| ||||||||| |||||||||||||| | ||||||    
T  20532420 tttccgatccaccaaaggtgggcgacttatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaactcggtattc 20532517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 368
Target Start/End: Original strand, 36145223 - 36145324
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||  || ||| |||||||||| |||||||||| |||||||||||||||||||||  ||| ||||||| ||||||| |||||||||| |||||    
T  36145223 cggtttccgattcatcaaaggtggacgactaatccggctcatgtgtagaggcatgcgcactgatcaagcgttgtttcccctgggaatcgaacccggtatt 36145322  T
Q  367 cc 368  Q
    ||    
T  36145323 cc 36145324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 297 - 370
Target Start/End: Original strand, 48015111 - 48015184
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctc 370  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||| |||| |||||||||| |||||||||    
T  48015111 aatccggctcgtgcgtagaggcttgcgcactggccaagcgttgttcccactgggaatcgaacccggtattcctc 48015184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 270 - 417
Target Start/End: Complemental strand, 3507371 - 3507224
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||||||| ||||||| ||||| ||||||| ||| ||| ||||||||||  |||||     
T  3507371 gtttccgatccaccaaaggtggacgactaatccggctcgtgtgtagaggcacgcgcactagccaagcgttgtt-cccttgggaatcgaacccgatattct 3507273  T
Q  369 tcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     | ||||  |||||  |||||| || ||   ||||||||||||||||||    
T  3507272 ccggatacattcttgaaaggagcttcttatgactagagcccaagcaact 3507224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 268 - 359
Target Start/End: Complemental strand, 4738721 - 4738629
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacc 359  Q
    |||||||||||||||||| |||||||||| ||| | |||| || |||||| ||||||||||||| || ||||||||| |||||||||||||||    
T  4738721 cggtttccgacccaccaaaggtggacgactaattcagctcatgcgtagagacatgcgcactggcaaagcgttgttcctcctggaaatcgaacc 4738629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 270 - 417
Target Start/End: Original strand, 5472858 - 5473006
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||| ||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||||||||| ||||||| ||||||  |||| ||||  |||||||    
T  5472858 gttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcaaacctggtattcc 5472957  T
Q  369 tcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     | |||| || |||  || ||| |  |||||||| |||||||| |||||    
T  5472958 ccggatacgtccttgaaatgagctccttgccactggagcccaaacaact 5473006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 265 - 359
Target Start/End: Complemental strand, 30317339 - 30317244
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacc 359  Q
    ||||||||||||||||||||| ||||| |||| ||| ||||||||| |||||||||| || ||||||||| |||||||||| |||  |||||||||    
T  30317339 catcggtttccgacccaccaaaggtgggcgactaattcggctcgtgcgtagaggcattcgtactggccaagcgttgttccctctgagaatcgaacc 30317244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 268 - 366
Target Start/End: Original strand, 42722585 - 42722684
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| |||||||| || |||| ||||| |||||||||| || ||||||||||||||||||||||| ||||||||| ||||| ||| |||||| |||||    
T  42722585 cggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaattgaacccggtatt 42722684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 18531622 - 18531472
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||| || |||||||||  |||| || |||||  | ||||||||||||||| ||||  ||||||||||||||  ||| ||   ||||||    
T  18531622 cggtttccgacccacaaaaggtggacgaataatctggttcgtgcatggaggcatgcgcactgaccaagtgttgttccccctggggatcaaatatagtatt 18531523  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || |||||| |||||| ||| ||| || ||||||||||||||||| |||||    
T  18531522 ccccagatacgttcttggaatgagctttttgccactagagcccaatcaact 18531472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 265 - 342
Target Start/End: Complemental strand, 50486049 - 50485971
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttc 342  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||| |||||||||||||  |||||||| ||||||||    
T  50486049 catcggtttccgacccactaatggtgggcgactaatccggctcgtgcgtagaggcatgcgttctggccaatcgttgttc 50485971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 16645221 - 16645120
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||  ||||| |||| |||| | ||| ||||||||||||||| |||||||||| ||||||||  |||| ||||||||||| |||||    
T  16645221 cggtttccgacccaccacaggtgggcgactaatcagactcatgtgtagaggcatgcacactggccaagcgttgttcttcctgaaaatcgaacccggtatt 16645122  T
Q  367 cc 368  Q
    ||    
T  16645121 cc 16645120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 417
Target Start/End: Complemental strand, 27248527 - 27248381
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||| |||| ||||| ||||| |||| |||| ||||| || ||||||||||||||  ||||||| ||||||||| ||||| | |||||||| |||||||    
T  27248527 gtttctgacctaccaaaggtgggcgactaatctggctcctgcgtagaggcatgcgc--tggccaagcgttgttcctcctgggactcgaacccggtattcc 27248430  T
Q  369 tcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     | |||| || ||| ||||||| |  |||||||| ||||||||||||||    
T  27248429 ccggatacgtccttggaaggagctcgttgccactggagcccaagcaact 27248381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 269 - 412
Target Start/End: Original strand, 36262776 - 36262918
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    |||||| |||||||||| ||||| |||| |||||| |||||| ||||||||||| ||||||||||| |||||||  |||||| |||||||||| ||||||    
T  36262776 ggtttctgacccaccaaaggtgggcgactaatccgactcgtgcgtagaggcatgtgcactggccaagcgttgtt--ccctgggaatcgaacccggtattc 36262873  T
Q  368 ctcagatatgttcttagaaggagtttattgccactagagcccaag 412  Q
      | | || || ||| ||||||| || |||||||| |||| ||||    
T  36262874 tccgggtacgtccttggaaggagcttcttgccactggagctcaag 36262918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 417
Target Start/End: Original strand, 3574484 - 3574604
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttatt 396  Q
    |||||| |||||| |||||||||||||||||||||||  ||||||| |||||| ||| |||| | |||||||  || || || ||| ||||||| |  ||    
T  3574484 aatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttctccctgggaattgaactcggtattccctaggtacgtccttggaaggagctcctt 3574583  T
Q  397 gccactagagcccaagcaact 417  Q
    |||||| ||||||||||||||    
T  3574584 gccactggagcccaagcaact 3574604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 10541089 - 10541017
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcct 369  Q
    |||| |||||||| |||||||||||| |||||||||| ||||||| ||||||||||||||||||  |||||||    
T  10541089 aatctggctcgtgcgtagaggcatgcacactggccaagcgttgtttcccctggaaatcgaacccgatattcct 10541017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 282 - 417
Target Start/End: Original strand, 41339417 - 41339553
Alignment:
Q  282 ccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttc 380  Q
    |||||||||| |||| |||||| |||||| |||||||||| | |||||||||| ||||||||||| ||| | |||||||| ||||||  | | || || |    
T  41339417 ccaatggtgggcgactaatccgtctcgtgcgtagaggcatacacactggccaagcgttgttccccttgggagtcgaacccggtattctccgggtacgtcc 41339516  T
Q  381 ttagaaggagtttattgccactagagcccaagcaact 417  Q
    || ||||||| |  ||||||||||||||||| |||||    
T  41339517 ttggaaggagctccttgccactagagcccaaacaact 41339553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 345
Target Start/End: Original strand, 47682390 - 47682468
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttcccc 345  Q
    |||||||||||||||||| ||||| |||| || |||||||||| |||||| |||| |||||||||||||||| ||||||    
T  47682390 cggtttccgacccaccaaaggtgggcgactaacccggctcgtgcgtagagacatgtgcactggccaaacgttattcccc 47682468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 269 - 366
Target Start/End: Original strand, 48317284 - 48317382
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||| ||||| ||| ||||| |||| ||||||||||||| |||||||||| | ||||| |||| ||||||||| |||| |||||||| ||||||||    
T  48317284 ggtttccaacccatcaacggtgggcgactaatccggctcgtgcgtagaggcatacacactgaccaagcgttgttcctcctgaaaatcgaatccagtatt 48317382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 46108797 - 46108716
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttcccc 345  Q
    ||||||||||||||||| |||  ||||||||| |||| ||||| || ||||||||||||||||| |||||| ||||||||||    
T  46108797 catcggtttccgacccatcaaaagtggacgactaatctggctcatgcgtagaggcatgcgcactagccaaatgttgttcccc 46108716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 269 - 354
Target Start/End: Complemental strand, 20354739 - 20354653
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatc 354  Q
    ||||||| || || |||| ||||||||| |||||| ||| || ||||||||||||||||| ||||| |||||||| |||||||||||    
T  20354739 ggtttccaactcatcaatagtggacgactaatccgactcatgcgtagaggcatgcgcactagccaagcgttgttctccctggaaatc 20354653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 370
Target Start/End: Complemental strand, 4736698 - 4736597
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||||||||||||||| ||||| |||| ||| ||||| ||  |||||||||||| || ||||||||||||||| || |||  ||| |||||| |||||||    
T  4736698 gtttccgacccaccaacggtgggcgactaattcggcttgtacgtagaggcatgcacattggccaaacgttgtttccactgagaattgaacccggtattcc 4736599  T
Q  369 tc 370  Q
    ||    
T  4736598 tc 4736597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 416
Target Start/End: Complemental strand, 7742016 - 7741879
Alignment:
Q  280 caccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgt 378  Q
    |||||| | |||||||| |||| || ||||| ||||||||||| ||||||||||| ||||||| ||||||  | | ||||||  ||||||||  ||| ||    
T  7742016 caccaaagatggacgactaatctggatcgtgcgtagaggcatgtgcactggccaagcgttgttacccctgagattggaacccgatattcctcgaatacgt 7741917  T
Q  379 tcttagaaggagtttattgccactagagcccaagcaac 416  Q
     |||  |||||| |  ||||||||||||||||||||||    
T  7741916 acttgaaaggagctccttgccactagagcccaagcaac 7741879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 335
Target Start/End: Complemental strand, 14567339 - 14567274
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaac 335  Q
    ||||||||||||||| || |  |||| ||||||||||||| |||||||||||||||||||||||||    
T  14567339 tttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaaac 14567274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 6032651 - 6032798
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| ||| |||||| |||||||||| |  ||||||||||| ||||||| ||| |   || || |||| |||| |||||| |||||    
T  6032651 cggtttccgacccaccaaaggtagacgactaatccggctcattcgtagaggcatgagcactggtcaagc---gtacctcctgaaaattgaacccggtatt 6032747  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | || || ||| ||||||| |  |||||||| ||||||||||||||    
T  6032748 ccccgggtacgtccttggaaggagctccttgccactggagcccaagcaact 6032798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 417
Target Start/End: Original strand, 12703583 - 12703703
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttatt 396  Q
    |||||||||  || |||||| ||| | |||||| ||| |||||||||| ||||||||||||| |||||||||||   || || ||| ||||||  |  ||    
T  12703583 aatccggcttatgcgtagagacatacacactggtcaagcgttgttcccactggaaatcgaactcagtattcctcgagtacgtcctttgaaggatctcctt 12703682  T
Q  397 gccactagagcccaagcaact 417  Q
    |||||| ||||||||||||||    
T  12703683 gccactggagcccaagcaact 12703703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 357
Target Start/End: Complemental strand, 14859392 - 14859304
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaa 357  Q
    ||||||||| || ||| |||||| ||| |||| |||||||| |||||| |||||||||||| ||||| ||||||| |||| ||||||||    
T  14859392 gtttccgacacatcaaaggtggatgactaatctggctcgtgcgtagagacatgcgcactggtcaaacattgttcctcctgaaaatcgaa 14859304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 17080116 - 17080068
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttcccc 345  Q
    |||||||||| || ||||||||||||||||||||||| |||||||||||    
T  17080116 aatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcccc 17080068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 26237427 - 26237527
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    |||| |||||||||||| ||||||||||| || |||||| ||| || ||| || ||| |||||||  ||||||||||| ||||||  |||||||||||||    
T  26237427 catcagtttccgacccatcaatggtggactactaatccgactcatgcgtaaagacatacgcactgatcaaacgttgtttcccctgagaatcgaacccagt 26237526  T
Q  364 a 364  Q
    |    
T  26237527 a 26237527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 344
Target Start/End: Original strand, 37369047 - 37369127
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgaca-atccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccc 344  Q
    |||||||||||||  ||||||| |||| ||||  ||||| |||||| |||||||||||| |||||| ||||||||||||||    
T  37369047 catcggtttccgattcaccaatagtgggcgacttatccgactcgtgcgtagaggcatgcacactggacaaacgttgttccc 37369127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 54946352 - 54946284
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaac 335  Q
    |||||||||||||||||||| ||| |||| |||||||||| || ||||||||||||| |||| ||||||    
T  54946352 cggtttccgacccaccaatgatgggcgactaatccggctcatgcgtagaggcatgcggactgaccaaac 54946284  T

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Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 343
Target Start/End: Complemental strand, 21192713 - 21192667
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttcc 343  Q
    |||||| |||||| ||||||||||||||||||||| |||||||||||    
T  21192713 aatccgactcgtgcgtagaggcatgcgcactggcccaacgttgttcc 21192667  T

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Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 357
Target Start/End: Complemental strand, 35359839 - 35359749
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaa 357  Q
    |||||||||||||||| || |||| |||| |||||  ||  || || |||||||||||||||| ||||||||||||||||||  |||||||    
T  35359839 cggtttccgacccacctatagtgggcgactaatccaacttatgcgttgaggcatgcgcactggtcaaacgttgttccccctgagaatcgaa 35359749  T

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Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 48352538 - 48352592
Alignment:
Q  289 tggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttc 342  Q
    |||||||| |||||||||||||||  |||||||| ||||||||||||||||||||    
T  48352538 tggacgactaatccggctcgtgtgaggaggcatgtgcactggccaaacgttgttc 48352592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 15839973 - 15840014
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgtt 338  Q
    |||||||||| || ||||||||||||||||||||||||||||    
T  15839973 aatccggctcatgcgtagaggcatgcgcactggccaaacgtt 15840014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 38168359 - 38168259
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||| |||||| || |||| ||||| |||||||||| || ||||||||||| ||||||||||| ||||||||| | | | |||||||||  |||||    
T  38168359 cggtttccaacccactaaaggtgaacgactaatccggctcatgcgtagaggcatg-gcactggccaagcgttgttcctcttaggaatcgaacctggtatt 38168261  T
Q  367 cc 368  Q
    ||    
T  38168260 cc 38168259  T

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Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 342
Target Start/End: Complemental strand, 8424622 - 8424582
Alignment:
Q  302 ggctcgtgtgtagaggcatgcgcactggccaaacgttgttc 342  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  8424622 ggctcgtgcatagaggcatgcgcactggccaaacgttgttc 8424582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 14597908 - 14597976
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaac 335  Q
    |||||| ||| ||| ||| |||||||||| ||||| | ||||| |||||||||||||||||||||||||    
T  14597908 cggttttcgatccatcaaaggtggacgactaatccagttcgtgcgtagaggcatgcgcactggccaaac 14597976  T

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Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 367
Target Start/End: Original strand, 48834708 - 48834807
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| ||| | |||| |||||| ||| ||| |||||||||| ||||||||| |   || || |||||||||||||||||| |||||    
T  48834708 cggtttccgacccaccaaaggtaggcgactaatccgactcatgtatagaggcatgtgcactggcctagtattatt-cccctggaaatcgaacccggtatt 48834806  T

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Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 411
Target Start/End: Original strand, 55005317 - 55005458
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    ||||||||||||| ||||  ||| |||| |||||| || ||| ||||||||||||||| ||| ||| ||||||| ||||||  |||||||  | |||||     
T  55005317 ggtttccgacccatcaat--tgggcgactaatccgacttgtgcgtagaggcatgcgcaatggtcaagcgttgtttcccctgcgaatcgaattcggtattt 55005414  T
Q  368 ctcagatatgttcttagaaggagtttattgccactagagcccaa 411  Q
    | |||||| ||  || ||||||| | |||||||| |||||||||    
T  55005415 cccagatacgtctttggaaggagctcattgccaccagagcccaa 55005458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 417
Target Start/End: Original strand, 15732495 - 15732606
Alignment:
Q  306 cgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgccactaga 405  Q
    |||| ||||||||||| |||||||||||  |||||||||| |   |||||||||| ||||||  | |||| || ||| |||| | ||| |||||||| ||    
T  15732495 cgtgcgtagaggcatgtgcactggccaagtgttgttccccatatgaatcgaacccggtattctccggatacgtccttggaagaattttcttgccactgga 15732594  T
Q  406 gcccaagcaact 417  Q
    |||||| |||||    
T  15732595 gcccaaacaact 15732606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 354
Target Start/End: Complemental strand, 15829802 - 15829715
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatc 354  Q
    ||||||| || |||||||||||||| ||| |||||||||| ||  |||| |||||||||||||||||  |||| | |||||| |||||    
T  15829802 cggtttctgatccaccaatggtggaggactaatccggctcatgcctagaagcatgcgcactggccaagtgttgattcccctgaaaatc 15829715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 368
Target Start/End: Complemental strand, 31588792 - 31588686
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggcca--aacgttgttccccctggaaatcgaaccca 361  Q
    ||||||||||||| |||||||  |||  |||| |||||||||| || |||||| |||||||||||||||  | ||||||| || |||| |||| ||||||    
T  31588792 catcggtttccgatccaccaaaagtgagcgactaatccggctcatgcgtagagacatgcgcactggccaagagcgttgtttcctctgggaatcaaaccca 31588693  T
Q  362 gtattcc 368  Q
     ||||||    
T  31588692 atattcc 31588686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 417
Target Start/End: Original strand, 41162893 - 41163040
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcct 369  Q
    ||||||| ||| ||| ||||| |||| ||| |||||| ||  |||| |||||  ||||||||||  ||||||||| ||||||||||||| | ||||| |     
T  41162893 tttccgatccatcaaaggtgggcgactaattcggctcatgcatagaagcatgtacactggccaagtgttgttccctctggaaatcgaactcggtatttcc 41162992  T
Q  370 cagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    | |||| || ||| ||||||| |  ||| |||| ||||||||||||||    
T  41162993 cggatacgtccttggaaggagctccttgtcactggagcccaagcaact 41163040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 368
Target Start/End: Original strand, 42722394 - 42722487
Alignment:
Q  275 cgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||||||||| ||||||||||| |||||| ||| ||  |||||| ||||||||||| |||  |||||| ||||||| |||| ||||| |||||||    
T  42722394 cgacccaccattggtggacgactaatccgactcatgcatagaggtatgcgcactggtcaagtgttgtt-cccctgggaatcaaacccggtattcc 42722487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 390
Target Start/End: Complemental strand, 14568032 - 14567939
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggag 390  Q
    |||||| |||||| ||||||| ||| ||||||| ||| |||| ||| |||||  |||||||||  ||||||| || ||| || |||||||||||    
T  14568032 aatccgactcgtgcgtagaggtatgtgcactggtcaagcgttattctccctgagaatcgaacctggtattccccaaatacgtccttagaaggag 14567939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 24850632 - 24850713
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttcccc 345  Q
    ||||||||||||| |||  ||||||||| ||  ||||| |||| || ||||||||||||||||||| |||  ||||||||||    
T  24850632 catcggtttccgatccaataatggtggatgaataatccagctcatgcgtagaggcatgcgcactggtcaagtgttgttcccc 24850713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 23788470 - 23788426
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgtt 341  Q
    ||||| ||||||| |||||||||||||||||| | ||||||||||    
T  23788470 aatccagctcgtgcgtagaggcatgcgcactgactaaacgttgtt 23788426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 49952184 - 49952228
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgtt 341  Q
    |||||||||| || |||||||| ||||||||| ||||||||||||    
T  49952184 aatccggctcatgcgtagaggcgtgcgcactgaccaaacgttgtt 49952228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 55703790 - 55703834
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgtt 341  Q
    ||||||||||||| || ||| ||||||||||| ||||||||||||    
T  55703790 aatccggctcgtgggttgagacatgcgcactgaccaaacgttgtt 55703834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 268 - 375
Target Start/End: Original strand, 25540412 - 25540520
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||    
T  25540412 cggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctaggaatcgaacccagtatt 25540511  T
Q  367 cctcagata 375  Q
    || ||||||    
T  25540512 ccccagata 25540520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 6358159 - 6358309
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| |||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||  |||||||||||||||||||||| |  |||||    
T  6358159 cggttttcgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaatctggtatt 6358258  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||| || ||| ||| ||| || |||||||| |||||||| |||||    
T  6358259 ccccggatacgtcctttgaatgagcttcttgccactggagcccaaacaact 6358309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 44139582 - 44139432
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||||| |||||| |||| ||||||||||||| ||||||||| ||||||||||||| ||||||||||||||| |||||||||| |||||    
T  44139582 cggtttccgacccaccattggtgggcgactaatccggctcgtgcgtagaggcacgcgcactggccaagcgttgttccccctgggaatcgaacccggtatt 44139483  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || |||||   | ||| |||||||||  |  ||||| ||||||||||||||    
T  44139482 ccccagatgcatccttggaaggagttcctcaccactggagcccaagcaact 44139432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 265 - 417
Target Start/End: Original strand, 42770656 - 42770809
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||| ||||||||||| |||||||||  ||||||||||||| | ||||||||||||||||||||| ||||||||||||||  ||| |||||| ||    
T  42770656 catcggttttcgacccaccaaaggtggacgattaatccggctcgtgcgaagaggcatgcgcactggccaagcgttgttccccctgagaattgaacccggt 42770755  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||| ||| |||| || ||| ||||||| |  |||||||| ||||||||||||||    
T  42770756 atttctcggatacgtccttggaaggagctctttgccactggagcccaagcaact 42770809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 270 - 417
Target Start/End: Complemental strand, 38005498 - 38005350
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||||||| ||||||| ||||| |||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||    
T  38005498 gtttccgatccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccagtattcc 38005399  T
Q  369 tcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     | | || || ||| ||||||| |  |||||||| |||||||| |||||    
T  38005398 ccgggtacgtccttggaaggagctccttgccactggagcccaaacaact 38005350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 7747372 - 7747222
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||| || |||| ||||| |||||||||| || |||||||||||| |||||||||||||||||||| ||| | |||||||||| |||||    
T  7747372 cggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcctcctaggaatcgaacccggtatt 7747273  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||| || ||| ||||||| |  |||||||| ||||||||||||||    
T  7747272 ccccggatacgtccttggaaggagctccttgccactggagcccaagcaact 7747222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 272 - 417
Target Start/End: Complemental strand, 22593228 - 22593083
Alignment:
Q  272 ttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctc 370  Q
    |||||||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||| |    
T  22593228 ttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa-cgttgttccccctgggaatcgaactcagtattcccc 22593130  T
Q  371 agatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     | || || ||| ||||||| |  |||||||| |||| |||||||||    
T  22593129 gggtacgtccttggaaggagctccttgccactggagcacaagcaact 22593083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 12455408 - 12455307
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||||||||  |||| ||||||||||||| |||||||||||||||||||| || ||||||| |||||||||||||||||| |||||    
T  12455408 cggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggctaagcgttgtttcccctggaaatcgaacccggtatt 12455309  T
Q  367 cc 368  Q
    ||    
T  12455308 cc 12455307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 269 - 417
Target Start/End: Complemental strand, 331598 - 331449
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    ||||||| ||||||||| ||||| |||| |||||||||| || ||||| |||||||||||||||||  |||||||||||||| |||||||||| ||||||    
T  331598 ggtttccaacccaccaaaggtgggcgactaatccggctcatgcgtagaagcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattc 331499  T
Q  368 ctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    | | | || || ||| ||| ||| | ||||||||| ||||||||||||||    
T  331498 cccgggtacgtccttggaaagagctcattgccactggagcccaagcaact 331449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 270 - 366
Target Start/End: Original strand, 10026626 - 10026723
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||| ||||| |||| |||||||||| || ||||||||||||||||||||||||||||||||||||||  |||||||||| |||||    
T  10026626 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgagaatcgaacccggtatt 10026723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 265 - 368
Target Start/End: Complemental strand, 11069979 - 11069875
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||||||||||||||| |||||||||| ||| | ||||||| ||||||| ||||||||||||||||||||||||||||| | |||||||||  ||    
T  11069979 catcggtttccgacccaccaacggtggacgactaattcagctcgtgcgtagaggtatgcgcactggccaaacgttgttccccctcggaatcgaacctggt 11069880  T
Q  364 attcc 368  Q
    |||||    
T  11069879 attcc 11069875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 8410229 - 8410079
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||| ||||  |||| |||| ||||||||||||| |||||||||||||||||||||||  |||||||||||||| ||||||||||  ||||    
T  8410229 cggtttccgaccccccaaaagtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgatatt 8410130  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |  | | || || ||| ||||||| |  |||||||| ||||||||||||||    
T  8410129 ctccgggtacgtccttggaaggagctccttgccactggagcccaagcaact 8410079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 37560271 - 37560121
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| ||||||| ||| |||||||||  ||||||||||||| |||||||||||||||||| |||||||||||||||| ||  |||||||||  |||||    
T  37560271 cggttttcgacccatcaaaggtggacgattaatccggctcgtgcgtagaggcatgcgcactgaccaaacgttgttccccttgagaatcgaacctggtatt 37560172  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |||| | || || ||| ||||||| || || ||||| |||||||| |||||    
T  37560171 cctcgggtacgtccttggaaggagcttcttaccactggagcccaaacaact 37560121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 10823158 - 10823057
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||| || ||||| |||| ||||||||||||| ||||||||||||||||||||||| ||||||||| ||||| |||| ||||| |||||    
T  10823158 cggtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcaaacccggtatt 10823059  T
Q  367 cc 368  Q
    ||    
T  10823058 cc 10823057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 12864322 - 12864221
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||||||||||||||||| |||| ||||| || | |||||||||||||||| ||||  |||||||||||||||||||||| || |||||    
T  12864322 cggtttccgacccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaatccggtatt 12864223  T
Q  367 cc 368  Q
    ||    
T  12864222 cc 12864221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 270 - 417
Target Start/End: Complemental strand, 34356302 - 34356154
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||||||||||| |||||||| ||||  |||||||||| ||  ||||||||||||||||| ||||  ||||||||||||||||||||||||| |||||||    
T  34356302 gtttccgacccatcaatggtgcacgattaatccggctcatgcatagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaacccggtattcc 34356203  T
Q  369 tcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     |||||| || ||| |||  || |  |||||||| |||||||| |||||    
T  34356202 ccagatacgtccttggaaatagctccttgccactggagcccaaacaact 34356154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 268 - 358
Target Start/End: Complemental strand, 16325693 - 16325602
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaac 358  Q
    ||||||||||||||||||||||||||||| |||| ||||| || |||||||||||| ||||||||||  |||||||||||||| ||||||||    
T  16325693 cggtttccgacccaccaatggtggacgactaatctggctcatgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaac 16325602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 270 - 368
Target Start/End: Complemental strand, 38962859 - 38962760
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||| |||||||||| |||||||||| ||||||| || || ||||||||||||||||||||||| ||||||||| |||| ||||||||||| |||||||    
T  38962859 gtttctgacccaccaaaggtggacgactaatccggttcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgaaaatcgaacccggtattcc 38962760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 415
Target Start/End: Original strand, 41031915 - 41032061
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    ||||||||||||||||| |||||  ||| ||||||||||||| |||||||||||| ||||||||||  |||||||||||||| |||||||||| || |||    
T  41031915 ggtttccgacccaccaaaggtgggtgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtgttc 41032014  T
Q  368 ctcagatatgttcttagaaggagtttattgccactagagcccaagcaa 415  Q
    | | | || || ||| ||||||| |  |||||||| ||||||||||||    
T  41032015 c-ctggtacgtccttggaaggagctccttgccactggagcccaagcaa 41032061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 3643895 - 3644045
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||| |||||||| |||||||||| ||||| |||| || ||||||||||||||||||||||| ||||||||| | | |||||| ||||| |||||    
T  3643895 cggtttccggcccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttcctcgtagaaatcaaacccggtatt 3643994  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||| || ||| ||| ||| |  || ||||| ||||||||||||||    
T  3643995 ccccggatacgtccttggaatgagctcctttccactggagcccaagcaact 3644045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 18902538 - 18902688
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| ||||| |||| |||| |||||||| |||||| || ||||||||| ||| ||||||||||| ||| |||||||||| |||||    
T  18902538 cggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcgcactggtcaagcgttgttccccgtgggaatcgaacccggtatt 18902637  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || |   || || ||| ||||||| |  |||||||| ||||||||||||||    
T  18902638 ccccgagtacgtccttggaaggagctccttgccactggagcccaagcaact 18902688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 39201516 - 39201666
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| |||| ||||| |||||||||| || |||||||||||| |||||||||||| ||||||||||||  |||||||  | |||||    
T  39201516 cggtttccgacccaccaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacattgttccccctgagaatcgaattcggtatt 39201615  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||   || || ||| ||||||| |  ||||||||| ||||||| |||||    
T  39201616 cctcgagtacgtccttggaaggagctccttgccactatagcccaatcaact 39201666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 270 - 386
Target Start/End: Complemental strand, 35946834 - 35946718
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||| || ||||||| ||||||| ||||| | |||||||| | |||||||    
T  35946834 gtttccgacccaccaatggtggacgactaatccggctcgtgcgtagaggcatgcacaatggccaagcgttgtt-cccctaggaatcgaactcggtattcc 35946736  T
Q  369 tcagatatgttcttagaa 386  Q
     | |||| || |||||||    
T  35946735 ccggatacgtccttagaa 35946718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 41220733 - 41220632
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||| || |||| ||||| ||| |||||| || ||||||||||||||||||||||| ||||||||| ||||| |||||||||| |||||    
T  41220733 cggtttccgacccactaaaggtgaacgactaattcggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtatt 41220634  T
Q  367 cc 368  Q
    ||    
T  41220633 cc 41220632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 270 - 417
Target Start/End: Original strand, 10046487 - 10046634
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||||||||||||||| ||||| |||| |||||||||| || |||||||||||||||||| | |||||||||| ||| ||  |||||||||| ||||||     
T  10046487 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactgtc-aaacgttgtttcccttgagaatcgaacccggtattct 10046585  T
Q  369 tcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     | |||| |||||| ||||||| |  |||||| | ||||||||||||||    
T  10046586 ccggatacgttcttggaaggagctccttgccattggagcccaagcaact 10046634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 297 - 417
Target Start/End: Original strand, 45263705 - 45263825
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttatt 396  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||| |||| |||||||||| ||||||| | ||||  || ||  |||||| |  ||    
T  45263705 aatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccggataaatttttgaaaggagctcctt 45263804  T
Q  397 gccactagagcccaagcaact 417  Q
    |||||| |||||||| |||||    
T  45263805 gccactggagcccaaacaact 45263825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 7787154 - 7787004
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| ||| ||||||| | ||| |||| ||||||||||||| ||||||||||||| |||||||||   |||||||||||||||||||||||| |||||    
T  7787154 cggttttcgatccaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcgtactggccaagtattgttccccctggaaatcgaacccggtatt 7787055  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | || || ||   ||||||||  |||||||| |||||||| |||||    
T  7787054 ccccgggtacgtcctagaaaggagttccttgccactggagcccaaccaact 7787004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 16035035 - 16034885
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||| || ||||||||  |||| ||||||||||||  ||| |||||||| |||||| ||| ||||||||| |||| ||||||||||| |||||    
T  16035035 cggtttccgactcatcaatggtgagcgactaatccggctcgtacgtataggcatgcacactggtcaagcgttgttccgcctgaaaatcgaacccggtatt 16034936  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |||| |||| || ||| |||||||||  || |||||  || ||||||||||    
T  16034935 cctcggatacgtccttggaaggagttccttaccactgaagtccaagcaact 16034885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 279 - 368
Target Start/End: Original strand, 39806904 - 39806994
Alignment:
Q  279 ccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||||| |||||| ||| |||||| |||||||||||||||||||||||||||||||||||||| | | ||| |||||||||| |||||||    
T  39806904 ccaccaaaggtggatgactaatccgactcgtgtgtagaggcatgcgcactggccaaacgttgtttctcttgggaatcgaacccggtattcc 39806994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 20612542 - 20612694
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aat-ccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccc-cctggaaatcgaacccagta 364  Q
    ||||||||||||||||||||||||||||| ||| ||||||| ||  ||||||||||||||||||||||  ||||||||| ||||  |||||||||| |||    
T  20612542 cggtttccgacccaccaatggtggacgactaatcccggctcatgcatagaggcatgcgcactggccaagtgttgttccctcctgagaatcgaacccggta 20612641  T
Q  365 ttcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |||| |  |||    ||| ||||||| |  |||||||| ||||||||||||||    
T  20612642 ttccccgaatacaaccttggaaggagctccttgccactggagcccaagcaact 20612694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 417
Target Start/End: Complemental strand, 15079546 - 15079431
Alignment:
Q  302 ggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgccac 401  Q
    |||||||| |||||| ||||| |||||| ||| |||||||||||||||||||||||||| ||||||| | | || || ||| ||||| |||  |||||||    
T  15079546 ggctcgtgcgtagagtcatgcacactggtcaagcgttgttccccctggaaatcgaaccctgtattccccgggtacgtccttggaaggtgttccttgccac 15079447  T
Q  402 tagagcccaagcaact 417  Q
      ||||||||||||||    
T  15079446 cggagcccaagcaact 15079431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 411
Target Start/End: Original strand, 2528379 - 2528493
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttatt 396  Q
    |||||||||  ||||||||||||||| ||||| |||| ||||||||||||||| |||||||||| || ||||||   || || ||| ||||||| | |||    
T  2528379 aatccggcttatgtgtagaggcatgcacactgaccaagcgttgttccccctgggaatcgaacccggtgttcctcgagtacgtccttggaaggagctcatt 2528478  T
Q  397 gccactagagcccaa 411  Q
    |||||| ||||||||    
T  2528479 gccactggagcccaa 2528493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 21286542 - 21286392
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||| ||||||||||| ||   ||| ||||| ||||||| ||||||||||||||||||| ||| ||||||| | ||||| |||||||||| |||||    
T  21286542 cggtttccaacccaccaatgatgagtgactaatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgtttcgcctgggaatcgaacccggtatt 21286443  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||| || ||| ||||||| |  |||||||| |||| ||| |||||    
T  21286442 ccccggatacgtccttggaaggagctccttgccactggagctcaaacaact 21286392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 368
Target Start/End: Complemental strand, 29422310 - 29422212
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||||| ||| ||| |||||||||| ||||||||||||| ||| ||| |||| || |||||||  ||||||||| |||||||||||||||||||||||    
T  29422310 tttccgatccatcaaaggtggacgactaatccggctcgtgcgtaaaggtatgctcattggccaagtgttgttccctctggaaatcgaacccagtattcc 29422212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 368
Target Start/End: Original strand, 9360756 - 9360857
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||| ||||| || ||||| |||| ||| ||||||||| ||||||||||||||||||||||||||||||| || || | |||||||||  |||||    
T  9360756 cggtttccggcccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcctctagtaatcgaacctggtatt 9360855  T
Q  367 cc 368  Q
    ||    
T  9360856 cc 9360857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 360
Target Start/End: Complemental strand, 10669690 - 10669597
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||||||||||||||||| |||| ||||  |||||| |||||| |||||| |||||||||||||||| |||||||| |||||| |||| |||||    
T  10669690 cggtttccgacccaccaaaggtgaacgattaatccgactcgtgcgtagagacatgcgcactggccaagcgttgttctccctgggaatcaaaccc 10669597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 360
Target Start/End: Original strand, 14169617 - 14169710
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||||||||||||||||||||| |||||| |||||||||| || |||||| |||||||||||| |||  ||||||||||| |  ||||||||||    
T  14169617 cggtttccgacccaccaatggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaagtgttgttcccccggagaatcgaaccc 14169710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 348
Target Start/End: Complemental strand, 27726038 - 27725957
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctg 348  Q
    ||||||||||||||||| |||||| |||| ||||||||| ||| ||||||||||||||||||||||| | ||||||| ||||    
T  27726038 cggtttccgacccaccattggtgggcgactaatccggctagtgcgtagaggcatgcgcactggccaagcattgttcctcctg 27725957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 357
Target Start/End: Original strand, 28525465 - 28525554
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttg-ttccccctggaaatcgaa 357  Q
    ||||||||||||  || |||||| ||| ||||||||||||| |||||||||||||||||||||||  |||| ||||||||||||||||||    
T  28525465 gtttccgacccattaaaggtggatgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgtttccccctggaaatcgaa 28525554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 392
Target Start/End: Original strand, 28616387 - 28616512
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||| ||||||| || | ||| |||| |||| |||||||| |||||||||||||||||| ||||  ||| ||||||||| |||||||||||  ||||    
T  28616387 cggtttctgacccactaaagatgggcgactaatctggctcgtgcgtagaggcatgcgcactgcccaagtgttattccccctgaaaatcgaacccgatatt 28616486  T
Q  367 cctcagatatgttcttagaaggagtt 392  Q
    || | ||||||| ||| |||||||||    
T  28616487 ccgcggatatgtccttggaaggagtt 28616512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 289 - 411
Target Start/End: Complemental strand, 25549805 - 25549682
Alignment:
Q  289 tggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaag 387  Q
    |||||||| ||||||||||||| ||||||||||| ||||| |||||| ||||||  ||||   |||||||||||||||||| || ||| || ||| ||||    
T  25549805 tggacgactaatccggctcgtgcgtagaggcatgtgcactagccaaatgttgttttccctaagaatcgaacccagtattccccaaatacgtacttggaag 25549706  T
Q  388 gagtttattgccactagagcccaa 411  Q
    ||| |  |||||||| ||||||||    
T  25549705 gagctccttgccactggagcccaa 25549682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 44945691 - 44945542
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||| |||| || ||||| |||| ||||||||||||| |||||||||||||||||  |||| ||||||||| | ||| |||| |||||||||||    
T  44945691 cggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactatccaagcgttgttcctc-tgggaatcaaacccagtatt 44945593  T
Q  367 cctcaga-tatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    | || || || || ||| ||||||| |  |||||||| ||||||||||||||    
T  44945592 c-tccgagtacgtccttggaaggagctccttgccacttgagcccaagcaact 44945542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 2550966 - 2550816
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| | |||||||||  |||| |||| |||||||||| || |||||| ||||||||||||| ||  |||||||| ||||| ||||||||||  ||||    
T  2550966 cggttttcaacccaccaaaagtgggcgactaatccggctcatgcgtagagacatgcgcactggctaagtgttgttcctcctgggaatcgaacccgatatt 2550867  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||| || |||  |||||| |  |||||||| ||||||||||||||    
T  2550866 ccccggatacgtccttgtaaggagctccttgccactggagcccaagcaact 2550816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 370
Target Start/End: Original strand, 3811696 - 3811802
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    |||||||||| |||||||||| ||||| |||  |||||||||| || ||||||||||||||| || ||||  ||||||||| |||| ||||||||||  |    
T  3811696 catcggtttctgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgcgcattgaccaagtgttgttccctctgggaatcgaacccgat 3811795  T
Q  364 attcctc 370  Q
    |||||||    
T  3811796 attcctc 3811802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 367
Target Start/End: Original strand, 3848929 - 3849022
Alignment:
Q  275 cgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    ||||||| ||| |||| ||||| |||||| |||||| |||||| ||||||| |||||||||||||||| ||||||  |||||||||| ||||||    
T  3848929 cgacccatcaaaggtgaacgactaatccgactcgtgcgtagagacatgcgccctggccaaacgttgtttcccctgataatcgaacccggtattc 3849022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 24179657 - 24179588
Alignment:
Q  277 acccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttcccc 345  Q
    ||||||||| | |||||||| |||||||||| || ||||||||||| |||||||||||||||||||||||    
T  24179657 acccaccaaagatggacgactaatccggctcatgcgtagaggcatgtgcactggccaaacgttgttcccc 24179588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 411
Target Start/End: Original strand, 19976859 - 19976959
Alignment:
Q  311 gtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgccactagagccca 410  Q
    |||||| ||||||||||| ||||||||| ||||||||| ||||||||||| ||||||| | |||| || ||| ||| ||| |  |||||||| |||||||    
T  19976859 gtagagacatgcgcactgaccaaacgttattccccctgaaaatcgaacccggtattccccggatacgtccttggaaagagctacttgccactggagccca 19976958  T
Q  411 a 411  Q
    |    
T  19976959 a 19976959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 417
Target Start/End: Original strand, 21180352 - 21180472
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttatt 396  Q
    ||||||||||||| ||||||||||| |||||||||||  ||||||| || ||| ||||||| || |||||| || | || || ||| ||||||| |  ||    
T  21180352 aatccggctcgtgcgtagaggcatgtgcactggccaagtgttgttctccatgggaatcgaatccggtattcttcgggtacgtccttggaaggagctcctt 21180451  T
Q  397 gccactagagcccaagcaact 417  Q
    |||||| |||||||| |||||    
T  21180452 gccactggagcccaaacaact 21180472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 417
Target Start/End: Original strand, 40968967 - 40969073
Alignment:
Q  311 gtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt-cctcagatatgttcttagaaggagtttattgccactagagccc 409  Q
    |||||||||| ||||||| ||||||||||||  ||||||||||||||||| ||||| ||| ||| | || ||| ||| ||  | ||||||||||||||||    
T  40968967 gtagaggcattcgcactgaccaaacgttgttttccctggaaatcgaacccggtattccctgaga-acgtccttggaatgaactcattgccactagagccc 40969065  T
Q  410 aagcaact 417  Q
    ||||||||    
T  40969066 aagcaact 40969073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 44193580 - 44193427
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagagg---catgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||| |||||||||||||||| |||| ||||| |||||| ||||||||   ||| | ||| || ||| |||||||||||||  ||||||||||  ||    
T  44193580 cggtttctgacccaccaatggtgggcgactaatccagctcgtatgtagaggagacattcacacgggtcaagcgttgttccccctaaaaatcgaacctggt 44193481  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||||| |||| ||  || ||| ||| | ||||||||| ||| ||||||||||    
T  44193480 attcctcggatacgtcattggaaagagctcattgccactggagtccaagcaact 44193427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 265 - 402
Target Start/End: Original strand, 13026416 - 13026554
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    |||||||||| |||| |||||  ||||  ||| |||||||||| || ||||||||||||||||||||||| | ||||||| ||||  ||||||||||  |    
T  13026416 catcggtttctgacctaccaaaagtggctgactaatccggctcatgcgtagaggcatgcgcactggccaatcattgttcctcctgataatcgaacccgat 13026515  T
Q  364 attcctcagatatgttcttagaaggagtttattgccact 402  Q
    |||||   |||| || ||| |||||||||  ||||||||    
T  13026516 attccctggatacgtccttggaaggagttccttgccact 13026554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 2149240 - 2149353
Alignment:
Q  305 tcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaac-ccagtattcctcagatatgttcttagaaggagtttattgccacta 403  Q
    ||||| |||||||||||||||||||||||||||| ||||||| |  |||||||| || ||||||| ||||||  | |||  ||| ||||  ||||||||     
T  2149240 tcgtgcgtagaggcatgcgcactggccaaacgttattcccccagtgaatcgaactccggtattccccagatacatccttgaaagaagttccttgccactg 2149339  T
Q  404 gagcccaagcaact 417  Q
    |||||||| |||||    
T  2149340 gagcccaaacaact 2149353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 29653691 - 29653626
Alignment:
Q  301 cggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||| |||||||||||||||||| |||| |||||||  |||||||||||||| || |||||    
T  29653691 cggctcgtgcgtagaggcatgcgcactgcccaagcgttgttttccctggaaatcgaatccggtatt 29653626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 368
Target Start/End: Original strand, 34346295 - 34346396
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| ||||  |||  |||| | ||| || |||||||||||| ||||||||||  |||||||||||||  |||| |||||||||||    
T  34346295 cggtttccgacccaccaaaggtgagcgattaatctgactcatgcgtagaggcatgcacactggccaagtgttgttccccctgataatcaaacccagtatt 34346394  T
Q  367 cc 368  Q
    ||    
T  34346395 cc 34346396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 417
Target Start/End: Original strand, 37804900 - 37805049
Alignment:
Q  269 ggtttccgacccaccaatggtggacgacaa-tccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    ||||||||||||| ||||||||| | |||| || | ||| || |||| |||||||||||| ||||| |||| |||||||||  ||||||| || |||||     
T  37804900 ggtttccgacccatcaatggtgggcaacaaatctgactcatgcgtagcggcatgcgcactagccaagcgttattccccctgtgaatcgaatccggtattt 37804999  T
Q  368 ctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||| | || || ||| | |||||||  ||||||||  |||||||||||||    
T  37805000 ctcgggtacgtccttgggaggagttccttgccactgtagcccaagcaact 37805049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 417
Target Start/End: Original strand, 14853421 - 14853525
Alignment:
Q  313 agaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgccactagagcccaag 412  Q
    |||||||| ||||||||||||| ||||||||||||| |||||||| |  ||||||| | ||||  | |||  ||||||||  |||||||| ||||||||     
T  14853421 agaggcatacgcactggccaaaagttgttccccctgaaaatcgaatctggtattccccggatacatccttgaaaggagttccttgccactggagcccaaa 14853520  T
Q  413 caact 417  Q
    |||||    
T  14853521 caact 14853525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 20116620 - 20116696
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttcc 343  Q
    |||||||||||||| ||| |||||||| | |||||||||| || ||||||||||||||| ||||||  |||||||||    
T  20116620 cggtttccgacccatcaaaggtggacggctaatccggctcatgcgtagaggcatgcgcattggccatgcgttgttcc 20116696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 345
Target Start/End: Original strand, 16813176 - 16813251
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttcccc 345  Q
    ||||| ||| ||||| | |||||||| |||||||||||||  |||||||||||| ||||| |||||||||||||||    
T  16813176 tttccaacctaccaaagatggacgactaatccggctcgtgcatagaggcatgcgtactggtcaaacgttgttcccc 16813251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 345
Target Start/End: Original strand, 16852455 - 16852530
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttcccc 345  Q
    ||||| ||| ||||| | |||||||| |||||||||||||  |||||||||||| ||||| |||||||||||||||    
T  16852455 tttccaacctaccaaagatggacgactaatccggctcgtgcatagaggcatgcgtactggtcaaacgttgttcccc 16852530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 355
Target Start/End: Complemental strand, 26805397 - 26805306
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcg 355  Q
    ||||||||| ||| ||||||| ||||| |||| |||||| ||| || ||||||||||| ||||||||||||||| ||| | |||| ||||||    
T  26805397 catcggttttcgagccaccaaaggtgggcgactaatccgactcatgcgtagaggcatgtgcactggccaaacgtcgtttctcctgaaaatcg 26805306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 361
Target Start/End: Complemental strand, 34722778 - 34722684
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccca 361  Q
    ||||||| || ||| ||| ||||| |||| ||||||||||||| |||||| |||| |||||| |||| |||||||| |||||  |||||||||||    
T  34722778 cggtttctgatccatcaaaggtgggcgactaatccggctcgtgcgtagagacatgtgcactgaccaagcgttgttctccctgagaatcgaaccca 34722684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 368
Target Start/End: Original strand, 15234113 - 15234170
Alignment:
Q  311 gtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||||||||||||||||| |||  |||||||||||||  ||||||||| ||||||||    
T  15234113 gtagaggcatgcgcactggtcaagtgttgttccccctgagaatcgaacctagtattcc 15234170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 375
Target Start/End: Complemental strand, 2785030 - 2784923
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||| || ||||| |||||||| |||| | ||| || |||||||||||||||||| |||||  |||||  ||||| ||||||||| | |||||    
T  2785030 cggtttccgactcatcaatgatggacgactaatctgactcatgcgtagaggcatgcgcactgaccaaatcttgtt-tccctgaaaatcgaactcggtatt 2784932  T
Q  367 cctcagata 375  Q
    |||| ||||    
T  2784931 cctcggata 2784923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 341
Target Start/End: Complemental strand, 29802870 - 29802834
Alignment:
Q  305 tcgtgtgtagaggcatgcgcactggccaaacgttgtt 341  Q
    ||||||||||||||||| |||||||||||||||||||    
T  29802870 tcgtgtgtagaggcatgtgcactggccaaacgttgtt 29802834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 368
Target Start/End: Original strand, 33634448 - 33634548
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    ||||| ||| ||||||| ||| || ||| ||| ||||||||| | || ||||||||||||||| ||||||| || || |||| |||||||||| ||||||    
T  33634448 ggttttcgatccaccaaaggtagatgactaattcggctcgtgcgcagcggcatgcgcactggctaaacgttatttcctctgggaatcgaacccggtattc 33634547  T
Q  368 c 368  Q
    |    
T  33634548 c 33634548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 390
Target Start/End: Complemental strand, 41187763 - 41187684
Alignment:
Q  311 gtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggag 390  Q
    |||||||||||  |||||| |||  ||||||||||||   |||||||||| |||||| ||||||| || |||||||||||    
T  41187763 gtagaggcatggacactggtcaagtgttgttccccctcataatcgaacccggtattcttcagatacgtccttagaaggag 41187684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 360
Target Start/End: Original strand, 43303330 - 43303393
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    ||||| |||||||  |||||||||||| ||||| ||| ||||||||||| || |||||||||||    
T  43303330 aatccagctcgtgcatagaggcatgcgtactggtcaagcgttgttccccttgaaaatcgaaccc 43303393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 389
Target Start/End: Original strand, 34738341 - 34738454
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||| |||| ||||||||||| |||||| |||||| ||||||||||         |||| |||||||| || ||| ||||||| ||||||||    
T  34738341 cggtttccgacctaccattggtggacgactaatccgactcgtgcgtagaggcat---------ccaagcgttgttctccatgggaatcgaatccagtatt 34738431  T
Q  367 cctcagatatgttcttagaagga 389  Q
    |||| |||| || ||| ||||||    
T  34738432 cctcggatacgtccttggaagga 34738454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 368
Target Start/End: Original strand, 18649034 - 18649135
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||| |||||||||  |||  |||| |||||| ||| || |||||||||||||||||| |||||  ||||||| ||||  ||||||| || |||||    
T  18649034 cggtttccaacccaccaaaagtgagcgactaatccgactcatgcgtagaggcatgcgcactgcccaaatattgttcctcctgagaatcgaatccggtatt 18649133  T
Q  367 cc 368  Q
    ||    
T  18649134 cc 18649135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 33005852 - 33005771
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttcccc 345  Q
    |||||||||||||||||| || ||||  |||  |||| | ||| || |||||||||||||||||||||||  ||||||||||    
T  33005852 catcggtttccgacccactaaaggtgagcgattaatctgcctcatgcgtagaggcatgcgcactggccaagtgttgttcccc 33005771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 36480453 - 36480506
Alignment:
Q  275 cgacccaccaatggtggacgacaatccggctcgtgtgtagaggcatgcgcactggc 330  Q
    ||||||| ||| ||||||||||  |||||||| || ||||||||||||||||||||    
T  36480453 cgacccatcaaaggtggacgac--tccggctcatgcgtagaggcatgcgcactggc 36480506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 9945 - 9838
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    |||||| |||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||    
T  9945 ggtttctgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaatccggtattc 9846  T
Q  368 ctcagata 375  Q
    ||||||||    
T  9845 ctcagata 9838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 42086426 - 42086276
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| |||||||||| |||||||||| || ||||||||||||||||||| ||| ||||||||||||||| |||||||||| |||||    
T  42086426 cggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacccggtatt 42086327  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |||| | || || ||| ||||||| |  |||||||  ||||||||||||||    
T  42086326 cctcgggtacgtccttggaaggagctccttgccaccggagcccaagcaact 42086276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 269 - 417
Target Start/End: Complemental strand, 19572822 - 19572673
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    ||||||| |||||||||||||| ||||| |||||||||| || |||||||||||||||||||||||  |||||||||||||| |||| ||||| ||||||    
T  19572822 ggtttccaacccaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatctaacccggtattc 19572723  T
Q  368 ctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    | | |||| || ||| ||||||| |  |||||||| ||||||||||||||    
T  19572722 cccggatacgtccttggaaggagctccttgccactggagcccaagcaact 19572673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 1538530 - 1538380
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||||||||||||||||  |||||||||| || |||||||||||||||||||||||  |||||||||||||| |||||||||| |||||    
T  1538530 cggtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtatt 1538431  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || |  ||| || ||  ||||||| |  |||||||| |||||||| |||||    
T  1538430 ccccgaatacgtcctcggaaggagctccttgccactggagcccaaacaact 1538380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 270 - 367
Target Start/End: Complemental strand, 9805101 - 9805003
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    |||||||||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  9805101 gtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattc 9805003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 269 - 410
Target Start/End: Original strand, 4016264 - 4016406
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    ||||||||||||||||||||||  | || |||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||  ||||     
T  4016264 ggtttccgacccaccaatggtgagcaactaatccggctcgtgtgtagaggcatgcgcactggccaagtgttgttccccctgataatcgaacccgatattt 4016363  T
Q  368 ctcagatatgttcttagaaggagtttattgccactagagccca 410  Q
    ||||| || || ||| ||| ||| || |||||||| |||||||    
T  4016364 ctcaggtacgtccttggaatgagcttcttgccactggagccca 4016406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 270 - 375
Target Start/End: Complemental strand, 23383754 - 23383648
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||||||||||||||| |||||||||| ||||| |||| || ||||||||| ||||||||||||| ||||||||||||||| |||||||||| |||||||    
T  23383754 gtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaacccggtattcc 23383655  T
Q  369 tcagata 375  Q
    || ||||    
T  23383654 tctgata 23383648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 389
Target Start/End: Complemental strand, 12082004 - 12081885
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcct 369  Q
    |||||||| |||||| |||||||||| ||| ||||||||| ||||| ||||||||||||||||| ||||||||||||||  ||||||||||||||||||     
T  12082004 tttccgactcaccaaaggtggacgactaattcggctcgtgcgtagatgcatgcgcactggccaagcgttgttccccctgagaatcgaacccagtattccc 12081905  T
Q  370 cagatatgttcttagaagga 389  Q
    | |||| || ||| ||||||    
T  12081904 cggatacgtcctttgaagga 12081885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 20682625 - 20682776
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||| |||||| || ||||| |||  ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||    
T  20682625 cggtttccaacccactaaaggtggtcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatctaacccaatatt 20682724  T
Q  367 cctcagatatgttcttagaa-ggagtttattgccactagagcccaagcaact 417  Q
    || | | || || ||||||| |||| |  ||| |||| ||||||||||||||    
T  20682725 ccccgggtacgtccttagaatggagctccttgtcactggagcccaagcaact 20682776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 5731928 - 5732078
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||| || |||| ||||| |||| ||||| |  ||||||||||||||||||||||| ||||||||| ||||| |||||||||| |||||    
T  5731928 cggtttccgacccactaaaggtgaacgactaatctggctcatacgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtatt 5732027  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | || || ||| ||||||| |  |||||||| ||||||||||||||    
T  5732028 ccccgggtacgtccttggaaggagctccttgccactggagcccaagcaact 5732078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 8513618 - 8513468
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| |||||||||| |||| |||||||| ||||||||||| ||||||||||| | ||||| ||||| | |||||||||| |||||    
T  8513618 cggtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcatgtgcactggccaagcattgtttcccctaggaatcgaacccggtatt 8513519  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | || || ||| ||||||| |  |||||||| ||| ||||||||||    
T  8513518 ccccgggtacgtccttggaaggagctccttgccacttgagtccaagcaact 8513468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 18136284 - 18136438
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-----aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccag 362  Q
    |||||||||||||||||||||||||||||     |||||||||| ||||||||||||||| ||||| ||||  |||||||||||||| |||||||||| |    
T  18136284 cggtttccgacccaccaatggtggacgactaattaatccggctcatgtgtagaggcatgcacactgaccaagtgttgttccccctgggaatcgaacccgg 18136383  T
Q  363 tattcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |||||  | |||| ||  || ||||||| |  |||||||| |||||||| |||||    
T  18136384 tattctccggatacgtctttggaaggagctccttgccactggagcccaaacaact 18136438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 20525937 - 20525787
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||| |||||||||||||||||| |||||||||| || |||||||||||||||||||| ||  |||||||| ||||| ||||||||||  ||||    
T  20525937 cggtttccgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggcgaagtgttgttccacctgggaatcgaacccgatatt 20525838  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | ||||  | |||  |||||| |  |||||||| ||||||||||||||    
T  20525837 ccccggatacatccttgaaaggagctccttgccactggagcccaagcaact 20525787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 268 - 368
Target Start/End: Original strand, 25417191 - 25417292
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||| ||||||||||||||  | ||| ||||||||||||  ||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||    
T  25417191 cggtttctgacccaccaatggtaaatgactaatccggctcgttcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtatt 25417290  T
Q  367 cc 368  Q
    ||    
T  25417291 cc 25417292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 269 - 368
Target Start/End: Original strand, 38897728 - 38897827
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    ||||||||| ||||||| ||||| | || ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||    
T  38897728 ggtttccgatccaccaaaggtgggcaactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt-cccctggaaatcgaacccggtattc 38897826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 270 - 417
Target Start/End: Original strand, 41163470 - 41163617
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||||||||||| || |||||||||| ||||| |||| || |||||| |||| ||||||||||||||||||| ||||||| |||||||||| |||||||    
T  41163470 gtttccgacccacaaaaggtggacgactaatccagctcatgcgtagagacatgtgcactggccaaacgttgtt-cccctgggaatcgaacccggtattcc 41163568  T
Q  369 tcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     | | || |||||| ||||||| |  |||||||| |||||||| |||||    
T  41163569 ccgggtacgttcttggaaggagctccttgccactggagcccaaacaact 41163617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 277 - 417
Target Start/End: Complemental strand, 7866671 - 7866530
Alignment:
Q  277 acccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagata 375  Q
    ||||||||| ||||| |||| ||||||| ||||| |||||||||||| |||||||||| ||||||||| ||| | |||||||||| ||||||||| | ||    
T  7866671 acccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaacccggtattcctcgggta 7866572  T
Q  376 tgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     || ||| ||||||| |  |||||||| ||| ||||||||||    
T  7866571 cgtccttggaaggagctccttgccactggagtccaagcaact 7866530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 367
Target Start/End: Original strand, 42291513 - 42291613
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||| ||| ||| |||||||||| ||||||||||||| ||||||||||| ||||||||||| |||||||| |||||| |||| ||||| |||||    
T  42291513 cggtttccgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttcaccctgggaatcaaacccggtatt 42291612  T
Q  367 c 367  Q
    |    
T  42291613 c 42291613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 411
Target Start/End: Original strand, 42861226 - 42861370
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||| |||||||||||||||||||||||  |||||||||| || |||||||||||||||||||||||  |||||| |||  |||||| ||||||  ||||    
T  42861226 cggtctccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttccctgggaaattgaacccgatatt 42861325  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaa 411  Q
    || | ||||||| ||| ||| ||| |  |||||||| ||||||||    
T  42861326 ccccggatatgtccttggaatgagctccttgccactggagcccaa 42861370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 371
Target Start/End: Complemental strand, 21149836 - 21149729
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||| | | ||||||||||||| |||| |||||  |||||| |||||| |||||||||||| |||||||||||||||||| ||||||||||  ||    
T  21149836 catcggttttctatccaccaatggtgggcgactaatccaactcgtgcgtagagtcatgcgcactggtcaaacgttgttccccctgaaaatcgaacctggt 21149737  T
Q  364 attcctca 371  Q
    ||||||||    
T  21149736 attcctca 21149729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 37263339 - 37263190
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||| |||  || |||||||||| ||||||||||||| ||||||||||||||| ||||||| ||||||| ||||||  ||||||||||  ||||    
T  37263339 cggtttccgatccaataaaggtggacgactaatccggctcgtgcgtagaggcatgcgcattggccaagcgttgtt-cccctgagaatcgaacccgatatt 37263241  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | || || ||||||||||  |  |||||||| ||||||||||||||    
T  37263240 ccccgggtacgtccttagaaggaactccttgccactggagcccaagcaact 37263190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 357
Target Start/End: Complemental strand, 40117514 - 40117424
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaa 357  Q
    |||||| ||| ||||||| |||| ||||  |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||    
T  40117514 cggttttcgatccaccaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaa 40117424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 417
Target Start/End: Complemental strand, 28857194 - 28857077
Alignment:
Q  300 ccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgcc 399  Q
    ||||||| || |||||||||||||||||||||||  |||||||||||||| |||||||||| ||||||| | | |  || ||| ||||||| |  |||||    
T  28857194 ccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgcc 28857095  T
Q  400 actagagcccaagcaact 417  Q
    ||| ||||||||||||||    
T  28857094 actggagcccaagcaact 28857077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 297 - 417
Target Start/End: Original strand, 7308402 - 7308522
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttatt 396  Q
    |||||||||| || ||||||||||| |||||| |||| ||||||||||||||| ||||||||||  ||||||||| ||| || ||| ||| ||| |  ||    
T  7308402 aatccggctcatgcgtagaggcatgtgcactgcccaagcgttgttccccctgggaatcgaacccgatattcctcaaatacgtccttggaatgagctcctt 7308501  T
Q  397 gccactagagcccaagcaact 417  Q
    ||||||||| ||||| |||||    
T  7308502 gccactagaacccaaacaact 7308522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 368
Target Start/End: Original strand, 18262656 - 18262727
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||||||||||||||||||| ||||||||||| ||| |||||||||||||| |||| |||||| |||||||    
T  18262656 aatccggctcgtgtgtagaggtatgcgcactggtcaagcgttgttccccctgaaaatagaacccggtattcc 18262727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 405
Target Start/End: Original strand, 11845853 - 11845947
Alignment:
Q  311 gtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgccactaga 405  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||  |||| ||| | || || ||| ||||||| |  |||||||||||    
T  11845853 gtagaggcatgcgcactggccaaacgttgttccccctcgaaatcgaacccgatatttctcgggtacgtccttggaaggagctccttgccactaga 11845947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 30349678 - 30349528
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||| |||||| | |||||||||| ||| | |||| ||  |||||||||||||||||||||| | ||||||||||| |||||| ||||| |||||    
T  30349678 cggtttccggcccacctaaggtggacgactaattcagctcatgcatagaggcatgcgcactggccaatcattgttccccctagaaatcaaacccggtatt 30349579  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||| || ||| ||||||  |  |||||||| |||||||| |||||    
T  30349578 ccccggatacgtccttggaaggaactccttgccactggagcccaaacaact 30349528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 348
Target Start/End: Original strand, 39099787 - 39099868
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctg 348  Q
    |||||||||||||||||| ||||| |||| |||||||||| || ||||||||||| |||||||||||  |||||||||||||    
T  39099787 cggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgttccccctg 39099868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 348
Target Start/End: Complemental strand, 43399227 - 43399146
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctg 348  Q
    |||||||||||| |||||  ||||||||| ||||| ||||||| ||||||||||||||||||||||| |||| |||||||||    
T  43399227 cggtttccgaccaaccaaatgtggacgactaatcctgctcgtgcgtagaggcatgcgcactggccaagcgttattccccctg 43399146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 375
Target Start/End: Original strand, 14588637 - 14588733
Alignment:
Q  280 caccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagata 375  Q
    |||||| |||||||||| |||||||||| || ||||||||||||||||||| ||| |||| |||| |||| |||||||||||  |||||| ||||||    
T  14588637 caccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttattcctcctgaaaatcgaacccgatattccccagata 14588733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 417
Target Start/End: Complemental strand, 26077210 - 26077090
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttatt 396  Q
    |||| |||||||| ||||||||||| ||||||||||| |||||||||| |||| ||||||||| |||||||| || ||| || ||| ||| ||| |  ||    
T  26077210 aatctggctcgtgcgtagaggcatgtgcactggccaagcgttgttccctctgggaatcgaacctagtattccccaaatacgtccttggaatgagctcctt 26077111  T
Q  397 gccactagagcccaagcaact 417  Q
     ||||| |||||||| |||||    
T  26077110 accactggagcccaaacaact 26077090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 417
Target Start/End: Complemental strand, 30995190 - 30995070
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttatt 396  Q
    ||||||||||||| |||||||||||||| ||||||||  |||||||||||||| |||||||||  ||||||| ||  || || ||| ||||||| |  ||    
T  30995190 aatccggctcgtgcgtagaggcatgcgccctggccaagtgttgttccccctgggaatcgaacctggtattccccatgtacgtccttggaaggagctcctt 30995091  T
Q  397 gccactagagcccaagcaact 417  Q
    ||||||| | |||| ||||||    
T  30995090 gccactaaaacccaggcaact 30995070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 265 - 368
Target Start/End: Complemental strand, 18045740 - 18045637
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgacaatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagta 364  Q
    ||||||||||||| |||| || |||||||||  |  |||||| |||||||||||||||| ||   ||||  |||||||||||||| ||||||||||||||    
T  18045740 catcggtttccgatccactaaaggtggacgattaatcggctcatgtgtagaggcatgcgtaccaaccaagggttgttccccctgggaatcgaacccagta 18045641  T
Q  365 ttcc 368  Q
    ||||    
T  18045640 ttcc 18045637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 347
Target Start/End: Complemental strand, 24875441 - 24875364
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccct 347  Q
    ||||||||||| ||| |||||||||  ||||||||||||| |||||| |||||||||||| |||||||||||| ||||    
T  24875441 tttccgacccatcaaaggtggacgattaatccggctcgtgcgtagagacatgcgcactggtcaaacgttgttctccct 24875364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 390
Target Start/End: Complemental strand, 25467479 - 25467386
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggag 390  Q
    ||||| ||||||| ||||||||||||| ||||||||| ||||||||| |||| |||||||| | |||||||||   ||| || |||||||||||    
T  25467479 aatccagctcgtgcgtagaggcatgcgtactggccaatcgttgttcctcctgaaaatcgaatctagtattccttgtatacgtccttagaaggag 25467386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 390
Target Start/End: Original strand, 35245044 - 35245137
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggag 390  Q
    |||| ||||| || ||||| |||||| |||||| |||||||||||||| ||| |||| |||| || |||||||| ||||||| |||||||||||    
T  35245044 aatcaggctcatgcgtagaagcatgcacactggtcaaacgttgttccctctgaaaattgaactcaatattcctcggatatgtccttagaaggag 35245137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 390
Target Start/End: Complemental strand, 5079419 - 5079307
Alignment:
Q  279 ccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatg 377  Q
    ||||||| ||||| |||| ||||||||||||| ||||| ||||||||| || |||| || ||||||||||||||||| | ||| ||||||| | |||| |    
T  5079419 ccaccaaaggtgggcgactaatccggctcgtgcgtagaagcatgcgcattgaccaagcgctgttccccctggaaatcaaccccggtattccacggatacg 5079320  T
Q  378 ttcttagaaggag 390  Q
    | ||| |||||||    
T  5079319 tgcttggaaggag 5079307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 359
Target Start/End: Original strand, 24463894 - 24463986
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacc 359  Q
    |||||| |||||||  || ||||| |||| |||||||||||||  |||||||||||||||||||||| |||||||| || || ||||||||||    
T  24463894 cggttttcgacccagtaaaggtgggcgactaatccggctcgtgcatagaggcatgcgcactggccaatcgttgttcgccttgaaaatcgaacc 24463986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 360
Target Start/End: Original strand, 24653817 - 24653912
Alignment:
Q  265 catcggtttccgacccaccaatggtggacga-caatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    ||||||||| |||||||||||||||||||||  |||||||||  || ||||||| |||||||||| ||||  ||||||| ||||| |||||||||||    
T  24653817 catcggttttcgacccaccaatggtggacgattaatccggct-atgcgtagaggtatgcgcactgaccaagtgttgttctccctgaaaatcgaaccc 24653912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 368
Target Start/End: Complemental strand, 1899050 - 1898999
Alignment:
Q  317 gcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| |||||||    
T  1899050 gcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattcc 1898999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 3653922 - 3653997
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttc 342  Q
    |||||| ||| ||||||| |||||||||| |||||| |||||| ||||||||||||||||||| ||| ||||||||    
T  3653922 cggttttcgatccaccaaaggtggacgactaatccgcctcgtgcgtagaggcatgcgcactggtcaagcgttgttc 3653997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 390
Target Start/End: Complemental strand, 13664359 - 13664236
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||| |||||| ||||  |||  |||| ||||| || |||||||||||||||||||||||  |||||||||||||  ||||||| || |||||    
T  13664359 cggtttccgacacaccaaaggtgatcgattaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgataatcgaatccggtatt 13664260  T
Q  367 cctcagatatgttcttagaaggag 390  Q
    ||  ||||| || ||| |||||||    
T  13664259 ccctagatacgtccttggaaggag 13664236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 14974343 - 14974410
Alignment:
Q  279 ccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttcccc 345  Q
    ||||||| |||||||||| |||||||||| || ||||||||||| |||||||||||| ||||||||||    
T  14974343 ccaccaaaggtggacgactaatccggctcatgcgtagaggcatgtgcactggccaaatgttgttcccc 14974410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 32874884 - 32874798
Alignment:
Q  270 gtttccgacccaccaatggtggacga-caatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcg 355  Q
    ||||||||||||||||||||||||||  ||| ||||||||| ||| ||| ||||||||| | ||| ||||||||||| || ||||||    
T  32874884 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactagtcaagcgttgttccccttgaaaatcg 32874798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 9168268 - 9168337
Alignment:
Q  275 cgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttcc 343  Q
    |||||||| || |||||||||| |||||||||| || ||||||| ||||||||||||||| |||||||||    
T  9168268 cgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactggccaagcgttgttcc 9168337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 358
Target Start/End: Complemental strand, 21487713 - 21487625
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaac 358  Q
    |||||| |||||||  || ||||| |||| |||||||||||||   ||||||||||||||| ||||||||||||||| |||| |||||||||    
T  21487713 cggttttcgacccattaaaggtgggcgactaatccggctcgtg---agaggcatgcgcactagccaaacgttgttcctcctgaaaatcgaac 21487625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 375
Target Start/End: Complemental strand, 41801073 - 41800968
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcct 369  Q
    ||||||||||| ||| | || ||||| ||||||||||||| |||||| |||||||| ||| ||| ||||||||||| ||  ||||||||||  ||||||     
T  41801073 tttccgacccatcaaagatgaacgactaatccggctcgtgcgtagagacatgcgcattggtcaagcgttgttccccttgagaatcgaacccgatattccc 41800974  T
Q  370 cagata 375  Q
    ||||||    
T  41800973 cagata 41800968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 368
Target Start/End: Complemental strand, 15034177 - 15034073
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||||||| ||| ||| ||||||| || |||| ||||| || |||||||||||| ||||| ||||  |||||| ||| ||||||| |||||| ||    
T  15034177 catcggtttccgatccatcaaaggtggacaactaatcaggctcatgcgtagaggcatgcacactgaccaagtgttgtttcccatggaaattgaacccggt 15034078  T
Q  364 attcc 368  Q
    |||||    
T  15034077 attcc 15034073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 411
Target Start/End: Original strand, 38297024 - 38297116
Alignment:
Q  319 atgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgccactagagcccaa 411  Q
    |||||||||| |||||||||||||||| ||| ||| |||||| ||||||||||  ||  | ||||||||||| |  |||||||| ||||||||    
T  38297024 atgcgcactgaccaaacgttgttccccttgggaattgaacccggtattcctcaagtacatccttagaaggagctccttgccactggagcccaa 38297116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 14728182 - 14728031
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgt-tccccctggaaatcgaacccagtat 365  Q
    |||||||||||||| ||| ||||  | || |||||||||| || |||||||||||||||||| |||| ||||||  ||||||| |||||||| || ||||    
T  14728182 cggtttccgacccatcaaaggtgagcaactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgtccccccctgaaaatcgaatccggtat 14728083  T
Q  366 tcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    | | || | |||  ||| ||| ||| | ||||||||| |||||||| |||||    
T  14728082 ttcccaaaaatgaccttggaatgagctcattgccactggagcccaaacaact 14728031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 367
Target Start/End: Original strand, 18294493 - 18294591
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    ||||||||||||||||| | ||| |||  ||||||| || |||||||||| |||||||||| |||| ||||||| |||||||| || |||||| ||||||    
T  18294493 ggtttccgacccaccaaagatgggcgattaatccggttcatgtgtagaggtatgcgcactgaccaagcgttgtt-cccctggatattgaacccggtattc 18294591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 417
Target Start/End: Original strand, 35561829 - 35561976
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcct 369  Q
    ||||||||| ||||| ||||  |||| |||| ||||| |||||||||||||||||||||| ||   ||||||||| |||||| |||||| |  ||||||     
T  35561829 tttccgacctaccaacggtgagcgactaatctggctcatgtgtagaggcatgcgcactggtcaggtgttgttccctctggaagtcgaactcgatattccc 35561928  T
Q  370 cagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    | |||| ||  || ||||||| |  |||||||| ||| ||||||||||    
T  35561929 cggatacgtcattggaaggagctctttgccactggagtccaagcaact 35561976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 344
Target Start/End: Original strand, 43212511 - 43212590
Alignment:
Q  266 atcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccc 344  Q
    ||||||||| ||||||| ||||||| ||||| |||||  ||| |||| ||||||||||| | ||||||||||||||||||    
T  43212511 atcggtttctgacccacaaatggtgaacgactaatccaactcatgtgcagaggcatgcgtattggccaaacgttgttccc 43212590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 375
Target Start/End: Complemental strand, 7336689 - 7336611
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagata 375  Q
    ||||||||||||| ||||||||||||||||||   || |||||||| || | ||||||||||||  |||||||| ||||    
T  7336689 aatccggctcgtgcgtagaggcatgcgcactgataaagcgttgttctccttagaaatcgaacccgatattcctcggata 7336611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 12766230 - 12766080
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||| |||||||||| ||||| |||| |||| || || || |||||||||||| |||||||||| | ||||||| |||   |||||||||| |||||    
T  12766230 cggtttctgacccaccaaaggtgggcgactaatctggttcatgcgtagaggcatgcacactggccaagcattgttcctcctcagaatcgaacccggtatt 12766131  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | || || ||| ||||||| |  |||||||| ||| |||| |||||    
T  12766130 ccccgggtacgtccttggaaggagctccttgccactcgagtccaaacaact 12766080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 345
Target Start/End: Complemental strand, 20590098 - 20590020
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttcccc 345  Q
    |||||||||| || ||||| |||||| || ||| |||||| || |||||| |||||||||||||||| |||||||||||    
T  20590098 cggtttccgatcctccaatagtggacaactaatacggctcatgcgtagagtcatgcgcactggccaagcgttgttcccc 20590020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 20255466 - 20255393
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttc 342  Q
    ||||||||| |||||| |||||||||| |||||| ||| || ||||||||||||||||||| |||  |||||||    
T  20255466 gtttccgactcaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactggtcaagtgttgttc 20255393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 265 - 357
Target Start/End: Complemental strand, 31890192 - 31890099
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaa 357  Q
    ||||||||| ||| |||  || |||||||||| ||| | ||| |||| |||||||||| ||||||| ||||||||||||| ||| |||||||||    
T  31890192 catcggttttcgatccattaaaggtggacgactaattcagcttgtgtatagaggcatgtgcactggtcaaacgttgttcctcctagaaatcgaa 31890099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 40060344 - 40060295
Alignment:
Q  318 catgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    ||||||||||||||||  ||||||||||||| ||||||||||| ||||||    
T  40060344 catgcgcactggccaagtgttgttccccctgaaaatcgaacccggtattc 40060295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 368
Target Start/End: Complemental strand, 2485298 - 2485195
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||||||||||| ||| ||||  |||| |||||| ||| |  |||||||||||||||| |||| |  |||||| ||||| | |||||||||||||    
T  2485298 catcggtttccgacccatcaaaggtgagcgactaatccgactcatacgtagaggcatgcgcacaggcccagggttgtt-cccctaggaatcgaacccagt 2485200  T
Q  364 attcc 368  Q
    |||||    
T  2485199 attcc 2485195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 6764495 - 6764539
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgtt 341  Q
    ||||||||||||| ||||||||||||||||| ||||||| |||||    
T  6764495 aatccggctcgtgcgtagaggcatgcgcactagccaaacattgtt 6764539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 25452994 - 25452946
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttcccc 345  Q
    ||||||||||||| |||||||||||| |||||| ||||| |||||||||    
T  25452994 aatccggctcgtgcgtagaggcatgcacactggtcaaacattgttcccc 25452946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 370
Target Start/End: Original strand, 35813025 - 35813109
Alignment:
Q  287 ggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctc 370  Q
    |||||||||| |||||| ||| ||||||||| |||||||||||| ||| | || || ||||| | |||||||||| |||||||||    
T  35813025 ggtggacgactaatccgactcatgtgtagagacatgcgcactggtcaagcattatttcccctaggaatcgaacccggtattcctc 35813109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 38369768 - 38369720
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttcccc 345  Q
    |||||| |||||| |||||||||||||||||||||||  ||||||||||    
T  38369768 aatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttcccc 38369720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 16755109 - 16755059
Alignment:
Q  318 catgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||||||||||||||  |||||| | |||| |||||||||||||||||||    
T  16755109 catgcgcactggccaagtgttgtttctcctgaaaatcgaacccagtattcc 16755059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 366
Target Start/End: Complemental strand, 20228819 - 20228717
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    |||||||||| || ||||||| | ||| |||| |||| | ||||||||||||||||| |||||| ||||| | ||||| ||| | | |||||||||| ||    
T  20228819 catcggtttctgatccaccaaagatgggcgactaatctgactcgtgtgtagaggcatacgcactagccaagcattgtttcccttaggaatcgaaccctgt 20228720  T
Q  364 att 366  Q
    |||    
T  20228719 att 20228717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 353
Target Start/End: Complemental strand, 20705618 - 20705576
Alignment:
Q  311 gtagaggcatgcgcactggccaaacgttgttccccctggaaat 353  Q
    |||||||||||||||||| ||||||||||||| ||||| ||||    
T  20705618 gtagaggcatgcgcactgaccaaacgttgttctccctgaaaat 20705576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 23247378 - 23247452
Alignment:
Q  287 ggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||||||||| |||| |||||||| ||||||||||||  ||||  ||| ||||||||| ||||| ||||||||||    
T  23247378 ggtggacgactaatctggctcgtgcgtagaggcatgcatactgatcaagcgttgttcctcctgggaatcgaaccc 23247452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 367
Target Start/End: Original strand, 35006773 - 35006843
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    |||| |||||||| |||||||||||| ||||| |||| |||||||||| || | ||| |||||| ||||||    
T  35006773 aatctggctcgtgcgtagaggcatgcacactgaccaagcgttgttccctctcggaatggaacccggtattc 35006843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 357
Target Start/End: Original strand, 35638061 - 35638131
Alignment:
Q  288 gtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaa 357  Q
    ||||||||| |||| | |||||| ||||||| |||| ||||| |||||||||||||| |||| ||||||||    
T  35638061 gtggacgactaatctgactcgtgcgtagaggtatgcacactgaccaaacgttgttcctcctgaaaatcgaa 35638131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 366
Target Start/End: Original strand, 35403558 - 35403619
Alignment:
Q  305 tcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||| |||||| |||||||| ||||||| |||||||||||||   |||||||||| |||||    
T  35403558 tcgtgcgtagagacatgcgcattggccaagcgttgttcccccttagaatcgaacccggtatt 35403619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 345
Target Start/End: Complemental strand, 7617017 - 7616941
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttcccc 345  Q
    |||||||| ||||||||  |||||||| |||| | ||| || ||||||||||||  ||||| |||||||||||||||    
T  7617017 gtttccgatccaccaataatggacgactaatctgactcatgcgtagaggcatgcatactggtcaaacgttgttcccc 7616941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 344
Target Start/End: Complemental strand, 21375449 - 21375373
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccc 344  Q
    ||||||||| ||| ||| | |||||||| |||||| ||| || ||||| ||||||||||||| |||| |||||||||    
T  21375449 ggtttccgatccatcaaagatggacgactaatccgactcatgcgtagaagcatgcgcactggtcaaatgttgttccc 21375373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 2e-34; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 41663865 - 41664015
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||||||||||||||||| ||||| |||| || |||||||||||||||||| ||||  |||||||||||||| |||||||||| |||||    
T  41663865 cggtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtatt 41663964  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||| || ||||||||||| |  |||||||| |||||||| |||||    
T  41663965 ccccggatacgtccttagaaggagctccttgccactggagcccaaacaact 41664015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 49078213 - 49078063
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||| |||||||||| ||||| |||||||||| || |||||||||||||||||||||||  |||||| ||||||| |||||||||| |||||    
T  49078213 cggtttccgacctaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtatt 49078114  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||| || ||||||||||| |  |||||||| ||||||||||||||    
T  49078113 ccccggatacgtccttagaaggagctccttgccactggagcccaagcaact 49078063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 270 - 366
Target Start/End: Original strand, 17642015 - 17642112
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  17642015 gtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccagtatt 17642112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 8764090 - 8763940
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||  |||||||||||||| || |||||||  ||||    
T  8764090 cggtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaaacgaacccgatatt 8763991  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | || || ||| ||||||| |  |||||||  ||||||||||||||    
T  8763990 ccccgggtacgtccttggaaggagctccttgccacgggagcccaagcaact 8763940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 26325911 - 26325761
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||| ||||  ||||||||| |||| ||||||||||  ||||    
T  26325911 cggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttcccgctgggaatcgaacccgatatt 26325812  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |||| |||| || |||  |||||| |  |||||||| |||||| |||||||    
T  26325811 cctcggatacgtccttgaaaggagctccttgccactggagccctagcaact 26325761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 269 - 417
Target Start/End: Original strand, 40288487 - 40288636
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    ||||||||||||||||| | ||  |||| ||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||| ||||||    
T  40288487 ggtttccgacccaccaaggatgagcgactaatccggctcgtgtgtagaggcatgcatactggccaaccgttgttccccctggaaatcgaacccggtattc 40288586  T
Q  368 ctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    | |  ||| || ||| ||| ||| |  |||||||| ||||||||||||||    
T  40288587 cccgaatacgtccttggaaagagctccttgccactcgagcccaagcaact 40288636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 265 - 417
Target Start/End: Complemental strand, 5855624 - 5855471
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    |||||||||||||||||| || |||| ||||| |||||| ||| || ||||||||||||||||||||||| ||||||||| ||||| |||||||||| ||    
T  5855624 catcggtttccgacccactaaaggtgaacgactaatccgcctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggt 5855525  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||| |  ||| || ||| ||||||| |  |||||||| |||||||| |||||    
T  5855524 attccccgaatacgtccttggaaggagctccttgccactggagcccaaacaact 5855471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 18708546 - 18708674
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||| | ||||| ||| ||||  |||| |||| ||||| |||||||||||||||||||| ||||| | ||| | |||||||||||||||||||||    
T  18708546 catcggttttcaacccatcaaaggtgagcgactaatctggctcatgtgtagaggcatgcgcactagccaagcattgcttcccctggaaatcgaacccagt 18708645  T
Q  364 attcctcagatatgttcttagaaggagtt 392  Q
    ||||||||| ||||||||| |||||||||    
T  18708646 attcctcaggtatgttcttggaaggagtt 18708674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 265 - 360
Target Start/End: Original strand, 50503367 - 50503463
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgacaa-tccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||||||||||||||| |||  |||||||||||||| ||||||||||    
T  50503367 catcggtttccgacccaccattggtgggcgacaaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgttccccctgggaatcgaaccc 50503463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 417
Target Start/End: Original strand, 2980943 - 2981090
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcct 369  Q
    |||||||||||| ||   |||||||| |||||| |||||| |||||||||||| ||||||||||  ||||||||| |||| ||||||||||||||||||     
T  2980943 tttccgacccactaaacatggacgactaatccgactcgtgcgtagaggcatgcacactggccaagtgttgttcccgctgggaatcgaacccagtattccc 2981042  T
Q  370 cagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    | |||| || | | ||||||| |  |||||||||||||||||||||||    
T  2981043 cggatacgtccctggaaggagctccttgccactagagcccaagcaact 2981090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 18915966 - 18915865
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||| ||||||||||||||  |||| ||||||||||||| |||||||||||| ||||||||||  |||||||||||||| |||||||||| |||||    
T  18915966 cggtttccaacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtatt 18915867  T
Q  367 cc 368  Q
    ||    
T  18915866 cc 18915865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 10422887 - 10422786
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||  ||||| |||||||||| |||||||||| || |||||||||||||||||||||||  |||||||| ||| |||||||||||| |||||    
T  10422887 cggtttccgacttaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcctcctagaaatcgaacccggtatt 10422788  T
Q  367 cc 368  Q
    ||    
T  10422787 cc 10422786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 266 - 390
Target Start/End: Complemental strand, 15466066 - 15465941
Alignment:
Q  266 atcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagta 364  Q
    |||||||||||||||||||| ||||  |||| |||| | |||||| ||||||||||| |||||| |||| |||||||||||||||||||||||||  |||    
T  15466066 atcggtttccgacccaccaaaggtgagcgaccaatcagactcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaacctggta 15465967  T
Q  365 ttcctcagatatgttcttagaaggag 390  Q
    |||| || ||| || ||| |||||||    
T  15465966 ttccccaaatacgtccttggaaggag 15465941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 360
Target Start/End: Original strand, 43959830 - 43959923
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||||||||| |||| || ||||| |||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  43959830 cggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctgggaattgaaccc 43959923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 368
Target Start/End: Original strand, 14254278 - 14254378
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    ||||||||||||| ||| |||||||||| |||||||||| || ||| ||||||||| ||||||||| |||||||||||||| ||||||||| | ||||||    
T  14254278 ggtttccgacccatcaaaggtggacgactaatccggctcatgcgtaaaggcatgcgtactggccaagcgttgttccccctgaaaatcgaactcggtattc 14254377  T
Q  368 c 368  Q
    |    
T  14254378 c 14254378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 417
Target Start/End: Original strand, 11397901 - 11398047
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcct 369  Q
    ||||||||||||||| |||||||||| |||||| ||| || |||||||||| |||| ||||||||||||||| ||||| | |||||||||| ||||||      
T  11397901 tttccgacccaccaaaggtggacgactaatccgactcatgcgtagaggcatacgcattggccaaacgttgtt-cccctcggaatcgaacccggtattctc 11397999  T
Q  370 cagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    | ||||  | ||| ||||||| |  |||||||| ||||||||||||||    
T  11398000 cggatacatccttggaaggagctccttgccactggagcccaagcaact 11398047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 417
Target Start/End: Original strand, 12036756 - 12036903
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcct 369  Q
    ||||||| ||||||| |||||||||  |||| |||||||| ||||||||||||||||||||||| | ||||||||||| | |||| ||||||||||||      
T  12036756 tttccgatccaccaaaggtggacgattaatctggctcgtgcgtagaggcatgcgcactggccaagcattgttccccctaggaatcaaacccagtattctc 12036855  T
Q  370 cagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     || || || ||| ||||||| || |||||||  |||||||| |||||    
T  12036856 taggtacgtccttggaaggagcttcttgccaccggagcccaaacaact 12036903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 390
Target Start/End: Original strand, 33004024 - 33004147
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| |||||||||| ||||||  ||| ||||||||||||| ||||||||||||||||||||||| | ||||| ||||||||||||||| ||  ||||    
T  33004024 cggttttcgacccaccattggtgggtgactaatccggctcgtgcgtagaggcatgcgcactggccaagcattgtttcccctggaaatcgaatccgatatt 33004123  T
Q  367 cctcagatatgttcttagaaggag 390  Q
    || | |||| || ||| |||||||    
T  33004124 ccccggatacgtccttggaaggag 33004147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 367
Target Start/End: Original strand, 33418125 - 33418224
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    ||||||||||| ||||| |||||||||| |||||||||||||  |||||||||||||||||||||| |||||| |||||| | ||||||| || ||||||    
T  33418125 ggtttccgaccgaccaaaggtggacgactaatccggctcgtgcatagaggcatgcgcactggccaagcgttgtcccccctaggaatcgaatccggtattc 33418224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 9659188 - 9659337
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||| ||||||||| |||||||||| |||||||||| || ||| ||||||||||||| | ||||||||||| ||||||| |||||||||| |||||    
T  9659188 cggtttccaacccaccaaaggtggacgactaatccggctcatgcgtaaaggcatgcgcactagtcaaacgttgtt-cccctgggaatcgaacccggtatt 9659286  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || |   || || ||||||| ||| |  |||||||| ||||| ||||||||    
T  9659287 ccccgagtacgtccttagaatgagctccttgccactggagcctaagcaact 9659337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 37339919 - 37339817
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgt-tccccctggaaatcgaacccagtat 365  Q
    |||||||| ||||||||| ||||| |||| ||||||||||||| || |||||||||||||||||||| ||||||  |||||||| |||||||||| ||||    
T  37339919 cggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgttgaggcatgcgcactggccaagcgttgtccccccctgggaatcgaacccggtat 37339820  T
Q  366 tcc 368  Q
    |||    
T  37339819 tcc 37339817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 10507796 - 10507715
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctgg 349  Q
    |||||||||||||||| ||||||||||| |||||||||| || ||||||| |||| |||||||||||||||||||| |||||    
T  10507796 ggtttccgacccaccagtggtggacgactaatccggctcatgcgtagaggtatgcacactggccaaacgttgttcctcctgg 10507715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 26660236 - 26660136
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| ||||| |||| |||||||||| || ||||||||||||| ||||  |||| |||||||||| |||||||||||||| |||||    
T  26660236 cggtttccgacccaccaaaggtgg-cgactaatccggctcatgcgtagaggcatgcgtactgatcaaatgttgttccccgtggaaatcgaacccggtatt 26660138  T
Q  367 cc 368  Q
    ||    
T  26660137 cc 26660136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 360
Target Start/End: Original strand, 30927736 - 30927829
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    ||||||| ||||||||||  ||||||||| |||||||||| || |||||||||||| || ||||||| |||||||||| |||||||||||||||    
T  30927736 cggtttctgacccaccaaaagtggacgactaatccggctcatgcgtagaggcatgcacattggccaagcgttgttccctctggaaatcgaaccc 30927829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 265 - 360
Target Start/End: Complemental strand, 10336618 - 10336522
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    ||||||||| ||| ||| ||| |||||||||  |||||||||| || ||||||||||||||||||| ||| |||||||||||||| |||||||||||    
T  10336618 catcggttttcgatccatcaaaggtggacgattaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaaccc 10336522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 265 - 368
Target Start/End: Complemental strand, 13262185 - 13262081
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||| ||| ||  |||||||||||||| |||||| |||||| |||||| |||||| | || ||||||||||||| ||||||||||||||||| ||    
T  13262185 catcggttttcgatccttcaatggtggacgactaatccgactcgtgcgtagagacatgcgtattgaccaaacgttgttctccctggaaatcgaacccggt 13262086  T
Q  364 attcc 368  Q
    |||||    
T  13262085 attcc 13262081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 268 - 375
Target Start/End: Complemental strand, 16263644 - 16263536
Alignment:
Q  268 cggtttccgacccaccaatggtggacgacaat-ccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||| ||| |||  ||||||||| || ||||||  || ||||||||||||||||||||||| ||||||||| |||||||||||||||  |||||    
T  16263644 cggtttccgatccatcaaaagtggacgactattccggcttatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaacctggtatt 16263545  T
Q  367 cctcagata 375  Q
    || ||||||    
T  16263544 ccccagata 16263536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 297 - 417
Target Start/End: Original strand, 18649391 - 18649511
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttatt 396  Q
    |||| |||||||  ||||||||||||||||||| ||| |||||||||||||| |||||||||||  |||||  |||||| || ||| ||||||| | |||    
T  18649391 aatctggctcgtacgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattctccagatacgtccttggaaggagctcatt 18649490  T
Q  397 gccactagagcccaagcaact 417  Q
     |||||||||  |||||||||    
T  18649491 accactagagttcaagcaact 18649511  T

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Target: chr1; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 265 - 368
Target Start/End: Original strand, 32142852 - 32142956
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||||||||||| ||| ||||  |||| ||| |||||| || ||| |||||||||||||||||||  ||||||||||||| ||||||||||| ||    
T  32142852 catcggtttccgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactggccaagtgttgttccccctgaaaatcgaacccggt 32142951  T
Q  364 attcc 368  Q
    |||||    
T  32142952 attcc 32142956  T

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Target: chr1; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 270 - 408
Target Start/End: Complemental strand, 34719873 - 34719734
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||||||||||||||| ||||  |||| |||| | |||||| ||||||||||||||||||| ||| |||| |||||  ||| ||||||||||||||||||    
T  34719873 gtttccgacccaccaaaggtgagcgactaatctgactcgtgcgtagaggcatgcgcactggtcaagcgttattcccagtgggaatcgaacccagtattcc 34719774  T
Q  369 tcagatatgttcttagaaggagtttattgccactagagcc 408  Q
     ||| || || ||| ||||||| |  |||||| |||||||    
T  34719773 ccaggtacgtccttggaaggagctccttgccattagagcc 34719734  T

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Target: chr1; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 333
Target Start/End: Original strand, 4581691 - 4581757
Alignment:
Q  268 cggtttccgacccaccaatggtggacgacaat-ccggctcgtgtgtagaggcatgcgcactggccaa 333  Q
    |||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||    
T  4581691 cggtttccgacccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcactggccaa 4581757  T

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Target: chr1; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 360
Target Start/End: Original strand, 21849214 - 21849306
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||||| |||||||||||| |||  |||| ||||||||||||| ||||||||||||||||| ||||| ||||||| ||||||| ||||||||||    
T  21849214 cggttttcgacccaccaatagtgagcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgtt-cccctgggaatcgaaccc 21849306  T

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Target: chr1; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 265 - 417
Target Start/End: Original strand, 32150928 - 32151081
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||| ||||||| ||| ||||  |||| ||| |||||| || ||| |||||||||||||| ||||| ||||||||||||||||||||||||   |    
T  32150928 catcggttttcgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactgaccaaatgttgttccccctggaaatcgaacctgat 32151027  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |||||||  | | || ||| ||||||| |  |||||||| |||||||| |||||    
T  32151028 attcctcgaaaacgtccttggaaggagctccttgccactggagcccaaacaact 32151081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 368
Target Start/End: Original strand, 45361891 - 45361992
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||| || |||| ||||| |||||||||  || |||| |||||||||||||||||| ||||||||| ||||  |||||||||| |||||    
T  45361891 cggtttccgacccactaaaggtgaacgactaatccggcttatgcgtagtggcatgcgcactggccaagcgttgttcctcctgagaatcgaacccggtatt 45361990  T
Q  367 cc 368  Q
    ||    
T  45361991 cc 45361992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 265 - 417
Target Start/End: Original strand, 46929744 - 46929896
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||| ||| ||| |||  ||||||||| |||||||||| ||||| |||||||||||| ||||||| ||||||||    |||||||||||| |  |    
T  46929744 catcggttttcgatccatcaaaagtggacgactaatccggctcatgtgtggaggcatgcgcattggccaagcgttgttcttt-tggaaatcgaactcgat 46929842  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||  |||||| ||  || ||||||| || |||||||||||||||||||||||    
T  46929843 attctccagatacgtctttggaaggagcttcttgccactagagcccaagcaact 46929896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 367
Target Start/End: Complemental strand, 2567375 - 2567275
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| | |||||| | |||| | |||||| ||||||||||||||||||||||| |||||||  ||| | ||||||||||| |||||    
T  2567375 cggtttccgacccaccaaagatggacggctaatctgactcgtgagtagaggcatgcgcactggccaagcgttgttttccccgaaaatcgaacccggtatt 2567276  T
Q  367 c 367  Q
    |    
T  2567275 c 2567275  T

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Target: chr1; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 271 - 366
Target Start/End: Original strand, 9853289 - 9853385
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||| |||||||||| |||||||||  |||| || |||||||||||||||||||||||||  |||||||||| ||||| | |||||||||| |||||    
T  9853289 tttctgacccaccaaaggtggacgattaatctggttcgtgtgtagaggcatgcgcactggtaaaacgttgtttcccctaggaatcgaacccggtatt 9853385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 16956564 - 16956484
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctg 348  Q
    ||||||||||||||||| ||||   ||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  16956564 ggtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcactggtcaaacgttgttacccctg 16956484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 41696645 - 41696756
Alignment:
Q  305 tcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgccactag 404  Q
    ||||| |||||||||| | |||||| |||  |||  |||||||||||||||||||| |||||||||||||| || ||| ||||||| | |||||||||||    
T  41696645 tcgtgcgtagaggcatacacactggtcaagtgttaatccccctggaaatcgaaccc-gtattcctcagatacgtccttggaaggagctcattgccactag 41696743  T
Q  405 agcccaagcaact 417  Q
    || | ||||||||    
T  41696744 agtctaagcaact 41696756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 271 - 366
Target Start/End: Complemental strand, 48761272 - 48761176
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||| ||||| |||||||||| ||||| ||||||| |||||||||||  ||||| |||||||||||||| | || |||||||| ||||||||    
T  48761272 tttccgaccgaccaaaggtggacgactaatccagctcgtgcgtagaggcatgtccactgaccaaacgttgttcctcttgaaaatcgaatccagtatt 48761176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 409
Target Start/End: Original strand, 48798109 - 48798221
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttatt 396  Q
    |||||||||| || ||||||||||||||||| | ||| ||||||||||||||||||||||||||  |||||| | |||| ||  || ||||||| |  ||    
T  48798109 aatccggctcatgcgtagaggcatgcgcactagtcaagcgttgttccccctggaaatcgaacccgatattccccggatacgtcattggaaggagctcctt 48798208  T
Q  397 gccactagagccc 409  Q
    |||||| ||||||    
T  48798209 gccactggagccc 48798221  T

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Target: chr1; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 268 - 358
Target Start/End: Original strand, 17092486 - 17092577
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaac 358  Q
    ||||||| || | ||||| |||||||||| ||||||||||||| |||||||||| | |||||||||| ||||||| |||||| |||||||||    
T  17092486 cggtttctgatctaccaaaggtggacgactaatccggctcgtgcgtagaggcatacacactggccaatcgttgtttcccctgaaaatcgaac 17092577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 35908855 - 35908755
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaa-cgttgttccccctggaaatcgaacccagtat 365  Q
    |||||||||||||||  |||||||||||| |||||||||| || |||||||||||||||||| |||||  ||||||||||||  |||||||| || ||||    
T  35908855 cggtttccgacccac--atggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaaagtgttgttccccctaaaaatcgaatccggtat 35908758  T
Q  366 tcc 368  Q
    |||    
T  35908757 tcc 35908755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 10172980 - 10173130
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| ||||| |||  |||||||||| || ||||||||||| ||||||||||| ||||||||    ||| ||| ||| || |||||    
T  10172980 cggtttccgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgggcactggccaagcgttgttctttatgggaattgaatccggtatt 10173079  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || |||||| || ||| |||||||    |||||||| |||||||| |||||    
T  10173080 ccccagatacgtccttggaaggagcaccttgccactggagcccaaacaact 10173130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 345
Target Start/End: Complemental strand, 50095003 - 50094925
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttcccc 345  Q
    ||||||||||||||| ||||||||||||| |||||| ||| || ||||| ||||||| ||||| |||||||||||||||    
T  50095003 cggtttccgacccactaatggtggacgactaatccgactcatgcgtagaagcatgcgtactggtcaaacgttgttcccc 50094925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 280 - 368
Target Start/End: Complemental strand, 31152803 - 31152714
Alignment:
Q  280 caccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||||| |||||||||| |||  | |||||||||||||||| |||||||| |||| |||| ||||||| ||||||||||||| |||||||    
T  31152803 caccaaaggtggacgactaatttgactcgtgtgtagaggcacgcgcactgaccaagcgttattcccccgggaaatcgaacccggtattcc 31152714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 266 - 417
Target Start/End: Complemental strand, 32972 - 32820
Alignment:
Q  266 atcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagta 364  Q
    |||||||||||| ||| |||  || |||||| ||| |||||| || ||||||||||| |||||| |||| ||||||||| ||||| ||||| ||||  ||    
T  32972 atcggtttccgatccatcaaaagtagacgactaattcggctcatgcgtagaggcatgtgcactgaccaagcgttgttcctcctgggaatcggacccgata 32873  T
Q  365 ttcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |||| | | || || ||| ||||||| | ||||||||| |||||||| |||||    
T  32872 ttcccccggtacgtccttggaaggagctcattgccactggagcccaaacaact 32820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 13266018 - 13265910
Alignment:
Q  287 ggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttaga 385  Q
    |||||||||| || ||||||| || |||||||||||||||||||| | ||||||||  |||| | |||||||||  ||||||||| |||| || ||||||    
T  13266018 ggtggacgactaacccggctcatgcgtagaggcatgcgcactggctagacgttgttttccctaggaatcgaaccaggtattcctcggatacgtccttaga 13265919  T
Q  386 aggagttta 394  Q
    | |||||||    
T  13265918 atgagttta 13265910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 359
Target Start/End: Complemental strand, 14357854 - 14357762
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacc 359  Q
    |||||||||||||| |||||||  ||||  ||||||| ||||| ||||||||||||||||||| ||||||||||| |   |||||||||||||    
T  14357854 cggtttccgacccatcaatggtaaacgattaatccggttcgtgcgtagaggcatgcgcactggtcaaacgttgtttcaattggaaatcgaacc 14357762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 366
Target Start/End: Original strand, 33498867 - 33498947
Alignment:
Q  287 ggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||| |||||||||| || ||||||||||||||||||||||| ||||| ||| ||||  |||||||||| |||||    
T  33498867 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgctcctcctgagaatcgaacccggtatt 33498947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 360
Target Start/End: Original strand, 42710144 - 42710240
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    ||||||||||||| | |||||||||||||||| ||| ||| |  || |||||||||||||||||||||||   ||||| |||||| |||||||||||    
T  42710144 catcggtttccgatctaccaatggtggacgactaattcggtttatgcgtagaggcatgcgcactggccaagtattgtttcccctgaaaatcgaaccc 42710240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 417
Target Start/End: Original strand, 47312938 - 47313057
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttatt 396  Q
    |||| ||||| || |||||||||| |||||||||||||||||||| ||||| | |||| ||||| ||||||| |||||| || ||| ||||||  |  ||    
T  47312938 aatctggctcatgcgtagaggcatacgcactggccaaacgttgtt-cccctaggaatcaaacccggtattccccagatacgtccttggaaggatctcgtt 47313036  T
Q  397 gccactagagcccaagcaact 417  Q
    |||||| |||||||| |||||    
T  47313037 gccactggagcccaaacaact 47313057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 411
Target Start/End: Original strand, 50371843 - 50371987
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||| ||||||| | ||| |||| ||||||||| ||| ||||| ||||||| ||||||||| ||||||||  |||| ||||||||| |  ||||    
T  50371843 cggtttccgatccaccaaagatgggcgactaatccggcttgtgcgtagaagcatgcgtactggccaagcgttgttcttcctgaaaatcgaacacgctatt 50371942  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaa 411  Q
      |||||||  | ||||||||||| |  |||||||| ||||||||    
T  50371943 tttcagatacatccttagaaggagctccttgccacttgagcccaa 50371987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 368
Target Start/End: Complemental strand, 34878059 - 34877988
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||| ||||||||||||||||||||||||||||||||  |||||||| ||| | |||||||||  |||||||    
T  34878059 aatctggctcgtgtgtagaggcatgcgcactggccaagtgttgttccgcctaggaatcgaacctggtattcc 34877988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 5504130 - 5503980
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||| ||| |||||||||| |||||||||| || ||||||||||| |||||   ||| |||||||  |||||  |||||||||   ||||    
T  5504130 cggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgtgcactaatcaagcgttgttttccctgagaatcgaacctgatatt 5504031  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || |||||| |||||  ||||||| |  |||||||| || ||||| |||||    
T  5504030 ccccagatacgttctcggaaggagctccttgccactggaacccaaacaact 5503980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 417
Target Start/End: Original strand, 12744529 - 12744682
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    |||| ||||| ||||||||||  |||  |||| ||| |||||| || |||||| |||||||||| | ||| |||||||||||||| |||||||| |   |    
T  12744529 catctgtttctgacccaccaacagtgagcgactaattcggctcatgcgtagagacatgcgcactagtcaagcgttgttccccctgaaaatcgaatctgat 12744628  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |||||||||||| || ||| ||||||||| | || |||| ||| |||| |||||    
T  12744629 attcctcagatacgtccttggaaggagttcaatgtcactggagtccaaacaact 12744682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 417
Target Start/End: Original strand, 12755519 - 12755672
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    |||| ||||| ||||||||||  |||  |||| ||| |||||| || |||||| |||||||||| | ||| |||||||||||||| |||||||| |   |    
T  12755519 catctgtttctgacccaccaacagtgagcgactaattcggctcatgcgtagagacatgcgcactagtcaagcgttgttccccctgaaaatcgaatctgat 12755618  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |||||||||||| || ||| ||||||||| | || |||| ||| |||| |||||    
T  12755619 attcctcagatacgtccttggaaggagttcaatgtcactggagtccaaacaact 12755672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 360
Target Start/End: Original strand, 35211181 - 35211274
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||||||||||||||||| |||||||||| ||| | |||| || ||||||||||||| | |||| || | |||||||  |||||||||||||||    
T  35211181 cggtttccgacccaccaaaggtggacgactaattcagctcatgcgtagaggcatgcgtattggctaagcattgttccttctggaaatcgaaccc 35211274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 417
Target Start/End: Original strand, 45726447 - 45726592
Alignment:
Q  273 tccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctca 371  Q
    ||||| ||||||| |||| ||||| |||||||||| || |||||| ||| ||||||||||||| ||| |||| ||||  |||||||||  |||||||||     
T  45726447 tccgatccaccaaaggtgaacgactaatccggctcatgcgtagagacatacgcactggccaaatgttattcctcctgagaatcgaaccaggtattcctcg 45726546  T
Q  372 gatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    | || || ||| || |||| |  |||| ||| ||||||||||||||    
T  45726547 ggtacgtccttggagggaggtctttgcaactggagcccaagcaact 45726592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 417
Target Start/End: Original strand, 15238153 - 15238265
Alignment:
Q  305 tcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgccactag 404  Q
    ||||| |||||||||||| || ||||||| ||||| ||||||||| ||||||||||  ||||||  || || || ||| ||||||| |  |||||| | |    
T  15238153 tcgtgcgtagaggcatgctcattggccaagcgttgctccccctgggaatcgaacccgatattccctaggtacgtccttggaaggagctccttgccattgg 15238252  T
Q  405 agcccaagcaact 417  Q
    |||||||||||||    
T  15238253 agcccaagcaact 15238265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 370
Target Start/End: Complemental strand, 31734352 - 31734285
Alignment:
Q  302 ggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctc 370  Q
    |||||||  ||||||||||||||||||||||| ||||||| ||||| | ||||||| ||||||||||||    
T  31734352 ggctcgtacgtagaggcatgcgcactggccaatcgttgtttcccctag-aatcgaatccagtattcctc 31734285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 34334353 - 34334405
Alignment:
Q  316 ggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||||||||||||||||  |||||||||||||| |||||||||| |||||||    
T  34334353 ggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattcc 34334405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 367
Target Start/End: Complemental strand, 45536763 - 45536707
Alignment:
Q  311 gtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    ||||||||||| ||||||||||| ||||||||||| | |||||||||||| ||||||    
T  45536763 gtagaggcatgtgcactggccaagcgttgttccccttagaaatcgaacccggtattc 45536707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 6563510 - 6563447
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||| |||||||| |||||| |||| ||||||||||| ||||||||||||| | ||||||||||    
T  6563510 aatctggctcgtgcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaaccc 6563447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 344
Target Start/End: Original strand, 25178583 - 25178662
Alignment:
Q  266 atcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccc 344  Q
    |||||||| |||||||| || |||| ||||| ||||||||| || |||||||| ||||||||||||||| |||| |||||    
T  25178583 atcggttttcgacccactaaaggtgaacgactaatccggcttgtctgtagaggtatgcgcactggccaagcgttattccc 25178662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 25165499 - 25165351
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||| |||||||||||| ||||   ||| ||||||||| |||  |||||||||||||||||||  |  |||||||||| ||  ||||||| || |||||    
T  25165499 cggttaccgacccaccaaaggtgagtgactaatccggcttgtgcctagaggcatgcgcactggcagagtgttgttcccc-tgataatcgaatccggtatt 25165401  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || ||| || || ||| ||||||| |  |||||||||||||||||||||||    
T  25165400 ccccaggtacgt-cttggaaggagctccttgccactagagcccaagcaact 25165351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 265 - 417
Target Start/End: Complemental strand, 34697437 - 34697284
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||||| ||||| |||  |||| |||| |||||||||| || |||||||||||| |||| |||||  ||||||||||||   |||||||||  ||    
T  34697437 catcggtttccaacccatcaaaagtgggcgactaatccggctcatgcgtagaggcatgcacactagccaagtgttgttccccctaagaatcgaacctggt 34697338  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||| |  ||| ||| || ||||||| |  ||||||| | || ||||||||||    
T  34697337 attccccgaatacgtttttggaaggagctccttgccaccaaagtccaagcaact 34697284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 341
Target Start/End: Complemental strand, 19195431 - 19195391
Alignment:
Q  301 cggctcgtgtgtagaggcatgcgcactggccaaacgttgtt 341  Q
    |||||| || |||||||||||||||||||||||||||||||    
T  19195431 cggctcatgcgtagaggcatgcgcactggccaaacgttgtt 19195391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 360
Target Start/End: Original strand, 28324619 - 28324682
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||||||||| || |||||||||||||||||| ||||  |||||| |||| || ||||||||||    
T  28324619 aatccggctcatgcgtagaggcatgcgcactgaccaagtgttgtttccccggggaatcgaaccc 28324682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 417
Target Start/End: Complemental strand, 51437517 - 51437418
Alignment:
Q  318 catgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |||||||||||| ||| ||||||||||| ||| ||||||||||  |||||||| |||| || |||  |||||| | |||| ||||  ||||||| |||||    
T  51437517 catgcgcactggtcaagcgttgttccccatgggaatcgaacccgatattcctcggatacgtccttgaaaggagctcattgtcactgaagcccaaacaact 51437418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 343
Target Start/End: Complemental strand, 42744843 - 42744801
Alignment:
Q  301 cggctcgtgtgtagaggcatgcgcactggccaaacgttgttcc 343  Q
    ||||||||| |||||||||||| |||||||||| |||||||||    
T  42744843 cggctcgtgcgtagaggcatgctcactggccaagcgttgttcc 42744801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 417
Target Start/End: Original strand, 5063866 - 5064002
Alignment:
Q  281 accaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgtt 379  Q
    ||||| ||||| |||| ||||| |||||||  ||||| ||| |||||||||||| ||||| | |||||   ||||||| ||| |||||| |||||| ||     
T  5063866 accaaaggtgggcgactaatccagctcgtgcatagagacatacgcactggccaagcgttg-tgcccctaagaatcgaatccaatattccccagatacgtc 5063964  T
Q  380 cttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||| ||||||| || ||||||| |||||| || |||||    
T  5063965 cttggaaggagcttcttgccaccagagcctaaacaact 5064002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 360
Target Start/End: Original strand, 38859125 - 38859218
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||||| ||||||| ||| ||||| |||  |||| | |||||| ||||||||||| ||| || |||||| ||||| ||||||| ||||||||||    
T  38859125 cggttttcgacccatcaaaggtgggcgattaatctgactcgtgcgtagaggcatgtgcattgaccaaacattgttacccctgggaatcgaaccc 38859218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 3e-33; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 280 - 415
Target Start/End: Complemental strand, 12606520 - 12606384
Alignment:
Q  280 caccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgt 378  Q
    |||||| ||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||| | |||| ||    
T  12606520 caccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaatctggtattccccggatacgt 12606421  T
Q  379 tcttagaaggagtttattgccactagagcccaagcaa 415  Q
    |||| ||||||| | |||||||  |||||||||||||    
T  12606420 tcttggaaggagctcattgccagcagagcccaagcaa 12606384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 3601186 - 3601036
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||  ||||||| || |||||    
T  3601186 cggtttccgacccaccaaaggtggacgactaatccggctcgtgtgtataggcatgcgcactggccaagcgttgttccccctgagaatcgaaaccggtatt 3601087  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || |  ||| ||  || ||| ||| |  |||||||||||||||||||||||    
T  3601086 ccccgaatacgtatttggaaagagctctttgccactagagcccaagcaact 3601036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 21898750 - 21898600
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||| || |||| ||||| |||||||||| || ||||||||||||||||||||||| ||||||||| ||||| |||||||||| |||||    
T  21898750 cggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtatt 21898651  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||| || ||| ||||||| |  |||||||| ||||||||||||||    
T  21898650 ccccggatacgtccttggaaggagctccttgccactggagcccaagcaact 21898600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 13036012 - 13036162
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||||||| ||||||||| |||| ||||| || |||||||||||||||||||||||  ||||||||||||| |||||||||||  ||||    
T  13036012 cggtttccgacccaccaatagtggacgactaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgaaaatcgaacccgatatt 13036111  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || |  ||| || ||| ||||||| |  |||||||| ||||||||||||||    
T  13036112 ccccgaatacgtccttggaaggagctccttgccactggagcccaagcaact 13036162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 5253231 - 5253381
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| ||||| |||  |||||||||| || |||||||||||||||||||||||  |||||||||||||| |||||||||| |||||    
T  5253231 cggtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtatt 5253330  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | || || ||| ||||||| |  |||||| | ||||||||||||||    
T  5253331 ccccgggtacgtccttggaaggagctccttgccattggagcccaagcaact 5253381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 6606105 - 6606255
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||||||||||||||||| |||||||||| || |||||||||||  ||||||||||  |||||||||||||  |||||||||| |||||    
T  6606105 cggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgtacactggccaagtgttgttccccctgagaatcgaacccggtatt 6606204  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||| || ||| ||||||| |  ||||||||   ||||||||||||    
T  6606205 ccccggatacgtccttggaaggagctccttgccactgtggcccaagcaact 6606255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 29333147 - 29333296
Alignment:
Q  268 cggtttccgacccaccaatggtggacgaca-atccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||| |||||| ||||| ||||||||||  || |||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  29333147 cggttaccgacctaccaaaggtggacgactgattcggctcatgcgtagaggcatgcgcactggccaaacgttgtt-cccctggaaatcgaacccggtatt 29333245  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||   | || || ||| ||||||| | |||||||||||||||||| |||||    
T  29333246 ccctgggtacgtccttggaaggagctcattgccactagagcccaaacaact 29333296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 270 - 417
Target Start/End: Original strand, 29444775 - 29444923
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||||||||||||||| | ||||| || |||||||||| || ||||||||||||||||||||||| ||||||||||||| |||||||||||| |||| ||    
T  29444775 gtttccgacccaccaaagatggacaactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctagaaatcgaacccggtatccc 29444874  T
Q  369 tcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     | | || ||  || ||||||| |  |||||||||||||||||| ||||    
T  29444875 ccgggtacgtctttggaaggagctccttgccactagagcccaagtaact 29444923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 13469035 - 13468885
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||| ||||||||||||||| |||| |||| |||||||| ||||||||||| |||||| |||| ||||||||||||| | ||| |||||  |||||    
T  13469035 cggtttccaacccaccaatggtgggcgactaatctggctcgtgcgtagaggcatgtgcactgaccaatcgttgttccccctaggaattgaacctggtatt 13468936  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||| || ||| ||||||| |  ||||||| |||||||||||||||    
T  13468935 ccccggatacgtccttggaaggagctccttgccaccagagcccaagcaact 13468885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 19089600 - 19089450
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| ||| |||||| ||||||||||||| |||||||||||| ||||||||||  |||||||||||||| |||| ||||  |||||    
T  19089600 cggtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcatgctcactggccaagtgttgttccccctgggaatcaaacctggtatt 19089501  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |||| |||| || |||  || ||| |  |||| ||| ||||||||||||||    
T  19089500 cctcggatacgtccttgaaatgagctccttgcgactggagcccaagcaact 19089450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 30788861 - 30788937
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttcc 343  Q
    |||||||||||||||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  30788861 cggtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcactggccaaacgttgttcc 30788937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 9633633 - 9633708
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttc 342  Q
    |||||||||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||||||||| ||||||||    
T  9633633 cggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttc 9633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 390
Target Start/End: Complemental strand, 12635916 - 12635793
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||||||| |||| |||| ||||||||| ||| ||||||||||||||||| ||||| ||||||| ||||||| |||| ||||  |||||    
T  12635916 cggtttccgacccaccaatagtgggcgactaatccggcttgtgcgtagaggcatgcgcactagccaagcgttgtttcccctgggaatcaaacctggtatt 12635817  T
Q  367 cctcagatatgttcttagaaggag 390  Q
    || | |||| || ||| |||||||    
T  12635816 ccccggatacgtccttggaaggag 12635793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 269 - 390
Target Start/End: Original strand, 34954628 - 34954750
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    ||||||||||||| ||| |||||||||| |||| ||||| || ||||||| ||| ||||||||||||||||||||||||||  |||||||||  ||||||    
T  34954628 ggtttccgacccatcaaaggtggacgactaatctggctcatgcgtagaggtatgtgcactggccaaacgttgttccccctgagaatcgaacctggtattc 34954727  T
Q  368 ctcagatatgttcttagaaggag 390  Q
    | ||| || || ||| |||||||    
T  34954728 cccaggtacgtccttggaaggag 34954750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 270 - 416
Target Start/End: Original strand, 10311479 - 10311626
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||| ||||||||||||||||  |||| ||||   |||||| |||||| |||||||||||||||| ||||||||||| ||   ||||||||| |||||||    
T  10311479 gttttcgacccaccaatggtgagcgactaatctaactcgtgcgtagagacatgcgcactggccaagcgttgttccccttgaggatcgaacccggtattcc 10311578  T
Q  369 tcagatatgttcttagaaggagtttattgccactagagcccaagcaac 416  Q
     | |||| |||||| ||||||| |  |||| ||| |||||||||||||    
T  10311579 ccggatacgttcttggaaggagctccttgctactggagcccaagcaac 10311626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 417
Target Start/End: Original strand, 2271312 - 2271459
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    |||||| |||||| ||| |||||||||| ||||||||||||| |||||| ||||||||||||| || |||||||  | |||  |||||||||| ||||||    
T  2271312 ggtttctgacccatcaaaggtggacgactaatccggctcgtgcgtagagacatgcgcactggctaagcgttgtt--ctctgagaatcgaacccggtattc 2271409  T
Q  368 ctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    | |  ||| || ||| ||||||| |  |||||||| ||||||||||||||    
T  2271410 cccgaatacgtccttggaaggagctccttgccactggagcccaagcaact 2271459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 8938813 - 8938663
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||| ||| |||||||||| ||| |||||| || ||||| || |||||||||| |||  |||||||| ||||| ||||||||| ||||||    
T  8938813 cggtttccgacccatcaaaggtggacgactaattcggctcatgcgtagatgcttgcgcactggtcaagtgttgttcctcctgggaatcgaaccaagtatt 8938714  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||||||  || ||||||| |  ||| |||| |||||||| |||||    
T  8938713 ccccggatatgtctttggaaggagctccttgtcactggagcccaaacaact 8938663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 14107366 - 14107516
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||| |||  ||| |||| |||||||||| || ||||||||||| ||||||| ||| ||||||||| ||||| |||||||||| |||||    
T  14107366 cggtttccgacccactaataatgggcgactaatccggctcatgcgtagaggcatgtgcactggtcaagcgttgttcctcctgggaatcgaacccggtatt 14107465  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || |  ||| ||  || ||||||| |  |||||||| |||||||| |||||    
T  14107466 ccccgaatacgtctttggaaggagctccttgccactggagcccaaacaact 14107516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 13584454 - 13584607
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtg--tg--tagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccag 362  Q
    |||||||||||||||||| |||||||||  |||||||||| ||  ||  |||||||||||||||||||||||||||||||  | | | |||||||||  |    
T  13584454 cggtttccgacccaccaaaggtggacgattaatccggctcatgcatgcatagaggcatgcgcactggccaaacgttgttcatcttaggaatcgaacctgg 13584553  T
Q  363 tattcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||||||   || || ||| ||| |||||| ||||||||||||| |||||||||    
T  13584554 tattcctcgagtacgtccttggaa-gagtttcttgccactagagcacaagcaact 13584607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 359
Target Start/End: Original strand, 9366461 - 9366523
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacc 359  Q
    ||||||||||||| ||||||||||||||||||||||| |||| ||||||||  ||||||||||    
T  9366461 aatccggctcgtgcgtagaggcatgcgcactggccaagcgttattccccctaaaaatcgaacc 9366523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 333
Target Start/End: Original strand, 14783428 - 14783494
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaa 333  Q
    ||||||||||||||||||||||||||||| |||||||||| || |||||||||||| |||| |||||    
T  14783428 cggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacactagccaa 14783494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 360
Target Start/End: Complemental strand, 8932763 - 8932670
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||||||||||||| ||| |||||  ||  |||||||||| || ||||||||||||||||| |||||  |||||||||||||| ||||||||||    
T  8932763 cggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaaccc 8932670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 360
Target Start/End: Complemental strand, 8944229 - 8944136
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||||||||||||| ||| |||||  ||  |||||||||| || ||||||||||||||||| |||||  |||||||||||||| ||||||||||    
T  8944229 cggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaaccc 8944136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 13391358 - 13391310
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttcccc 345  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  13391358 aatccggctcgtgcgtagaggcatgcgcactggccaaacattgttcccc 13391310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 417
Target Start/End: Original strand, 24671904 - 24672024
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttatt 396  Q
    ||||||||| ||| |||||||||||| |||||| |||  ||||||||| |||| ||| |||||| ||||||  |||||| || |||  |||||| |  ||    
T  24671904 aatccggcttgtgcgtagaggcatgcacactggtcaagtgttgttccctctgggaatagaacccggtattctccagatacgtccttgaaaggagctcctt 24672003  T
Q  397 gccactagagcccaagcaact 417  Q
    |||||| ||||||||||||||    
T  24672004 gccactggagcccaagcaact 24672024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 387
Target Start/End: Complemental strand, 33940113 - 33939993
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| ||||||  ||| | |||||||| ||||||||||||||||||||||||||||| |||  ||   ||||||| ||||  |||| |||||||||||    
T  33940113 cggttttcgacccgtcaaagatggacgactaatccggctcgtgtgtagaggcatgcgcaatggttaagtattgttcctcctgagaatcaaacccagtatt 33940014  T
Q  367 cctcagatatgttcttagaag 387  Q
    |||| |||| || ||||||||    
T  33940013 cctcggatacgtccttagaag 33939993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 367
Target Start/End: Original strand, 3587950 - 3588053
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    |||| |||||||| ||| ||| ||| |||||| ||||||| || || ||||||| ||| ||||||||||| ||||||||||| ||| |||||||||| ||    
T  3587950 catcagtttccgatccatcaaaggttgacgactaatccggttcatgcgtagaggtatgtgcactggccaagcgttgttccccttgggaatcgaacccggt 3588049  T
Q  364 attc 367  Q
    ||||    
T  3588050 attc 3588053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 366
Target Start/End: Original strand, 33859371 - 33859426
Alignment:
Q  311 gtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||||||| |||||||||||||||||  ||||||||||| |||||    
T  33859371 gtagaggcatgcgcactgggcaaacgttgttccccctaaaaatcgaacccggtatt 33859426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 368
Target Start/End: Original strand, 9179747 - 9179845
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||||| ||||||| |||||||||| ||||| |||| || ||||||| ||||  ||||| |||  |||||||||||||| |||||||||| |||||||    
T  9179747 tttccgatccaccaaaggtggacgactaatccagctcatgcgtagaggtatgcatactggtcaagtgttgttccccctgggaatcgaacccggtattcc 9179845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 360
Target Start/End: Complemental strand, 5029917 - 5029826
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||||||||||| ||| | ||| |||| |||||  ||| || |||||||||||||||||| ||||||||||||| |||||  ||||||||||    
T  5029917 gtttccgacccatcaaagatgggcgactaatccaactcatgcgtagaggcatgcgcactgaccaaacgttgttctccctgagaatcgaaccc 5029826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 411
Target Start/End: Complemental strand, 10312803 - 10312701
Alignment:
Q  309 gtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgccactagagcc 408  Q
    |||||||||||||| || || ||||||||| ||| |||||| |||||||||| ||||| | ||| | ||| ||| ||||||| |  || |||||||||||    
T  10312803 gtgtagaggcatgcacattgcccaaacgttattctccctgggaatcgaacccggtatttcccaggtttgtccttggaaggagctctttaccactagagcc 10312704  T
Q  409 caa 411  Q
    |||    
T  10312703 caa 10312701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 341
Target Start/End: Complemental strand, 8888983 - 8888910
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgtt 341  Q
    ||||| ||| ||| ||| |||||||||| |||||| ||| || ||||||| |||||||||||||||||||||||    
T  8888983 ggttttcgatccatcaaaggtggacgactaatccgactcatgcgtagaggtatgcgcactggccaaacgttgtt 8888910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 277 - 417
Target Start/End: Original strand, 19230576 - 19230715
Alignment:
Q  277 acccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagata 375  Q
    ||||||||||| || ||||| ||||||||||||| ||||||||||||  |||| |||| ||||||| ||| || |||||||| || |||||||  || ||    
T  19230576 acccaccaatgatgaacgactaatccggctcgtgcgtagaggcatgcatactgaccaagcgttgtt-cccttgaaaatcgaatccggtattcccgag-ta 19230673  T
Q  376 tgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     || ||| ||||||| |  |||||||| |||||||| |||||    
T  19230674 cgtccttggaaggagctccttgccactggagcccaaacaact 19230715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 348
Target Start/End: Complemental strand, 31129279 - 31129198
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctg 348  Q
    ||||||||||| |||||| |||| || || |||| ||||| || ||||||||||||||||| ||||| ||||| ||||||||    
T  31129279 cggtttccgactcaccaaaggtgcacaactaatctggctcatgcgtagaggcatgcgcactagccaagcgttgctccccctg 31129198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 358
Target Start/End: Complemental strand, 11142705 - 11142614
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaac 358  Q
    |||| ||||||||||||| | ||||| || |||| | ||| || ||||||||||||||||||| ||||||||||| || |||  ||||||||    
T  11142705 cggtctccgacccaccaaagttggacaactaatctgactcatgcgtagaggcatgcgcactggtcaaacgttgtttccactgcgaatcgaac 11142614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 359
Target Start/End: Complemental strand, 4596175 - 4596143
Alignment:
Q  327 tggccaaacgttgttccccctggaaatcgaacc 359  Q
    |||||||||||||||||||||| ||||||||||    
T  4596175 tggccaaacgttgttccccctgaaaatcgaacc 4596143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 417
Target Start/End: Complemental strand, 9147373 - 9147253
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttatt 396  Q
    |||||||||  || ||||||||||| ||||||| |||  || ||||||||||| ||||||||||  |||||| ||| || || ||| ||| ||| |  ||    
T  9147373 aatccggcttatgcgtagaggcatgtgcactggtcaagtgtcgttccccctgggaatcgaacccgatattccccaggtacgtccttggaatgagctcctt 9147274  T
Q  397 gccactagagcccaagcaact 417  Q
     ||||| |||||||| |||||    
T  9147273 cccactggagcccaaacaact 9147253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 5e-32; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 2467126 - 2467276
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||| ||||||| ||||||||| |||||||||| ||  ||||| ||||||||||||||||  ||||||||||||||||||||||||| |||||    
T  2467126 cggtttccgacacaccaattgtggacgactaatccggctcatgcatagagacatgcgcactggccaagagttgttccccctggaaatcgaacccggtatt 2467225  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||| || ||| ||||||| |  |||||||| ||||||||||||||    
T  2467226 ccccggatacgtccttggaaggagctccttgccactggagcccaagcaact 2467276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 265 - 417
Target Start/End: Complemental strand, 43027410 - 43027257
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||||||||||| ||| | |||||||| |||||||||| || ||||||||||||||| ||| ||| ||||||||| ||||| |||||||||||||    
T  43027410 catcggtttccgacccatcaaagatggacgactaatccggctcatgcgtagaggcatgcgcattggacaatcgttgttcctcctgggaatcgaacccagt 43027311  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||| || ||| ||||||  || ||| | ||||||||| |||||||| |||||    
T  43027310 attccccaaatacgttcttgaaatgagctcattgccactggagcccaaacaact 43027257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 265 - 368
Target Start/End: Original strand, 9860000 - 9860104
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||||||| |||||||||||||||||| |||| ||||| ||||||||||||||| ||||||||||  |||||||||||||| |||||||||| ||    
T  9860000 catcggtttccgatccaccaatggtggacgactaatctggctcatgtgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggt 9860099  T
Q  364 attcc 368  Q
    |||||    
T  9860100 attcc 9860104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 357
Target Start/End: Complemental strand, 43033003 - 43032913
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaa 357  Q
    ||||||| |||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  43033003 cggtttctgacccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 43032913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 15884564 - 15884713
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||| |||||  |||||| ||||||| |||||||||| |||||    
T  15884564 cggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacttgccaagtgttgtt-cccctgggaatcgaacccggtatt 15884662  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || ||| || || ||| ||||||| |  || ||||| |||||||| |||||    
T  15884663 ccccaggtacgtccttggaaggagctccttaccactggagcccaatcaact 15884713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 265 - 417
Target Start/End: Complemental strand, 8141207 - 8141054
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    |||||||||| ||||||||||  ||||||||| ||| | |||| || ||||||||||||||||||||||| ||||||| |||||||||||||||||| ||    
T  8141207 catcggtttctgacccaccaaatgtggacgactaattcagctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctggaaatcgaacccggt 8141108  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||| |  ||| || ||| |||| || |  |||||||| |||||||| |||||    
T  8141107 attccccgaatacgtccttggaagcagctccttgccactggagcccaaacaact 8141054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 265 - 368
Target Start/End: Complemental strand, 10927711 - 10927607
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    |||||||||||||||||| || |||| ||||| |||||||||| || ||||||||||||||||||||||| ||||||||| ||| | |||||||||| ||    
T  10927711 catcggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacccggt 10927612  T
Q  364 attcc 368  Q
    |||||    
T  10927611 attcc 10927607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 14666079 - 14666229
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| |||||||||||  |||| |||| |||| |||| ||| |||||||||||||||||||||||  |||||| ||||||| |||||||||| |||||    
T  14666079 cggttttcgacccaccaactgtgggcgactaatctggcttgtgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtatt 14666178  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||| || ||| ||| ||| |  |||||||| ||||||||||||||    
T  14666179 ccccggatacgtccttggaatgagctccttgccactggagcccaagcaact 14666229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 16894037 - 16893889
Alignment:
Q  268 cggtttccgacccaccaatggtggacgacaatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    |||||||||||| ||||| ||||| |||||||||||||| || ||| ||||||| | ||||||||| |||| |||||||||  ||||||||||  |||||    
T  16894037 cggtttccgacc-accaaaggtgggcgacaatccggctcatgcgtaaaggcatgtgtactggccaagcgttattccccctgtgaatcgaacccgatattc 16893939  T
Q  368 ctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    | | |||| ||  || |||||||||  ||||||||| |||||||||||||    
T  16893938 cccggatacgtcattggaaggagttccttgccactatagcccaagcaact 16893889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 367
Target Start/End: Original strand, 4479304 - 4479403
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| |||||||||| ||||| |||| || ||||||||||||||||||||||| ||||||| ||||||| ||||||| || |||||    
T  4479304 cggtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgtt-cccctgggaatcgaatccggtatt 4479402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 270 - 417
Target Start/End: Complemental strand, 24837342 - 24837194
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||||||| ||||||| |||||||||| ||||| |||||||  ||||||||||  |||||||||| |||||||| |||||| |||||||| | |||||||    
T  24837342 gtttccgatccaccaaaggtggacgactaatcctgctcgtgcttagaggcatgaacactggccaagcgttgttctccctgggaatcgaacacggtattcc 24837243  T
Q  369 tcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     | | || || ||| ||||||| |  |||||||| ||||||||||||||    
T  24837242 ccgggtacgtacttggaaggagctccttgccactggagcccaagcaact 24837194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 417
Target Start/End: Original strand, 38922457 - 38922572
Alignment:
Q  302 ggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgccac 401  Q
    |||||||| ||| ||||||||||||||||||| |||||||||| |||| |||||||||| ||||||| | | || || ||| ||||||| |  |||||||    
T  38922457 ggctcgtgcgtaaaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccac 38922556  T
Q  402 tagagcccaagcaact 417  Q
    | ||||||||||||||    
T  38922557 tggagcccaagcaact 38922572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 2964178 - 2964028
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||| |||||||||| ||||| |||| ||||||| ||||| |||||||||||| || ||||||| ||||||||| | | | |||||||| | |||||    
T  2964178 cggtttctgacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacattggccaagcgttgttcctcatcggaatcgaacacggtatt 2964079  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | || |||||| ||||||| |  |||||||||||| ||||||||||    
T  2964078 ccccgggtacgttcttggaaggagctacttgccactagagtccaagcaact 2964028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 6100574 - 6100424
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| |||||||| || |||| ||||| |||||||||| || |||| |||||||||||||||||| ||||||||| ||||| |||||||||| |||||    
T  6100574 cggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagtggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtatt 6100475  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||| || |||  |||||| |  ||||||||  ||||||| |||||    
T  6100474 ccccggatacgtccttgaaaggagctccttgccactgaagcccaaacaact 6100424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 44893286 - 44893436
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||| ||| ||||  |||  ||||||||||||| |||||||||||| |||||||||| | ||||||||||| ||||| |||||| |||||    
T  44893286 cggtttccgacccatcaagggtgagcgattaatccggctcgtgcgtagaggcatgcacactggccaagcattgttccccctagaaattgaacccggtatt 44893385  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | || || ||| ||||||| |  |||||||| |||||||| |||||    
T  44893386 ccccgggtacgtccttggaaggagctccttgccactggagcccaaacaact 44893436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 8997552 - 8997702
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| | || ||||| |||| ||||| || ||| ||||||||| |||||| |||||||||||||| | | |||||||| | |||||    
T  8997552 cggtttccgacccaccaaagatgaacgactaatctggctcatgcgtataggcatgcgaactggcgaaacgttgttccccttaggaatcgaacacggtatt 8997651  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || |  |||||| |||  ||||||||  |||||||| ||| ||||||||||    
T  8997652 ccccgaatatgtccttgaaaggagttccttgccactggagtccaagcaact 8997702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 360
Target Start/End: Original strand, 68106 - 68199
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||||||||||||| ||| |||| ||||  ||||||||||||||||| ||||||||  ||||||||||||||||||| ||||  ||||||||||    
T  68106 cggtttccgacccatcaaaggtgaacgattaatccggctcgtgtgtaaaggcatgcatactggccaaacgttgttcctcctgagaatcgaaccc 68199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 368
Target Start/End: Complemental strand, 6042915 - 6042822
Alignment:
Q  276 gacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||||||| |||||| |||| |||||||||| || ||  ||||||||||||||||||| ||||||||||| ||| |||||||||| |||||||    
T  6042915 gacccaccagtggtgggcgactaatccggctcatgcgtttaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccggtattcc 6042822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 348
Target Start/End: Original strand, 13357964 - 13358045
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctg 348  Q
    ||||||||||||||| || || ||||||| |||||||||||||  ||||||||||| || ||||||||||||||||||||||    
T  13357964 cggtttccgacccactaaagggggacgactaatccggctcgtgcatagaggcatgcacattggccaaacgttgttccccctg 13358045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 417
Target Start/End: Original strand, 1013019 - 1013135
Alignment:
Q  301 cggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgcca 400  Q
    |||||| || ||||||||||| | ||||||||| ||||||||||||||| |||||||||| ||||||| | |||| || ||| |||  || |  ||||||    
T  1013019 cggctcatgcgtagaggcatgtgtactggccaagcgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaaaagctccttgcca 1013118  T
Q  401 ctagagcccaagcaact 417  Q
    || ||||||||||||||    
T  1013119 ctggagcccaagcaact 1013135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 359
Target Start/End: Complemental strand, 18374112 - 18374020
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacc 359  Q
    |||||| ||||||||||| | |||||||| |||||||||| || ||||||||||||||||||| ||| |||||||| |||||  |||||||||    
T  18374112 cggttttcgacccaccaaagttggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttctccctgagaatcgaacc 18374020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 271 - 417
Target Start/End: Complemental strand, 14846674 - 14846528
Alignment:
Q  271 tttccgacccaccaatggtggacgaca-atccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcct 369  Q
    ||||||||||||||| ||||||||||  ||| | ||| || |||||||||||||||||| |||| | ||||||||| ||  |||||||||| |||||||     
T  14846674 tttccgacccaccaaaggtggacgacttatctgactcatgcgtagaggcatgcgcactgaccaatcattgttcccc-tgagaatcgaacccggtattccc 14846576  T
Q  370 cagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    | | || || ||||||||||| || |||||| | |||||||| |||||    
T  14846575 cgggtacgtccttagaaggagcttcttgccagtggagcccaaacaact 14846528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 300 - 411
Target Start/End: Original strand, 34613819 - 34613930
Alignment:
Q  300 ccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgcc 399  Q
    ||||||| ||| |||||||||||| |||||||| |||||||||| ||||| ||||||||||  |||||| | |||| | | || ||||||| | ||||||    
T  34613819 ccggctcatgtatagaggcatgcgtactggccagacgttgttcctcctgggaatcgaacccgatattccccggatacggttttggaaggagctcattgcc 34613918  T
Q  400 actagagcccaa 411  Q
    ||| ||||||||    
T  34613919 actggagcccaa 34613930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 417
Target Start/End: Complemental strand, 26571029 - 26570876
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    |||||||||||||| || ||| |||||||||| |||||||||| || ||||| |||| | |||||||||| ||||||||||||| | ||| ||||||  |    
T  26571029 catcggtttccgactcatcaaaggtggacgactaatccggctcatgcgtagatgcatacacactggccaagcgttgttccccctaggaattgaacccgat 26570930  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||| | ||||||  | |||| |||  | |  ||||||||||||||||| |||||    
T  26570929 atttcccagatacatccttaaaagtcgctccttgccactagagcccaaacaact 26570876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 390
Target Start/End: Original strand, 3418521 - 3418644
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||| ||||||| || |||||||||| |||| | ||| || ||||| |||||||||||||||||  |||||||| |||  |||||||||||  ||||    
T  3418521 cggtttctgacccactaaaggtggacgactaatctgactcatgcgtagacgcatgcgcactggccaagtgttgttcctcctaaaaatcgaacccgatatt 3418620  T
Q  367 cctcagatatgttcttagaaggag 390  Q
    || |||||| || ||| |||||||    
T  3418621 ccccagatacgtccttggaaggag 3418644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 7673695 - 7673745
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccct 347  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||||||||    
T  7673695 aatccggctcgtgcgtagaggcatgcacactagccaaacgttgttccccct 7673745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 297 - 411
Target Start/End: Complemental strand, 13085596 - 13085482
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttatt 396  Q
    |||| |||||||| ||||||| |||| ||||||| ||||||||||||| |||  |||||||||| ||||||| | |||| || ||| ||||||| |  |     
T  13085596 aatctggctcgtgcgtagaggtatgcacactggctaaacgttgttccctctgagaatcgaacccggtattccccggatacgtccttggaaggagctcctc 13085497  T
Q  397 gccactagagcccaa 411  Q
    |||||| ||||||||    
T  13085496 gccactggagcccaa 13085482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 17981543 - 17981393
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||| |||||| | ||| | || ||| || |||||| |||||||||||| |||||| |||  |||||||||||||| |||||||||| |||||    
T  17981543 cggtttccgactcaccaaagctgggcaactaattcgactcgtgcgtagaggcatgcacactggtcaagagttgttccccctgggaatcgaacccggtatt 17981444  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     | | | ||  | ||| ||||||| |  |||||||| ||||||||||||||    
T  17981443 tcccgggtacatccttggaaggagctccttgccactggagcccaagcaact 17981393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 269 - 366
Target Start/End: Original strand, 34710576 - 34710674
Alignment:
Q  269 ggtttccgacccaccaatggtggacgacaa-tccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||| ||||||||||||| |||||||| | |||| || ||||||| ||||||||||||| |||||  |||||| ||||||| ||||||| || |||||    
T  34710576 ggttttcgacccaccaatgatggacgactagtccgacttgtgtgtaaaggcatgcgcactagccaagtgttgtttcccctgggaatcgaatccggtatt 34710674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 45521270 - 45521170
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||| ||| ||||  |||| |||||||||| || ||||||||||||||||||  |||  |||||| ||||||| |||||||||| |||||    
T  45521270 cggtttccgacccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactgatcaagtgttgtt-cccctgggaatcgaacccggtatt 45521172  T
Q  367 cc 368  Q
    ||    
T  45521171 cc 45521170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 360
Target Start/End: Complemental strand, 6940662 - 6940567
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    ||||||||||| ||||||||| |||||| ||| ||| || ||| |||||| ||  ||||||||| ||||| ||||||||| ||||||||||||||||    
T  6940662 catcggtttcctacccaccaaaggtggatgactaattcgactcatgtgtaaagt-atgcgcactagccaagcgttgttccacctggaaatcgaaccc 6940567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 8586978 - 8587029
Alignment:
Q  298 atccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctgg 349  Q
    ||||||||| || ||||||| ||||||||||||||| |||||||||||||||    
T  8586978 atccggctcatgcgtagaggtatgcgcactggccaagcgttgttccccctgg 8587029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 368
Target Start/End: Original strand, 33401837 - 33401908
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||||| ||| || |||||||||||| |||||| |||  ||||||||||||| ||||||||||| |||||||    
T  33401837 aatccgactcatgcgtagaggcatgcacactggtcaagtgttgttccccctgaaaatcgaacccggtattcc 33401908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 23895668 - 23895595
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttc 342  Q
    |||||||||||| ||| |||||||||  |||||  |||||| ||||||| ||||||||||||||| ||||||||    
T  23895668 gtttccgacccatcaaaggtggacgattaatccatctcgtgcgtagaggtatgcgcactggccaagcgttgttc 23895595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 265 - 417
Target Start/End: Complemental strand, 27975996 - 27975843
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    |||||||| | ||||||| || ||||| |||  ||||||||||  | |||||||||||| |||||  |||  ||||||||  |||| ||||||||||| |    
T  27975996 catcggttcctgacccactaaaggtgggcgattaatccggctcaagcgtagaggcatgcacactgatcaagtgttgttccttctgggaatcgaacccaat 27975897  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |||||||| ||||||   ||||| ||| |  || |||||||||||||| |||||    
T  27975896 attcctcaaatatgtctctagaaagagctccttaccactagagcccaaacaact 27975843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 265 - 417
Target Start/End: Complemental strand, 28033265 - 28033112
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    |||||||| | ||||||| || ||||| |||  ||||||||||  | |||||||||||| |||||  |||  ||||||||  |||| ||||||||||| |    
T  28033265 catcggttcctgacccactaaaggtgggcgattaatccggctcaagcgtagaggcatgcacactgatcaagtgttgttccttctgggaatcgaacccaat 28033166  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |||||||| ||||||   ||||| ||| |  || |||||||||||||| |||||    
T  28033165 attcctcaaatatgtctctagaaagagctccttaccactagagcccaaacaact 28033112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 265 - 353
Target Start/End: Original strand, 43349321 - 43349410
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaat 353  Q
    ||||| ||||||||||| ||| ||||  |||| ||||||||||||| ||||||| |||  ||||||| || ||||||||||||| |||||    
T  43349321 catcgttttccgacccatcaagggtgagcgactaatccggctcgtgagtagaggtatgaacactggcaaagcgttgttccccctagaaat 43349410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 417
Target Start/End: Original strand, 44031505 - 44031598
Alignment:
Q  324 cactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |||||||||| ||||||||||||||||||||||||||  |||| | | | ||  | ||| |||||||||  ||||||||||||| ||| |||||    
T  44031505 cactggccaagcgttgttccccctggaaatcgaacccgatatttcccggttacatccttggaaggagttccttgccactagagctcaaacaact 44031598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 359
Target Start/End: Original strand, 16291211 - 16291303
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacc 359  Q
    |||||| ||||||||||| ||||  |||| ||||| |||| ||  |||||||||| | |||||||||  ||||||||||||| ||||||||||    
T  16291211 cggttttcgacccaccaaaggtgagcgactaatccagctcatgcatagaggcatgtgtactggccaagtgttgttccccctgaaaatcgaacc 16291303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 8803159 - 8803096
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcact 327  Q
    |||||||||||||||||||| || ||| |||| ||||||||||||| |||||||  ||||||||    
T  8803159 catcggtttccgacccaccattgatgggcgactaatccggctcgtgcgtagaggtctgcgcact 8803096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 368
Target Start/End: Complemental strand, 34846885 - 34846814
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||| |||| ||| ||||||||||||  ||||||||| |||||||| || ||| |||||||||| |||||||    
T  34846885 aatctggcttgtgcgtagaggcatgcatactggccaagcgttgttcaccatgggaatcgaacccggtattcc 34846814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 358
Target Start/End: Complemental strand, 20240635 - 20240581
Alignment:
Q  304 ctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaac 358  Q
    |||||| |||||||||||||||||| ||||||||| ||   ||||||||||||||    
T  20240635 ctcgtgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaac 20240581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 358
Target Start/End: Original strand, 20252432 - 20252486
Alignment:
Q  304 ctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaac 358  Q
    |||||| |||||||||||||||||| ||||||||| ||   ||||||||||||||    
T  20252432 ctcgtgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaac 20252486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 341
Target Start/End: Complemental strand, 18091465 - 18091428
Alignment:
Q  304 ctcgtgtgtagaggcatgcgcactggccaaacgttgtt 341  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  18091465 ctcgtgcgtagaggcatgcgcactggtcaaacgttgtt 18091428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 34593613 - 34593576
Alignment:
Q  302 ggctcgtgtgtagaggcatgcgcactggccaaacgttg 339  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  34593613 ggctcgtgcgtagaggcatgtgcactggccaaacgttg 34593576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 417
Target Start/End: Original strand, 10535414 - 10535561
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||||||||  ||||| |||| ||||| ||| |||||| || || ||| |||||||||||| ||| || |||| |||||| |||| |||||  |||||||    
T  10535414 gtttccgacttaccaaaggtgaacgactaattcggctcatgcgtggagacatgcgcactggtcaagcggtgtt-cccctgaaaattgaaccatgtattcc 10535512  T
Q  369 tcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || |||| || ||| ||||||| |  |||||||| ||| |||| |||||    
T  10535513 tcggatacgtccttggaaggagctccttgccactggagtccaaacaact 10535561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 417
Target Start/End: Complemental strand, 29933844 - 29933725
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttatt 396  Q
    |||||||||| |  |||||||||||  |||||| |||  ||||||| |||||| |||||||||| ||||||  | ||||  ||||||||||||| |  ||    
T  29933844 aatccggctcatacgtagaggcatgtacactggtcaagtgttgttctccctgggaatcgaaccc-gtattctccggatacattcttagaaggagctcctt 29933746  T
Q  397 gccactagagcccaagcaact 417  Q
    |||||| ||| |||| |||||    
T  29933745 gccactggagtccaaacaact 29933725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 33935773 - 33935845
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcct 369  Q
    |||||| ||| || ||| |||||||||||||||||||  ||||||| |||| | ||||||| || ||||||||    
T  33935773 aatccgactcatgcgtataggcatgcgcactggccaagtgttgttctccctaggaatcgaatccggtattcct 33935845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 6462510 - 6462360
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||| |||||| |||  ||| |||| |||||||||| || ||||||||||||||||||||||| |||||||| |||||  |||||||||| |||||    
T  6462510 cggtttccaacccactaataatggtcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttctccctgtgaatcgaacccggtatt 6462411  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || |||||| || ||| ||||||| |  |||||||||||||||||||||||    
T  6462410 ccccagatacgtccttggaaggagctccttgccactagagcccaagcaact 6462360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 265 - 417
Target Start/End: Complemental strand, 29128020 - 29127867
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||||||||||||||| ||||| |||| |||||||||| || |||||||||||||||||| ||||  ||||||| |||||||||||||||||  |    
T  29128020 catcggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttctccctggaaatcgaacccgat 29127921  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||| |||||| || ||| ||||||  |  |||||||| |||||||| |||||    
T  29127920 attccccagatacgtccttggaaggatctccttgccactggagcccaaacaact 29127867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 268 - 415
Target Start/End: Complemental strand, 29136011 - 29135863
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||| |||||||||||||||| ||| |||||||||| || |||||||||||||||||||||||  |||||||||||||| ||||||| || |||||    
T  29136011 cggtttccaacccaccaatggtggaagactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaatccggtatt 29135912  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaa 415  Q
    || | |||| || ||| |||| || |  |||||||| ||||||||||||    
T  29135911 ccccggatacgtccttggaagaagctccttgccactggagcccaagcaa 29135863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 270 - 417
Target Start/End: Complemental strand, 30045917 - 30045769
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||| ||||||| ||| |||||||||| |||| | |||||| |||||| |||||||||||||||| ||||||||||||| | |||||||||| |||||||    
T  30045917 gtttacgacccatcaaaggtggacgactaatcagactcgtgcgtagagacatgcgcactggccaagcgttgttccccctaggaatcgaacccggtattcc 30045818  T
Q  369 tcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     ||  || ||||||| |||||| | ||||||||| ||||||||||||||    
T  30045817 ccatgtacgttcttaaaaggagctcattgccacttgagcccaagcaact 30045769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 270 - 417
Target Start/End: Original strand, 30767258 - 30767406
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||||||||||||||| ||||| |||| ||||||||||||| |||||||||||| ||||||||||  |||||||||||||||||||||||||  ||||||    
T  30767258 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctggaaatcgaacccgatattcc 30767357  T
Q  369 tcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     ||| ||  | ||| ||||||  |  |||||||| ||||||||||||||    
T  30767358 ccaggtacatccttggaaggaactccttgccactggagcccaagcaact 30767406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 265 - 387
Target Start/End: Complemental strand, 49198452 - 49198329
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    |||||||||| || |||||||||||||||||| |||||||||| || |||||||||||||||||||||||  |||||||||||| | |||||||||| ||    
T  49198452 catcggtttctgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggt 49198353  T
Q  364 attcctcagatatgttcttagaag 387  Q
    ||||| | ||||||| ||| ||||    
T  49198352 attccccggatatgtccttggaag 49198329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 10040654 - 10040505
Alignment:
Q  268 cggtttccgacccaccaatggtggacgacaat-ccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||| ||||||||| |||||||||| || |||||||||| ||||||||||||||||||||||| ||||||| ||||||  ||||||||||  ||||    
T  10040654 cggtttccaacccaccaaaggtggacgaccattccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt-cccctgagaatcgaacccgatatt 10040556  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | || || ||||||||||| |  |||||||| ||||||||||||||    
T  10040555 ccccgggtacgtccttagaaggagctccttgccactggagcccaagcaact 10040505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 13894024 - 13893874
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| ||| ||||||| ||||| |||| ||||||||||||||||||||||||||||| || |||| |||||||||||||||||||| ||||| |||||    
T  13894024 cggttttcgatccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcattgaccaagcgttgttccccctggaaatccaacccggtatt 13893925  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | || | || ||| ||||||| |  |||||||| |||||||| |||||    
T  13893924 ccccggacacgtccttggaaggagctccttgccactggagcccaaacaact 13893874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 28572220 - 28572370
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| ||||| |||| ||||||||||||| ||||||||||||  ||||||||| ||||||| ||||||| ||||||||||||||||    
T  28572220 cggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcatactggccaagcgttgtttcccctgggaatcgaacccagtatt 28572319  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | |  ||||||  |||||| |  |||||||| |||| |||||||||    
T  28572320 ccccgggtgcgttcttgaaaggagctccttgccactggagcacaagcaact 28572370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 45877552 - 45877402
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||| |||||||| ||||| |||||||||| || ||||||||||| |||||||||||  |||||| |||||||||||||||||| |||||    
T  45877552 cggtttccgacccatcaatggtgaacgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgtttcccctggaaatcgaacccggtatt 45877453  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||| || ||| ||||| | |  |||||||| |||||||| |||||    
T  45877452 ccccggatacgtccttggaaggggctccttgccactggagcccaaacaact 45877402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 54261324 - 54261174
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||| || |||| ||||| |||||||||| || ||||||||||||||||||||||| ||||||||| ||| | |||||||||| |||||    
T  54261324 cggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacccggtatt 54261225  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || ||| || || ||| ||||||| |  |||||||| |||||||| |||||    
T  54261224 ccccaggtacgtccttggaaggagctccttgccactggagcccaaacaact 54261174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 265 - 417
Target Start/End: Original strand, 7310709 - 7310862
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||||||||||||||| | ||  |||| ||||||||||||| |||||||||||| ||| || |||  ||||||||| |||| |||||||||| ||    
T  7310709 catcggtttccgacccaccaaagatgagcgactaatccggctcgtgcgtagaggcatgcacaccgggcaagtgttgttcccactgggaatcgaacccggt 7310808  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||||||| || |||||| ||||||| | ||||||||  |||||||| |||||    
T  7310809 attcctcaggtacgttcttggaaggagctcattgccaccggagcccaatcaact 7310862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 265 - 417
Target Start/End: Complemental strand, 47471932 - 47471780
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||||||||||||||| |||||||||| ||| |||||| || ||||| ||||||||||| ||||| | ||||||||| ||| |||||||||| ||    
T  47471932 catcggtttccgacccaccaaaggtggacgactaattcggctcatgcgtagaagcatgcgcactagccaagcattgttcccc-tgggaatcgaacccggt 47471834  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |||||  || || || ||| ||||||| |  |||||||||||||||||||||||    
T  47471833 attccctaggtacgtccttggaaggagctctttgccactagagcccaagcaact 47471780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 269 - 417
Target Start/End: Original strand, 51682964 - 51683113
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    |||||||||||||||| |||||| |||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||  ||||||    
T  51682964 ggtttccgacccaccattggtgggcgactaatccggctcgtgtggagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacctggtattc 51683063  T
Q  368 ctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    | | |||| ||  || ||||||| |  | |||||| |||||||| |||||    
T  51683064 cccggatacgtctttggaaggagctcctcgccactggagcccaaacaact 51683113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 25295058 - 25294908
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||| |||||||||||||||||||| |||||||||| ||  ||||||||||||||||||||||  |||||| |||| |  |||| ||||| |||||    
T  25295058 cggtttccaacccaccaatggtggacgactaatccggctcatgcatagaggcatgcgcactggccaagtgttgtttccccagagaatcaaacccggtatt 25294959  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |||| || ||| ||||||| |  |||||||| ||||||||||||||    
T  25294958 ccccggatacgtccttggaaggagctccttgccactggagcccaagcaact 25294908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 15320284 - 15320134
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||| |||||||||| ||||| |||| ||||||||||||| |||||||||||| |||||||||| | ||||||| ||| |||||||||||| |||||    
T  15320284 cggtttctgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaatcattgttcctcctcgaaatcgaacccggtatt 15320185  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | || || ||| ||||||| |  |||||||| ||| |||| |||||    
T  15320184 ccccgggtacgtccttggaaggagctccttgccactggagtccaaacaact 15320134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 361
Target Start/End: Original strand, 50405612 - 50405706
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccca 361  Q
    |||||||||||||||||||||||| |||| |||||| |||||| ||||||||||||||||||| ||| ||||||| ||||| | |||||||||||    
T  50405612 cggtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcactggtcaagcgttgtttcccctcggaatcgaaccca 50405706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 7650325 - 7650224
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||| ||||||||| ||||| |||| ||||||||||||| |||||| ||| || |||||||||  ||||||||||||||||||||||||| |||||    
T  7650325 cggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgtagagacattcgtactggccaagtgttgttccccctggaaatcgaacccggtatt 7650226  T
Q  367 cc 368  Q
    ||    
T  7650225 cc 7650224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 265 - 417
Target Start/End: Complemental strand, 35316057 - 35315904
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    |||||||||||||||||||||  |||| |||| ||||| |||| || |||||||||||||||||||||||  |||||||||||||| ||||||||||  |    
T  35316057 catcggtttccgacccaccaaaagtgggcgactaatccagctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgat 35315958  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||  | | || || ||| ||||||| |  |||||||| |||||||| |||||    
T  35315957 attctccgggtacgtccttggaaggagctctttgccactggagcccaaacaact 35315904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 270 - 417
Target Start/End: Complemental strand, 33251758 - 33251610
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||| ||||||| |||  ||||||||| |||||||||| || |||||||||||| ||||||||||||||||||||| | || |||||||||| |||||||    
T  33251758 gttttcgacccatcaaatgtggacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcccaccgggaatcgaacccggtattcc 33251659  T
Q  369 tcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     |  ||| || ||| ||||||| | ||||||||  |||||||| |||||    
T  33251658 cctaatacgtccttggaaggagctcattgccaccggagcccaaacaact 33251610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 7328941 - 7328792
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| ||||||||||| ||||| |||| |||||||||| || ||| |||||||||||||||||||  |||||||||||||| |||||||||| |||||    
T  7328941 cggttttcgacccaccaaaggtgggcgactaatccggctcatgcgta-aggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtatt 7328843  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     | | | || || ||| ||||||  |  ||||||||||||| |||||||||    
T  7328842 tcccgggtacgtccttggaaggaactccttgccactagagcacaagcaact 7328792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 26207810 - 26207960
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||| |||  ||| |||| |||||||||| || |||||||||||| |||||| ||| ||||||||||| ||| |||||||||| |||||    
T  26207810 cggtttccgacccactaataatggccgactaatccggctcatgcgtagaggcatgcacactggacaagcgttgttccccgtgggaatcgaacccggtatt 26207909  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | ||  | ||| ||||||| |  |||||||| ||||||||||||||    
T  26207910 ccccgggtacatccttggaaggagctccttgccactggagcccaagcaact 26207960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 29762164 - 29762314
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||  ||||||||||||||||||||||  |||||| ||||||  ||||| ||||  ||||    
T  29762164 cggtttccgacccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcactggccaagtgttgttgcccctgagaatcggacccgatatt 29762263  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || |  |||  | ||| ||||||| |  |||||||| ||||||||||||||    
T  29762264 ccccgaatacatccttggaaggagctccttgccactggagcccaagcaact 29762314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 51060290 - 51060440
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||||||||||||||||| ||||| | || || |||||||||||||||||| ||||  |||||||||||||  ||||||||||  ||||    
T  51060290 cggtttccgacccaccaatggtggacgactaatccagttcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgagaatcgaacccgatatt 51060389  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | ||||  | ||| ||||||| |  |||||||| ||| |||| |||||    
T  51060390 ccccggatagatccttggaaggagctatttgccactggagtccaaacaact 51060440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 368
Target Start/End: Original strand, 3507542 - 3507643
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| ||||  |||| ||||||||||||| |||||||||||||||||||||||  ||||||||| || | |||| ||||| |||||    
T  3507542 cggtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccctctaggaatcaaacccggtatt 3507641  T
Q  367 cc 368  Q
    ||    
T  3507642 cc 3507643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 366
Target Start/End: Original strand, 41630523 - 41630620
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||| ||||| ||||| |||| |||||||||| |||||||||||||||||||||| ||| ||||||||||| ||| ||| |||||| |||||    
T  41630523 gtttccgaccaaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgggcaagcgttgttccccttgggaattgaacccggtatt 41630620  T

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Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 47219242 - 47219141
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||| ||| |||||||||| |||||||||| || ||||||||||||||||| ||||| ||||||| ||| ||| |||||||||  |||||    
T  47219242 cggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactagccaagcgttgtttcccttgggaatcgaacctggtatt 47219143  T
Q  367 cc 368  Q
    ||    
T  47219142 cc 47219141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 401
Target Start/End: Original strand, 52168576 - 52168713
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||| ||||||| |||| ||| ||||| |||||||||| ||||| | |||||||||| ||||||||| |||||| ||||||||||||||||   |    
T  52168576 catcggttttcgacccatcaattgtgaacgactaatccggctcatgtgttggggcatgcgcattggccaaacattgttcaccctggaaatcgaacctgat 52168675  T
Q  364 attcctcagatatgttcttagaaggagtttattgccac 401  Q
    |||   | | ||||| |||||||||||||| |||||||    
T  52168676 attatccgggtatgtccttagaaggagtttcttgccac 52168713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 368
Target Start/End: Original strand, 55069688 - 55069789
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| ||||  |||  ||||||||||||| ||||||||||| ||||||||||||||||||||||  | | |||| |||||||||||    
T  55069688 cggtttccgacccaccaaaggtgagcgattaatccggctcgtgcgtagaggcatgtgcactggccaaacgttgttccctataggaatcaaacccagtatt 55069787  T
Q  367 cc 368  Q
    ||    
T  55069788 cc 55069789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 297 - 417
Target Start/End: Original strand, 42412813 - 42412933
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttatt 396  Q
    |||||||||| || ||||||||||| ||||| ||||| |||||||||||| || |||||||||| ||||||| | |||| || ||| ||||||| |  ||    
T  42412813 aatccggctcatgcgtagaggcatgggcacttgccaagcgttgttccccccgggaatcgaacccggtattccccggatacgtccttggaaggagctcctt 42412912  T
Q  397 gccactagagcccaagcaact 417  Q
    |||| | ||||||||||||||    
T  42412913 gccattggagcccaagcaact 42412933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 265 - 368
Target Start/End: Original strand, 47749111 - 47749214
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||||||||| ||||| ||||| |||| ||| ||||||||| |||||||||||||||||||||||  |||||| ||||| | |||||||||| ||    
T  47749111 catcggtttccgacctaccaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaagagttgtt-cccctaggaatcgaacccggt 47749209  T
Q  364 attcc 368  Q
    |||||    
T  47749210 attcc 47749214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 270 - 417
Target Start/End: Complemental strand, 48342116 - 48341968
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||||||| ||||||| | |||||||| |||| || || || ||||||||||||||||| ||||| ||||||||||||| | ||| |||||| |||||||    
T  48342116 gtttccgatccaccaaagatggacgactaatctggttcatgcgtagaggcatgcgcactagccaagcgttgttccccctaggaatagaacccggtattcc 48342017  T
Q  369 tcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     ||| || || ||| ||||||| |  |||||||| |||||||| |||||    
T  48342016 ccaggtacgtccttggaaggagctccttgccactggagcccaaacaact 48341968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 368
Target Start/End: Complemental strand, 8164648 - 8164550
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||||| ||||||| ||||| |||| |||||| |||||| ||| ||||||||||||||||||| ||||||||||| | ||||| |||||| |||||||    
T  8164648 tttccgatccaccaaaggtgggcgactaatccgactcgtgcgtaaaggcatgcgcactggccaagcgttgttccccttagaaattgaacccggtattcc 8164550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 35923632 - 35923782
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| ||| ||| ||| | |||||||| ||| || ||||||  ||||||||||||||||||||||||||||||||||||   |||||||||  |||||    
T  35923632 cggttttcgatccatcaaagatggacgactaattcgactcgtgcttagaggcatgcgcactggccaaacgttgttccccctatgaatcgaacctggtatt 35923731  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |  ||| || || ||| ||| ||| | |||||||||||||||||| |||||    
T  35923732 ctccaggtacgtccttggaatgagctcattgccactagagcccaaacaact 35923782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 329
Target Start/End: Original strand, 49021212 - 49021274
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactgg 329  Q
    ||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||    
T  49021212 cggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgg 49021274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 411
Target Start/End: Complemental strand, 49543615 - 49543473
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||||||||||| || ||||| |||| ||| ||||||||| |||||||||||| ||||| |||||||||||||||| ||  ||||||||||  ||||||    
T  49543615 gtttccgacccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccatgagaatcgaacccgatattcc 49543516  T
Q  369 tcagatatgttcttagaaggagtttattgccactagagcccaa 411  Q
       |||| || ||| ||||||| |  ||||||||| |||||||    
T  49543515 cgggatacgtccttggaaggagctccttgccactaaagcccaa 49543473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 359
Target Start/End: Original strand, 26361976 - 26362068
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacc 359  Q
    |||||||||||||| ||| ||||  |||| ||||||||||||| |||||||||||| ||||| |||||||||||||||| ||| |||| ||||    
T  26361976 cggtttccgacccatcaaaggtgtgcgactaatccggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccttgggaatcaaacc 26362068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 359
Target Start/End: Complemental strand, 31072976 - 31072884
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacc 359  Q
    |||||||| ||| ||||| |||||||||  |||| || ||||| ||||||||||| |||||| |||| |||||||||||||||||||||||||    
T  31072976 cggtttccaacctaccaaaggtggacgattaatctgggtcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaacc 31072884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 417
Target Start/End: Complemental strand, 49082884 - 49082772
Alignment:
Q  305 tcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgccactag 404  Q
    ||||||||||| |||||||||||||| || |||||||| |||||| |||||||| | ||||||| | |||| || ||||||||||| |   ||||||| |    
T  49082884 tcgtgtgtagatgcatgcgcactggctaagcgttgttctccctgggaatcgaactcggtattccccggatacgtccttagaaggagctccctgccactgg 49082785  T
Q  405 agcccaagcaact 417  Q
    ||||||| |||||    
T  49082784 agcccaaacaact 49082772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 3136703 - 3136852
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||| ||||| |||||||||| |||||| ||| || |||||||||||||||||| ||||  |||||| |||||| |||||||| || |||||    
T  3136703 cggtttccgaccaaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactgcccaagtgttgtt-cccctgaaaatcgaatccggtatt 3136801  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | || || |||  |||||| || |||||||  |||||||| |||||    
T  3136802 ccccgggtacgtccttgaaaggagcttcttgccacgggagcccaaacaact 3136852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 7648831 - 7648757
Alignment:
Q  275 cgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctg 348  Q
    ||||||| ||| ||||| |||| ||||||||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  7648831 cgacccaacaaaggtgggcgactaatccggctcgtgcgtagaggtatgcgcactggtcaaacgttgttccccctg 7648757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 417
Target Start/End: Original strand, 11687162 - 11687268
Alignment:
Q  311 gtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgccactagagccca 410  Q
    ||||||||||||||||||||||| | ||||||||||||  |||| ||||| ||||||  ||| || || ||| ||||||| || |||||||| |||||||    
T  11687162 gtagaggcatgcgcactggccaagcattgttccccctgagaatcaaacccggtattctccaggtacgtccttggaaggagcttcttgccactggagccca 11687261  T
Q  411 agcaact 417  Q
    | |||||    
T  11687262 aacaact 11687268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 357
Target Start/End: Complemental strand, 19147059 - 19146969
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaa 357  Q
    |||||||||||||||||| |||||||||| ||||| |||||||  |||||| || | |||||||||| ||||||||| |||| ||||||||    
T  19147059 cggtttccgacccaccaaaggtggacgactaatccagctcgtgcatagagggatacacactggccaagcgttgttcctcctgaaaatcgaa 19146969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 365
Target Start/End: Complemental strand, 26043910 - 26043812
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtat 365  Q
    ||||||| ||| |||||| ||||  |||| |||||||||| || |||||||||||||||||||||||  ||||||| |||||| |||||||||| ||||    
T  26043910 cggtttctgactcaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttctccctgggaatcgaacccggtat 26043812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 366
Target Start/End: Complemental strand, 10855444 - 10855383
Alignment:
Q  305 tcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||||||||| ||||| |||||    
T  10855444 tcgtgcgtagaggcatgcgtactggccaagcgttgttccccctggaaatcaaacccggtatt 10855383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 368
Target Start/End: Original strand, 15795503 - 15795603
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| |||||||||| |||||| |||| ||| | ||||||| |||||||||||||||||| |||| ||||||| ||||||| |||||||| | |||||    
T  15795503 cggttttcgacccaccattggtgggcgactaattcagctcgtgcgtagaggcatgcgcactgaccaagcgttgtt-cccctgggaatcgaactcggtatt 15795601  T
Q  367 cc 368  Q
    ||    
T  15795602 cc 15795603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 356
Target Start/End: Complemental strand, 54237546 - 54237457
Alignment:
Q  268 cggtttccgacccaccaatggtggacgaca-atccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcga 356  Q
    ||||||||||||||| |||||||||||||  ||||||||| || |||||| ||||||||||| ||||  ||||||| ||||| |||||||    
T  54237546 cggtttccgacccactaatggtggacgacttatccggctcatgcgtagagacatgcgcactgaccaagtgttgttctccctgaaaatcga 54237457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 26590311 - 26590375
Alignment:
Q  303 gctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    |||||||||||||||||||| ||||| |||| ||||||||||||||  ||||||||||| |||||    
T  26590311 gctcgtgtgtagaggcatgcacactgaccaagcgttgttccccctgagaatcgaacccaatattc 26590375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 359
Target Start/End: Complemental strand, 4638255 - 4638160
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacc 359  Q
    |||||||||||||||||  || ||||| | || ||||||||||||| ||||||| ||||||||||| ||| ||||||| | ||||| |||||||||    
T  4638255 catcggtttccgacccattaaaggtgggctactaatccggctcgtgcgtagaggtatgcgcactggtcaagcgttgtttctcctgggaatcgaacc 4638160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 370
Target Start/End: Complemental strand, 23511665 - 23511562
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| ||||||| ||| |||||||||  |||||| ||| || ||||||||||||||||||| ||||||||| ||||| ||  ||||||||||  ||||    
T  23511665 cggttttcgacccatcaaaggtggacgattaatccgactcatgcgtagaggcatgcgcactggtcaaacgttgctccccttgtgaatcgaacccgatatt 23511566  T
Q  367 cctc 370  Q
    ||||    
T  23511565 cctc 23511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 281 - 357
Target Start/End: Complemental strand, 3755655 - 3755578
Alignment:
Q  281 accaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaa 357  Q
    ||||| ||| |||||| |||||||||| || |||||| |||||||||||| ||||||||||||| ||||| |||||||    
T  3755655 accaaaggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaaacgttgttcctcctgggaatcgaa 3755578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 8362675 - 8362574
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||| || |||| || |||||||||| |||  ||||| || ||||||||||||| ||||||||||||||||| || |||| ||| |||||| |||||    
T  8362675 cggtttcggatccactaaaggtggacgactaatttggctcatgcgtagaggcatgcggactggccaaacgttgtttccactgggaattgaacccggtatt 8362576  T
Q  367 cc 368  Q
    ||    
T  8362575 cc 8362574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 52364813 - 52364910
Alignment:
Q  272 ttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||||||||| ||| ||| |||||  ||||| ||||||| ||||||||||||||||||| ||| |||||||||  |||| |||||||| | |||||||    
T  52364813 ttccgacccatcaaaggtagacgattaatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgttccttctgggaatcgaactcggtattcc 52364910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 53649825 - 53649724
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||| ||| ||| |||| ||||| |||||||||| || |||||| || |||||||||||||  ||||||| |||||  |||||||||| |||||    
T  53649825 cggtttccgatccatcaaaggtgaacgactaatccggctcatgcgtagagacaggcgcactggccaagtgttgttcaccctgagaatcgaacccggtatt 53649726  T
Q  367 cc 368  Q
    ||    
T  53649725 cc 53649724  T

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Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 417
Target Start/End: Complemental strand, 41219660 - 41219541
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttatt 396  Q
    ||||| ||||||| | |||||||| |||||||||||||||||||||| ||||  ||||||||   ||||||| |  ||| || ||||||||||| | |||    
T  41219660 aatccagctcgtgcgcagaggcatacgcactggccaaacgttgttcctcctgagaatcgaacttggtattcc-cgtatacgtccttagaaggagctcatt 41219562  T
Q  397 gccactagagcccaagcaact 417  Q
    || ||  ||||||||||||||    
T  41219561 gcaacgggagcccaagcaact 41219541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 360
Target Start/End: Original strand, 45402357 - 45402453
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||| ||||||||||||| || |||| ||||| |||||||||| || |||||||||||||||| |||| |  ||||||||| || | ||||||||||    
T  45402357 catcagtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcacaggccgagtgttgttccctctaggaatcgaaccc 45402453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 275 - 357
Target Start/End: Complemental strand, 928691 - 928608
Alignment:
Q  275 cgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaa 357  Q
    |||| |||||| |||||| ||| ||||||||||||| |||| |||||||||||||| |||  |||||||||||||  |||||||    
T  928691 cgactcaccaaaggtggatgactaatccggctcgtgcgtagcggcatgcgcactggtcaagtgttgttccccctgagaatcgaa 928608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 417
Target Start/End: Original strand, 37092565 - 37092664
Alignment:
Q  318 catgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |||||||||||||||||||||||||||| |||||||| || ||  |||||| | | || || ||| |||| || |  |||||||| ||||||||||||||    
T  37092565 catgcgcactggccaaacgttgttccccttggaaatctaatccgatattccacgggtacgtccttggaagaagctccttgccactggagcccaagcaact 37092664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 333
Target Start/End: Complemental strand, 33689049 - 33688983
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaa 333  Q
    |||||||| |||||||||||||||| ||| || | ||||| || |||||||||||||||||||||||    
T  33689049 cggtttccaacccaccaatggtggatgactaaactggctcatgcgtagaggcatgcgcactggccaa 33688983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 329
Target Start/End: Original strand, 43330749 - 43330803
Alignment:
Q  276 gacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactgg 329  Q
    |||||||||| ||||| |||| ||||||||||||| |||||||||||||||||||    
T  43330749 gacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactgg 43330803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 368
Target Start/End: Original strand, 7612987 - 7613036
Alignment:
Q  319 atgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||||||| ||||| ||||||||||||||| |||||||||| |||||||    
T  7612987 atgcgcactagccaagcgttgttccccctgggaatcgaacccggtattcc 7613036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 360
Target Start/End: Original strand, 24506657 - 24506749
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||||||||||||||||||||||  |||| |||| | ||| || ||||||||||| ||||||| ||| |||||||  ||||| |||||||||||    
T  24506657 cggtttccgacccaccaatggtgagcgactaatctgactcatgcgtagaggcatgtgcactggtcaagcgttgtt-tccctgaaaatcgaaccc 24506749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 342
Target Start/End: Original strand, 34460549 - 34460594
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttc 342  Q
    ||||||||||||| || ||||||||| |||||||||||||||||||    
T  34460549 aatccggctcgtgcgtggaggcatgcacactggccaaacgttgttc 34460594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 390
Target Start/End: Original strand, 24146340 - 24146460
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcct 369  Q
    ||||||||||| |||||||||||||| ||| |||||| ||| |||||||||||| | || ||||  ||||||  || ||  |||| |||||  ||||||     
T  24146340 tttccgacccatcaatggtggacgactaattcggctcatgtctagaggcatgcgtattgaccaagtgttgttatccttgagaatcaaacccgatattccc 24146439  T
Q  370 cagatatgttcttagaaggag 390  Q
    ||||||||| ||| |||||||    
T  24146440 cagatatgtccttggaaggag 24146460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 360
Target Start/End: Original strand, 34662325 - 34662421
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    ||||||||||| | |||| || |||||||||| ||| |||||| ||  ||||| |||||| |||| ||||||||| |||| |||| |||||||||||    
T  34662325 catcggtttccaatccactaaaggtggacgactaattcggctcatgcatagagacatgcgtactgaccaaacgttattcctcctgaaaatcgaaccc 34662421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 367
Target Start/End: Original strand, 45450500 - 45450555
Alignment:
Q  311 gtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    ||||||||||||||||||| ||| | ||||| |||||||||||| ||||||||||||    
T  45450500 gtagaggcatgcgcactggtcaagcattgtt-cccctggaaatcaaacccagtattc 45450555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 360
Target Start/End: Original strand, 47303507 - 47303591
Alignment:
Q  277 acccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||| |||| ||| |||||| |||||||||| |||||||||||||| |||||| ||||  |||||||| ||||| |||| |||||    
T  47303507 acccgccaaaggttgacgactaatccggctcatgtgtagaggcatgtgcactgaccaagtgttgttcctcctgggaatcaaaccc 47303591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 367
Target Start/End: Complemental strand, 28242331 - 28242276
Alignment:
Q  312 tagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattc 367  Q
    |||||||||| ||||||||||||| ||||||| ||||| |||| ||||| ||||||    
T  28242331 tagaggcatgtgcactggccaaacattgttcctcctggcaatctaacccggtattc 28242276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 39849139 - 39849077
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||||||||| || |||||||||||| |||||||||| ||||||| || |||| ||||||||||    
T  39849139 aatccggctcatgcgtagaggcatgcacactggccaagcgttgtt-cctctgggaatcgaaccc 39849077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 366
Target Start/End: Original strand, 40660336 - 40660435
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| ||||||||||| |||| | ||  ||||||| || || |||||||||||||||||| ||||| |||||||| ||| | ||||||| || |||||    
T  40660336 cggttttcgacccaccaaaggtgaatgattaatccggttcatgcgtagaggcatgcgcactgaccaaatgttgttcctcctaggaatcgaatccggtatt 40660435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 322
Target Start/End: Original strand, 50753350 - 50753405
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgc 322  Q
    |||||||||||||||||||| || ||||| |||||| |||||| ||||||||||||    
T  50753350 cggtttccgacccaccaatgatgaacgactaatccgactcgtgcgtagaggcatgc 50753405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 366
Target Start/End: Original strand, 20948115 - 20948169
Alignment:
Q  312 tagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||| |||||| |||| |||||||||  ||| ||||||||||||||||    
T  20948115 tagaggcatgcacactggtcaaatgttgttccctttggtaatcgaacccagtatt 20948169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 357
Target Start/End: Original strand, 2029277 - 2029366
Alignment:
Q  269 ggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaa 357  Q
    ||||| ||||||| ||||||||| |||| ||||| |||| || ||||||||||||| |||  |||| ||||||| | |||| ||||||||    
T  2029277 ggtttgcgacccatcaatggtgggcgactaatccagctcatgcgtagaggcatgcgtactaaccaagcgttgtttctcctgaaaatcgaa 2029366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 5549346 - 5549293
Alignment:
Q  315 aggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||||||||| ||| ||| ||||||||   |||||||||||||||||||||||    
T  5549346 aggcatgcgcattggtcaagcgttgttcttactggaaatcgaacccagtattcc 5549293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 320 - 360
Target Start/End: Complemental strand, 50682522 - 50682482
Alignment:
Q  320 tgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||||||||||||| |||||||| |||| ||||||||||||    
T  50682522 tgcgcactggccaagcgttgttctccctagaaatcgaaccc 50682482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 265 - 417
Target Start/End: Complemental strand, 6076 - 5924
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    |||||||||||||||||||||||||||||||| ||| || ||| || ||||||||||| ||||||||||| ||||| |||||||||||||||||||||||    
T  6076 catcggtttccgacccaccaatggtggacgactaattcgtctcatgcgtagaggcatgtgcactggccaagcgttg-tccccctggaaatcgaacccagt 5978  T
Q  364 attcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||| | | || |  |||  |||||| |  ||||||||||| |||||||||||    
T  5977 attccccgggtacgcccttgaaaggagctccttgccactagaacccaagcaact 5924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 270 - 375
Target Start/End: Original strand, 8711 - 8817
Alignment:
Q  270 gtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||||||||||||||| |||||||||| ||||| |||| || ||||||||| ||||||||||||| ||||||||||||||| |||||||||| |||||||    
T  8711 gtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaacccggtattcc 8810  T
Q  369 tcagata 375  Q
    || ||||    
T  8811 tctgata 8817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 6956 - 6855
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| ||||  |||| |||||||||| || |||||||||||||||||||||||  |||||||||||||| |||||||||| |||||    
T  6956 cggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtatt 6857  T
Q  367 cc 368  Q
    ||    
T  6856 cc 6855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 272 - 357
Target Start/End: Original strand, 155723 - 155809
Alignment:
Q  272 ttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaa 357  Q
    |||||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| |||||||    
T  155723 ttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttccccctgggaatcgaa 155809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 368
Target Start/End: Original strand, 25836 - 25893
Alignment:
Q  311 gtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||||| |||||||||||||||| |||||||| |||| | |||||||||  |||||||    
T  25836 gtagagtcatgcgcactggccaagcgttgttctccctaggaatcgaaccttgtattcc 25893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 42840 - 42990
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| ||||| |||| |||||||||| ||||||||||||||||||||| |||| | |||||| |||| | ||||||||||  ||||    
T  42840 cggtttccgacccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgaccaagcattgttctccctaggaatcgaacccgatatt 42939  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || ||| ||  ||||| |||| || |  |||||||| ||| ||||||||||    
T  42940 ccccaggtacattcttggaagtagctcgttgccactggagtccaagcaact 42990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 368
Target Start/End: Complemental strand, 9479 - 9436
Alignment:
Q  325 actggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||    
T  9479 actggccaagcgttgttccccctgggaatcgaacccggtattcc 9436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 54; Significance: 7e-22; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 408
Target Start/End: Complemental strand, 319523 - 319382
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||| |||||||| |||||||||| ||||| |||| ||  |||||| ||||||||||||||| ||||||||||||| |||||| ||||| |||||    
T  319523 cggtttccgccccaccaaaggtggacgactaatccagctcatgcatagagggatgcgcactggccaagcgttgttccccctagaaatcaaacccggtatt 319424  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcc 408  Q
    || | |||| || ||| ||||||| |  |||||||| |||||    
T  319423 ccccggatacgtccttggaaggagctccttgccactggagcc 319382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 671 - 521
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| ||||  |||| |||| ||||| |  |||||||||||| |||||  |||  |||||||||||||  |||||||||| |||||    
T  671 cggtttccgacccaccaaaggtgagcgactaatctggctcatacgtagaggcatgcacactgatcaagtgttgttccccctgcgaatcgaacccggtatt 572  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | | || || ||| ||||||| |  |||||||||||||||||||||||    
T  571 ccccgggtacgtccttggaaggagctccttgccactagagcccaagcaact 521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 417
Target Start/End: Original strand, 412091 - 412184
Alignment:
Q  324 cactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    ||||| |||| ||||||||||||||  |||||||| | ||||||| | |||| || ||| ||||||| | || ||||||  |||||||||||||    
T  412091 cactgaccaagcgttgttccccctgtgaatcgaactcggtattccccggatacgtccttggaaggagctcatcgccactgaagcccaagcaact 412184  T

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Target: scaffold0006 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 68615 - 68468
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| ||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||   |||| ||||||||||||||| ||||||||||  ||||    
T  68615 cggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaacccgatatt 68519  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
     | | | || || ||| ||||||| |  ||||||||||||||||| |||||    
T  68518 tcccgggtacgtccttggaaggagctccttgccactagagcccaaacaact 68468  T

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Target: scaffold0376 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 12771 - 12621
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||| |||||| ||| ||||| |||| ||||||| ||||| |||||||||||| |||||||||| ||||||||| |||   |||||||||| |||||    
T  12771 cggtttctgacccatcaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctctgaatcgaacccggtatt 12672  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || | |  | || ||| ||||||| || |||||||||||| ||||||||||    
T  12671 ccccgggcacgtccttggaaggagcttcttgccactagagtccaagcaact 12621  T

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Target: scaffold0316 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 417
Target Start/End: Original strand, 1622 - 1772
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||| ||||||||||| ||||| |||| |||  ||||| || |||||||||||||||||||| || |||||||||||||||||||||||||  |||||    
T  1622 cggttttcgacccaccaaaggtgggcgactaatttggctcatgcgtagaggcatgcgcactggctaatcgttgttccccctggaaatcgaacctggtatt 1721  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    || |||  | ||  || ||||||| |  |||||||| ||| ||||||||||    
T  1722 ccccaggcacgtcattggaaggagctccttgccacttgagtccaagcaact 1772  T

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Target: scaffold0116 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 17494 - 17429
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactgg 329  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  17494 catcggtttccgacccatcaatggtgggcgactaatccggctcgtgtgtagaagcatgcgcactgg 17429  T

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Target: scaffold0005 (Bit Score: 46; Significance: 4e-17; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 417
Target Start/End: Original strand, 271115 - 271232
Alignment:
Q  300 ccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggagtttattgcc 399  Q
    |||||||||| |||||| ||||||||||| |||| ||||||||||||||| ||||||||||  |||||  | | || || ||| ||||||| |  |||||    
T  271115 ccggctcgtgcgtagagacatgcgcactgaccaagcgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaaggagctccttgcc 271214  T
Q  400 actagagcccaagcaact 417  Q
    || |||||||||||||||    
T  271215 accagagcccaagcaact 271232  T

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Target: scaffold0005; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 335
Target Start/End: Original strand, 250036 - 250101
Alignment:
Q  271 tttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaac 335  Q
    ||||||||||||||| || |  |||| ||||||||||||| |||||||||||||||||||||||||    
T  250036 tttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaaac 250101  T

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Target: scaffold0005; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 219470 - 219402
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaac 335  Q
    |||||| ||| ||| ||| |||||||||| ||||| | ||||| |||||||||||||||||||||||||    
T  219470 cggttttcgatccatcaaaggtggacgactaatccagttcgtgcgtagaggcatgcgcactggccaaac 219402  T

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Target: scaffold0005; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 390
Target Start/End: Original strand, 249343 - 249436
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcctcagatatgttcttagaaggag 390  Q
    |||||| |||||| ||||||| ||| ||||||| ||| |||| ||| |||||  |||||||||  ||||||| || ||| || |||||||||||    
T  249343 aatccgactcgtgcgtagaggtatgtgcactggtcaagcgttattctccctgagaatcgaacctggtattccccaaatacgtccttagaaggag 249436  T

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Target: scaffold0004 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 271 - 416
Target Start/End: Original strand, 94991 - 95136
Alignment:
Q  271 tttccgacccaccaa-tggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    ||||||||||||||| |||||| |||| |||||||||| || ||| ||||||||||||||| |||||||||||   ||| |||||||||||  |||||||    
T  94991 tttccgacccaccaaatggtgggcgactaatccggctcatgcgtaaaggcatgcgcactggtcaaacgttgtt--tcctagaaatcgaacctggtattcc 95088  T
Q  369 tcagatatgttcttagaaggagtttattgccactagagcccaagcaac 416  Q
     | ||||  ||||| ||||||| |  |||||| | |||||||||||||    
T  95089 ccggatactttcttggaaggagctccttgccattggagcccaagcaac 95136  T

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Target: scaffold0004; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 368
Target Start/End: Original strand, 7843 - 7944
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||| ||||||| ||||| |||| ||||| |||  || |||||||||||||||||||||||  ||| |||||| ||| |||| ||||| |||||    
T  7843 cggtttccgatccaccaaaggtgggcgactaatccagctaatgcgtagaggcatgcgcactggccaagtgtttttccccttgggaatcaaacccggtatt 7942  T
Q  367 cc 368  Q
    ||    
T  7943 cc 7944  T

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Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 314 - 368
Target Start/End: Complemental strand, 72686 - 72632
Alignment:
Q  314 gaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||| |||||||    
T  72686 gaggcatgcgcactggtcaagcgttgttccccttggaaatcgaacccggtattcc 72632  T

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Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 186618 - 186469
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    ||||||||||||||| || | || ||||| ||||||||||||| ||||||||||| |||||| |||||| || ||| |||| ||||||||||||  ||||    
T  186618 cggtttccgacccactaaagatgaacgactaatccggctcgtgcgtagaggcatgtgcactgaccaaacattattctccct-gaaatcgaacccgatatt 186520  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |  || |||  | ||||||||| | |  ||||||||||||| ||| |||||    
T  186519 ctccaaatacatccttagaaggtgctccttgccactagagctcaaccaact 186469  T

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Target: scaffold0011; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 417
Target Start/End: Complemental strand, 224418 - 224268
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtatt 366  Q
    |||||||||||||||||| | |||||||| ||||||||||||| ||||||| ||| ||||||  |||||||| ||| |||||  | ||||||||  ||||    
T  224418 cggtttccgacccaccaaagatggacgactaatccggctcgtgcgtagaggtatgtgcactgatcaaacgttattctccctgagattcgaacccgatatt 224319  T
Q  367 cctcagatatgttcttagaaggagtttattgccactagagcccaagcaact 417  Q
    |  |  ||| || ||||||||  | |  ||||||||||||| |||||||||    
T  224318 ctccgaatacgtccttagaagatgctccttgccactagagctcaagcaact 224268  T

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Target: scaffold0029 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 360
Target Start/End: Complemental strand, 41145 - 41052
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    ||||||||||| |||||| | ||| |||| ||||||||||||| |||||||||||| ||||| ||||  |||||||||| ||  ||||||||||    
T  41145 cggtttccgactcaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcacactgaccaagtgttgttccccttgagaatcgaaccc 41052  T

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Target: scaffold0223 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 368
Target Start/End: Complemental strand, 16983 - 16879
Alignment:
Q  265 catcggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagt 363  Q
    ||||||||||| ||||||||| ||||  |||| |||| |||||||| |||||| ||| ||||||| |||| ||||||| ||||||  ||| ||||||| |    
T  16983 catcggtttccaacccaccaaaggtgagcgactaatctggctcgtgcgtagagacatacgcactgaccaagcgttgtttcccctgagaattgaacccaat 16884  T
Q  364 attcc 368  Q
    |||||    
T  16883 attcc 16879  T

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Target: scaffold0341 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 18703 - 18640
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||| |||||||| |||||| |||| ||||||||||| ||||||||||||| | ||||||||||    
T  18703 aatctggctcgtgcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaaccc 18640  T

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Target: scaffold0079 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 368
Target Start/End: Complemental strand, 8232 - 8175
Alignment:
Q  310 tgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaacccagtattcc 368  Q
    |||||||||||||||||||||||| ||||||| ||| ||| |||||||||| |||||||    
T  8232 tgtagaggcatgcgcactggccaagcgttgtt-cccttgggaatcgaacccggtattcc 8175  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 357
Target Start/End: Complemental strand, 149486 - 149396
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaa 357  Q
    ||||||| ||||||||| |||||| |||| ||||   |||||  |||||||||||| |||||| ||| ||||||||||||||  |||||||    
T  149486 cggtttctgacccaccattggtgggcgactaatctacctcgtacgtagaggcatgcacactggtcaagcgttgttccccctgagaatcgaa 149396  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 51781 - 51739
Alignment:
Q  318 catgcgcactggccaaacgttgttccccctggaaatcgaaccc 360  Q
    |||||||||||||||| |||||||||| |||| ||||||||||    
T  51781 catgcgcactggccaagcgttgttccctctgggaatcgaaccc 51739  T

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Target: scaffold0155 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 347
Target Start/End: Complemental strand, 19356 - 19276
Alignment:
Q  268 cggtttccgacccaccaatggtggacgac-aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttccccct 347  Q
    |||||||||| |||| |||  ||| |||| |||||||||| || |||||||  |||||||| ||||| |||||||||||||    
T  19356 cggtttccgatccactaataatggccgactaatccggctcatgcgtagaggtctgcgcactagccaagcgttgttccccct 19276  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 65190 - 65238
Alignment:
Q  297 aatccggctcgtgtgtagaggcatgcgcactggccaaacgttgttcccc 345  Q
    ||||| |||| || |||||| |||||||||||||||| |||||||||||    
T  65190 aatccagctcatgcgtagagacatgcgcactggccaagcgttgttcccc 65238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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