View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6157_high_35 (Length: 251)
Name: NF6157_high_35
Description: NF6157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6157_high_35 |
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Alignment Details
Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 21658164 - 21657920
Alignment:
| Q |
1 |
atgaatctgagcttatagaagaaaaagtcaaacctacaaagacatcagagtccactctattttatcttgggcaactagaaaaatttctgttaaatggtgc |
100 |
Q |
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| T |
21658164 |
atgaatctgagcttatagaagaaaaagtcaaacctaccaagacatcagagtccactctattttatcttgggcaactagaaaaatttctgttaaatggtgc |
21658065 |
T |
|
| Q |
101 |
ttgatgaattaatatttgacgtatgtaccatttttgttttgttgaagattgctttactatttaaacatagaaataaggaccaagagcaacacctattagc |
200 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21658064 |
ttgatgaattaatatttgacatatgtaccatttttgttttgttgaagattgctttactatttaaacatagaaataaggaccaagagcaacacctattagt |
21657965 |
T |
|
| Q |
201 |
aattgatatgagaatccatttggccttgacttgatcttcatctct |
245 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
21657964 |
aattgatatgagaatccatttgaccttgacttgatcttcatctct |
21657920 |
T |
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