View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6158_high_2 (Length: 338)
Name: NF6158_high_2
Description: NF6158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6158_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 18 - 327
Target Start/End: Complemental strand, 10766157 - 10765847
Alignment:
| Q |
18 |
taacatagattcatctcgacctcagtgtcatctttgtcctagattacaaaatttgtactaatgttacaactgtttctgtgtttgcacttggtcacatggg |
117 |
Q |
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| T |
10766157 |
taacatagattcatctcgacctcagtgtcatctttgtcctagactacaaaatttgtactaatgttacaactgtttctgtgtttgcacttggtcacatggg |
10766058 |
T |
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| Q |
118 |
taacagaaaataattggacaaatatagaaccttacannnnnnnnnnnnnnnnnnnnngtttacacatgtataacaacttatctcttggtcatgtgctact |
217 |
Q |
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| T |
10766057 |
taacagaaaataattggacaaaaatagaaccttacaatttttattttatttttatttgtttacacatgtataacaacttatctcttggtcatgtgctact |
10765958 |
T |
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| Q |
218 |
gtttgctatagactgtgacagggtgagcattcagaaatagaatctcttggataaaaaatcttaattttttgttaaagatagaagacataactgaatag-t |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
10765957 |
gtttgctatagactgtgacagggtgagcattcagaaatagaatctcttggataaaaaatcttaattttttgttaaagatagaagacataactgaatagtt |
10765858 |
T |
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| Q |
317 |
tttgtgagtat |
327 |
Q |
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||||||||||| |
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| T |
10765857 |
tttgtgagtat |
10765847 |
T |
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