View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6158_low_4 (Length: 206)
Name: NF6158_low_4
Description: NF6158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6158_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 4881542 - 4881711
Alignment:
| Q |
17 |
aatctacacttatgaaataagcgattcccaacctcaagatttacaggacaccaaacacgatccgagcttcaccccttccaacaaaacttcccttcttttc |
116 |
Q |
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| T |
4881542 |
aatctacacttacaaaataagcgattcccaacctcaagatttacgggacaccaaacacgatccgagcttcaccccttccaacaaaacttcccttcttttc |
4881641 |
T |
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| Q |
117 |
aagttgtcaggggtaggaagtcttccaaaattaacattgtgccattcaattcttcataattctaatccat |
186 |
Q |
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||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||| |
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| T |
4881642 |
aagttgtcaggggtaggaagtcttccaaaattaacatcgtgtcattcaattcgtcataattctaatccat |
4881711 |
T |
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