View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6159_high_9 (Length: 255)
Name: NF6159_high_9
Description: NF6159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6159_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 19 - 251
Target Start/End: Original strand, 9939846 - 9940078
Alignment:
| Q |
19 |
aatcgatggtgttggtgattgctaccnnnnnnntgtcgataccatacccaacataatagacgagtataatacctctatacttcaacaacaaaattaattt |
118 |
Q |
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| T |
9939846 |
aatcgatggtgttggtgattgctacgaaaaaaatgtcgataccatacccaacataatagacgagtataatacctctatacttcaacaacaaaattaattt |
9939945 |
T |
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| Q |
119 |
taacatttatgtcgttacgatcaagacaacaatagttaaaacatatattagagttgtctaacatcacgtagatgtcttttaaatcaaagctataatactt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
9939946 |
taacatttatgtcgttacgatcaagacaacaatagttaaaacatatattagaattgtctaccatcacgtagatgtcttttaaatcaaagctataatactt |
9940045 |
T |
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| Q |
219 |
actaagaacggagccaccacctcatagtgaggg |
251 |
Q |
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|||||| |||||||||||||||||||||||||| |
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| T |
9940046 |
actaaggacggagccaccacctcatagtgaggg |
9940078 |
T |
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