View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6159_low_8 (Length: 304)
Name: NF6159_low_8
Description: NF6159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6159_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 9 - 289
Target Start/End: Original strand, 26425923 - 26426202
Alignment:
| Q |
9 |
catcactatctccccagatgctgattgttccaagtaaaactcataaattaaattattcacaaatatatatttctttttatgttgatccataatgaatagg |
108 |
Q |
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| T |
26425923 |
catcactatctccccagatgctgattgttccaagtaaaactcataaattaaattattcaaaaatatatatttctttttatgttgatccataatgaatagg |
26426022 |
T |
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| Q |
109 |
acctttgcccctagtagccaccggtataaaaatcgccacaatttagactatttgaatccgctacgagactatatctttaatcggcagtgatacaactgat |
208 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
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| T |
26426023 |
acctttttccctagtagccaccggtataaaaatcgccacaatttagactatttgaatccgctacgagacta-atctttaatcggcagtgatacaacttat |
26426121 |
T |
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| Q |
209 |
taattataggagattgggctgtctatcaattgggcaactttaagaattaaacttggaacttttttagagtatagtcatatt |
289 |
Q |
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| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26426122 |
ttattataggagattggactgtctatcaattgggcaactttaagaattaaacttggaacttttttagagtatagtcatatt |
26426202 |
T |
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