View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6160_low_6 (Length: 258)
Name: NF6160_low_6
Description: NF6160
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6160_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 19 - 235
Target Start/End: Complemental strand, 40572394 - 40572178
Alignment:
| Q |
19 |
ccatcagcaaacctcacaagattttcttgccaatcattcannnnnnnnacttataaaccgaattcatgtacggtggtttctttttggttgttcccctttt |
118 |
Q |
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| T |
40572394 |
ccatcagcaaacctcacaagattttcttgccaatcattcattttttttacttataaaccgaattcatgtacggtggtttctttttggttgttcccctttt |
40572295 |
T |
|
| Q |
119 |
ccatttgccaattctccaatatccatattttgtctttcccatacacaaactccttcaatccaacctatttttacaattctagttttctaatatgcaccac |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |
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| T |
40572294 |
ccatttgccaattctccaatatccatattttgtctttcccatacacaaactccttcaatccaacctatttttaaaattctagctttctaatatgcaccac |
40572195 |
T |
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| Q |
219 |
gtacaatgattgtcttt |
235 |
Q |
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||||||||||||||||| |
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| T |
40572194 |
gtacaatgattgtcttt |
40572178 |
T |
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