View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6162_high_10 (Length: 204)

Name: NF6162_high_10
Description: NF6162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6162_high_10
NF6162_high_10
[»] chr8 (28 HSPs)
chr8 (53-180)||(5033164-5033291)
chr8 (53-179)||(35440978-35441104)
chr8 (53-180)||(33841599-33841726)
chr8 (53-187)||(10086760-10086894)
chr8 (53-180)||(45191135-45191262)
chr8 (53-160)||(8243416-8243523)
chr8 (49-160)||(34229640-34229751)
chr8 (53-180)||(5667100-5667227)
chr8 (53-186)||(43844473-43844604)
chr8 (78-186)||(39850983-39851091)
chr8 (53-180)||(8796425-8796552)
chr8 (78-184)||(6296633-6296739)
chr8 (49-160)||(4958599-4958708)
chr8 (102-160)||(34541831-34541889)
chr8 (53-112)||(5033237-5033296)
chr8 (113-160)||(35031642-35031689)
chr8 (126-180)||(5033169-5033223)
chr8 (53-99)||(5667186-5667232)
chr8 (126-180)||(43844545-43844599)
chr8 (127-180)||(5667105-5667158)
chr8 (54-99)||(10086846-10086891)
chr8 (53-120)||(2581828-2581895)
chr8 (53-112)||(33841594-33841653)
chr8 (53-112)||(35440972-35441031)
chr8 (126-180)||(8243464-8243518)
chr8 (126-180)||(33841667-33841721)
chr8 (126-180)||(35441045-35441099)
chr8 (102-171)||(31159903-31159972)
[»] chr1 (45 HSPs)
chr1 (53-180)||(48993925-48994052)
chr1 (53-186)||(29179599-29179732)
chr1 (49-160)||(9157309-9157420)
chr1 (53-180)||(32540756-32540883)
chr1 (53-184)||(17127568-17127699)
chr1 (53-180)||(5995372-5995499)
chr1 (76-180)||(33219599-33219703)
chr1 (53-160)||(37155049-37155156)
chr1 (43-140)||(36290455-36290552)
chr1 (49-160)||(4608995-4609106)
chr1 (53-150)||(1091582-1091679)
chr1 (46-134)||(44706838-44706926)
chr1 (102-180)||(15220863-15220941)
chr1 (78-180)||(29371396-29371498)
chr1 (57-159)||(45728294-45728396)
chr1 (76-162)||(46333972-46334058)
chr1 (78-180)||(49444921-49445021)
chr1 (107-160)||(1819517-1819570)
chr1 (53-126)||(21630045-21630118)
chr1 (53-160)||(48498418-48498525)
chr1 (78-160)||(5694918-5694999)
chr1 (78-160)||(8337879-8337961)
chr1 (41-121)||(28395628-28395708)
chr1 (93-160)||(741530-741597)
chr1 (78-160)||(34062237-34062319)
chr1 (82-160)||(47303427-47303505)
chr1 (78-160)||(48604975-48605057)
chr1 (53-112)||(48993920-48993979)
chr1 (126-180)||(9157318-9157372)
chr1 (126-176)||(21630054-21630104)
chr1 (126-180)||(45728295-45728349)
chr1 (126-180)||(48993993-48994047)
chr1 (53-160)||(19711208-19711313)
chr1 (108-160)||(28928807-28928859)
chr1 (49-112)||(17127563-17127626)
chr1 (49-112)||(29371444-29371507)
chr1 (53-112)||(49444916-49444975)
chr1 (126-184)||(17127640-17127698)
chr1 (54-112)||(29179601-29179659)
chr1 (126-180)||(29179673-29179727)
chr1 (53-98)||(5995459-5995504)
chr1 (53-98)||(46932000-46932045)
chr1 (53-98)||(46932072-46932116)
chr1 (41-97)||(15220902-15220958)
chr1 (136-180)||(36290493-36290537)
[»] chr4 (40 HSPs)
chr4 (46-180)||(23444277-23444411)
chr4 (53-179)||(51265448-51265574)
chr4 (67-180)||(47661859-47661972)
chr4 (53-180)||(35682169-35682296)
chr4 (53-180)||(6271705-6271832)
chr4 (102-180)||(42375062-42375140)
chr4 (43-176)||(47762601-47762734)
chr4 (53-160)||(26186044-26186149)
chr4 (108-174)||(25818387-25818453)
chr4 (78-180)||(53954638-53954740)
chr4 (53-140)||(30861822-30861909)
chr4 (108-162)||(28693949-28694003)
chr4 (54-180)||(44379934-44380060)
chr4 (78-160)||(55090024-55090106)
chr4 (78-150)||(40789207-40789279)
chr4 (53-100)||(2325068-2325115)
chr4 (41-112)||(47661918-47661989)
chr4 (102-160)||(47404613-47404671)
chr4 (102-160)||(50384133-50384191)
chr4 (108-160)||(31430489-31430541)
chr4 (108-160)||(52028607-52028659)
chr4 (52-112)||(53954686-53954746)
chr4 (41-112)||(23444260-23444331)
chr4 (136-186)||(5048886-5048936)
chr4 (126-180)||(26186090-26186144)
chr4 (47-109)||(44380009-44380071)
chr4 (52-112)||(35682242-35682302)
chr4 (49-84)||(25617980-25618015)
chr4 (53-112)||(42375086-42375145)
chr4 (108-151)||(45591447-45591490)
chr4 (53-115)||(3862619-3862681)
chr4 (126-180)||(3862622-3862676)
chr4 (53-115)||(3871376-3871438)
chr4 (126-180)||(3871379-3871433)
chr4 (126-180)||(23444345-23444399)
chr4 (53-99)||(30709989-30710035)
chr4 (126-180)||(51265453-51265507)
chr4 (111-160)||(24006098-24006147)
chr4 (41-78)||(54716349-54716386)
chr4 (68-160)||(31532717-31532809)
[»] chr7 (27 HSPs)
chr7 (53-180)||(11016872-11016999)
chr7 (53-180)||(38975808-38975935)
chr7 (53-160)||(41018256-41018363)
chr7 (56-169)||(15027548-15027661)
chr7 (53-176)||(4290548-4290671)
chr7 (78-180)||(42628323-42628425)
chr7 (53-130)||(45231908-45231985)
chr7 (113-177)||(48000705-48000769)
chr7 (108-180)||(48000795-48000867)
chr7 (53-160)||(34854723-34854830)
chr7 (47-134)||(30217508-30217594)
chr7 (78-160)||(4649348-4649432)
chr7 (53-150)||(27028831-27028928)
chr7 (113-171)||(6225542-6225600)
chr7 (78-148)||(10419486-10419556)
chr7 (53-99)||(11016958-11017004)
chr7 (68-134)||(22764754-22764820)
chr7 (78-150)||(7671949-7672021)
chr7 (141-180)||(34854786-34854825)
chr7 (141-180)||(41018319-41018358)
chr7 (117-160)||(41084208-41084251)
chr7 (53-112)||(42628371-42628430)
chr7 (126-180)||(11016877-11016931)
chr7 (78-160)||(29053342-29053424)
chr7 (126-180)||(38975813-38975867)
chr7 (56-98)||(48000827-48000869)
chr7 (53-98)||(38975895-38975940)
[»] chr5 (36 HSPs)
chr5 (53-184)||(291100-291231)
chr5 (49-180)||(12913802-12913933)
chr5 (53-180)||(19655161-19655288)
chr5 (78-180)||(16971172-16971274)
chr5 (78-179)||(3899867-3899968)
chr5 (67-180)||(29699384-29699497)
chr5 (102-180)||(2953242-2953320)
chr5 (58-160)||(16439146-16439248)
chr5 (107-180)||(2093945-2094018)
chr5 (78-179)||(26662427-26662529)
chr5 (78-179)||(26934022-26934124)
chr5 (78-180)||(28818945-28819047)
chr5 (54-184)||(30117832-30117962)
chr5 (49-160)||(3180088-3180198)
chr5 (78-160)||(16802472-16802554)
chr5 (131-178)||(32485630-32485677)
chr5 (131-180)||(13312272-13312321)
chr5 (53-134)||(19598335-19598416)
chr5 (126-186)||(16439140-16439200)
chr5 (53-112)||(16971220-16971279)
chr5 (53-99)||(13312267-13312313)
chr5 (126-180)||(19598340-19598394)
chr5 (76-150)||(38134411-38134485)
chr5 (88-180)||(2356312-2356401)
chr5 (43-140)||(39031199-39031296)
chr5 (137-186)||(39031238-39031287)
chr5 (102-186)||(228402-228486)
chr5 (53-112)||(2953266-2953325)
chr5 (53-112)||(3899915-3899974)
chr5 (123-174)||(7009401-7009452)
chr5 (127-192)||(291092-291158)
chr5 (46-99)||(12913892-12913945)
chr5 (151-200)||(39777039-39777088)
chr5 (126-174)||(17849221-17849269)
chr5 (53-97)||(22083001-22083045)
chr5 (12-44)||(39777089-39777121)
[»] chr3 (25 HSPs)
chr3 (53-180)||(30734410-30734537)
chr3 (49-160)||(33689175-33689286)
chr3 (53-174)||(47492061-47492182)
chr3 (53-186)||(51046075-51046208)
chr3 (53-180)||(41752967-41753094)
chr3 (46-160)||(43139737-43139851)
chr3 (54-180)||(50524706-50524832)
chr3 (49-156)||(55223231-55223338)
chr3 (78-180)||(1801454-1801556)
chr3 (67-160)||(50549992-50550085)
chr3 (117-180)||(45103117-45103180)
chr3 (49-112)||(30734401-30734464)
chr3 (78-160)||(30476502-30476584)
chr3 (54-180)||(30580764-30580890)
chr3 (78-160)||(47677283-47677365)
chr3 (88-156)||(29031746-29031814)
chr3 (102-174)||(30904296-30904368)
chr3 (56-162)||(18321657-18321763)
chr3 (126-180)||(33689184-33689238)
chr3 (78-130)||(39385746-39385798)
chr3 (126-192)||(50549970-50550037)
chr3 (53-98)||(1801449-1801494)
chr3 (136-180)||(18321659-18321703)
chr3 (126-186)||(30580832-30580892)
chr3 (49-77)||(47677263-47677291)
[»] scaffold0586 (1 HSPs)
scaffold0586 (49-180)||(7055-7185)
[»] chr2 (26 HSPs)
chr2 (53-180)||(16514427-16514554)
chr2 (53-180)||(29508698-29508826)
chr2 (88-180)||(14229361-14229453)
chr2 (78-180)||(38933615-38933717)
chr2 (69-180)||(6721970-6722081)
chr2 (78-180)||(6217232-6217334)
chr2 (87-180)||(14470600-14470693)
chr2 (68-163)||(8534164-8534259)
chr2 (49-180)||(24115919-24116050)
chr2 (49-112)||(14470591-14470654)
chr2 (67-160)||(15011297-15011390)
chr2 (78-162)||(2893991-2894075)
chr2 (108-180)||(14892318-14892390)
chr2 (108-180)||(37961764-37961836)
chr2 (49-96)||(45213892-45213939)
chr2 (78-160)||(2828612-2828694)
chr2 (41-109)||(14892339-14892407)
chr2 (78-178)||(29925580-29925680)
chr2 (125-185)||(33018620-33018680)
chr2 (61-160)||(37762029-37762128)
chr2 (142-180)||(45213892-45213930)
chr2 (126-174)||(6721965-6722013)
chr2 (53-112)||(16514500-16514559)
chr2 (53-96)||(29508693-29508736)
chr2 (53-98)||(6217227-6217272)
chr2 (53-134)||(9173035-9173116)
[»] scaffold0016 (2 HSPs)
scaffold0016 (78-180)||(49711-49813)
scaffold0016 (53-112)||(49706-49765)
[»] chr6 (14 HSPs)
chr6 (78-180)||(24618609-24618711)
chr6 (49-180)||(17750902-17751032)
chr6 (102-180)||(12343152-12343230)
chr6 (46-160)||(551193-551307)
chr6 (102-180)||(13043509-13043587)
chr6 (53-147)||(24587464-24587558)
chr6 (78-160)||(10521877-10521959)
chr6 (126-180)||(24587469-24587523)
chr6 (111-160)||(2315332-2315381)
chr6 (78-135)||(31654333-31654390)
chr6 (49-112)||(17750978-17751041)
chr6 (125-180)||(24975760-24975815)
chr6 (53-99)||(24618604-24618650)
chr6 (124-184)||(7384492-7384552)
[»] scaffold0180 (2 HSPs)
scaffold0180 (108-180)||(19130-19202)
scaffold0180 (47-112)||(19119-19184)
[»] scaffold0161 (1 HSPs)
scaffold0161 (53-180)||(27228-27355)
[»] scaffold1033 (1 HSPs)
scaffold1033 (102-159)||(2265-2322)
[»] scaffold1029 (1 HSPs)
scaffold1029 (102-159)||(2265-2322)
[»] scaffold0536 (1 HSPs)
scaffold0536 (67-171)||(4909-5010)
[»] scaffold0047 (1 HSPs)
scaffold0047 (78-160)||(63785-63867)
[»] scaffold0481 (1 HSPs)
scaffold0481 (108-156)||(2919-2967)


Alignment Details
Target: chr8 (Bit Score: 84; Significance: 4e-40; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 5033164 - 5033291
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||||||| |    
T  5033164 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 5033263  T
Q  153 caatgtcatcaatgtcacccaactctat 180  Q
    |||||||| |||||||||||||||||||    
T  5033264 caatgtcaccaatgtcacccaactctat 5033291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 35441104 - 35440978
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||||||| |    
T  35441104 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 35441005  T
Q  153 caatgtcatcaatgtcacccaactcta 179  Q
    |||||||| ||||||||||||||||||    
T  35441004 caatgtcaccaatgtcacccaactcta 35440978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 33841726 - 33841599
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| |||||||||| |||||||||||||| | ||||   |||| |||||||||||||||||||||||||||| |||| | |||||||| |    
T  33841726 gtgacatagagttgggtgacattggtgacattgaccaatcagaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacaatgtgattggt 33841627  T
Q  153 caatgtcatcaatgtcacccaactctat 180  Q
    |||||||| |||||||||||||||||||    
T  33841626 caatgtcaccaatgtcacccaactctat 33841599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 53 - 187
Target Start/End: Original strand, 10086760 - 10086894
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    |||||||||| || |||||||||  ||||||||  |||| |||||||   |||  ||||||||||||||||||||||| ||| |||| |||||||||| |    
T  10086760 gtgacatagaattgggtgacattagtgacattggtcaatcacaatgtcataatgtttgtgtttctctctctttcacaaacattgtgacattgtgattggt 10086859  T
Q  153 caatgtcatcaatgtcacccaactctatatcatca 187  Q
    |||||||| ||||||||||||||||||| ||||||    
T  10086860 caatgtcaccaatgtcacccaactctatgtcatca 10086894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 45191262 - 45191135
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| | ||| |||| |||||||||||||| | |||||| ||||  |||||||||||||||||||| |||||| |||  ||||||||| ||    
T  45191262 gtgacatagagttggatgatattggtgacattgaccaatcaaaatgttacaatgtttgtgtttctctctctttcataagcattgtggcattgtgattaat 45191163  T
Q  153 caatgtcatcaatgtcacccaactctat 180  Q
    |||||||| |||| ||| ||||||||||    
T  45191162 caatgtcaccaatatcatccaactctat 45191135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 53 - 160
Target Start/End: Complemental strand, 8243523 - 8243416
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| |||||||||| |||| |||  |||| ||||||   |||| |||||||||||||||||||||||||||| |||  ||||||||||||    
T  8243523 gtgacatagagttgggtgacattggtgacgttggtcaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtggcattgtgattgat 8243424  T
Q  153 caatgtca 160  Q
    ||||||||    
T  8243423 caatgtca 8243416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 49 - 160
Target Start/End: Original strand, 34229640 - 34229751
Alignment:
Q  49 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 148  Q
    ||||||||||||||||| |||||||||  ||||||    |||| |||||||   ||| |||||||||||||||||||||||||||| |||||||||||||    
T  34229640 ttgtgtgacatagagttgggtgacattagtgacatgagtcaatcacaatgtcagaatgcttgtgtttctctctctttcacaagcattgtgatattgtgat 34229739  T
Q  149 tgatcaatgtca 160  Q
    ||| ||||||||    
T  34229740 tgaccaatgtca 34229751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 5667100 - 5667227
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| | |||||||| ||||||||  |||| |||||||  |||| ||||| ||||||||||||||||||||||  ||| ||||| ||||      
T  5667100 gtgacatagagttggatgacattggtgacattggtcaatcacaatgtcacaatgcttgtatttctctctctttcacaagcattatgacattgtaattggc 5667199  T
Q  153 caatgtcatcaatgtcacccaactctat 180  Q
    |||||||| |||||||| | ||||||||    
T  5667200 caatgtcaccaatgtcatcaaactctat 5667227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 53 - 186
Target Start/End: Complemental strand, 43844604 - 43844473
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| | |||||||| ||| ||||| |||| |||||||  |||| ||||||||||||||||  ||||||||||  ||| ||| ||||| |     
T  43844604 gtgacatagagttggatgacattggtgatattgatcaatcacaatgtcacaatgcttgtgtttctctctc--tcacaagcatcctgacattatgattaac 43844507  T
Q  153 caatgtcatcaatgtcacccaactctatatcatc 186  Q
    |||| |||||||| |||||||||||||| |||||    
T  43844506 caatatcatcaatatcacccaactctatgtcatc 43844473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 78 - 186
Target Start/End: Original strand, 39850983 - 39851091
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 177  Q
    |||||||| ||||| ||||||   ||||  |||||||||||||||||||||||||||  | |||||||||||| ||||||||| ||||||||| |||||     
T  39850983 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattataatattgtgattggtcaatgtcaccaatgtcactcaactt 39851082  T
Q  178 tatatcatc 186  Q
    ||| |||||    
T  39851083 tatgtcatc 39851091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 8796425 - 8796552
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| ||||| |||  ||| ||||  |||| |||||||  |||| ||||||||||||| |||||||||||||| |||| ||| |||||| |    
T  8796425 gtgacatagagttaggtgatatttgtgatattggtcaatcacaatgtcacaatgcttgtgtttctctatctttcacaagcattgtgacattttgattggt 8796524  T
Q  153 caatgtcatcaatgtcacccaactctat 180  Q
    |||||||| |||| ||||| | ||||||    
T  8796525 caatgtcaccaatatcacctagctctat 8796552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 78 - 184
Target Start/End: Original strand, 6296633 - 6296739
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 177  Q
    |||||||||||||| |||||||   ||| ||||||||||||||||||||||||| || |||| ||| | |||||  |||||||  ||||||| |||||||    
T  6296633 tgacattgaccaatcacaatgtcataatgcttgtgtttctctctctttcacaagtattgtgacattataattgactaatgtcactaatgtcatccaactc 6296732  T
Q  178 tatatca 184  Q
    |||||||    
T  6296733 tatatca 6296739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 49 - 160
Target Start/End: Original strand, 4958599 - 4958708
Alignment:
Q  49 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 148  Q
    |||||||||||||| |||| ||| ||||||||||||| ||||| |||||||   |||  |||||||||||||||||||||||| || ||||  |||||||    
T  4958599 ttgtgtgacatagaatttg-tgatattgatgacattggccaatcacaatgtcataatgtttgtgtttctctctctttcacaagtattgtga-cttgtgat 4958696  T
Q  149 tgatcaatgtca 160  Q
    || |||||||||    
T  4958697 tggtcaatgtca 4958708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 34541889 - 34541831
Alignment:
Q  102 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||||  ||||||||    
T  34541889 caatgcttgtgtttctctctctttcacaagcattgtgatattatgattggccaatgtca 34541831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 5033296 - 5033237
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  5033296 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 5033237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 160
Target Start/End: Complemental strand, 35031689 - 35031642
Alignment:
Q  113 tttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    |||||||||||||||||||||| | || ||||||||||||||||||||    
T  35031689 tttctctctctttcacaagcattgcgacattgtgattgatcaatgtca 35031642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 5033223 - 5033169
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||| |||  |||||||||| ||||||||| |||||||||||||||||||    
T  5033223 cacaagcattgtggcattgtgattggtcaatgtcaccaatgtcacccaactctat 5033169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 5667232 - 5667186
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgt 99  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||||    
T  5667232 gtgacatagagtttgatgacattggtgacattggccaattacaatgt 5667186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 43844545 - 43844599
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||| |||| |||||||||||||||| ||| |||||||| ||||||||||    
T  43844545 cacaagcattgtgacattgtgattgatcaatatcaccaatgtcatccaactctat 43844599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 5667158 - 5667105
Alignment:
Q  127 acaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    |||||||| |||| ||||||||||| |||||||| |||||||| ||||||||||    
T  5667158 acaagcattgtgacattgtgattgaccaatgtcaccaatgtcatccaactctat 5667105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 99
Target Start/End: Complemental strand, 10086891 - 10086846
Alignment:
Q  54 tgacatagagtttggtgacattgatgacattgaccaattacaatgt 99  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||    
T  10086891 tgacatagagttgggtgacattggtgacattgaccaatcacaatgt 10086846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 2581828 - 2581895
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctc 120  Q
    |||||||||| || |||||||||| |||||||| ||||| ||||||   |||| ||||||||||||||    
T  2581828 gtgacatagaattgggtgacattgttgacattggccaatcacaatgccacaatgcttgtgtttctctc 2581895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 33841594 - 33841653
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    ||||||||||||| |||||||||| |||||||||||||| ||| |||  |||| ||||||    
T  33841594 gtgacatagagttgggtgacattggtgacattgaccaatcacattgtcacaatgcttgtg 33841653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 35440972 - 35441031
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    ||||| ||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  35440972 gtgacttagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 35441031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 8243464 - 8243518
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||| |||  ||||||||||| ||| |||| |||||||||||||||||||    
T  8243464 cacaagcattgtggcattgtgattgaccaacgtcaccaatgtcacccaactctat 8243518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 33841667 - 33841721
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||| |||  ||| |||||| ||||||||| |||||||||||||||||||    
T  33841667 cacaagcattgtggcattctgattggtcaatgtcaccaatgtcacccaactctat 33841721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 35441045 - 35441099
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||| |||  ||||||||||  |||||||| |||||||||||||||||||    
T  35441045 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctat 35441099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 31159903 - 31159972
Alignment:
Q  102 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacc 171  Q
    ||||| || |||||||||||||||||||||||| |||| ||| ||||||   ||||||| |||| |||||    
T  31159903 caatatttttgtttctctctctttcacaagcattgtgacattatgattggcgaatgtcaccaatatcacc 31159972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 4e-40; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 48994052 - 48993925
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||||||| |    
T  48994052 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 48993953  T
Q  153 caatgtcatcaatgtcacccaactctat 180  Q
    |||||||| |||||||||||||||||||    
T  48993952 caatgtcaccaatgtcacccaactctat 48993925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 186
Target Start/End: Complemental strand, 29179732 - 29179599
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||||||| |    
T  29179732 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 29179633  T
Q  153 caatgtcatcaatgtcacccaactctatatcatc 186  Q
    || ||||| ||||||||||||||||||| |||||    
T  29179632 cagtgtcaccaatgtcacccaactctatgtcatc 29179599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 49 - 160
Target Start/End: Original strand, 9157309 - 9157420
Alignment:
Q  49 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 148  Q
    ||||||||||||||||| |||||||||| | |||||||||||| |||||||  |||| |||||||||||||||||||| ||||||| |||||||||||||    
T  9157309 ttgtgtgacatagagttgggtgacattggtaacattgaccaatcacaatgtcacaatgcttgtgtttctctctctttctcaagcattgtgatattgtgat 9157408  T
Q  149 tgatcaatgtca 160  Q
    ||||||||||||    
T  9157409 tgatcaatgtca 9157420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 32540883 - 32540756
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    |||||||||| || | |||||||| |||||||||||||| |||||||| |||| |||||||||||||||||||||||||||| |||| ||||||||||      
T  32540883 gtgacatagaattggatgacattggtgacattgaccaatcacaatgttacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggc 32540784  T
Q  153 caatgtcatcaatgtcacccaactctat 180  Q
    ||||| || |||||||||||||||||||    
T  32540783 caatgccaccaatgtcacccaactctat 32540756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 17127699 - 17127568
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    |||| |||||||| |||||||||  |||||||||||||| | |||||  |||| |||||||||||||||||||||||||||| |||| |||||||||| |    
T  17127699 gtgatatagagttaggtgacattagtgacattgaccaatcaaaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 17127600  T
Q  153 caatgtcatcaatgtcacccaactctatatca 184  Q
    ||||||||  ||||||||| ||||||||||||    
T  17127599 caatgtcactaatgtcacctaactctatatca 17127568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 5995372 - 5995499
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||||| |||||||| | |||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||  |||||||||| |    
T  5995372 gtgacatagagtttgatgacattggtaacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtggcattgtgattggt 5995471  T
Q  153 caatgtcatcaatgtcacccaactctat 180  Q
    |||||||| |||||||| ||||||||||    
T  5995472 caatgtcaccaatgtcatccaactctat 5995499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 76 - 180
Target Start/End: Original strand, 33219599 - 33219703
Alignment:
Q  76 gatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaac 175  Q
    ||||||||||| |||| |||||||| |||| ||||||||| ||||||||||||||||||  ||| |||||||||||||||||||| |||||||| |||||    
T  33219599 gatgacattgatcaatcacaatgttacaatgcttgtgtttttctctctttcacaagcattatgacattgtgattgatcaatgtcaccaatgtcatccaac 33219698  T
Q  176 tctat 180  Q
    |||||    
T  33219699 tctat 33219703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 37155049 - 37155156
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||  |||| ||||||||||||||||||||||||| || |||| ||||||||||      
T  37155049 gtgacatagagtttggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgtttctctctctttcacaagtattgtgacattgtgattggc 37155148  T
Q  153 caatgtca 160  Q
    ||||||||    
T  37155149 caatgtca 37155156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 36290552 - 36290455
Alignment:
Q  43 tagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgat 140  Q
    ||||| ||| ||||||||||||| |||||||||| || ||||||||||| |||||||  ||||| ||||||||||||||||||||||||||| |||||    
T  36290552 tagtacttgggtgacatagagttgggtgacattggtggcattgaccaatcacaatgtcacaatatttgtgtttctctctctttcacaagcattgtgat 36290455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 49 - 160
Target Start/End: Original strand, 4608995 - 4609106
Alignment:
Q  49 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 148  Q
    |||||||| || ||||| |||||||| | ||||||||||| || |||||||  ||||  ||||||||||||||||||||||||||| |||| ||||||||    
T  4608995 ttgtgtgatatggagttgggtgacatcggtgacattgacccatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgat 4609094  T
Q  149 tgatcaatgtca 160  Q
    ||| ||||||||    
T  4609095 tgaccaatgtca 4609106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 1091679 - 1091582
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattg 150  Q
    ||||||||||||| ||||| |||| |||| ||||||||| |||||||  ||||  ||||||||||||||||||||||||||| |||| ||||||||||    
T  1091679 gtgacatagagttgggtgatattggtgactttgaccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattg 1091582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 44706926 - 44706838
Alignment:
Q  46 tatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 134  Q
    |||||| ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| ||||||||||||||||||||||||||||    
T  44706926 tatttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccgcaatgcttgtgtttctctctctttcacaagcat 44706838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 15220863 - 15220941
Alignment:
Q  102 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||||||  |||| ||| |||||||||||||||||||    
T  15220863 caatgcttgtgtttctctctctttcacaagcattgtgagattgtgattggccaatatcaccaatgtcacccaactctat 15220941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 180
Target Start/End: Original strand, 29371396 - 29371498
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 177  Q
    |||||||| ||||| |||||||  ||||  ||||||||||||||||||||||||||| |||| |||||||||| ||||| ||| |||||||||| | |||    
T  29371396 tgacattggccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaatatcaccaatgtcacctagctc 29371495  T
Q  178 tat 180  Q
    |||    
T  29371496 tat 29371498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 159
Target Start/End: Original strand, 45728294 - 45728396
Alignment:
Q  57 catagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaat 156  Q
    ||||||||| ||||| |||| ||| |||||||||| ||||| |  |||| ||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  45728294 catagagttgggtgatattggtgatattgaccaatcacaatatcacaatgcttgtgtttctctctctttcacaagcattatgacattgtgattgaccaat 45728393  T
Q  157 gtc 159  Q
    |||    
T  45728394 gtc 45728396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 76 - 162
Target Start/End: Complemental strand, 46334058 - 46333972
Alignment:
Q  76 gatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatc 162  Q
    |||||||||||||||| |||||||  |||| ||||||||| |||||||||||||||||| |||| ||||||||||  ||||||||||    
T  46334058 gatgacattgaccaatcacaatgtcacaatgcttgtgtttttctctctttcacaagcattgtgacattgtgattggccaatgtcatc 46333972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 180
Target Start/End: Complemental strand, 49445021 - 49444921
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 177  Q
    |||||||| ||||| ||||||   |||| |||||||||||||||||  ||||||||| || | ||||||||||||| |||||| ||||||||||||||||    
T  49445021 tgacattggccaatcacaatgccacaatgcttgtgtttctctctct--cacaagcattgtaacattgtgattgatcgatgtcaccaatgtcacccaactc 49444924  T
Q  178 tat 180  Q
    |||    
T  49444923 tat 49444921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 1819570 - 1819517
Alignment:
Q  107 cttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  1819570 cttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatgtca 1819517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 21630045 - 21630118
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttc 126  Q
    |||||||| |||| |||||||||| |||||||||||||| |||||||  |||| ||||||||||||||||||||    
T  21630045 gtgacataaagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgtttctctctctttc 21630118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 48498418 - 48498525
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| |||||||||  ||||||||  |||| | |||    ||||  |||||||||||||||||||||||||||||| | |||||||||| |    
T  48498418 gtgacatagagttgggtgacatttgtgacattggtcaatcataataccacaatgtttgtgtttctctctctttcacaagcatggtaacattgtgattggt 48498517  T
Q  153 caatgtca 160  Q
    ||||||||    
T  48498518 caatgtca 48498525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 5694999 - 5694918
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    ||||||||  ||||||||||||  ||||| |||||||||||||||||||||||||||  | ||||||||||||| ||||||||    
T  5694999 tgacattggtcaattacaatgtcacaatatttgtgtttctctctctttcacaagcat-ttaatattgtgattgaccaatgtca 5694918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 8337961 - 8337879
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    |||||||||||||| ||||||   ||||  ||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||    
T  8337961 tgacattgaccaatcacaatgccacaatgtttgtgtttctctctctttcacaaacattgtgacattgtgattgaccaatgtca 8337879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 28395628 - 28395708
Alignment:
Q  41 ggtagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctct 121  Q
    ||||| ||||| || ||||||||||  ||||||||| |||||||||||||| |||||||  |||| |||||||||||||||    
T  28395628 ggtagcatttgggtaacatagagttgagtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgtttctctct 28395708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 741597 - 741530
Alignment:
Q  93 acaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    |||||||  |||| |||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  741597 acaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgggcaatgtca 741530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 34062237 - 34062319
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    |||||||| ||||| ||||||   |||| ||| |||||||||||||||||||| ||| |||| |||||||||| |||||||||    
T  34062237 tgacattggccaatcacaatgccacaatgcttatgtttctctctctttcacaaacattgtgacattgtgattggtcaatgtca 34062319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 47303427 - 47303505
Alignment:
Q  82 attgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    |||||||||| |||||||   |||  ||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||    
T  47303427 attgaccaatcacaatgtcataatgtttgtgtttctctctctttcacaaacattgtgacattgtgattgaccaatgtca 47303505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 48605057 - 48604975
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    |||||||| ||||||| |||||  |||| |||| |||||||||||||||||||  || |||| ||||||||||| ||||||||    
T  48605057 tgacattggccaattataatgtcacaatgcttgcgtttctctctctttcacaaatattgtgacattgtgattgaccaatgtca 48604975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 48993920 - 48993979
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  48993920 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 48993979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 9157372 - 9157318
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||| |||| |||||||||| ||||||| | |||||||||||||||||||    
T  9157372 cacaagcattgtgacattgtgattggtcaatgttaccaatgtcacccaactctat 9157318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 21630104 - 21630054
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaact 176  Q
    ||||||||| |||| |||||||||| ||||||||| |||||||||||||||    
T  21630104 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaact 21630054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 45728349 - 45728295
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||| ||||||||||||||| ||||| ||| |||| ||||||||||||||    
T  45728349 cacaagcattgtgatattgtgattggtcaatatcaccaatatcacccaactctat 45728295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 48993993 - 48994047
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||| |||  |||||||||| ||||||||| |||||||||||||||||||    
T  48993993 cacaagcattgtggcattgtgattggtcaatgtcaccaatgtcacccaactctat 48994047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 160
Target Start/End: Complemental strand, 19711313 - 19711208
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    |||| ||| ||||||||||||||| | |||||| |  ||||||||||  |||| ||| |||||||  |||||||||| |||| || | |||||||||| |    
T  19711313 gtgatataaagtttggtgacattggtaacattggctgattacaatgtcacaattcttatgtttct--ctctttcacatgcattgtaacattgtgattggt 19711216  T
Q  153 caatgtca 160  Q
    ||||||||    
T  19711215 caatgtca 19711208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 28928859 - 28928807
Alignment:
Q  108 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    ||||||||||||||||||||||||||  |||| ||||||||||  ||||||||    
T  28928859 ttgtgtttctctctctttcacaagcactgtgacattgtgattggccaatgtca 28928807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 17127563 - 17127626
Alignment:
Q  49 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    |||||||| |||||||| |||||||||  |||||||||||||| |||||||  |||| ||||||    
T  17127563 ttgtgtgatatagagttaggtgacattagtgacattgaccaatcacaatgtcacaatgcttgtg 17127626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 112
Target Start/End: Complemental strand, 29371507 - 29371444
Alignment:
Q  49 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    ||||||||||||||| | |||||||||| ||| |||||||||| |||||||  |||| ||||||    
T  29371507 ttgtgtgacatagagctaggtgacattggtgatattgaccaatcacaatgtcacaatgcttgtg 29371444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 49444916 - 49444975
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    ||||||||||||| |||||||||| |||||| || |||| |||||||| |||| ||||||    
T  49444916 gtgacatagagttgggtgacattggtgacatcgatcaatcacaatgttacaatgcttgtg 49444975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 17127640 - 17127698
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatca 184  Q
    ||||||||| |||| ||| |||||| |||||||||  ||||||||| ||||||||||||    
T  17127640 cacaagcattgtgacattttgattggtcaatgtcactaatgtcacctaactctatatca 17127698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 112
Target Start/End: Original strand, 29179601 - 29179659
Alignment:
Q  54 tgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    |||||||||||| |||||||||| ||||| |||||||| |||||||  |||| ||||||    
T  29179601 tgacatagagttgggtgacattggtgacactgaccaatcacaatgtcacaatgcttgtg 29179659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 29179673 - 29179727
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||| |||  ||||||||||  |||||||| |||||||||||||||||||    
T  29179673 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctat 29179727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 5995504 - 5995459
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 98  Q
    ||||||||||||| | |||||||| |||||||||||||| ||||||    
T  5995504 gtgacatagagttggatgacattggtgacattgaccaatcacaatg 5995459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 46932000 - 46932045
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 98  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||    
T  46932000 gtgacatagagttgggtgacattggtgacattggccaatcacaatg 46932045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 46932116 - 46932072
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 98  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||    
T  46932116 gtgacatagagtt-ggtgacattggtgacattgaccaatcacaatg 46932072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 15220958 - 15220902
Alignment:
Q  41 ggtagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaat 97  Q
    ||||| ||||| ||||||||||||| |||||||||| ||| |||| ||||| |||||    
T  15220958 ggtagcatttgggtgacatagagttgggtgacattggtgatattggccaatcacaat 15220902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 36290493 - 36290537
Alignment:
Q  136 gtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    |||| |||||||||| |||||| || |||||||||||||||||||    
T  36290493 gtgacattgtgattggtcaatgccaccaatgtcacccaactctat 36290537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 46 - 180
Target Start/End: Complemental strand, 23444411 - 23444277
Alignment:
Q  46 tatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgt 145  Q
    |||||| ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||    
T  23444411 tatttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgt 23444312  T
Q  146 gattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||| ||||||||| |||||||||||||||||||    
T  23444311 gattggtcaatgtcaccaatgtcacccaactctat 23444277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 51265448 - 51265574
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| ||| |||||| |    
T  51265448 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattatgattggt 51265547  T
Q  153 caatgtcatcaatgtcacccaactcta 179  Q
    |||||||| ||||||||||||||||||    
T  51265548 caatgtcaccaatgtcacccaactcta 51265574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 47661859 - 47661972
Alignment:
Q  67 ggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatg 166  Q
    |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||||||| ||||||||| |||||    
T  47661859 ggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaatgtcaccaatg 47661958  T
Q  167 tcacccaactctat 180  Q
    ||||||||||||||    
T  47661959 tcacccaactctat 47661972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 35682169 - 35682296
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| ||||| |||| |||||||| ||||| |||||||   ||||||||||||||||| |||||||||||||| |||| |||||||| | |    
T  35682169 gtgacatagagttaggtgatattggtgacattggccaatcacaatgtcataatacttgtgtttctctatctttcacaagcattgtgacattgtgatcggt 35682268  T
Q  153 caatgtcatcaatgtcacccaactctat 180  Q
    |||||||| |||||||||| ||||||||    
T  35682269 caatgtcaccaatgtcacctaactctat 35682296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 6271705 - 6271832
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| ||||| |||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| ||||||||||      
T  6271705 gtgacatagagttgggtgatattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggc 6271804  T
Q  153 caatgtcatcaatgtcacccaactctat 180  Q
    |||||||| |||| |||| |||||||||    
T  6271805 caatgtcaccaatatcactcaactctat 6271832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 42375062 - 42375140
Alignment:
Q  102 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    |||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  42375062 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatgtcaccaatgtcacccaactctat 42375140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 43 - 176
Target Start/End: Original strand, 47762601 - 47762734
Alignment:
Q  43 tagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatat 142  Q
    ||||||||| ||||||||||| |  |||| |||  |||||||||||||| |||||||| ||||  || |||||||||||||||||||||||| |||| ||    
T  47762601 tagtatttgggtgacatagagctgagtgatatttgtgacattgaccaatcacaatgttacaatgtttatgtttctctctctttcacaagcattgtgacat 47762700  T
Q  143 tgtgattgatcaatgtcatcaatgtcacccaact 176  Q
    | || |||| |||||||| |||| ||| ||||||    
T  47762701 tatggttgaccaatgtcaccaatatcatccaact 47762734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 53 - 160
Target Start/End: Complemental strand, 26186149 - 26186044
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| ||| ||||||||||||||| ||||| ||||| |  |||| |||||||||||  ||||||||||||||| |||| |||||||||||     
T  26186149 gtgacatagagttgggtaacattgatgacattggccaatcacaatttcacaatgcttgtgtttct--ctctttcacaagcattgtgacattgtgattgac 26186052  T
Q  153 caatgtca 160  Q
    ||||||||    
T  26186051 caatgtca 26186044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 25818453 - 25818387
Alignment:
Q  108 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaa 174  Q
    ||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||||||||||||||||    
T  25818453 ttgtgtttctctctctttcacaatcattgtgacattgtgattgaccaatgtcatcaatgtcacccaa 25818387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 180
Target Start/End: Original strand, 53954638 - 53954740
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 177  Q
    |||||||| ||||| |||||||  |||| || ||||||||| ||||||||||||||| |||| ||||| ||||  |||||||| ||||||||||||||||    
T  53954638 tgacattggccaatcacaatgtcacaatgctagtgtttctcactctttcacaagcattgtgacattgtaattggacaatgtcaccaatgtcacccaactc 53954737  T
Q  178 tat 180  Q
    |||    
T  53954738 tat 53954740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 30861909 - 30861822
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgat 140  Q
    ||||||||||||| | ||| |||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||||    
T  30861909 gtgacatagagttggatgatattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgat 30861822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 28694003 - 28693949
Alignment:
Q  108 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatc 162  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||    
T  28694003 ttgtgtttctctctctttcacaaacattgtgatattgtgattggtcaatgtcatc 28693949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 44379934 - 44380060
Alignment:
Q  54 tgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatc 153  Q
    ||||||||||||  |||||||||  ||||||| ||||||| |||||  |||| |||| |||||||||| ||| | ||| || || | |||||||||| ||    
T  44379934 tgacatagagttgagtgacattggcgacattggccaattataatgtcacaatgcttgcgtttctctctattttataagtattgtaacattgtgattggtc 44380033  T
Q  154 aatgtcatcaatgtcacccaactctat 180  Q
    ||| ||| ||||||||| |||||||||    
T  44380034 aatatcaccaatgtcactcaactctat 44380060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 55090106 - 55090024
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    ||||||||  |||| |||||||  |||| ||||||| |||||||||||||||||||| |||| ||||||||||| ||||||||    
T  55090106 tgacattggtcaatcacaatgtcacaatgcttgtgtctctctctctttcacaagcattgtgacattgtgattgaccaatgtca 55090024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 40789207 - 40789279
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattg 150  Q
    |||||||| ||||| |||||||  ||||  ||||||||||||||||||||||||||| |||| ||||||||||    
T  40789207 tgacattggccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattg 40789279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 2325115 - 2325068
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgtt 100  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  2325115 gtgacatagagtttggtgacattgatgacattgacaaatcacaatgtt 2325068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 47661989 - 47661918
Alignment:
Q  41 ggtagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    ||||| ||||| ||||||||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  47661989 ggtagcatttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 47661918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 47404671 - 47404613
Alignment:
Q  102 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    |||| |||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  47404671 caatgcttgggtttctctctctttcacaagcattgtgacattgtgattgaccaatgtca 47404613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 50384191 - 50384133
Alignment:
Q  102 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  50384191 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtca 50384133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 31430541 - 31430489
Alignment:
Q  108 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    |||||||||||||||||||| |||||| |||| |||||||||| |||||||||    
T  31430541 ttgtgtttctctctctttcataagcattgtgacattgtgattggtcaatgtca 31430489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 52028607 - 52028659
Alignment:
Q  108 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    ||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  52028607 ttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtca 52028659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 53954746 - 53954686
Alignment:
Q  52 tgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    |||||||||||||| |||||||||| |||||||| |||||||||||||  |||| ||||||    
T  53954746 tgtgacatagagttgggtgacattggtgacattgtccaattacaatgtcacaatgcttgtg 53954686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 23444260 - 23444331
Alignment:
Q  41 ggtagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    ||||| ||||| || |||||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  23444260 ggtagcatttgggtaacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 23444331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 5048886 - 5048936
Alignment:
Q  136 gtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatcatc 186  Q
    |||| ||| ||||||| |||||||||||||||||||||||||||| |||||    
T  5048886 gtgacattatgattgaccaatgtcatcaatgtcacccaactctatgtcatc 5048936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 26186090 - 26186144
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||| |||| ||||||||||  ||||||||||||||| ||||||||||||    
T  26186090 cacaagcattgtgaaattgtgattggccaatgtcatcaatgttacccaactctat 26186144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 44380071 - 44380009
Alignment:
Q  47 atttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatactt 109  Q
    ||||| |||||||||||||  ||||||||| ||| |||||||||| |||||||| ||||||||    
T  44380071 atttgggtgacatagagttgagtgacattggtgatattgaccaatcacaatgttacaatactt 44380009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 35682302 - 35682242
Alignment:
Q  52 tgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    |||||||||||||| |||||||||| ||||||||||| || |||||||  |||| ||||||    
T  35682302 tgtgacatagagttaggtgacattggtgacattgaccgatcacaatgtcacaatgcttgtg 35682242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 84
Target Start/End: Original strand, 25617980 - 25618015
Alignment:
Q  49 ttgtgtgacatagagtttggtgacattgatgacatt 84  Q
    ||||||||||||||||| ||||||||||||||||||    
T  25617980 ttgtgtgacatagagttgggtgacattgatgacatt 25618015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 42375145 - 42375086
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    ||||||||||||| |||||||||| ||||||||| |||| |||||||  |||| ||||||    
T  42375145 gtgacatagagttgggtgacattggtgacattgatcaatcacaatgtcacaatgcttgtg 42375086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 45591490 - 45591447
Alignment:
Q  108 ttgtgtttctctctctttcacaagcatggtgatattgtgattga 151  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||    
T  45591490 ttgtgtttctctctctttcacaagcattgtgacattatgattga 45591447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 3862681 - 3862619
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgttt 115  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||    
T  3862681 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgttt 3862619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 3862622 - 3862676
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||| |||  ||||||||||  |||||||| |||||||||||||||||||    
T  3862622 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctat 3862676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 3871438 - 3871376
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgttt 115  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||    
T  3871438 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgttt 3871376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 3871379 - 3871433
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||| |||  ||||||||||  |||||||| |||||||||||||||||||    
T  3871379 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctat 3871433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 23444345 - 23444399
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||| |||  ||||||||||  |||||||| |||||||||||||||||||    
T  23444345 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctat 23444399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 30710035 - 30709989
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgt 99  Q
    ||||||||||||| |||||||||| |||||||| ||||| |||||||    
T  30710035 gtgacatagagttaggtgacattggtgacattggccaatcacaatgt 30709989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 51265507 - 51265453
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||| |||  ||||||||||  |||||||| |||||||||||||||||||    
T  51265507 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctat 51265453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 24006147 - 24006098
Alignment:
Q  111 tgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    |||||||||||||||||||||||| |||  ||||||||||  ||||||||    
T  24006147 tgtttctctctctttcacaagcattgtgtcattgtgattggccaatgtca 24006098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 54716349 - 54716386
Alignment:
Q  41 ggtagtatttgtgtgacatagagtttggtgacattgat 78  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  54716349 ggtagtatttgagtgacatagagttgggtgacattgat 54716386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 160
Target Start/End: Complemental strand, 31532809 - 31532717
Alignment:
Q  68 gtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    ||||||| | |||||||||||||| |||| ||  ||||  |||| ||||||||||||| |||   || |||| ||||||||||| ||||||||    
T  31532809 gtgacataggtgacattgaccaatcacaacgtcacaatgtttgtatttctctctcttttacatatattgtgacattgtgattgaacaatgtca 31532717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 2e-35; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 11016872 - 11016999
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||| ||| |||| |||||||||| |    
T  11016872 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaaacattgtgacattgtgattggt 11016971  T
Q  153 caatgtcatcaatgtcacccaactctat 180  Q
    |||||||| |||||||||||||||||||    
T  11016972 caatgtcaccaatgtcacccaactctat 11016999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 38975808 - 38975935
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| |||||||||| | ||||||  |||| ||||||   |||| |||||||||||||||||||||||||||| |||  ||| | ||||||    
T  38975808 gtgacatagagttgggtgacattggtaacattggtcaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtggcattataattgat 38975907  T
Q  153 caatgtcatcaatgtcacccaactctat 180  Q
    |||||||| |||||||||| ||||||||    
T  38975908 caatgtcaccaatgtcacctaactctat 38975935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 53 - 160
Target Start/End: Complemental strand, 41018363 - 41018256
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||   |||| ||| |||||||||||||||||||||||| | || ||||||||||      
T  41018363 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttatgtttctctctctttcacaagcattgggacattgtgattggc 41018264  T
Q  153 caatgtca 160  Q
    ||||||||    
T  41018263 caatgtca 41018256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 15027548 - 15027661
Alignment:
Q  56 acatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaa 155  Q
    ||||||||||   |||||||| |||||||||||||| |||||    ||||  ||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  15027548 acatagagttgtttgacattggtgacattgaccaatcacaataccacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaa 15027647  T
Q  156 tgtcatcaatgtca 169  Q
    ||||| ||||||||    
T  15027648 tgtcaccaatgtca 15027661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 53 - 176
Target Start/End: Original strand, 4290548 - 4290671
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| ||||| |||| ||| ||||  |||| ||||||   |||| || |||||||||||||||||||||| || |||| ||||||||||      
T  4290548 gtgacatagagttgggtgatattggtgatattggtcaatcacaatgccacaatgctcgtgtttctctctctttcacaagaattgtgacattgtgattggc 4290647  T
Q  153 caatgtcatcaatgtcacccaact 176  Q
    |||||||| |||||||||||||||    
T  4290648 caatgtcaccaatgtcacccaact 4290671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 180
Target Start/End: Original strand, 42628323 - 42628425
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 177  Q
    |||||||||||||| ||||||   |||| ||| |||||||||||||||||||||||| | || ||||||||||  |||| ||| ||||||||||||||||    
T  42628323 tgacattgaccaatcacaatgccacaatgcttatgtttctctctctttcacaagcattgggacattgtgattggccaatatcaccaatgtcacccaactc 42628422  T
Q  178 tat 180  Q
    |||    
T  42628423 tat 42628425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 45231985 - 45231908
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaa 130  Q
    ||||||||||||| |||||||||| |||||||| ||||| |||||||| |||| ||| ||||||||||||||||||||    
T  45231985 gtgacatagagttgggtgacattggtgacattggccaatcacaatgttacaatgcttttgtttctctctctttcacaa 45231908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 48000769 - 48000705
Alignment:
Q  113 tttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 177  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||| ||||||||||||||||    
T  48000769 tttctctctctttcacaagcattgtggcattgtgattgatcaatgtcaccaatgtcacccaactc 48000705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 48000795 - 48000867
Alignment:
Q  108 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||||||||||||||||  ||| |||  |||||||||| ||||||||| |||||||||||||||||||    
T  48000795 ttgtgtttctctctctttcacagacattgtggcattgtgattggtcaatgtcaccaatgtcacccaactctat 48000867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 160
Target Start/End: Complemental strand, 34854830 - 34854723
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| |||||||||| ||||||||  |||| ||||||   ||||  |||||||||| |||||||||||||||| |||  ||||||||||      
T  34854830 gtgacatagagttgggtgacattggtgacattggtcaatcacaatgccacaatgtttgtgtttctatctctttcacaagcattgtggcattgtgattggc 34854731  T
Q  153 caatgtca 160  Q
    ||||||||    
T  34854730 caatgtca 34854723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 30217594 - 30217508
Alignment:
Q  47 atttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 134  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||| ||||| |   |||  || ||||||||||||||||||||||||    
T  30217594 atttgtgtgacatagagtttg-tgacattgatgacattcgccaatcacaatatcaaaatgtttatgtttctctctctttcacaagcat 30217508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 4649348 - 4649432
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctc--tctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    ||||||||  |||| |||||| | |||| ||||||||||||  |||||||||||||||| |||| ||||||||||| ||||||||    
T  4649348 tgacattggtcaatcacaatgctacaatgcttgtgtttctctctctctttcacaagcatcgtgacattgtgattgaccaatgtca 4649432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 27028928 - 27028831
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattg 150  Q
    |||||||||| || |||||  ||| ||||||||  |||| |||||||  ||||  |||||||||||||||||||| |||||| |||| ||||||||||    
T  27028928 gtgacatagacttgggtgatgttggtgacattggtcaatcacaatgtcacaatgtttgtgtttctctctctttcagaagcattgtgacattgtgattg 27028831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 6225600 - 6225542
Alignment:
Q  113 tttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacc 171  Q
    ||||||||||||||| ||| |  |||| |||||||||||| ||||||||||||||||||    
T  6225600 tttctctctctttcataaggaccgtgacattgtgattgattaatgtcatcaatgtcacc 6225542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 10419486 - 10419556
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 148  Q
    ||||||||  |||| | |||||| ||||||||||||||||||||||||||||||  | |||| ||||||||    
T  10419486 tgacattggtcaatcataatgttacaatacttgtgtttctctctctttcacaagttttgtgacattgtgat 10419556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 11017004 - 11016958
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgt 99  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||    
T  11017004 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgt 11016958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 22764820 - 22764754
Alignment:
Q  68 gtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 134  Q
    ||||||||| ||| |||| ||||| |||||||  ||||  |||||||||||||||||||||||||||    
T  22764820 gtgacattggtgatattggccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcat 22764754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 7672021 - 7671949
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattg 150  Q
    |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||  ||||||||||    
T  7672021 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtggcattgtgattg 7671949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 34854786 - 34854825
Alignment:
Q  141 attgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  34854786 attgtgattgaccaatgtcaccaatgtcacccaactctat 34854825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 41018319 - 41018358
Alignment:
Q  141 attgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  41018319 attgtgattggtcaatgtcaccaatgtcacccaactctat 41018358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 117 - 160
Target Start/End: Complemental strand, 41084251 - 41084208
Alignment:
Q  117 tctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    ||||||||||||||| || |||||||| ||||||||||||||||    
T  41084251 tctctctttcacaaggattgtgatattatgattgatcaatgtca 41084208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 42628430 - 42628371
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    ||||||||||||| |||||||||| ||| |||| ||||| ||||||| ||||| ||||||    
T  42628430 gtgacatagagttgggtgacattggtgatattggccaatcacaatgtcccaatgcttgtg 42628371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 11016931 - 11016877
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||| |||  ||||||||||  |||||||| |||||||||||||||||||    
T  11016931 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctat 11016877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 29053424 - 29053342
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| | |  ||||||||||  ||||||||    
T  29053424 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgaggcattgtgattggccaatgtca 29053342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 38975867 - 38975813
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||| |||  ||||||||||| |||||| | |||||||||||||||||||    
T  38975867 cacaagcattgtggcattgtgattgaccaatgttaccaatgtcacccaactctat 38975813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 48000869 - 48000827
Alignment:
Q  56 acatagagtttggtgacattgatgacattgaccaattacaatg 98  Q
    |||||||||| |||||||||| |||||||||||||| ||||||    
T  48000869 acatagagttgggtgacattggtgacattgaccaatcacaatg 48000827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 38975940 - 38975895
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 98  Q
    ||||||||||||| |||||||||| ||||||||| |||||| ||||    
T  38975940 gtgacatagagttaggtgacattggtgacattgatcaattataatg 38975895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 2e-35; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 291100 - 291231
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| ||||| ||||| |||||||||||| ||| |||| ||||||||||||    
T  291100 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtatttctttctctttcacaaacattgtgacattgtgattgat 291199  T
Q  153 caatgtcatcaatgtcacccaactctatatca 184  Q
    |||||||| |||||||||||||||||||||||    
T  291200 caatgtcaccaatgtcacccaactctatatca 291231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 49 - 180
Target Start/End: Original strand, 12913802 - 12913933
Alignment:
Q  49 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 148  Q
    |||||||||||| ||||  ||||||||| |||||||| ||||| |||||||  |||| ||||||| ||||||||||||||||||||  ||| ||||||||    
T  12913802 ttgtgtgacatatagttgagtgacattggtgacattggccaatcacaatgtcacaattcttgtgtatctctctctttcacaagcattatgacattgtgat 12913901  T
Q  149 tgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||| |||| ||| |||||||||||||||||||    
T  12913902 tgaccaatatcaccaatgtcacccaactctat 12913933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 19655161 - 19655288
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||| ||||||||||      
T  19655161 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattgga 19655260  T
Q  153 caatgtcatcaatgtcacccaactctat 180  Q
    |||||||| ||||||||| |||||||||    
T  19655261 caatgtcaccaatgtcactcaactctat 19655288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 78 - 180
Target Start/End: Original strand, 16971172 - 16971274
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 177  Q
    |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||||||| ||||||||| ||||||||||||||||    
T  16971172 tgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactc 16971271  T
Q  178 tat 180  Q
    |||    
T  16971272 tat 16971274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 78 - 179
Target Start/End: Original strand, 3899867 - 3899968
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 177  Q
    |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| |||||||||| ||||||||| ||||||||||||||||    
T  3899867 tgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactc 3899966  T
Q  178 ta 179  Q
    ||    
T  3899967 ta 3899968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 29699384 - 29699497
Alignment:
Q  67 ggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatg 166  Q
    |||||||||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||| ||||||||||  |||||||| ||||     
T  29699384 ggtgacattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtcaccaata 29699483  T
Q  167 tcacccaactctat 180  Q
    ||||||||||||||    
T  29699484 tcacccaactctat 29699497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 2953242 - 2953320
Alignment:
Q  102 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||||||  |||||||| |||||||||||||||||||    
T  2953242 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtcaccaatgtcacccaactctat 2953320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 58 - 160
Target Start/End: Original strand, 16439146 - 16439248
Alignment:
Q  58 atagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatg 157  Q
    |||||||| ||| | |||| ||||||||  |||| |||||||  |||| |||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  16439146 atagagttgggtaatattggtgacattggtcaatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatg 16439245  T
Q  158 tca 160  Q
    |||    
T  16439246 tca 16439248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 2094018 - 2093945
Alignment:
Q  107 cttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||||||||||||||||||||||  ||| |||||||||||||||||||| |||| ||||||||||||||    
T  2094018 cttgtgtttctctctctttcacaagcattatgacattgtgattgatcaatgtcaccaatatcacccaactctat 2093945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 179
Target Start/End: Original strand, 26662427 - 26662529
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtga-ttgatcaatgtcatcaatgtcacccaact 176  Q
    |||||||||||||| |||||||| || | ||||||||||||||| ||||||||| || |||| ||||||| |||| |||||||| |||| ||||||||||    
T  26662427 tgacattgaccaatcacaatgttacattgcttgtgtttctctctttttcacaagtattgtgacattgtgatttgaccaatgtcaccaatatcacccaact 26662526  T
Q  177 cta 179  Q
    |||    
T  26662527 cta 26662529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 179
Target Start/End: Original strand, 26934022 - 26934124
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtga-ttgatcaatgtcatcaatgtcacccaact 176  Q
    |||||||||||||| |||||||| || | ||||||||||||||| ||||||||| || |||| ||||||| |||| |||||||| |||| ||||||||||    
T  26934022 tgacattgaccaatcacaatgttacattgcttgtgtttctctctttttcacaagtattgtgacattgtgatttgaccaatgtcaccaatatcacccaact 26934121  T
Q  177 cta 179  Q
    |||    
T  26934122 cta 26934124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 180
Target Start/End: Original strand, 28818945 - 28819047
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 177  Q
    ||||||||  |||| |||||||  |||||||||| |||||||||||||||||||||| |||| ||| ||||||| |||||||| |||| |||| ||||||    
T  28818945 tgacattggtcaatcacaatgtcacaatacttgtatttctctctctttcacaagcattgtgacattatgattgaccaatgtcaccaatatcactcaactc 28819044  T
Q  178 tat 180  Q
    |||    
T  28819045 tat 28819047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 184
Target Start/End: Complemental strand, 30117962 - 30117832
Alignment:
Q  54 tgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatc 153  Q
    |||||||||||| | |||||||| ||| ||||  |||| | ||||   |||| ||||||||||||||| ||||| || ||| |||| |||||||||| ||    
T  30117962 tgacatagagttggatgacattggtgatattggtcaatcataatgccacaatgcttgtgtttctctctttttcataaacattgtgacattgtgattggtc 30117863  T
Q  154 aatgtcatcaatgtcacccaactctatatca 184  Q
    ||| ||| |||||||||||||||||||||||    
T  30117862 aatatcaccaatgtcacccaactctatatca 30117832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 49 - 160
Target Start/End: Complemental strand, 3180198 - 3180088
Alignment:
Q  49 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 148  Q
    |||||| |||||||||| ||| |||||| ||||||||  |||| ||||||   |||| |||||||||||||||||||||||| ||| |||| ||| ||||    
T  3180198 ttgtgtcacatagagtt-ggtaacattggtgacattggtcaatcacaatgccacaatgcttgtgtttctctctctttcacaaacattgtgacattatgat 3180100  T
Q  149 tgatcaatgtca 160  Q
    ||||||||||||    
T  3180099 tgatcaatgtca 3180088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 16802472 - 16802554
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    |||||||| ||||| |||||||  ||||| |||||||||||||||||| |||||||| |||| ||| |||||| |||||||||    
T  16802472 tgacattggccaatcacaatgtaacaatatttgtgtttctctctcttttacaagcattgtgacattctgattggtcaatgtca 16802554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 32485630 - 32485677
Alignment:
Q  131 gcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactct 178  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  32485630 gcattgtgatattgtgattgatcaatgtcaccaatgtcacccaactct 32485677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 13312321 - 13312272
Alignment:
Q  131 gcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    |||| |||| ||||||||||||||||||||||||||||||| ||||||||    
T  13312321 gcattgtgacattgtgattgatcaatgtcatcaatgtcacctaactctat 13312272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 19598335 - 19598416
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 134  Q
    ||||||||||||| ||| |||||| ||||||||  |||| |||||    |||| ||||||||||||||||||||||||||||    
T  19598335 gtgacatagagttgggtaacattggtgacattggtcaatcacaataccacaatgcttgtgtttctctctctttcacaagcat 19598416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 16439200 - 16439140
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatcatc 186  Q
    ||||||||| |||| ||||||||||| |||||||| |||| | ||||||||||||||||||    
T  16439200 cacaagcattgtgacattgtgattgaccaatgtcaccaatattacccaactctatatcatc 16439140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 16971279 - 16971220
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  16971279 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 16971220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 13312267 - 13312313
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgt 99  Q
    ||||||||||||| |||||||||||||||||||| |||| |||||||    
T  13312267 gtgacatagagttaggtgacattgatgacattgatcaatcacaatgt 13312313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 19598394 - 19598340
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||| ||| |||||||||||| |||||||| |||||| ||||||||||||    
T  19598394 cacaagcattgtggtattgtgattgaccaatgtcaccaatgttacccaactctat 19598340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 38134485 - 38134411
Alignment:
Q  76 gatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattg 150  Q
    ||||| |||| ||||| |||||||  |||| ||||||||||| |||||||||| ||||| |||| ||||||||||    
T  38134485 gatgatattggccaatcacaatgtcacaatgcttgtgtttctttctctttcactagcattgtgacattgtgattg 38134411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 2356312 - 2356401
Alignment:
Q  88 caattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    |||||||||||||  ||| ||||||||  ||||||||||| |||||| |||| | ||||||||  |||||||| |||||||| ||||||||||    
T  2356312 caattacaatgttataatgcttgtgtt--tctctctttcataagcattgtgaca-tgtgattggccaatgtcaccaatgtcatccaactctat 2356401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 39031296 - 39031199
Alignment:
Q  43 tagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgat 140  Q
    |||||||||  |||||||||||  |||||||||| ||||| ||| |||| ||||| |   |||| |||| ||||||| |||||||||||||| |||||    
T  39031296 tagtatttggatgacatagagtggggtgacattggtgacactgatcaatcacaatatcataatatttgtatttctctttctttcacaagcattgtgat 39031199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 39031238 - 39031287
Alignment:
Q  137 tgatattgtgattgatcaatgtcatcaatgtcacccaactctatatcatc 186  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||| |||||    
T  39031238 tgatattgtgattgatcagtgtcaccaatgtcaccccactctatgtcatc 39031287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 186
Target Start/End: Original strand, 228402 - 228486
Alignment:
Q  102 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatcatc 186  Q
    ||||| |||||||| ||||||||| ||||||||  ||| |||||||||||  ||| |||||||| | |||||||| ||| |||||    
T  228402 caatatttgtgtttttctctcttttacaagcattttgacattgtgattgacaaatctcatcaatattacccaactttatgtcatc 228486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 2953325 - 2953266
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    ||||||||||||| |||||||||| |||||||| ||||| |||||||  |||| ||||||    
T  2953325 gtgacatagagttgggtgacattggtgacattggccaatcacaatgtcacaatgcttgtg 2953266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 3899974 - 3899915
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    ||||| ||||||| |||||||||| |||||||||||||| |||||||  |||| ||||||    
T  3899974 gtgacttagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 3899915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 7009401 - 7009452
Alignment:
Q  123 tttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaa 174  Q
    |||||||||||| |||||||||||||||| |||| ||| |||||||| ||||    
T  7009401 tttcacaagcattgtgatattgtgattgaccaatatcaccaatgtcatccaa 7009452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 291158 - 291092
Alignment:
Q  127 acaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatca-tcaagtat 192  Q
    |||||||| |||  ||||||||||  |||||||| ||||||||||||||||||| ||| ||||||||    
T  291158 acaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcactcaagtat 291092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 12913945 - 12913892
Alignment:
Q  46 tatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgt 99  Q
    |||||||||||||||||||| |||||||||| ||| ||||  |||| |||||||    
T  12913945 tatttgtgtgacatagagttgggtgacattggtgatattggtcaatcacaatgt 12913892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 39777088 - 39777039
Alignment:
Q  151 atcaatgtcatcaatgtcacccaactctatatcatcaagtatccaacaca 200  Q
    |||||||||| ||||||||||||||||||| ||| | | |||||||||||    
T  39777088 atcaatgtcaccaatgtcacccaactctatgtcacccaatatccaacaca 39777039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 17849221 - 17849269
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaa 174  Q
    ||||||||| | |||||||||||||| |||||||| |||| ||||||||    
T  17849221 cacaagcattgcgatattgtgattgaccaatgtcaccaatatcacccaa 17849269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 22083001 - 22083045
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaat 97  Q
    |||||||||||||  |||||||| ||||||||||||||| |||||    
T  22083001 gtgacatagagttgtgtgacattaatgacattgaccaatcacaat 22083045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 39777121 - 39777089
Alignment:
Q  12 atgaagaattaaggagacaaacaatagtaggta 44  Q
    |||||||||||||||||||||||||| ||||||    
T  39777121 atgaagaattaaggagacaaacaatattaggta 39777089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 2e-35; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 30734537 - 30734410
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| |||||||||| |||||||| ||||| |||||||   ||||||||||||||||| |||||||||||||| |||| |||||||| | |    
T  30734537 gtgacatagagttaggtgacattggtgacattggccaatcacaatgtcataatacttgtgtttctctatctttcacaagcattgtgacattgtgatcggt 30734438  T
Q  153 caatgtcatcaatgtcacccaactctat 180  Q
    ||||||||||||||||||| ||||||||    
T  30734437 caatgtcatcaatgtcaccaaactctat 30734410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 49 - 160
Target Start/End: Original strand, 33689175 - 33689286
Alignment:
Q  49 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 148  Q
    ||||||||||||||||| |||||||||||||| ||||  |||| |||||||  |||| |||||||||||||||||||||||||||| |||| ||||||||    
T  33689175 ttgtgtgacatagagttgggtgacattgatgatattggtcaatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgat 33689274  T
Q  149 tgatcaatgtca 160  Q
    ||  ||||||||    
T  33689275 tggccaatgtca 33689286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 53 - 174
Target Start/End: Complemental strand, 47492182 - 47492061
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| |||||||||| | | |||| ||||| |||||||  |||| ||||||||||||||| |||||||||||| |||| ||||||||||      
T  47492182 gtgacatagagttgggtgacattggtcatattggccaatcacaatgtcacaatgcttgtgtttctctctttttcacaagcattgtgacattgtgattggc 47492083  T
Q  153 caatgtcatcaatgtcacccaa 174  Q
    |||||||| |||||||||||||    
T  47492082 caatgtcaccaatgtcacccaa 47492061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 53 - 186
Target Start/End: Complemental strand, 51046208 - 51046075
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| | |||||||| |||||||| ||||| ||||||    ||| |||||||||||||||||||||||| ||| |||| ||| ||||||||    
T  51046208 gtgacatagagttggatgacattggtgacattggccaatcacaatgccataatgcttgtgtttctctctctttcacaaacattgtgacattatgattgat 51046109  T
Q  153 caatgtcatcaatgtcacccaactctatatcatc 186  Q
    |||||||| |||| ||| |||||||||| |||||    
T  51046108 caatgtcaccaatatcatccaactctatgtcatc 51046075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 41752967 - 41753094
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||   ||||  |||||||||| |||||||||||||||| |||  ||||||||||      
T  41752967 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtgtttctttctctttcacaagcattgtggcattgtgattggc 41753066  T
Q  153 caatgtcatcaatgtcacccaactctat 180  Q
    |||||||| ||||||||| |||||||||    
T  41753067 caatgtcaccaatgtcactcaactctat 41753094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 43139851 - 43139737
Alignment:
Q  46 tatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgt 145  Q
    |||||| ||||||||||||| |||||||||| |||||||| ||||| ||||||   |||| ||||||||||||||||||||||||||||  ||| |||||    
T  43139851 tatttgggtgacatagagttgggtgacattggtgacattggccaataacaatgccacaatgcttgtgtttctctctctttcacaagcattctgacattgt 43139752  T
Q  146 gattgatcaatgtca 160  Q
    |||||| | ||||||    
T  43139751 gattgaccgatgtca 43139737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 50524706 - 50524832
Alignment:
Q  54 tgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatc 153  Q
    ||||||||||||  |||| | ||||||||||||||||| | |||||  ||||  ||||||||||||||||||||||||||| || | |||||||||||      
T  50524706 tgacatagagttgagtgataatgatgacattgaccaatcataatgtcacaatgtttgtgtttctctctctttcacaagcatcgtaacattgtgattgact 50524805  T
Q  154 aatgtcatcaatgtcacccaactctat 180  Q
    ||| ||| ||||||||| |||||||||    
T  50524806 aatatcaccaatgtcactcaactctat 50524832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 49 - 156
Target Start/End: Original strand, 55223231 - 55223338
Alignment:
Q  49 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 148  Q
    ||||||||||||||||| |||||||||| ||| ||||  |||| ||||| ||  ||||||| |||||||||||||||||||||||| |||| ||| ||||    
T  55223231 ttgtgtgacatagagttaggtgacattggtgatattggtcaatcacaatattagaatacttatgtttctctctctttcacaagcattgtgacattatgat 55223330  T
Q  149 tgatcaat 156  Q
    ||| ||||    
T  55223331 tgaccaat 55223338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 180
Target Start/End: Complemental strand, 1801556 - 1801454
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 177  Q
    |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||  ||||||||||  |||||||| ||||||||||||||||    
T  1801556 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactc 1801457  T
Q  178 tat 180  Q
    |||    
T  1801456 tat 1801454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 67 - 160
Target Start/End: Original strand, 50549992 - 50550085
Alignment:
Q  67 ggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    ||||| |||| |||||||||||||| ||||| || |||| |||||||||||||||||||||||| |||  ||| ||| ||||||||||||||||    
T  50549992 ggtgatattggtgacattgaccaatcacaatattacaatgcttgtgtttctctctctttcacaaacattatgacattatgattgatcaatgtca 50550085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 45103180 - 45103117
Alignment:
Q  117 tctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    |||||||||||||||||| |||| |||||||||||||||| ||| |||||||||||||||||||    
T  45103180 tctctctttcacaagcattgtgacattgtgattgatcaatatcaccaatgtcacccaactctat 45103117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 30734401 - 30734464
Alignment:
Q  49 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||  |||| ||||||    
T  30734401 ttgtgtgacatagagtttggtgacattgatgacattgaccgatcacaatgtcacaatgcttgtg 30734464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 30476584 - 30476502
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    ||||||||  |||| |||||||  |||| |||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  30476584 tgacattggtcaatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtca 30476502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 30580890 - 30580764
Alignment:
Q  54 tgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatc 153  Q
    ||||||||| || |||||||||  ||||||||  |||| |||||||  || | ||||||||||| ||||||||||||  || |||| ||| |||||| ||    
T  30580890 tgacatagaattgggtgacatttgtgacattggtcaatcacaatgtcacagtgcttgtgtttctatctctttcacaaatattgtgacattatgattggtc 30580791  T
Q  154 aatgtcatcaatgtcacccaactctat 180  Q
    ||| ||| ||||||||||||| |||||    
T  30580790 aatatcaccaatgtcacccaattctat 30580764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 47677365 - 47677283
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    ||||||||| |||| |||||||  ||||  ||||||||||||||||||||||||||| |||| |||||||| | |||||||||    
T  47677365 tgacattgatcaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgatcggtcaatgtca 47677283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 29031814 - 29031746
Alignment:
Q  88 caattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaat 156  Q
    ||||||||||||  ||||  ||||||||||||||||||||||||||| |||| ||||||||||| ||||    
T  29031814 caattacaatgtcacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattgaccaat 29031746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 30904296 - 30904368
Alignment:
Q  102 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaa 174  Q
    |||| ||||||||||||||||||| | ||  || ||||||||||||||||| ||||||||| |||||||||||    
T  30904296 caatgcttgtgtttctctctcttttataaatattgtgatattgtgattgattaatgtcatcgatgtcacccaa 30904368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 162
Target Start/End: Original strand, 18321657 - 18321763
Alignment:
Q  56 acatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaa 155  Q
    |||||||||| ||||| |||| ||||||||  |||| |||||||  |||   |||||||| ||||| ||||||| |||| |||| ||||||||||| |||    
T  18321657 acatagagttgggtgatattggtgacattggtcaatcacaatgtcacaaagtttgtgtttttctctttttcacatgcattgtgacattgtgattgaccaa 18321756  T
Q  156 tgtcatc 162  Q
    |||||||    
T  18321757 tgtcatc 18321763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 33689238 - 33689184
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||| |||| ||||||||||| |||| |||||||||||||||||||||||    
T  33689238 cacaagcattgtgacattgtgattgaccaatatcatcaatgtcacccaactctat 33689184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 39385798 - 39385746
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaa 130  Q
    |||||||| ||||| |||||||| ||||| |||| ||||||||||||||||||    
T  39385798 tgacattggccaatcacaatgttacaatatttgtatttctctctctttcacaa 39385746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 192
Target Start/End: Complemental strand, 50550037 - 50549970
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatca-tcaagtat 192  Q
    ||||||||| || |||||||||||| ||||||||| |||| ||||||| || ||||||| ||||||||    
T  50550037 cacaagcattgtaatattgtgattggtcaatgtcaccaatatcacccagctttatatcactcaagtat 50549970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 1801449 - 1801494
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 98  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||    
T  1801449 gtgacatagagttgggtgacattggtgacattggccaatcacaatg 1801494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 18321703 - 18321659
Alignment:
Q  136 gtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    |||| ||||||||||| |||||||| |||| ||||||||||||||    
T  18321703 gtgacattgtgattgaccaatgtcaccaatatcacccaactctat 18321659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 30580832 - 30580892
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatcatc 186  Q
    ||||||||  |||| ||||||||||| ||||||||  |||||||||||| ||||| |||||    
T  30580832 cacaagcactgtgacattgtgattgaccaatgtcacaaatgtcacccaattctatgtcatc 30580892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 77
Target Start/End: Original strand, 47677263 - 47677291
Alignment:
Q  49 ttgtgtgacatagagtttggtgacattga 77  Q
    |||||||||||||||||||||||||||||    
T  47677263 ttgtgtgacatagagtttggtgacattga 47677291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 49 - 180
Target Start/End: Complemental strand, 7185 - 7055
Alignment:
Q  49 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 148  Q
    ||||||||||||||||| |||||||||| |||||||| ||||| |||||||  |||| |||||||||||||||||||||||||||| |||| ||||||||    
T  7185 ttgtgtgacatagagtt-ggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgat 7087  T
Q  149 tgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||   ||| ||| |||||||||||||||||||    
T  7086 tggctaatatcaccaatgtcacccaactctat 7055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 1e-30; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 16514427 - 16514554
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    ||||||||||||| |||||||||| |||||||| ||||| || |||    ||| |||||||||||||||||||||||||||| |||| |||||||||| |    
T  16514427 gtgacatagagttgggtgacattggtgacattggccaatcactatgccataatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggt 16514526  T
Q  153 caatgtcatcaatgtcacccaactctat 180  Q
    |||||||| |||| ||||||||||||||    
T  16514527 caatgtcaccaatctcacccaactctat 16514554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 29508826 - 29508698
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgata-ttgtgattga 151  Q
    ||||||||||||| ||||| |||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||||||| |||  | |||||||||     
T  29508826 gtgacatagagttgggtgatattggtgacattggccaatcacaatgccgcaatgcttgtgtttctctctctttcacaagcattgtggcatttgtgattgg 29508727  T
Q  152 tcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||| |||||||||||||||||||    
T  29508726 tcaatgtcaccaatgtcacccaactctat 29508698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 88 - 180
Target Start/End: Complemental strand, 14229453 - 14229361
Alignment:
Q  88 caattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    |||| |||||||  |||| |||||||||||||||||||||||||||| |||| ||||||||||| |||||||| |||||||||| ||||||||    
T  14229453 caatcacaatgtcacaatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgaccaatgtcaccaatgtcaccgaactctat 14229361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 78 - 180
Target Start/End: Original strand, 38933615 - 38933717
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 177  Q
    |||||||||||||| ||||||   |||| |||||||||||||||||||||||||||| |||| ||| ||||||  ||| |||| ||||||||||||||||    
T  38933615 tgacattgaccaatcacaatgccacaatgcttgtgtttctctctctttcacaagcattgtgacattatgattggccaacgtcaccaatgtcacccaactc 38933714  T
Q  178 tat 180  Q
    |||    
T  38933715 tat 38933717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 69 - 180
Target Start/End: Original strand, 6721970 - 6722081
Alignment:
Q  69 tgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtc 168  Q
    |||||||| |||||||||||||| ||||| |  |||| |||||||||||||||||||||||| ||| |||| ||||||||||  |||| |||  ||||||    
T  6721970 tgacattggtgacattgaccaatcacaatatcacaatgcttgtgtttctctctctttcacaaacattgtgacattgtgattggccaatatcactaatgtc 6722069  T
Q  169 acccaactctat 180  Q
    | ||||||||||    
T  6722070 aaccaactctat 6722081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 180
Target Start/End: Complemental strand, 6217334 - 6217232
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 177  Q
    |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||  ||||||||||  |||||||| ||||||||||||||||    
T  6217334 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactc 6217235  T
Q  178 tat 180  Q
    |||    
T  6217234 tat 6217232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 14470693 - 14470600
Alignment:
Q  87 ccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||| |||||||  ||||  ||||||||||||||||||||||||||| |  | |||||||||| ||||||||| |||||||||||||||||||    
T  14470693 ccaatcacaatgtcacaatgtttgtgtttctctctctttcacaagcattgcaacattgtgattggtcaatgtcaccaatgtcacccaactctat 14470600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 163
Target Start/End: Original strand, 8534164 - 8534259
Alignment:
Q  68 gtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatca 163  Q
    ||||||||||||||||||| ||||||||||||   |||| |||||||||||||| ||||||||| || |||| ||||| ||||| |||| ||||||    
T  8534164 gtgacattgatgacattgatcaattacaatgtaaaaatatttgtgtttctctctatttcacaagaattgtgacattgtaattgaccaatatcatca 8534259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 49 - 180
Target Start/End: Original strand, 24115919 - 24116050
Alignment:
Q  49 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 148  Q
    |||||||| ||||||||  || |||||| | |||||| ||||| |||||||| |||| | |||||||| | ||||||||||||||| | || ||||||||    
T  24115919 ttgtgtgagatagagttgagtcacattggtaacattggccaatcacaatgttacaatgcctgtgtttcacactctttcacaagcattgcgacattgtgat 24116018  T
Q  149 tgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||| |||| |||  |||| |||||||||||||    
T  24116019 tgaccaatatcactaatggcacccaactctat 24116050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 14470591 - 14470654
Alignment:
Q  49 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    ||||||||||||||||| |||||||||| |||||||||||||| |||||||| |||| ||||||    
T  14470591 ttgtgtgacatagagttgggtgacattggtgacattgaccaatcacaatgttgcaatgcttgtg 14470654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 160
Target Start/End: Original strand, 15011297 - 15011390
Alignment:
Q  67 ggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    |||||||||| ||| |||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  15011297 ggtgacattggtgatattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtca 15011390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 2893991 - 2894075
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatc 162  Q
    |||||||| ||||| ||||| |  |||| ||||| |||||||||||||||||||||| |||| | ||||||||| ||||||||||    
T  2893991 tgacattggccaatcacaatctcacaatgcttgtatttctctctctttcacaagcattgtgacactgtgattgaccaatgtcatc 2894075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 14892318 - 14892390
Alignment:
Q  108 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    |||| ||||||||||||||| ||| || || | |||||||||||||||||||| |||||||| ||||||||||    
T  14892318 ttgtctttctctctctttcataagtattgtaacattgtgattgatcaatgtcaccaatgtcatccaactctat 14892390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 37961764 - 37961836
Alignment:
Q  108 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||||||||||||||||||||| |||  |||||||||| |||||||||  ||| |||| |||||||||    
T  37961764 ttgtgtttctctctctttcacaagcattgtggcattgtgattggtcaatgtcacaaatatcactcaactctat 37961836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 45213939 - 45213892
Alignment:
Q  49 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaa 96  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  45213939 ttgtgtgacatagagttgggtgacattgatgacattgaccaatcacaa 45213892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 2828612 - 2828694
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    |||||||| ||||| |||||||   ||| ||||||||||||||||||||| |||||| |||| ||||||||||  ||||||||    
T  2828612 tgacattggccaatcacaatgtcaaaatgcttgtgtttctctctctttcagaagcattgtgacattgtgattggccaatgtca 2828694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 14892407 - 14892339
Alignment:
Q  41 ggtagtatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatactt 109  Q
    ||||| ||||| ||||||||||||| | |||||||| ||||||||| |||| |||||||| ||||||||    
T  14892407 ggtagcatttgggtgacatagagttggatgacattggtgacattgatcaatcacaatgttacaatactt 14892339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 178
Target Start/End: Complemental strand, 29925680 - 29925580
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 177  Q
    |||||||| ||||| ||||||   ||||  |||||||||||||||||||||||||||  ||| |||||||  |  |||||||| |||| |||||||||||    
T  29925680 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattctgacattgtgaggggccaatgtcaccaatatcacccaactc 29925581  T
Q  178 t 178  Q
    |    
T  29925580 t 29925580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 33018620 - 33018680
Alignment:
Q  125 tcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatcat 185  Q
    |||||||||| |||| ||||||||||| |||| ||| ||||||||||||||||||| ||||    
T  33018620 tcacaagcattgtgacattgtgattgaccaatatcaccaatgtcacccaactctatgtcat 33018680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 160
Target Start/End: Complemental strand, 37762128 - 37762029
Alignment:
Q  61 gagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    |||||| |||| |||| |||||| |  |||| ||||| |  |||| ||||||||||| |||||||||||||||| | || |||||||||| |||||||||    
T  37762128 gagtttagtgatattggtgacatgggtcaatcacaatatcacaatgcttgtgtttctttctctttcacaagcattgcgacattgtgattggtcaatgtca 37762029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 45213892 - 45213930
Alignment:
Q  142 ttgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  45213892 ttgtgattggtcaatgtcatcaatgtcacccaactctat 45213930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 6722013 - 6721965
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaa 174  Q
    ||||||||| ||||||||||||||| ||||||||| |||||||| ||||    
T  6722013 cacaagcattgtgatattgtgattggtcaatgtcaccaatgtcatccaa 6721965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 16514559 - 16514500
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    ||||||||||||| ||||| |||| |||||||||||||| |||||||  |||| ||||||    
T  16514559 gtgacatagagttgggtgagattggtgacattgaccaatcacaatgtcacaatgcttgtg 16514500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 29508693 - 29508736
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaa 96  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||    
T  29508693 gtgacatagagttgggtgacattggtgacattgaccaatcacaa 29508736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 6217227 - 6217272
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatg 98  Q
    ||||||||||||| |||||||||| |||||||| ||||| ||||||    
T  6217227 gtgacatagagttgggtgacattggtgacattggccaatcacaatg 6217272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 9173116 - 9173035
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcat 134  Q
    ||||||||||||| |||||||||| ||| |||| ||||| ||||||   |||| ||||| ||||||| ||||| | ||||||    
T  9173116 gtgacatagagttgggtgacattggtgatattggccaatcacaatgccacaatgcttgtatttctctttcttttataagcat 9173035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 78 - 180
Target Start/End: Complemental strand, 49813 - 49711
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 177  Q
    |||||||| ||||| ||||||   |||| ||||||||||||| |||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||    
T  49813 tgacattggccaatcacaatgccacaatgcttgtgtttctctttctttcacaagcattgtgacattgtgattggtcaatgtcatcaatgtcacccaactc 49714  T
Q  178 tat 180  Q
    |||    
T  49713 tat 49711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 49706 - 49765
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||  |||| ||||||    
T  49706 gtgacatagagttgggtgacattgatgacattgaccaatcacaatgtcacaatgcttgtg 49765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 1e-27; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 78 - 180
Target Start/End: Complemental strand, 24618711 - 24618609
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactc 177  Q
    |||| ||||||||| |||||||  |||| ||||||||||||||||||||| ||||||  ||| |||||||||||||||||||| ||||||||||||||||    
T  24618711 tgacgttgaccaatcacaatgtcacaatgcttgtgtttctctctctttcataagcattatgacattgtgattgatcaatgtcaccaatgtcacccaactc 24618612  T
Q  178 tat 180  Q
    |||    
T  24618611 tat 24618609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 49 - 180
Target Start/End: Original strand, 17750902 - 17751032
Alignment:
Q  49 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgat 148  Q
    ||||||||||||||||| | |||||||| ||||||||  |||| |||||||  ||||  |||| ||| |||||||||||||||||| |||| ||||||||    
T  17750902 ttgtgtgacatagagtt-gatgacattggtgacattggtcaatcacaatgtcacaatgtttgtatttatctctctttcacaagcattgtgacattgtgat 17751000  T
Q  149 tgatcaatgtcatcaatgtcacccaactctat 180  Q
     |  ||||||||||||| ||||||||||||||    
T  17751001 cggccaatgtcatcaatatcacccaactctat 17751032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 12343152 - 12343230
Alignment:
Q  102 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||||||  |||||||| |||| ||||||||||||||    
T  12343152 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtcaccaatctcacccaactctat 12343230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 551307 - 551193
Alignment:
Q  46 tatttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgt 145  Q
    |||||| |||||||||| || | ||| |||| |||||||| ||||| ||||||   |||| |||||||||||||||||||||||| ||| |||  |||||    
T  551307 tatttgggtgacatagaattggatgatattggtgacattggccaatcacaatgccacaatgcttgtgtttctctctctttcacaaacattgtggcattgt 551208  T
Q  146 gattgatcaatgtca 160  Q
    |||||| ||||||||    
T  551207 gattgaccaatgtca 551193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 13043509 - 13043587
Alignment:
Q  102 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||   |||||||| |||| |||| |||||||||    
T  13043509 caatgcttgtgtttctctctctttcacaagcattgtgatattgtgattagccaatgtcaccaatatcactcaactctat 13043587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 147
Target Start/End: Original strand, 24587464 - 24587558
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtga 147  Q
    ||||||||||||| |||||||||  ||||||||  |||| |||||||  |||| |||||||||||| || |||||||||||| |||| |||||||    
T  24587464 gtgacatagagttgggtgacattagtgacattggtcaatcacaatgtcacaatgcttgtgtttctcgctttttcacaagcattgtgacattgtga 24587558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 10521959 - 10521877
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    ||||||||  |||| |||||||   ||| ||||||||||||||||||||| |||||| |||| ||||||||||  ||||||||    
T  10521959 tgacattggtcaatcacaatgtcataatgcttgtgtttctctctctttcataagcattgtgacattgtgattggccaatgtca 10521877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 24587523 - 24587469
Alignment:
Q  126 cacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    ||||||||| |||| ||||||||||| ||||||||  ||||||||||||||||||    
T  24587523 cacaagcattgtgacattgtgattgaccaatgtcactaatgtcacccaactctat 24587469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 2315381 - 2315332
Alignment:
Q  111 tgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    |||||| ||||||||||||| ||| |||| ||||||||||||||||||||    
T  2315381 tgtttcgctctctttcacaaacattgtgacattgtgattgatcaatgtca 2315332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 135
Target Start/End: Original strand, 31654333 - 31654390
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatg 135  Q
    |||||||| ||||| |||||||  |||| |||||||||||||||||||||||| ||||    
T  31654333 tgacattggccaatcacaatgtcacaatgcttgtgtttctctctctttcacaaacatg 31654390  T

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Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 112
Target Start/End: Complemental strand, 17751041 - 17750978
Alignment:
Q  49 ttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    ||||||||||||||||| ||||| ||||||||||||| || || |||||||  |||| ||||||    
T  17751041 ttgtgtgacatagagttgggtgatattgatgacattggccgatcacaatgtcacaatgcttgtg 17750978  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 24975815 - 24975760
Alignment:
Q  125 tcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    |||||||||| |||  ||||||||||| |||||||| |||||||| ||||||||||    
T  24975815 tcacaagcattgtggcattgtgattgaccaatgtcaccaatgtcagccaactctat 24975760  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 24618604 - 24618650
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgt 99  Q
    ||||||||||||| |||||||||| ||||||||| |||| |||||||    
T  24618604 gtgacatagagttgggtgacattggtgacattgatcaatcacaatgt 24618650  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 7384552 - 7384492
Alignment:
Q  124 ttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctatatca 184  Q
    ||||||| |||  ||| |||||||||| |||||||||  ||||||| ||||||||||||||    
T  7384552 ttcacaaacattatgacattgtgattggtcaatgtcactaatgtcatccaactctatatca 7384492  T

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Target: scaffold0180 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 19202 - 19130
Alignment:
Q  108 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatgtcacccaactctat 180  Q
    |||||||||||| |||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||    
T  19202 ttgtgtttctctttcttccacaagcattgtgacattgtgattgatcaatatcatcaatgtcacccaactctat 19130  T

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Target: scaffold0180; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 19119 - 19184
Alignment:
Q  47 atttgtgtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtg 112  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||| |||||||  |||| ||||||    
T  19119 atttgtgtgacatagagttgggtgacattgatgatattgatcaatcacaatgtcacaatgcttgtg 19184  T

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Target: scaffold0161 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 27355 - 27228
Alignment:
Q  53 gtgacatagagtttggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgat 152  Q
    |||| |||||||| |||||||||| ||| |||| ||||| ||||||   |||| ||| ||||||||||||||||||||| ||  ||| ||||||||||      
T  27355 gtgatatagagttgggtgacattggtgatattggccaatcacaatgccacaatgcttctgtttctctctctttcacaagaattatgacattgtgattggc 27256  T
Q  153 caatgtcatcaatgtcacccaactctat 180  Q
    |||| |||  ||||||||||||||||||    
T  27255 caatatcactaatgtcacccaactctat 27228  T

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Target: scaffold1033 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1033
Description:

Target: scaffold1033; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 2265 - 2322
Alignment:
Q  102 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtc 159  Q
    |||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  2265 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatgtc 2322  T

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Target: scaffold1029 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1029
Description:

Target: scaffold1029; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 2265 - 2322
Alignment:
Q  102 caatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtc 159  Q
    |||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  2265 caatgcttgtgtttctctctctttcacaagcattgtgacattgtgattgatcaatgtc 2322  T

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Target: scaffold0536 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 5010 - 4909
Alignment:
Q  67 ggtgacattgatgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtcatcaatg 166  Q
    ||||| |||| ||| ||||  ||||||||||||| ||   ||| ||||| |||||||||||||||||| || |||||||||||| || |||||| |||||    
T  5010 ggtgatattggtgatattggtcaattacaatgttaca---cttatgtttgtctctctttcacaagcattgtaatattgtgattggtcgatgtcaccaatg 4914  T
Q  167 tcacc 171  Q
    |||||    
T  4913 tcacc 4909  T

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Target: scaffold0047 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 63785 - 63867
Alignment:
Q  78 tgacattgaccaattacaatgttccaatacttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaatgtca 160  Q
    |||||||| ||||| ||||||   ||||  ||||||||||||||||||||||||||| |||| ||||||||||  ||||||||    
T  63785 tgacattggccaatcacaatgccacaatgtttgtgtttctctctctttcacaagcattgtgacattgtgattggccaatgtca 63867  T

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Target: scaffold0481 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 2967 - 2919
Alignment:
Q  108 ttgtgtttctctctctttcacaagcatggtgatattgtgattgatcaat 156  Q
    ||||||||||||||||||||||| ||| |||| |||||||||| |||||    
T  2967 ttgtgtttctctctctttcacaaacattgtgacattgtgattggtcaat 2919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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