View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6166_low_18 (Length: 344)
Name: NF6166_low_18
Description: NF6166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6166_low_18 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 258; Significance: 1e-143; HSPs: 20)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 1 - 334
Target Start/End: Original strand, 26178872 - 26179205
Alignment:
| Q |
1 |
ttcaattcaggatactccatcaaaactcatctgattcagttcccttcagctcaagtttgtcttccagatggtgttgaaaacatgaaagatggaatttcat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||||||||||||| || |||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
26178872 |
ttcaattcaggatactccatcaaaactcatcttatacagttcccttcagctcaggtaggtctccctgatggtgttgaaaacatgaaagatggaatttcat |
26178971 |
T |
|
| Q |
101 |
ttgaaatactaggtaaaatcacccgcgcagtaatgatgctccaaaatccaattgagattttgtttcaagatcttcaacctgattgtatagtcactgatat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
26178972 |
ttgaaatactaggtaaaatcacccgcgcaataattatgctccagaatccaattgagattttgtttcaagatcttcaacctgattgtattgtcactgatat |
26179071 |
T |
|
| Q |
201 |
gtcgtatccgtggacagtggaagcagctgcaaaactaggtattccaagaattcattattacagctcaagccaattctccaactgtgcagctcatttgatc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||| |||||||||||| |
|
|
| T |
26179072 |
gtcgtatccgtggacagtggaagcagctgcaaaactaggtattccaagaattcattattacagctcaagctacttctccaattgtgttgctcatttgatc |
26179171 |
T |
|
| Q |
301 |
atgaagtatagacctcatgataatttagtctctg |
334 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||| |
|
|
| T |
26179172 |
atgaagtatagaccaaatgataatttagtttctg |
26179205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 334
Target Start/End: Original strand, 26154992 - 26155325
Alignment:
| Q |
1 |
ttcaattcaggatactccatcaaaactcatctgattcagttcccttcagctcaagtttgtcttccagatggtgttgaaaacatgaaagatggaatttcat |
100 |
Q |
| |
|
||||||||||||||| | |||||||| ||||| || |||||||||||||||||||| |||| || |||||||||||||||||||||||||||| ||||| |
|
|
| T |
26154992 |
ttcaattcaggataccctatcaaaacacatcttatcaagttcccttcagctcaagttggtctccctgatggtgttgaaaacatgaaagatggaacttcat |
26155091 |
T |
|
| Q |
101 |
ttgaaatactaggtaaaatcacccgcgcagtaatgatgctccaaaatccaattgagattttgtttcaagatcttcaacctgattgtatagtcactgatat |
200 |
Q |
| |
|
|||||||||||||||||||| || | | || ||||||||| |||| |||||| |||||||||||| |||||||||||||||||||| || ||||| |
|
|
| T |
26155092 |
ttgaaatactaggtaaaatcggccttggaatatccatgctccaagatccgattgaggctttgtttcaagaccttcaacctgattgtatagtgacagatat |
26155191 |
T |
|
| Q |
201 |
gtcgtatccgtggacagtggaagcagctgcaaaactaggtattccaagaattcattattacagctcaagccaattctccaactgtgcagctcatttgatc |
300 |
Q |
| |
|
| || ||| ||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||| |
|
|
| T |
26155192 |
gatgtttccttggacggtcgaagcagctgcaagactaggtattccaagaattcattattacagctcaagctacttctccaattgtgctgctcatttgatc |
26155291 |
T |
|
| Q |
301 |
atgaagtatagacctcatgataatttagtctctg |
334 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
26155292 |
atgaagtatagacctcatgataatttagtttctg |
26155325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 1 - 334
Target Start/End: Complemental strand, 19103905 - 19103572
Alignment:
| Q |
1 |
ttcaattcaggatactccatcaaaactcatctgattcagttcccttcagctcaagtttgtcttccagatggtgttgaaaacatgaaagatggaatttcat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
19103905 |
ttcaattcaggatactccatcaaaactcaacttattcccttcccttcagctcaagttggtcttccagatggtgttgaaaacatcaaagatggaacttcac |
19103806 |
T |
|
| Q |
101 |
ttgaaatactaggtaaaatcacccgcgcagtaatgatgctccaaaatccaattgagattttgtttcaagatcttcaacctgattgtatagtcactgatat |
200 |
Q |
| |
|
||||||| || |||||||||| | | | | || ||||||||||| |||| || |||| | ||||||| ||||||| ||| ||||||||||| |||||| |
|
|
| T |
19103805 |
ttgaaatgcttggtaaaatcagcagtggaatattgatgctccaagatcctatcgagaatctgtttcacgatcttcgaccagattgtatagttactgatca |
19103706 |
T |
|
| Q |
201 |
gtcgtatccgtggacagtggaagcagctgcaaaactaggtattccaagaattcattattacagctcaagccaattctccaactgtgcagctcatttgatc |
300 |
Q |
| |
|
| |||| | ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| ||||| ||| |
|
|
| T |
19103705 |
gatgtatgcttggaccgtcgaagcagctgcaaaactaggtattccaagaattcactattacagctcaagctacttctccaactgtgttttccattttatc |
19103606 |
T |
|
| Q |
301 |
atgaagtatagacctcatgataatttagtctctg |
334 |
Q |
| |
|
|||||||||||||||||| |||||||||| |||| |
|
|
| T |
19103605 |
atgaagtatagacctcataataatttagtttctg |
19103572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 9 - 334
Target Start/End: Original strand, 26128364 - 26128689
Alignment:
| Q |
9 |
aggatactccatcaaaactcatctgattcagttcccttcagctcaagtttgtcttccagatggtgttgaaaacatgaaagatggaatttcatttgaaata |
108 |
Q |
| |
|
|||||||||||| |||||||| || |||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
26128364 |
aggatactccattaaaactcaacttattcagttcccttcagctcaagttggtctccctgatggtgttgaaaacatgaaagatggaacttcaacagaaatt |
26128463 |
T |
|
| Q |
109 |
ctaggtaaaatcacccgcgcagtaatgatgctccaaaatccaattgagattttgtttcaagatcttcaacctgattgtatagtcactgatatgtcgtatc |
208 |
Q |
| |
|
| ||||||||| || | | || ||||| ||| |||||| |||| |||||||||||| |||||||||||||||||||| || |||||| | || |
|
|
| T |
26128464 |
attggtaaaatcggccttggaatatcaatgcttcaagatccaactgaggctttgtttcaagaccttcaacctgattgtatagtgacagatatgatgcttc |
26128563 |
T |
|
| Q |
209 |
cgtggacagtggaagcagctgcaaaactaggtattccaagaattcattattacagctcaagccaattctccaactgtgcagctcatttgatcatgaagta |
308 |
Q |
| |
|
| ||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||| ||||| ||||||||||| |
|
|
| T |
26128564 |
cttggacggtcgaagcagctgcaaaactaggtattccaagaattcattataacagctcaagctacttctccaactgtgcagaacattttatcatgaagta |
26128663 |
T |
|
| Q |
309 |
tagacctcatgataatttagtctctg |
334 |
Q |
| |
|
|||||| ||||||||||||| |||| |
|
|
| T |
26128664 |
tagaccaaatgataatttagtttctg |
26128689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 334
Target Start/End: Original strand, 26203683 - 26204016
Alignment:
| Q |
1 |
ttcaattcaggatactccatcaaaactcatctgattcagttcccttcagctcaagtttgtcttccagatggtgttgaaaacatgaaagatggaatttcat |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||| | |
|
|
| T |
26203683 |
ttcaattcaggatactccatcaagactcatcttattcagttcccttcagctcaagtttgtcttccagatggtgttgaaaatctcaaagatggaacttcct |
26203782 |
T |
|
| Q |
101 |
ttgaaatactaggtaaaatcacccgcgcagtaatgatgctccaaaatccaattgagattttgtttcaagatcttcaacctgattgtatagtcactgatat |
200 |
Q |
| |
|
||||| || |||||||| | | | | |||||||||| ||| ||| |||||| ||| ||||||||||||||||||| ||||||||| | |||||||| |
|
|
| T |
26203783 |
cagaaattcttggtaaaatagctcaaggaataatgatgcttcaagatcaaattgaaattctgtttcaagatcttcaaccagattgtataataactgatat |
26203882 |
T |
|
| Q |
201 |
gtcgtatccgtggacagtggaagcagctgcaaaactaggtattccaagaattcattattacagctcaagccaattctccaactgtgc-agctcatttgat |
299 |
Q |
| |
|
| | ||||| |||||||| ||| |||||||||||||| |||||||| ||| | | ||||||||||||| | |||||||| ||||| |||| |||| | |
|
|
| T |
26203883 |
gacttatccttggacagttgaatcagctgcaaaactaaacattccaaggatttacttttacagctcaagctacttctccaattgtgcgagct-attttgt |
26203981 |
T |
|
| Q |
300 |
catgaagtatagacctcatgataatttagtctctg |
334 |
Q |
| |
|
| |||||||||||||||||||||||||| |||| |
|
|
| T |
26203982 |
tagaaagtatagacctcatgataatttagtttctg |
26204016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 9 - 334
Target Start/End: Original strand, 26191062 - 26191387
Alignment:
| Q |
9 |
aggatactccatcaaaactcatctgattcagttcccttcagctcaagtttgtcttccagatggtgttgaaaacatgaaagatggaatttcatttgaaata |
108 |
Q |
| |
|
|||||||||||||||||||||||| ||| | |||||||||||||||||| |||||||||||||||||||||| | |||||||||| || | ||||| |
|
|
| T |
26191062 |
aggatactccatcaaaactcatcttattgaattcccttcagctcaagttggtcttccagatggtgttgaaaatctcaaagatggaacatcctcagaaatt |
26191161 |
T |
|
| Q |
109 |
ctaggtaaaatcacccgcgcagtaatgatgctccaaaatccaattgagattttgtttcaagatcttcaacctgattgtatagtcactgatatgtcgtatc |
208 |
Q |
| |
|
|| ||||||||| ||| | | || |||||| | | |||| |||||| || ||||| ||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
26191162 |
cttagtaaaatcaaccgtggaatatcgatgcttcgagatccgattgaggttctgtttaaagatcttcaaccagattgtatagtcactgatatgatgtatc |
26191261 |
T |
|
| Q |
209 |
cgtggacagtggaagcagctgcaaaactaggtattccaagaattcattattacagctcaagccaattctccaactgtgcagctcatttgatcatgaagta |
308 |
Q |
| |
|
| ||||||||||||||||||||||||||| |||||||| ||||| | ||| |||||||| | ||||||| |||||| |||||| |||||||| || |
|
|
| T |
26191262 |
cttggacagtggaagcagctgcaaaactaaacattccaaggattcacttttatagctcaagttacttctccagctgtgcctttcattttatcatgaaata |
26191361 |
T |
|
| Q |
309 |
tagacctcatgataatttagtctctg |
334 |
Q |
| |
|
||| ||||||||||||||||| |||| |
|
|
| T |
26191362 |
taggcctcatgataatttagtttctg |
26191387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 26301600 - 26301886
Alignment:
| Q |
1 |
ttcaattcaggatactccatcaaaactcatctgattcagttcccttcagctcaagtttgtcttccagatggtgttgaaaacatgaaagatggaatttcat |
100 |
Q |
| |
|
||||||||||||||| | || |||||||| || |||||||||||||||||||||||| |||| || ||||||||||||||| | || ||||||| |||| |
|
|
| T |
26301600 |
ttcaattcaggataccctattaaaactcaacttattcagttcccttcagctcaagttggtctccctgatggtgttgaaaacttcaatgatggaacttcac |
26301699 |
T |
|
| Q |
101 |
ttgaaatactaggtaaaatcacccg-cgcagtaatgatgctccaaaatccaattgagattttgtttcaagatcttcaacctgattgtatagtcactgata |
199 |
Q |
| |
|
|||||||||| |||||||||| ||| || | || |||||||||| || |||| ||| ||||||||||||| |||||||| |||||||||||||| |||| |
|
|
| T |
26301700 |
ttgaaatacttggtaaaatcagccgtcgga-taccgatgctccaagattcaatcgaggttttgtttcaagaacttcaaccagattgtatagtcaccgata |
26301798 |
T |
|
| Q |
200 |
tgtcgtatccgtggacagtggaagcagctgcaaaactaggtattccaagaattcattattacagctcaagccaattctccaactgtgc |
287 |
Q |
| |
|
|| |||||| |||||||| ||| ||||| ||||||| ||||| || || | | ||||||||||||| | |||||||||||||| |
|
|
| T |
26301799 |
tgctgtatccttggacagttgaatcagcttcaaaactgaacattccgaggatgtacttttacagctcaagctacttctccaactgtgc |
26301886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 334
Target Start/End: Original strand, 26223321 - 26223654
Alignment:
| Q |
1 |
ttcaattcaggatactccatcaaaactcatctgattcagttcccttcagctcaagtttgtcttccagatggtgttgaaaacatgaaagatggaatttcat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||||||||||||| || |||| || |||||| |||||||||| |||||||||| | | |
|
|
| T |
26223321 |
ttcaattcaggatactccatcaaaactcatcttatacagttcccttcagctcaggtaggtctccctgatggtattgaaaacatcaaagatggaactacca |
26223420 |
T |
|
| Q |
101 |
ttgaaatactaggtaaaatcacccgcgcagtaatgatgctccaaaatccaattgagattttgtttcaagatcttcaacctgattgtatagtcactgatat |
200 |
Q |
| |
|
||||| || || ||||| | | | | |||||||||| ||| ||| |||||| ||| ||||||||||||||||||| ||||||||| | || ||||| |
|
|
| T |
26223421 |
gagaaattcttgggaaaatttctcatggaataatgatgcttcaagatcaaattgaaattctgtttcaagatcttcaaccagattgtataataacggatat |
26223520 |
T |
|
| Q |
201 |
gtcgtatccgtggacagtggaagcagctgcaaaactaggtattccaagaattcattattacagctcaagccaattctccaactgtgc-agctcatttgat |
299 |
Q |
| |
|
| | ||||| |||||||| ||| |||||||||||||| |||||||| ||| | | ||||||||||||| | |||||||| ||||| |||| |||| | |
|
|
| T |
26223521 |
gacttatccttggacagttgaatcagctgcaaaactaaacattccaaggatttacttttacagctcaagctacttctccaattgtgcaagct-attttgt |
26223619 |
T |
|
| Q |
300 |
catgaagtatagacctcatgataatttagtctctg |
334 |
Q |
| |
|
| |||||||||||||||||||||||||| |||| |
|
|
| T |
26223620 |
tagaaagtatagacctcatgataatttagtttctg |
26223654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 211 - 326
Target Start/End: Original strand, 26087780 - 26087895
Alignment:
| Q |
211 |
tggacagtggaagcagctgcaaaactaggtattccaagaattcattattacagctcaagccaattctccaactgtgcagctcatttgatcatgaagtata |
310 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
26087780 |
tggacggtcgaagcagctgcaaaactaggtattccaagaattcactattacagctcaagctacttctccaactgtgcagaacattttatcatgaagtata |
26087879 |
T |
|
| Q |
311 |
gacctcatgataattt |
326 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
26087880 |
gacctcatgataattt |
26087895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 211 - 326
Target Start/End: Original strand, 26111568 - 26111683
Alignment:
| Q |
211 |
tggacagtggaagcagctgcaaaactaggtattccaagaattcattattacagctcaagccaattctccaactgtgcagctcatttgatcatgaagtata |
310 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
26111568 |
tggacggtcgaagcagctgcaaaactaggtattccaagaattcactattacagctcaagctacttctccaactgtgcagaacattttatcatgaagtata |
26111667 |
T |
|
| Q |
311 |
gacctcatgataattt |
326 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
26111668 |
gacctcatgataattt |
26111683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 286
Target Start/End: Original strand, 26242194 - 26242471
Alignment:
| Q |
9 |
aggatactccatcaaaactcatctgattcagttcccttcagctcaagtttgtcttccagatggtgttgaaaacatgaaagatggaatttcatttgaaata |
108 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||| ||||||||| |||| || || ||| ||||||||||||| |||| | |||| ||||| |
|
|
| T |
26242194 |
aggatactccatcaaaactcaacttcttcagttcccttctgctcaagttggtctccctgaaggtattgaaaacatgaacgatgccacttcacgagaaatg |
26242293 |
T |
|
| Q |
109 |
ctaggtaaaatcacccgcgcagtaatgatgctccaaaatccaattgagattttgtttcaagatcttcaacctgattgtatagtcactgatatgtcgtatc |
208 |
Q |
| |
|
|| ||||| |||| || | |||| ||||||| || || | |||| || ||||| ||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
26242294 |
cttagtaaagtcactcgtggagtatggatgctcaaagattcttttgaagttctgtttaaagatcttcaaccagattgtatagtcactgatatgatgtatc |
26242393 |
T |
|
| Q |
209 |
cgtggacagtggaagcagctgcaaaactaggtattccaagaattcattattacagctcaagccaattctccaactgtg |
286 |
Q |
| |
|
| ||||| |||||| |||||||||||||| ||||||||| ||||| | || |||||||||| | |||||| |||||| |
|
|
| T |
26242394 |
cttggactgtggaatcagctgcaaaactaaatattccaaggattcacttttgcagctcaagctacttctccgactgtg |
26242471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 34 - 334
Target Start/End: Original strand, 26259721 - 26260021
Alignment:
| Q |
34 |
attcagttcccttcagctcaagtttgtcttccagatggtgttgaaaacatgaaagatggaatttcatttgaaatactaggtaaaatcacccgcgcagtaa |
133 |
Q |
| |
|
||||| ||||||||||| |||||| |||||||||| ||||| |||||||| |||||||||| ||| || ||||| || ||||||||| | | | | |
|
|
| T |
26259721 |
attcaattcccttcagcacaagttggtcttccagaaggtgtcgaaaacatcaaagatggaacttccttagaaatgcttggtaaaatcggtcatggaattt |
26259820 |
T |
|
| Q |
134 |
tgatgctccaaaatccaattgagattttgtttcaagatcttcaacctgattgtatagtcactgatatgtcgtatccgtggacagtggaagcagctgcaaa |
233 |
Q |
| |
|
|||| ||| ||| |||||| ||| ||||||||||||||||||||||||| |||||| ||||||||| ||||| |||||||| ||| |||| || || |
|
|
| T |
26259821 |
cattgcttcaagatcaaattgaaattctgtttcaagatcttcaacctgattgcatagtctctgatatgttctatccttggacagttgaatcagcagcgaa |
26259920 |
T |
|
| Q |
234 |
actaggtattccaagaattcattattacagctcaagccaattctccaactgtgcagctcatttgatcatgaagtatagacctcatgataatttagtctct |
333 |
Q |
| |
|
||| ||| ||||||| || | ||||||||||||||| | || || | |||| |||||||| |||| ||||||| |||||||| |||||||| ||| |
|
|
| T |
26259921 |
actcggtgttccaaggatctactattacagctcaagctacttttctagctgttgtgctcattttatcagaaagtataagcctcatgagaatttagtttct |
26260020 |
T |
|
| Q |
334 |
g |
334 |
Q |
| |
|
| |
|
|
| T |
26260021 |
g |
26260021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 150 - 334
Target Start/End: Original strand, 26207373 - 26207557
Alignment:
| Q |
150 |
aattgagattttgtttcaagatcttcaacctgattgtatagtcactgatatgtcgtatccgtggacagtggaagcagctgcaaaactaggtattccaaga |
249 |
Q |
| |
|
||||||||||||||| | ||||| ||||| |||||||||||| | ||||||| ||||| |||||||||||| ||||||||||||| || |||||||| |
|
|
| T |
26207373 |
aattgagattttgttccgtgatctccaaccagattgtatagtctcagatatgttatatccatggacagtggaatcagctgcaaaactcggcattccaagg |
26207472 |
T |
|
| Q |
250 |
attcattattacagctcaagccaattctccaactgtgcagctcatttgatcatgaagtatagacctcatgataatttagtctctg |
334 |
Q |
| |
|
|| | ||||||||||||||| | ||||| | ||||||||||| || |||| |||| | | |||||||| |||||||| |||| |
|
|
| T |
26207473 |
ctttactattacagctcaagctacttctcaagttgtgcagctcactttatcaagaagcaaaagcctcatgagaatttagtttctg |
26207557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 293
Target Start/End: Original strand, 26226768 - 26227051
Alignment:
| Q |
10 |
ggatactccatcaaaactcatctgattcagttcccttcagctcaagtttgtcttccagatggtgttgaaaacatgaaagatggaatttcatttgaaatac |
109 |
Q |
| |
|
||||| ||||||||| || | ||||||| |||||| |||| |||||| ||||||||||||||||||||||||| ||||||| | ||| |||||| | |
|
|
| T |
26226768 |
ggatattccatcaaagcttgtgtgattcaattccctgcagcccaagttggtcttccagatggtgttgaaaacatcaaagatgccacttcccgtgaaatgc |
26226867 |
T |
|
| Q |
110 |
taggtaaaatcacccgcgcagtaatgatgctccaaaatccaattgagattttgtttcaagatcttcaacctgattgtatagtcactgatatgtcgtatcc |
209 |
Q |
| |
|
| |||||||||| | | | | || | ||||| ||| ||||||||||||||| || ||||| |||| |||||||||||| | ||||||| | ||| |
|
|
| T |
26226868 |
ttggtaaaatcatgcttggaattgcgaagatccaagatcaaattgagattttgttccatgatctccaacaagattgtatagtctcagatatgttatttcc |
26226967 |
T |
|
| Q |
210 |
gtggacagtggaagcagctgcaaaactaggtattccaagaattcattattacagctcaagccaattctccaactgtgcagctca |
293 |
Q |
| |
|
||||||||| || |||||||||||| || ||||| || || | ||||||||||||||| | ||||| | ||||||||||| |
|
|
| T |
26226968 |
ttggacagtgcaatcagctgcaaaacgcggcattcctaggctttactattacagctcaagctacttctcaagttgtgcagctca |
26227051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 288
Target Start/End: Original strand, 26250642 - 26250921
Alignment:
| Q |
9 |
aggatactccatcaaaactcatctgattcagttcccttcagctcaagtttgtcttccagatggtgttgaaaacatgaaagatggaatttcatttgaaata |
108 |
Q |
| |
|
||||||||||||||||||||| || ||||||| ||||||||||||||| |||| || || |||||||||||| ||| |||| | ||| |||||| |
|
|
| T |
26250642 |
aggatactccatcaaaactcaacttcttcagtttccttcagctcaagttggtctacctgacggtgttgaaaactcgaacgatgctacttcccgtgaaatg |
26250741 |
T |
|
| Q |
109 |
ctaggtaaaatcacccgcgcagtaatgatgctccaaaatccaattgagattttgtttcaagatcttcaacctgattgtatagtcactgatatgtcgtatc |
208 |
Q |
| |
|
|| ||||| |||| || | |||| ||||||| | || | ||||| |||| |||||||| |||||||| ||||||||||| || |||||| ||||| |
|
|
| T |
26250742 |
cttagtaaagtcactcgtggagtatggatgctcagagattctattgaagttttatttcaagaacttcaaccagattgtatagtgacagatatgaagtatc |
26250841 |
T |
|
| Q |
209 |
cgtggacagtggaagcagctgcaaaactaggtattccaagaattcattattacagctcaagccaattctccaactgtgca |
288 |
Q |
| |
|
| ||||| || ||| |||||||||||||| |||||||| ||| | | || |||||||||| | |||||| | |||||| |
|
|
| T |
26250842 |
cttggactgtagaatcagctgcaaaactaaacattccaaggatttacttttgcagctcaagctacttctccgaatgtgca |
26250921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 26082519 - 26082709
Alignment:
| Q |
1 |
ttcaattcaggatactccatcaaaactcatctgattcagttcccttcagctcaagtttgtcttccagatggtgttgaaaacatgaaagatggaatttcat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||||||| ||| |||| || |||| || ||||||||||||||| | |||||||||| |||| |
|
|
| T |
26082519 |
ttcaattcaggatactccatcaaaactcagcttattcagttcccgtcatctcaggtaggtctccctgatggtgttgaaaacctcaaagatggaacttcaa |
26082618 |
T |
|
| Q |
101 |
ttgaaatactaggtaaaatcacccgcgcagtaatgatgctccaaaatccaattgag---attttgtttcaagatcttcaacctgattgtat |
188 |
Q |
| |
|
||||| | ||||||| |||| | | || ||||||||| |||| |||||| | |||||||||||| ||||||||||||||||| |
|
|
| T |
26082619 |
cagaaattattagtaaaattgcccgtggaatagccatgctccaagatccgattgaggctaatttgtttcaagaacttcaacctgattgtat |
26082709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 26106306 - 26106496
Alignment:
| Q |
1 |
ttcaattcaggatactccatcaaaactcatctgattcagttcccttcagctcaagtttgtcttccagatggtgttgaaaacatgaaagatggaatttcat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||||||| ||| |||| || |||| || ||||||||||||||| | |||||||||| |||| |
|
|
| T |
26106306 |
ttcaattcaggatactccatcaaaactcagcttattcagttcccgtcatctcaggtaggtctccctgatggtgttgaaaacctcaaagatggaacttcaa |
26106405 |
T |
|
| Q |
101 |
ttgaaatactaggtaaaatcacccgcgcagtaatgatgctccaaaatccaattgag---attttgtttcaagatcttcaacctgattgtat |
188 |
Q |
| |
|
||||| | ||||||| |||| | | || ||||||||| |||| |||||| | |||||||||||| ||||||||||||||||| |
|
|
| T |
26106406 |
cagaaattattagtaaaattgcccgtggaatagccatgctccaagatccgattgaggctaatttgtttcaagaacttcaacctgattgtat |
26106496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 26240076 - 26240184
Alignment:
| Q |
1 |
ttcaattcaggatactccatcaaaactcatctgattcagttcccttcagctcaagtttgtcttccagatggtgttgaaaacatgaaagatggaatttcat |
100 |
Q |
| |
|
|||||||||| |||| | || ||||| || || |||| ||||||||| || ||||| |||| || |||||||||||||||||||||||||||| ||||| |
|
|
| T |
26240076 |
ttcaattcagcataccctattaaaacccaacttcttcaattcccttcaacttaagttggtctccctgatggtgttgaaaacatgaaagatggaacttcat |
26240175 |
T |
|
| Q |
101 |
ttgaaatac |
109 |
Q |
| |
|
||||||||| |
|
|
| T |
26240176 |
ttgaaatac |
26240184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 288
Target Start/End: Original strand, 26297242 - 26297521
Alignment:
| Q |
9 |
aggatactccatcaaaactcatctgattcagttcccttcagctcaagtttgtcttccagatggtgttgaaaacatgaaagatggaatttcatttgaaata |
108 |
Q |
| |
|
||||||||||||||||||| | || ||||||||||| || | ||||| |||| ||||| ||| ||||||||| || |||| | |||| ||||||| |
|
|
| T |
26297242 |
aggatactccatcaaaactaaacttcttcagttccctgcaaatgaagttggtctcccagagggtattgaaaacacgatcgatgccacttcacttgaaatg |
26297341 |
T |
|
| Q |
109 |
ctaggtaaaatcacccgcgcagtaatgatgctccaaaatccaattgagattttgtttcaagatcttcaacctgattgtatagtcactgatatgtcgtatc |
208 |
Q |
| |
|
|| | ||||||||| | ||||| ||||||||| | | ||||| || | ||| |||| |||||||| ||||||||||| || |||||| || | |
|
|
| T |
26297342 |
cttgttaaaatcacgattggagtaaggatgctccagcaatctattgaagttctatttaaagaacttcaaccagattgtatagtgacagatatgaaatacc |
26297441 |
T |
|
| Q |
209 |
cgtggacagtggaagcagctgcaaaactaggtattccaagaattcattattacagctcaagccaattctccaactgtgca |
288 |
Q |
| |
|
| ||||| |||||| |||||||||||||| |||||||| ||| | | ||||||||||||| | |||||| | |||||| |
|
|
| T |
26297442 |
cttggactgtggaatcagctgcaaaactaaacattccaaggattgacttttacagctcaagctacttctcctattgtgca |
26297521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 26207233 - 26207314
Alignment:
| Q |
10 |
ggatactccatcaaaactcatctgattcagttcccttcagctcaagtttgtcttccagatggtgttgaaaacatgaaagatg |
91 |
Q |
| |
|
||||| |||||||||||| | ||||||| |||||| ||| ||||| |||| |||||||||||||||||||| ||||||| |
|
|
| T |
26207233 |
ggatattccatcaaaacttgtgtgattcaattccctggagcccaagtaggtctcccagatggtgttgaaaacatcaaagatg |
26207314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 161 - 334
Target Start/End: Original strand, 44903199 - 44903372
Alignment:
| Q |
161 |
tgtttcaagatcttcaacctgattgtatagtcactgatatgtcgtatccgtggacagtggaagcagctgcaaaactaggtattccaagaattcattatta |
260 |
Q |
| |
|
||||||||||||||||||| ||||||||||| ||||||||| | ||| ||||| |||||| |||||||||||||| | ||||| || || ||||||| |
|
|
| T |
44903199 |
tgtttcaagatcttcaaccagattgtatagtaactgatatgatgattccttggactgtggaatcagctgcaaaactaagcattcctaggctttattatta |
44903298 |
T |
|
| Q |
261 |
cagctcaagccaattctccaactgtgcagctcatttgatcatgaagtatagacctcatgataatttagtctctg |
334 |
Q |
| |
|
|||||||||| | |||||||| |||||| | |||| | | |||||||||||||||||| ||||||| |||| |
|
|
| T |
44903299 |
cagctcaagctacttctccaattgtgcatgttattttgttagaaagtatagacctcatgatcatttagtttctg |
44903372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 44903030 - 44903109
Alignment:
| Q |
1 |
ttcaattcaggatactccatcaaaactcatctgattcagttcccttcagctcaagtttgtcttccagatggtgttgaaaa |
80 |
Q |
| |
|
||||||||||||||||| ||||||||||| || ||||||||||||||| | |||||| ||||||| ||||| ||||||| |
|
|
| T |
44903030 |
ttcaattcaggatactctatcaaaactcagcttattcagttcccttcatcccaagttggtcttcctgatggaattgaaaa |
44903109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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