View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6166_low_26 (Length: 243)
Name: NF6166_low_26
Description: NF6166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6166_low_26 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 30896579 - 30896337
Alignment:
| Q |
1 |
attgtttcaccaattttactctgtgggataaatcaaagcaaacaaataatgtacatgtagtgtacatatgaaacatggttttcctattcaaccaatacta |
100 |
Q |
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| T |
30896579 |
attgtttcaccaattttactctgtgggataaatcaaagcaaacaaataatgtacatgtagtgtacatatgaaacatggttttcctattcaaccaatacta |
30896480 |
T |
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| Q |
101 |
atgagtggcctattatctttttggtttgcctagaatcatggttggnnnnnnnnttaatattaatgacttgtgaatcccttaagttggtttttatttgatg |
200 |
Q |
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| T |
30896479 |
atgagtggcctattatctttttggtttgcctagaatcatggttggaaaaaaaattaatattaatgacttgtgaatcccttaagttggtttttatttgatg |
30896380 |
T |
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| Q |
201 |
ttaggggcatcaaaatggacactgaatgtttcttaaacgtaag |
243 |
Q |
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||||||||||| |||| |||||||||||||||||||||||||| |
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| T |
30896379 |
ttaggggcatctaaattgacactgaatgtttcttaaacgtaag |
30896337 |
T |
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