View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6169_low_2 (Length: 537)

Name: NF6169_low_2
Description: NF6169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6169_low_2
NF6169_low_2
[»] chr5 (29 HSPs)
chr5 (17-194)||(37430838-37431015)
chr5 (210-257)||(32872785-32872832)
chr5 (429-519)||(37431018-37431106)
chr5 (206-258)||(36562936-36562988)
chr5 (334-385)||(24486894-24486944)
chr5 (327-365)||(34379482-34379520)
chr5 (325-386)||(5007734-5007794)
chr5 (327-364)||(32912068-32912105)
chr5 (324-364)||(11954461-11954501)
chr5 (208-248)||(16971985-16972025)
chr5 (327-386)||(4434479-4434537)
chr5 (327-386)||(14206397-14206455)
chr5 (327-362)||(22649666-22649701)
chr5 (327-385)||(3640201-3640258)
chr5 (210-248)||(11954577-11954615)
chr5 (329-386)||(14923080-14923135)
chr5 (327-385)||(32732123-32732180)
chr5 (327-365)||(40829443-40829481)
chr5 (328-365)||(6940155-6940192)
chr5 (331-364)||(7076577-7076610)
chr5 (327-364)||(8675437-8675474)
chr5 (327-364)||(14532534-14532571)
chr5 (208-257)||(31748473-31748522)
chr5 (327-364)||(34124651-34124688)
chr5 (327-384)||(43153065-43153121)
chr5 (327-383)||(8442170-8442225)
chr5 (214-258)||(32284713-32284757)
chr5 (335-379)||(35567515-35567559)
chr5 (328-364)||(38363111-38363147)
[»] chr7 (37 HSPs)
chr7 (207-258)||(29723809-29723860)
chr7 (209-258)||(2008718-2008767)
chr7 (330-386)||(26749014-26749068)
chr7 (210-258)||(12007073-12007121)
chr7 (210-258)||(15325527-15325575)
chr7 (207-258)||(37352246-37352297)
chr7 (327-385)||(11352978-11353035)
chr7 (327-365)||(18111616-18111654)
chr7 (322-364)||(46880932-46880974)
chr7 (213-258)||(28249460-28249505)
chr7 (327-383)||(33465044-33465099)
chr7 (210-258)||(33845178-33845226)
chr7 (321-385)||(41985099-41985162)
chr7 (327-386)||(43942646-43942703)
chr7 (209-245)||(46881051-46881087)
chr7 (327-386)||(3937126-3937184)
chr7 (328-386)||(2323301-2323358)
chr7 (208-258)||(32777592-32777642)
chr7 (325-386)||(2469700-2469760)
chr7 (213-258)||(21103148-21103193)
chr7 (327-364)||(24532947-24532984)
chr7 (321-386)||(37351989-37352053)
chr7 (327-364)||(40353294-40353331)
chr7 (209-258)||(43807699-43807748)
chr7 (327-384)||(45420065-45420121)
chr7 (327-364)||(47145077-47145114)
chr7 (327-384)||(49142522-49142578)
chr7 (321-385)||(22330630-22330693)
chr7 (210-258)||(26749140-26749188)
chr7 (210-258)||(27570479-27570527)
chr7 (328-364)||(29723932-29723968)
chr7 (327-387)||(29923678-29923737)
chr7 (328-384)||(33224834-33224889)
chr7 (327-359)||(34108859-34108891)
chr7 (328-364)||(35452578-35452614)
chr7 (327-359)||(40854659-40854691)
chr7 (322-362)||(43807812-43807852)
[»] chr4 (38 HSPs)
chr4 (210-258)||(39158241-39158289)
chr4 (210-258)||(51255882-51255930)
chr4 (210-258)||(18316073-18316121)
chr4 (331-384)||(25318073-25318128)
chr4 (210-258)||(38519929-38519977)
chr4 (211-248)||(21014143-21014180)
chr4 (327-364)||(40348823-40348860)
chr4 (327-383)||(48335564-48335621)
chr4 (207-248)||(55266171-55266212)
chr4 (322-382)||(5386385-5386444)
chr4 (210-258)||(29227130-29227178)
chr4 (327-382)||(9095949-9096003)
chr4 (210-257)||(22813609-22813656)
chr4 (327-393)||(39605969-39606033)
chr4 (327-386)||(43769720-43769778)
chr4 (327-385)||(28657445-28657502)
chr4 (327-385)||(37727059-37727117)
chr4 (322-364)||(39158135-39158177)
chr4 (327-365)||(49585023-49585061)
chr4 (325-359)||(56557768-56557802)
chr4 (327-364)||(149489-149526)
chr4 (327-383)||(1580288-1580342)
chr4 (329-385)||(4106052-4106106)
chr4 (328-385)||(4949516-4949572)
chr4 (327-364)||(7627878-7627915)
chr4 (327-364)||(26206981-26207018)
chr4 (209-258)||(26600085-26600134)
chr4 (327-384)||(31657657-31657713)
chr4 (325-362)||(41262347-41262384)
chr4 (327-383)||(50608629-50608683)
chr4 (210-258)||(5386508-5386556)
chr4 (210-258)||(14443334-14443382)
chr4 (327-383)||(24310526-24310581)
chr4 (327-359)||(37297083-37297115)
chr4 (327-383)||(37731926-37731981)
chr4 (322-362)||(50050669-50050709)
chr4 (210-258)||(50506524-50506572)
chr4 (214-258)||(54000834-54000878)
[»] chr3 (37 HSPs)
chr3 (210-258)||(29525999-29526047)
chr3 (325-383)||(9753230-9753287)
chr3 (208-258)||(34307426-34307476)
chr3 (210-258)||(4494124-4494172)
chr3 (327-389)||(19148996-19149056)
chr3 (327-382)||(35377086-35377141)
chr3 (327-386)||(50745557-50745615)
chr3 (322-364)||(38671647-38671689)
chr3 (327-386)||(3281720-3281778)
chr3 (213-248)||(27168572-27168607)
chr3 (325-384)||(47683800-47683858)
chr3 (327-386)||(49361840-49361898)
chr3 (327-386)||(49761316-49761374)
chr3 (328-362)||(10464975-10465009)
chr3 (327-385)||(29846896-29846953)
chr3 (327-364)||(3953479-3953516)
chr3 (327-364)||(24095410-24095447)
chr3 (331-383)||(24256780-24256830)
chr3 (327-384)||(28700471-28700527)
chr3 (327-384)||(35368621-35368677)
chr3 (357-386)||(38470597-38470626)
chr3 (213-258)||(39713927-39713972)
chr3 (327-364)||(50314654-50314691)
chr3 (327-359)||(6178430-6178462)
chr3 (327-359)||(8846526-8846558)
chr3 (327-383)||(29057659-29057714)
chr3 (210-258)||(31104800-31104848)
chr3 (210-254)||(32145873-32145917)
chr3 (321-353)||(33007400-33007432)
chr3 (321-353)||(39540275-39540307)
chr3 (321-385)||(43169752-43169815)
chr3 (327-359)||(44677488-44677520)
chr3 (327-359)||(45711444-45711476)
chr3 (327-383)||(47484290-47484346)
chr3 (327-383)||(48893354-48893409)
chr3 (328-384)||(50146487-50146542)
chr3 (210-258)||(53681187-53681235)
[»] chr8 (35 HSPs)
chr8 (210-257)||(33451452-33451499)
chr8 (210-258)||(1068742-1068790)
chr8 (328-384)||(7010684-7010739)
chr8 (327-385)||(9963694-9963752)
chr8 (209-248)||(42652739-42652778)
chr8 (321-386)||(40413348-40413412)
chr8 (327-383)||(6243045-6243100)
chr8 (210-258)||(15716863-15716911)
chr8 (210-258)||(33107754-33107802)
chr8 (210-258)||(34435624-34435672)
chr8 (210-258)||(44091022-44091070)
chr8 (327-386)||(14710898-14710956)
chr8 (211-242)||(36874001-36874032)
chr8 (327-382)||(39211054-39211108)
chr8 (328-381)||(17823469-17823520)
chr8 (327-365)||(28756564-28756602)
chr8 (327-385)||(30439510-30439567)
chr8 (327-385)||(37392133-37392190)
chr8 (331-364)||(8645195-8645228)
chr8 (208-257)||(11134720-11134769)
chr8 (322-359)||(34435736-34435773)
chr8 (327-388)||(38939194-38939254)
chr8 (327-364)||(41520998-41521035)
chr8 (327-359)||(9549203-9549235)
chr8 (356-388)||(10692434-10692466)
chr8 (327-359)||(16327156-16327188)
chr8 (210-258)||(26027032-26027080)
chr8 (327-359)||(27776187-27776219)
chr8 (210-258)||(28772013-28772061)
chr8 (327-359)||(33589234-33589266)
chr8 (327-359)||(34018843-34018875)
chr8 (322-386)||(36874110-36874173)
chr8 (327-383)||(37471654-37471709)
chr8 (327-383)||(38174238-38174294)
chr8 (322-358)||(44090922-44090958)
[»] chr2 (27 HSPs)
chr2 (210-248)||(26480977-26481015)
chr2 (208-258)||(44239172-44239222)
chr2 (209-258)||(2427885-2427934)
chr2 (205-258)||(11965929-11965982)
chr2 (328-385)||(42607536-42607592)
chr2 (327-386)||(6049349-6049408)
chr2 (327-386)||(10711733-10711791)
chr2 (209-258)||(37731086-37731135)
chr2 (327-383)||(37737982-37738036)
chr2 (214-258)||(14877125-14877169)
chr2 (210-258)||(31578570-31578618)
chr2 (210-258)||(37316702-37316750)
chr2 (330-382)||(13265975-13266029)
chr2 (356-387)||(17569749-17569780)
chr2 (322-365)||(19916684-19916727)
chr2 (322-361)||(37003643-37003682)
chr2 (328-386)||(6646832-6646889)
chr2 (327-365)||(21738620-21738658)
chr2 (327-365)||(40210072-40210110)
chr2 (327-384)||(22296134-22296190)
chr2 (327-384)||(22353180-22353236)
chr2 (322-359)||(37731199-37731236)
chr2 (328-364)||(433880-433916)
chr2 (327-386)||(4263869-4263926)
chr2 (327-359)||(35589391-35589423)
chr2 (210-258)||(36587358-36587406)
chr2 (327-359)||(41195618-41195650)
[»] chr1 (37 HSPs)
chr1 (210-248)||(4213218-4213256)
chr1 (214-258)||(7918953-7918997)
chr1 (327-383)||(47398456-47398511)
chr1 (210-258)||(47642494-47642542)
chr1 (210-258)||(48983555-48983603)
chr1 (207-258)||(38878785-38878836)
chr1 (328-386)||(50797788-50797845)
chr1 (328-364)||(8846003-8846039)
chr1 (327-383)||(18336158-18336213)
chr1 (210-258)||(27742745-27742793)
chr1 (210-258)||(40439727-40439775)
chr1 (210-258)||(42468728-42468776)
chr1 (327-383)||(51718631-51718687)
chr1 (327-386)||(8200084-8200142)
chr1 (327-386)||(11121489-11121547)
chr1 (327-386)||(38303692-38303751)
chr1 (327-386)||(40596059-40596117)
chr1 (327-386)||(48325783-48325841)
chr1 (328-386)||(611641-611698)
chr1 (322-364)||(4213102-4213144)
chr1 (322-384)||(4857921-4857982)
chr1 (327-385)||(33358163-33358220)
chr1 (321-383)||(37690429-37690490)
chr1 (331-388)||(48103398-48103453)
chr1 (327-365)||(52437523-52437561)
chr1 (327-364)||(5771752-5771789)
chr1 (327-364)||(40328745-40328782)
chr1 (328-365)||(46281465-46281502)
chr1 (327-384)||(48220148-48220204)
chr1 (209-258)||(48858959-48859008)
chr1 (331-364)||(50824771-50824804)
chr1 (327-383)||(16836120-16836175)
chr1 (327-359)||(29586028-29586060)
chr1 (327-383)||(30196724-30196780)
chr1 (321-353)||(37515956-37515988)
chr1 (327-383)||(41507199-41507254)
chr1 (327-359)||(47215733-47215765)
[»] chr6 (16 HSPs)
chr6 (208-248)||(17182244-17182284)
chr6 (210-248)||(1287059-1287097)
chr6 (210-258)||(33712456-33712504)
chr6 (327-362)||(5570338-5570373)
chr6 (210-257)||(5739651-5739698)
chr6 (208-258)||(8645444-8645494)
chr6 (325-359)||(34442065-34442099)
chr6 (213-258)||(18064980-18065025)
chr6 (327-383)||(2163702-2163757)
chr6 (327-383)||(2175335-2175390)
chr6 (327-359)||(2777320-2777352)
chr6 (327-359)||(11547533-11547565)
chr6 (324-364)||(17182129-17182169)
chr6 (327-363)||(28630129-28630165)
chr6 (327-383)||(32135436-32135491)
chr6 (327-383)||(32644623-32644678)
[»] scaffold0204 (1 HSPs)
scaffold0204 (327-383)||(23086-23143)
[»] scaffold0201 (1 HSPs)
scaffold0201 (209-258)||(8608-8657)
[»] scaffold0618 (2 HSPs)
scaffold0618 (210-258)||(8840-8888)
scaffold0618 (322-358)||(8952-8988)
[»] scaffold0276 (1 HSPs)
scaffold0276 (327-385)||(1656-1711)
[»] scaffold0184 (1 HSPs)
scaffold0184 (210-258)||(13444-13492)
[»] scaffold0078 (1 HSPs)
scaffold0078 (210-258)||(59352-59400)
[»] scaffold0034 (1 HSPs)
scaffold0034 (212-252)||(101790-101830)
[»] scaffold0054 (1 HSPs)
scaffold0054 (327-385)||(31605-31662)
[»] scaffold0286 (1 HSPs)
scaffold0286 (327-383)||(18652-18707)


Alignment Details
Target: chr5 (Bit Score: 178; Significance: 9e-96; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 17 - 194
Target Start/End: Original strand, 37430838 - 37431015
Alignment:
Q  17 ataaattaagacatttacattcacattccatatttgttactgataaatttatgctgcatgctaaattttagaagtatttaatttgaataagcatatgcaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37430838 ataaattaagacatttacattcacattccatatttgttactgataaatttatgctgcatgctaaattttagaagtatttaatttgaataagcatatgcaa 37430937  T
Q  117 atagtactttgtaaattataaaccaaatgaaataattagtcattcagtttcattgttactaatatcacaatatactgt 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37430938 atagtactttgtaaattataaaccaaatgaaataattagtcattcagtttcattgttactaatatcacaatatactgt 37431015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 210 - 257
Target Start/End: Original strand, 32872785 - 32872832
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaa 257  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  32872785 gagcaatgttatttgaacaaccctttcttgtgacaacttgttggacaa 32872832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 429 - 519
Target Start/End: Original strand, 37431018 - 37431106
Alignment:
Q  429 agttaatcatattcgagacatattattgggcaatcaaatatgaatacttttcaagttggtattccaactattcatcactttgcgaaagact 519  Q
    |||||||| | ||||||||||  |||| | ||||||||||||||||||| ||||||||||||||||| |||| ||||| |||||| |||||    
T  37431018 agttaatcttgttcgagacat--tattagacaatcaaatatgaatacttctcaagttggtattccaattatttatcacgttgcgagagact 37431106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 36562936 - 36562988
Alignment:
Q  206 caatgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||    
T  36562936 caatgaggaatgttatttgaacaaccctttgttgggacaacttgttggacaac 36562988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 334 - 385
Target Start/End: Complemental strand, 24486944 - 24486894
Alignment:
Q  334 gtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 385  Q
    |||||||| ||||||||||  |||||||||||||||||||||||||||||||    
T  24486944 gtatgagaaagaaaattgta-caaaaattattgttcaaatatcatttctctt 24486894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 34379520 - 34379482
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 365  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  34379520 aatgtgagtatgagagagaaaattgtcacaaaaattatt 34379482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 5007734 - 5007794
Alignment:
Q  325 acaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||| || |||||| ||||||||||||| ||||| || |||||||||||||||||||||||    
T  5007734 acaatatgtgtatgaaagagaaaattgtcacaaaa-ttgttgttcaaatatcatttctcttt 5007794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 327 - 364
Target Start/End: Complemental strand, 32912105 - 32912068
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  32912105 aatgtgagtatgagagagaaaattgtcacaaaaattat 32912068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 364
Target Start/End: Complemental strand, 11954501 - 11954461
Alignment:
Q  324 aacaatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  11954501 aacaatgtgagtatgagagagaaagttgtcacaaaaattat 11954461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 16971985 - 16972025
Alignment:
Q  208 atgagcaatgttatttgaacaaccctttattgtgacaactt 248  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  16971985 atgagcaatgttatttgaacaatcatttattgtgacaactt 16972025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 4434537 - 4434479
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||||||||||||||| |||||||||  ||||||  |||| ||||||||||||||||||    
T  4434537 aatgtgagtatgagagaaaaaattgtc-aaaaaatggttgtacaaatatcatttctcttt 4434479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 14206455 - 14206397
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||||||||||||||||||| |||||  ||||||  |||| ||||||||||||||||||    
T  14206455 aatgtgagtatgagagagaaagttgtc-aaaaaatggttgtacaaatatcatttctcttt 14206397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 362
Target Start/End: Original strand, 22649666 - 22649701
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaatt 362  Q
    ||||||||||||||||||||||||||| ||||||||    
T  22649666 aatgtgagtatgagagagaaaattgtcacaaaaatt 22649701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 3640201 - 3640258
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 385  Q
    ||||||||||||||||||||| ||||| | |||||   |||||||||||||||||||||    
T  3640201 aatgtgagtatgagagagaaagttgtctc-aaaatagatgttcaaatatcatttctctt 3640258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 11954615 - 11954577
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaactt 248  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  11954615 gagcaatgttatttgaacaaccatttattttgacaactt 11954577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 386
Target Start/End: Complemental strand, 14923135 - 14923080
Alignment:
Q  329 tgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||||||||||||||||| ||||   ||||||  |||||||||||||||||||||||    
T  14923135 tgtgagtatgagagagaaagttgta--aaaaatggttgttcaaatatcatttctcttt 14923080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 32732123 - 32732180
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 385  Q
    ||||||||||||||||||||| ||||  ||||||| ||||| ||||||| |||||||||    
T  32732123 aatgtgagtatgagagagaaagttgt-acaaaaatgattgtacaaatataatttctctt 32732180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 40829481 - 40829443
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 365  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  40829481 aatgtgagtatgagagaaaaaattgtcacaaaaattatt 40829443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 365
Target Start/End: Original strand, 6940155 - 6940192
Alignment:
Q  328 atgtgagtatgagagagaaaattgtcgcaaaaattatt 365  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  6940155 atgtgagtatgagagagaaagttgtcacaaaaattatt 6940192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 7076577 - 7076610
Alignment:
Q  331 tgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    ||||||||||||||||||||||| ||||||||||    
T  7076577 tgagtatgagagagaaaattgtcacaaaaattat 7076610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 364
Target Start/End: Original strand, 8675437 - 8675474
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  8675437 aatgtgagtatgagagagaaaattgttgcaaaagttat 8675474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 364
Target Start/End: Complemental strand, 14532571 - 14532534
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  14532571 aatgtgagtatgagagagaaagttgtcacaaaaattat 14532534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 31748522 - 31748473
Alignment:
Q  208 atgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaa 257  Q
    |||||| ||||||||||||||| | ||| |||||||||||| ||||||||    
T  31748522 atgagcgatgttatttgaacaatcattttttgtgacaacttattggacaa 31748473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 364
Target Start/End: Complemental strand, 34124688 - 34124651
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    |||||||||||||||||||||||| || ||||||||||    
T  34124688 aatgtgagtatgagagagaaaattatcacaaaaattat 34124651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 384
Target Start/End: Original strand, 43153065 - 43153121
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 384  Q
    ||||||| ||||||||||||| ||||  |||||||| |||| ||||||||||||||||    
T  43153065 aatgtgaatatgagagagaaagttgta-caaaaattgttgtacaaatatcatttctct 43153121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 383
Target Start/End: Complemental strand, 8442225 - 8442170
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||||| ||||||||||||| ||||  ||||||| ||||| |||||||||||||||    
T  8442225 aatgtgaatatgagagagaaagttgta-caaaaataattgtacaaatatcatttctc 8442170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 32284713 - 32284757
Alignment:
Q  214 aatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||| ||||||| ||| ||| ||||||||||||||||||    
T  32284713 aatgttatttaaacaaccttttgttgagacaacttgttggacaac 32284757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 35567559 - 35567515
Alignment:
Q  335 tatgagagagaaaattgtcgcaaaaattattgttcaaatatcatt 379  Q
    ||||||||||||| || || |||||||||||||| ||||||||||    
T  35567559 tatgagagagaaagttatcacaaaaattattgtttaaatatcatt 35567515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 364
Target Start/End: Complemental strand, 38363147 - 38363111
Alignment:
Q  328 atgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    ||||||||||||||||||||||| || ||||||||||    
T  38363147 atgtgagtatgagagagaaaattatcacaaaaattat 38363111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 8e-16; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 207 - 258
Target Start/End: Original strand, 29723809 - 29723860
Alignment:
Q  207 aatgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  29723809 aatgagcaatgttatttgtacaaccatttattgtgacaacttgttggacaac 29723860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 2008718 - 2008767
Alignment:
Q  209 tgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  2008718 tgagcaatgttatttgaacaaccattttatgtgacaacttgttggacaac 2008767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 386
Target Start/End: Complemental strand, 26749068 - 26749014
Alignment:
Q  330 gtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    |||||||||||||||||| |||||  ||||||| |||||||||||||||||||||||    
T  26749068 gtgagtatgagagagaaagttgtc--aaaaattgttgttcaaatatcatttctcttt 26749014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 12007073 - 12007121
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  12007073 gagcaatgttatttgtacaactatttattgtgacaacttgttggacaac 12007121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 15325527 - 15325575
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||    
T  15325527 gagcaatgttatttgaacaacctttttatgtgacaacttgttggacaac 15325575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 207 - 258
Target Start/End: Complemental strand, 37352297 - 37352246
Alignment:
Q  207 aatgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    ||||||||||||||||||||||||| ||| ||||  ||||||||||||||||    
T  37352297 aatgagcaatgttatttgaacaaccatttcttgtaccaacttgttggacaac 37352246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 11352978 - 11353035
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 385  Q
    ||||||||||||||||||||| ||||| | ||||||  |||||||||||||||||||||    
T  11352978 aatgtgagtatgagagagaaagttgtcac-aaaattgatgttcaaatatcatttctctt 11353035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 18111616 - 18111654
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 365  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  18111616 aatgtgagtatgagagagaaaattgtcacaaaaattatt 18111654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 364
Target Start/End: Complemental strand, 46880974 - 46880932
Alignment:
Q  322 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    |||||||| |||||||||||||||||||| |||||||||||||    
T  46880974 agaacaatatgagtatgagagagaaaattatcgcaaaaattat 46880932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 28249460 - 28249505
Alignment:
Q  213 caatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    ||||||||||||||||||| ||| |||||||||||| |||||||||    
T  28249460 caatgttatttgaacaaccatttcttgtgacaactttttggacaac 28249505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 383
Target Start/End: Original strand, 33465044 - 33465099
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||||||||||||||||||||||||  |||||||  |||| |||||||||||||||    
T  33465044 aatgtgagtatgagagagaaaattgt-acaaaaatggttgtacaaatatcatttctc 33465099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 33845226 - 33845178
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||| |||  |||||||| ||||||||||||    
T  33845226 gagcaatgttatttgaacaaccttttcatgtgacaatttgttggacaac 33845178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 41985099 - 41985162
Alignment:
Q  321 gagaacaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 385  Q
    ||||| ||||||||||||||||||||| ||||| | ||| | ||||| |||||||||||||||||    
T  41985099 gagaataatgtgagtatgagagagaaagttgtcac-aaattgattgtacaaatatcatttctctt 41985162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 43942703 - 43942646
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||||||||||||||||||| ||||   ||||||  |||||||||||||||||||||||    
T  43942703 aatgtgagtatgagagagaaagttgta--aaaaatagttgttcaaatatcatttctcttt 43942646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 46881087 - 46881051
Alignment:
Q  209 tgagcaatgttatttgaacaaccctttattgtgacaa 245  Q
    |||||||||||||||||||||||||||||| ||||||    
T  46881087 tgagcaatgttatttgaacaaccctttattatgacaa 46881051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 3937126 - 3937184
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||||    
T  3937126 aatgtgagtatgagagagaaagttgtcac-aaaatagatgttcaaatatcatttctcttt 3937184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 2323358 - 2323301
Alignment:
Q  328 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    |||||||||||||||||||| |||||  |||| || |||| ||||||||||||||||||    
T  2323358 atgtgagtatgagagagaaagttgtcataaaa-ttgttgtacaaatatcatttctcttt 2323301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 32777592 - 32777642
Alignment:
Q  208 atgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||| | ||| |||| | |||||||||||||||    
T  32777592 atgagcaatgttatttgaacaatcttttcttgtaataacttgttggacaac 32777642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 2469760 - 2469700
Alignment:
Q  325 acaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||||||||||||||||||||| ||||| | ||| |  |||| ||||||||||||||||||    
T  2469760 acaatgtgagtatgagagagaaagttgtcac-aaagtggttgtacaaatatcatttctcttt 2469700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 21103193 - 21103148
Alignment:
Q  213 caatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    ||||| ||||||||||||| ||| |||||| |||||||||||||||    
T  21103193 caatgatatttgaacaaccatttcttgtgataacttgttggacaac 21103148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 364
Target Start/End: Original strand, 24532947 - 24532984
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  24532947 aatgtgagtatgagagaaaaaattgtcacaaaaattat 24532984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 37351989 - 37352053
Alignment:
Q  321 gagaacaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||| ||||||||||||||||||||| ||||| | ||| |  |||| ||||||||||||||||||    
T  37351989 gagaataatgtgagtatgagagagaaagttgtcac-aaagtggttgtacaaatatcatttctcttt 37352053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 364
Target Start/End: Complemental strand, 40353331 - 40353294
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  40353331 aatgtgagtatgagagagaaagttgttgcaaaaattat 40353294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 43807699 - 43807748
Alignment:
Q  209 tgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||| |||||||||||||||||||| || |||||| |||||| |||||    
T  43807699 tgagcagtgttatttgaacaaccctttcttatgacaatttgttgtacaac 43807748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 384
Target Start/End: Original strand, 45420065 - 45420121
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 384  Q
    ||||||| ||||||||||||| |||||  ||||||  |||||||||||||||||||||    
T  45420065 aatgtgaatatgagagagaaagttgtca-aaaaatagttgttcaaatatcatttctct 45420121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 364
Target Start/End: Original strand, 47145077 - 47145114
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  47145077 aatgtgagtgtgagagagaaaattgtcacaaaaattat 47145114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 384
Target Start/End: Original strand, 49142522 - 49142578
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 384  Q
    |||||||||||||||||||||||| |  |||||||  |||| ||||||||||||||||    
T  49142522 aatgtgagtatgagagagaaaatt-ttacaaaaatggttgtacaaatatcatttctct 49142578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 22330630 - 22330693
Alignment:
Q  321 gagaacaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 385  Q
    ||||| ||||||||||||||||||||| ||||| | ||| |  |||| |||||||||||||||||    
T  22330630 gagaataatgtgagtatgagagagaaagttgtcac-aaagtggttgtacaaatatcatttctctt 22330693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 26749188 - 26749140
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||| ||| |||||||||  | |||||||||    
T  26749188 gagcaatgttatttgaacaaccattttttgtgacaatcttttggacaac 26749140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 27570527 - 27570479
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||| || |||||  |||||||||||||||| |||||||||    
T  27570527 gagcaatgttatctgtacaactatttattgtgacaacttattggacaac 27570479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 364
Target Start/End: Original strand, 29723932 - 29723968
Alignment:
Q  328 atgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  29723932 atgtgagtatgagagagaaagttgtcacaaaaattat 29723968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 387
Target Start/End: Complemental strand, 29923737 - 29923678
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctttc 387  Q
    ||||||||||||||||||||| ||||  ||||||| ||||| ||||| |||||| ||||||    
T  29923737 aatgtgagtatgagagagaaagttgt-acaaaaatgattgtacaaatgtcatttatctttc 29923678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 384
Target Start/End: Complemental strand, 33224889 - 33224834
Alignment:
Q  328 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 384  Q
    |||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||    
T  33224889 atgtgagtatgagagagaaagttgtcac-aaaatagatgttcaaatatcatttctct 33224834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 359
Target Start/End: Original strand, 34108859 - 34108891
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    ||||||||||||||||||||||||||| |||||    
T  34108859 aatgtgagtatgagagagaaaattgtcacaaaa 34108891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 364
Target Start/End: Original strand, 35452578 - 35452614
Alignment:
Q  328 atgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  35452578 atgtgagtatgagagagaaagttgtcacaaaaattat 35452614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 359
Target Start/End: Original strand, 40854659 - 40854691
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    ||||||||||||||||||||||||||| |||||    
T  40854659 aatgtgagtatgagagagaaaattgtcacaaaa 40854691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 322 - 362
Target Start/End: Original strand, 43807812 - 43807852
Alignment:
Q  322 agaacaatgtgagtatgagagagaaaattgtcgcaaaaatt 362  Q
    |||||||||||||||||||||| |||||||||  |||||||    
T  43807812 agaacaatgtgagtatgagagaaaaaattgtcataaaaatt 43807852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 39158289 - 39158241
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  39158289 gagcaatgttatttgaacaaccatttattgtgacaacttattggacaac 39158241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 51255930 - 51255882
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  51255930 gagcaatgttatttgtacaaccatttattgtgacaacttgttggacaac 51255882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 18316121 - 18316073
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||| ||| || |||||||||||||||||||    
T  18316121 gagcaatgttatttgaacaaccatttcttatgacaacttgttggacaac 18316073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 384
Target Start/End: Original strand, 25318073 - 25318128
Alignment:
Q  331 tgagtatgagagagaaaattgtcgcaaaaattat--tgttcaaatatcatttctct 384  Q
    ||||||||||||||||||||||||||||| ||||  | ||||||||||||||||||    
T  25318073 tgagtatgagagagaaaattgtcgcaaaagttatcatattcaaatatcatttctct 25318128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 38519977 - 38519929
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    ||||||||||||||| | |||| ||||||||||||||||||||||||||    
T  38519977 gagcaatgttatttgtataaccatttattgtgacaacttgttggacaac 38519929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 21014180 - 21014143
Alignment:
Q  211 agcaatgttatttgaacaaccctttattgtgacaactt 248  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  21014180 agcaatgttatttgaacaaccttttattgtgacaactt 21014143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 327 - 364
Target Start/End: Complemental strand, 40348860 - 40348823
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  40348860 aatgtgagtatgagagagaaaattgtcacaaaaattat 40348823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 327 - 383
Target Start/End: Complemental strand, 48335621 - 48335564
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattat-tgttcaaatatcatttctc 383  Q
    ||||||| |||||||||||||||||| ||||||||| | ||||| |||||||||||||    
T  48335621 aatgtgaatatgagagagaaaattgttgcaaaaattgtatgttcgaatatcatttctc 48335564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 55266212 - 55266171
Alignment:
Q  207 aatgagcaatgttatttgaacaaccctttattgtgacaactt 248  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  55266212 aatgagcaatgttatttgaacaatcctttattgtgataactt 55266171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 382
Target Start/End: Complemental strand, 5386444 - 5386385
Alignment:
Q  322 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttct 382  Q
    |||| ||||||||||||||||||||| |||||  ||||||  |||||||||||||||||||    
T  5386444 agaataatgtgagtatgagagagaaagttgtc-aaaaaatggttgttcaaatatcatttct 5386385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 29227130 - 29227178
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||| |||  |||||||| ||||||||||||    
T  29227130 gagcaatgttatttgaacaacctttttatgtgacaatttgttggacaac 29227178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 382
Target Start/End: Complemental strand, 9096003 - 9095949
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttct 382  Q
    ||||||||||||||||||||||||||  ||||||| ||||| |||||| |||||||    
T  9096003 aatgtgagtatgagagagaaaattgt-acaaaaataattgtacaaataacatttct 9095949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 257
Target Start/End: Original strand, 22813609 - 22813656
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaa 257  Q
    |||||||||||||| ||||||  ||| |||||||||||||||||||||    
T  22813609 gagcaatgttatttaaacaactttttcttgtgacaacttgttggacaa 22813656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 39606033 - 39605969
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctttcattatt 393  Q
    ||||||||||||||||||||| ||||  |||||||  ||||||| ||||||||||||| | ||||||    
T  39606033 aatgtgagtatgagagagaaagttgt--caaaaatggttgttcatatatcatttctctattattatt 39605969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 43769778 - 43769720
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||||    
T  43769778 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctcttt 43769720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 28657445 - 28657502
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 385  Q
    ||||||||||||||||||||| ||||| | |||||   |||||||||||||||||||||    
T  28657445 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctctt 28657502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 37727059 - 37727117
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 385  Q
    |||||||||||||||||| ||||| ||  |||| | ||||| |||||||||||||||||    
T  37727059 aatgtgagtatgagagagcaaattatcaaaaaattgattgtacaaatatcatttctctt 37727117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 322 - 364
Target Start/End: Complemental strand, 39158177 - 39158135
Alignment:
Q  322 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    |||| ||||||||||||||||||||| ||||| ||||||||||    
T  39158177 agaataatgtgagtatgagagagaaagttgtcacaaaaattat 39158135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 49585061 - 49585023
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 365  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  49585061 aatgtgagtatgagagagaaagttgtcccaaaaattatt 49585023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 359
Target Start/End: Complemental strand, 56557802 - 56557768
Alignment:
Q  325 acaatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    ||||||||||||||||||||||||||||| |||||    
T  56557802 acaatgtgagtatgagagagaaaattgtcacaaaa 56557768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 364
Target Start/End: Original strand, 149489 - 149526
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  149489 aatgtgagtatgagagagaaagttgtcacaaaaattat 149526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 383
Target Start/End: Original strand, 1580288 - 1580342
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||||||||||||||||||||||||  || ||| | |||| |||||||||||||||    
T  1580288 aatgtgagtatgagagagaaaattgt--cacaaagtgttgtacaaatatcatttctc 1580342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 4106106 - 4106052
Alignment:
Q  329 tgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 385  Q
    ||||||||||||||||||||||||   |||||  ||||| |||||||||||||||||    
T  4106106 tgtgagtatgagagagaaaattgt--aaaaaaaaattgtacaaatatcatttctctt 4106052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 385
Target Start/End: Complemental strand, 4949572 - 4949516
Alignment:
Q  328 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 385  Q
    |||||||||||||||||||| ||||| |  |||| | |||||||||||||||||||||    
T  4949572 atgtgagtatgagagagaaagttgtcac-caaatgaatgttcaaatatcatttctctt 4949516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 364
Target Start/End: Complemental strand, 7627915 - 7627878
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    |||||||||||||||||||||||| || ||||||||||    
T  7627915 aatgtgagtatgagagagaaaattatcacaaaaattat 7627878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 364
Target Start/End: Original strand, 26206981 - 26207018
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  26206981 aatgtgaatatgagagagaaaattgttgcaaaaattat 26207018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 26600085 - 26600134
Alignment:
Q  209 tgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    ||||||||||||||||||||||  |||  |||||||| ||||||||||||    
T  26600085 tgagcaatgttatttgaacaacatttttatgtgacaatttgttggacaac 26600134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 384
Target Start/End: Complemental strand, 31657713 - 31657657
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 384  Q
    ||||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||    
T  31657713 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctct 31657657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 41262347 - 41262384
Alignment:
Q  325 acaatgtgagtatgagagagaaaattgtcgcaaaaatt 362  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  41262347 acaatgtgagtaagagagagaaaattgttgcaaaaatt 41262384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 383
Target Start/End: Original strand, 50608629 - 50608683
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||||||||||| ||||||| |||||  |||||| ||||||||||||| |||||||    
T  50608629 aatgtgagtatgaaagagaaagttgtc--aaaaataattgttcaaatataatttctc 50608683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 5386556 - 5386508
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||| ||||||||||||| ||| |||||||||||| || ||||||    
T  5386556 gagcaatgatatttgaacaaccatttcttgtgacaactttttagacaac 5386508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 14443382 - 14443334
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||| ||||||||||||| ||| |||||||||| | |||||||||    
T  14443382 gagcaatgatatttgaacaaccattttttgtgacaaccttttggacaac 14443334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 383
Target Start/End: Original strand, 24310526 - 24310581
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||||||||||||||||||| ||||  |||||||  |||| |||||||||||||||    
T  24310526 aatgtgagtatgagagagaaagttgt-acaaaaatggttgtacaaatatcatttctc 24310581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 359
Target Start/End: Complemental strand, 37297115 - 37297083
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    ||||||||||||||||||||||||||| |||||    
T  37297115 aatgtgagtatgagagagaaaattgtcacaaaa 37297083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 383
Target Start/End: Complemental strand, 37731981 - 37731926
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||||||||||||||||||| ||||  | ||||| ||||| |||||||||||||||    
T  37731981 aatgtgagtatgagagagaaagttgt-accaaaatgattgtacaaatatcatttctc 37731926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 322 - 362
Target Start/End: Complemental strand, 50050709 - 50050669
Alignment:
Q  322 agaacaatgtgagtatgagagagaaaattgtcgcaaaaatt 362  Q
    |||||||||| | ||||||||||||||||||| ||||||||    
T  50050709 agaacaatgtaaatatgagagagaaaattgtcacaaaaatt 50050669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 50506572 - 50506524
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||  ||| |||||||||| | |||||||||    
T  50506572 gagcaatgttatttgaacaactatttcttgtgacaaccttttggacaac 50506524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 54000878 - 54000834
Alignment:
Q  214 aatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||  |||||||||||||| | |||||||||    
T  54000878 aatgttatttgaacaactatttattgtgacaaccttttggacaac 54000834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 29526047 - 29525999
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  29526047 gagcaatgttatttgtacaaccatttattgtgacaacttgttggacaac 29525999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 325 - 383
Target Start/End: Complemental strand, 9753287 - 9753230
Alignment:
Q  325 acaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||||||||||||||||| ||||||||| | ||||| |||||||||||||||||||||    
T  9753287 acaatgtgagtatgagagataaaattgtcac-aaaatgattgttcaaatatcatttctc 9753230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 34307426 - 34307476
Alignment:
Q  208 atgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||| ||||| |||||||||||| |||||||||    
T  34307426 atgagcaatgttatttgaacaatcctttcttgtgacaacttattggacaac 34307476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 4494124 - 4494172
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||| ||| || |||||||||||||||||||    
T  4494124 gagcaatgttatttgaacaaccatttcttatgacaacttgttggacaac 4494172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 19149056 - 19148996
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctttcat 389  Q
    ||||||||||||||||||||| || |   |||||| |||||||||||||||||||||||||||    
T  19149056 aatgtgagtatgagagagaaagttata--aaaaatgattgttcaaatatcatttctctttcat 19148996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 382
Target Start/End: Original strand, 35377086 - 35377141
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttct 382  Q
    ||||||||| ||||||||||| ||||| ||||| || |||||||||||||||||||    
T  35377086 aatgtgagtgtgagagagaaagttgtcacaaaagttgttgttcaaatatcatttct 35377141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 50745615 - 50745557
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||||||||||||||||||| ||||  ||||||| ||||| ||||||||||||||||||    
T  50745615 aatgtgagtatgagagagaaagttgta-caaaaatgattgtacaaatatcatttctcttt 50745557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 364
Target Start/End: Complemental strand, 38671689 - 38671647
Alignment:
Q  322 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  38671689 agaacaatgtgagtacgagagagaaaattgtcacaaaaattat 38671647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 3281720 - 3281778
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||||||||| ||||||||| ||||| ||||| | | ||||||||||||||||||||||    
T  3281720 aatgtgagtataagagagaaagttgtcacaaaa-taaatgttcaaatatcatttctcttt 3281778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 248
Target Start/End: Original strand, 27168572 - 27168607
Alignment:
Q  213 caatgttatttgaacaaccctttattgtgacaactt 248  Q
    |||||||||||||||||||||||||| |||||||||    
T  27168572 caatgttatttgaacaaccctttattatgacaactt 27168607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 384
Target Start/End: Complemental strand, 47683858 - 47683800
Alignment:
Q  325 acaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 384  Q
    ||||||||||||||||||||||| ||||| | |||||  |||| ||||||||||||||||    
T  47683858 acaatgtgagtatgagagagaaagttgtcac-aaaatggttgtacaaatatcatttctct 47683800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 49361840 - 49361898
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||||||||||||||| ||| ||||  ||||||| ||||| ||||||||||||||||||    
T  49361840 aatgtgagtatgagagaaaaagttgta-caaaaatgattgtacaaatatcatttctcttt 49361898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 49761374 - 49761316
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||||    
T  49761374 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctcttt 49761316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 362
Target Start/End: Complemental strand, 10465009 - 10464975
Alignment:
Q  328 atgtgagtatgagagagaaaattgtcgcaaaaatt 362  Q
    |||||||||||||||||||||||||| ||||||||    
T  10465009 atgtgagtatgagagagaaaattgtcacaaaaatt 10464975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 29846896 - 29846953
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 385  Q
    ||||||||||||||||||||| ||||  |||||||  |||| |||||||||||||||||    
T  29846896 aatgtgagtatgagagagaaagttgt-acaaaaatggttgtacaaatatcatttctctt 29846953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 364
Target Start/End: Original strand, 3953479 - 3953516
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  3953479 aatgtgagtatgagagagaaagttgtcacaaaaattat 3953516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 364
Target Start/End: Original strand, 24095410 - 24095447
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  24095410 aatgtgagtatgagagagaaagttgtcacaaaaattat 24095447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 383
Target Start/End: Original strand, 24256780 - 24256830
Alignment:
Q  331 tgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||||||| ||||||| |||||  |||||| |||||||||||||||||||||    
T  24256780 tgagtatgatagagaaatttgtc--aaaaatgattgttcaaatatcatttctc 24256830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 384
Target Start/End: Complemental strand, 28700527 - 28700471
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 384  Q
    ||||||||||||||||| ||| |||||  ||||||  |||||||||||||||||||||    
T  28700527 aatgtgagtatgagagataaagttgtca-aaaaatggttgttcaaatatcatttctct 28700471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 384
Target Start/End: Complemental strand, 35368677 - 35368621
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 384  Q
    ||||||||||||||||||||| ||||  |||||||  |||| ||||||||||||||||    
T  35368677 aatgtgagtatgagagagaaagttgt-acaaaaatagttgtacaaatatcatttctct 35368621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 386
Target Start/End: Original strand, 38470597 - 38470626
Alignment:
Q  357 aaaattattgttcaaatatcatttctcttt 386  Q
    ||||||||||||||||||||||||||||||    
T  38470597 aaaattattgttcaaatatcatttctcttt 38470626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 39713927 - 39713972
Alignment:
Q  213 caatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    ||||||||||||||||||| ||| |||||| || ||||||||||||    
T  39713927 caatgttatttgaacaaccattttttgtgataatttgttggacaac 39713972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 364
Target Start/End: Complemental strand, 50314691 - 50314654
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  50314691 aatgtgagtatgagagagaaaattgtcgaaaaagttat 50314654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 359
Target Start/End: Original strand, 6178430 - 6178462
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    ||||||||||||||||||||||||||| |||||    
T  6178430 aatgtgagtatgagagagaaaattgtcacaaaa 6178462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 359
Target Start/End: Complemental strand, 8846558 - 8846526
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    ||||||||||||||||||||||||||| |||||    
T  8846558 aatgtgagtatgagagagaaaattgtcacaaaa 8846526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 383
Target Start/End: Complemental strand, 29057714 - 29057659
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||||||||||||||||||| ||||  |||||||  |||| |||||||||||||||    
T  29057714 aatgtgagtatgagagagaaagttgt-acaaaaatggttgtacaaatatcatttctc 29057659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 31104848 - 31104800
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||  ||| ||||||||| ||||| ||||||    
T  31104848 gagcaatgttatttgaacaactttttcttgtgacaatttgtttgacaac 31104800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 32145873 - 32145917
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttgga 254  Q
    |||||||||||||||||||||| ||||  | ||||||||||||||    
T  32145873 gagcaatgttatttgaacaaccatttacggggacaacttgttgga 32145917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 353
Target Start/End: Complemental strand, 33007432 - 33007400
Alignment:
Q  321 gagaacaatgtgagtatgagagagaaaattgtc 353  Q
    ||||| |||||||||||||||||||||||||||    
T  33007432 gagaataatgtgagtatgagagagaaaattgtc 33007400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 353
Target Start/End: Complemental strand, 39540307 - 39540275
Alignment:
Q  321 gagaacaatgtgagtatgagagagaaaattgtc 353  Q
    ||||| |||||||||||||||||||||||||||    
T  39540307 gagaataatgtgagtatgagagagaaaattgtc 39540275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 43169752 - 43169815
Alignment:
Q  321 gagaacaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 385  Q
    ||||| ||||||||||||||||| ||| ||||| | |||||  |||| |||||||||||||||||    
T  43169752 gagaataatgtgagtatgagagaaaaagttgtcac-aaaatggttgtacaaatatcatttctctt 43169815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 359
Target Start/End: Original strand, 44677488 - 44677520
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    |||||||||||||||||||||||||| ||||||    
T  44677488 aatgtgagtatgagagagaaaattgttgcaaaa 44677520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 359
Target Start/End: Original strand, 45711444 - 45711476
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    ||||||||||||||||||||||||||| |||||    
T  45711444 aatgtgagtatgagagagaaaattgtcacaaaa 45711476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 383
Target Start/End: Complemental strand, 47484346 - 47484290
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||||||||||||||| ||||||||   ||||||  |||| |||||||||||||||    
T  47484346 aatgtgagtatgagagaaaaaattgtacaaaaaatggttgtacaaatatcatttctc 47484290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 383
Target Start/End: Complemental strand, 48893409 - 48893354
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||||||||||||||| |||||||||  |||||| | |||| ||||||||||||||    
T  48893409 aatgtgagtatgagagaaaaaattgtc-aaaaaatgaatgtttaaatatcatttctc 48893354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 384
Target Start/End: Complemental strand, 50146542 - 50146487
Alignment:
Q  328 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 384  Q
    |||| ||||||||||||||||||||| | ||||| ||| | ||||||||||||||||    
T  50146542 atgtaagtatgagagagaaaattgtcac-aaaatgattatacaaatatcatttctct 50146487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 53681235 - 53681187
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||| ||||||||| ||| |||||||||| | |||||||||    
T  53681235 gagcaatgttatatgaacaaccattttttgtgacaaccttttggacaac 53681187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 210 - 257
Target Start/End: Original strand, 33451452 - 33451499
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaa 257  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  33451452 gagcaatgttatttgaacaaccctttcttgtgacaacttgttagacaa 33451499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 1068790 - 1068742
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||    
T  1068790 gagcaatgttatttgaacaacctttttatgtgacaacttgttggacaac 1068742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 384
Target Start/End: Complemental strand, 7010739 - 7010684
Alignment:
Q  328 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 384  Q
    ||||||||||||||||||||||||||  |||||| ||||| ||||||||||||||||    
T  7010739 atgtgagtatgagagagaaaattgtc-aaaaaatgattgtacaaatatcatttctct 7010684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 385
Target Start/End: Complemental strand, 9963752 - 9963694
Alignment:
Q  327 aatgtgagtatga-gagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 385  Q
    ||||||||||||| ||||||||||||||  |||||||||||| |||||||||||||||||    
T  9963752 aatgtgagtatgatgagagaaaattgtca-aaaaattattgtacaaatatcatttctctt 9963694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 209 - 248
Target Start/End: Complemental strand, 42652778 - 42652739
Alignment:
Q  209 tgagcaatgttatttgaacaaccctttattgtgacaactt 248  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  42652778 tgagcaatgttatttgaacaactctttattgtgacaactt 42652739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 40413348 - 40413412
Alignment:
Q  321 gagaacaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||| || |||||||||||||||||| ||||| | ||||| ||||| ||||||||||||||||||    
T  40413348 gagaataacgtgagtatgagagagaaagttgtcac-aaaataattgtacaaatatcatttctcttt 40413412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 383
Target Start/End: Complemental strand, 6243100 - 6243045
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||||||||||||||||||| ||||  ||||||| ||||| |||||||||||||||    
T  6243100 aatgtgagtatgagagagaaagttgt-acaaaaatgattgtacaaatatcatttctc 6243045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 15716863 - 15716911
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||  |||  |||||||||||||||||||||    
T  15716863 gagcaatgttatttgaacaacttttttatgtgacaacttgttggacaac 15716911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 33107754 - 33107802
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||| |||  |||||||| ||||||||||||    
T  33107754 gagcaatgttatttgaacaacctttttatgtgacaatttgttggacaac 33107802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 34435624 - 34435672
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||| |||  ||||||||||||||| |||||    
T  34435624 gagcaatgttatttgaacaacctttttatgtgacaacttgttgcacaac 34435672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 44091070 - 44091022
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||| |||  ||||||||||| |||||||||    
T  44091070 gagcaatgttatttgaacaaccttttcatgtgacaactttttggacaac 44091022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 14710898 - 14710956
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||||||||||||||||||| ||||| | ||||| ||||| |||||||||||| |||||    
T  14710898 aatgtgagtatgagagagaaagttgtcac-aaaatgattgtacaaatatcatttatcttt 14710956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 242
Target Start/End: Original strand, 36874001 - 36874032
Alignment:
Q  211 agcaatgttatttgaacaaccctttattgtga 242  Q
    ||||||||||||||||||||||||||||||||    
T  36874001 agcaatgttatttgaacaaccctttattgtga 36874032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 382
Target Start/End: Complemental strand, 39211108 - 39211054
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttct 382  Q
    ||||||||||||||||||||| |||||  ||||||  |||||||||||||||||||    
T  39211108 aatgtgagtatgagagagaaagttgtc-aaaaaatggttgttcaaatatcatttct 39211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 381
Target Start/End: Complemental strand, 17823520 - 17823469
Alignment:
Q  328 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttc 381  Q
    |||||||||||||||| |||||||||  ||||||  ||||||||||||||||||    
T  17823520 atgtgagtatgagagaaaaaattgtcataaaaat--ttgttcaaatatcatttc 17823469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 28756602 - 28756564
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 365  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  28756602 aatgtgagtatgagagataaaattgtcacaaaaattatt 28756564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 30439510 - 30439567
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 385  Q
    ||||||||||||||||||||| ||||| | |||||   |||||||||||||||||||||    
T  30439510 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctctt 30439567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 37392133 - 37392190
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 385  Q
    ||||||||||||||||||||| |||||  ||||||  |||| |||||||||||||||||    
T  37392133 aatgtgagtatgagagagaaagttgtc-aaaaaatggttgtacaaatatcatttctctt 37392190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 8645228 - 8645195
Alignment:
Q  331 tgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    ||||||||||||||||||||||| ||||||||||    
T  8645228 tgagtatgagagagaaaattgtcccaaaaattat 8645195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 11134769 - 11134720
Alignment:
Q  208 atgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaa 257  Q
    ||||||||||||||||||||||   ||| |||||| ||||||||||||||    
T  11134769 atgagcaatgttatttgaacaaatatttcttgtgataacttgttggacaa 11134720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 359
Target Start/End: Original strand, 34435736 - 34435773
Alignment:
Q  322 agaacaatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  34435736 agaacaatgtgtgtatgagagagaaaattgtcacaaaa 34435773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 388
Target Start/End: Original strand, 38939194 - 38939254
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctttca 388  Q
    ||||||||||||||||||||| ||||  |||||||  ||||  |||||||||||||||||||    
T  38939194 aatgtgagtatgagagagaaagttgt-acaaaaatagttgtagaaatatcatttctctttca 38939254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 364
Target Start/End: Complemental strand, 41521035 - 41520998
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  41521035 aatgtgagtatgagagagaaaattgttgcaaaagttat 41520998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 359
Target Start/End: Original strand, 9549203 - 9549235
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    ||||||||||||||||||||||||||| |||||    
T  9549203 aatgtgagtatgagagagaaaattgtcacaaaa 9549235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 10692466 - 10692434
Alignment:
Q  356 aaaaattattgttcaaatatcatttctctttca 388  Q
    |||||| ||||||||||||||||||||||||||    
T  10692466 aaaaatgattgttcaaatatcatttctctttca 10692434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 359
Target Start/End: Original strand, 16327156 - 16327188
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    ||||||||||||||||||||| |||||||||||    
T  16327156 aatgtgagtatgagagagaaagttgtcgcaaaa 16327188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 26027080 - 26027032
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    ||||||||||||||||||| |  ||| ||||||||||||||||| ||||    
T  26027080 gagcaatgttatttgaacagctatttcttgtgacaacttgttggccaac 26027032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 359
Target Start/End: Complemental strand, 27776219 - 27776187
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    ||||||||||||| |||||||||||||||||||    
T  27776219 aatgtgagtatgaaagagaaaattgtcgcaaaa 27776187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 28772013 - 28772061
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||| ||||||||||||| ||| |||||||||| | |||||||||    
T  28772013 gagcaatgatatttgaacaaccatttcttgtgacaaccttttggacaac 28772061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 359
Target Start/End: Original strand, 33589234 - 33589266
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    |||||||||||||||||||||||||| ||||||    
T  33589234 aatgtgagtatgagagagaaaattgttgcaaaa 33589266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 359
Target Start/End: Complemental strand, 34018875 - 34018843
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    |||||||||||||||||||||||||| ||||||    
T  34018875 aatgtgagtatgagagagaaaattgttgcaaaa 34018843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 322 - 386
Target Start/End: Original strand, 36874110 - 36874173
Alignment:
Q  322 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||||||||||  |||  | |||||||||||  ||||||| |||||||||||||||||||||||    
T  36874110 agaacaatgtgaacatgttaaagaaaattgtca-aaaaattgttgttcaaatatcatttctcttt 36874173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 383
Target Start/End: Complemental strand, 37471709 - 37471654
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    |||||||||| |||||||||| ||||  ||||||| ||||| |||||||||||||||    
T  37471709 aatgtgagtacgagagagaaagttgta-caaaaatgattgtacaaatatcatttctc 37471654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 383
Target Start/End: Original strand, 38174238 - 38174294
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||||||||||||||||||| |||||  ||| ||  |||| |||||||||||||||    
T  38174238 aatgtgagtatgagagagaaagttgtctaaaagatagttgtacaaatatcatttctc 38174294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 322 - 358
Target Start/End: Complemental strand, 44090958 - 44090922
Alignment:
Q  322 agaacaatgtgagtatgagagagaaaattgtcgcaaa 358  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  44090958 agaacaatgtgtgtatgagagagaaaattgtcacaaa 44090922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 26480977 - 26481015
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaactt 248  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26480977 gagcaatgttatttgaacaaccctttattgtgacaactt 26481015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 44239222 - 44239172
Alignment:
Q  208 atgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||||| ||||||||||||| || |||||||||    
T  44239222 atgagcaatgttatttgaacaaccatttattgtgacaattttttggacaac 44239172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 2427885 - 2427934
Alignment:
Q  209 tgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  2427885 tgagcaatgttatttgaacaaccattttttgtgacaatttgttggacaac 2427934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 205 - 258
Target Start/End: Complemental strand, 11965982 - 11965929
Alignment:
Q  205 ccaatgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||| |||||||||||||||||||||| |||  |||||||||||||||||||||    
T  11965982 ccaaagagcaatgttatttgaacaacctttttatgtgacaacttgttggacaac 11965929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 42607536 - 42607592
Alignment:
Q  328 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 385  Q
    |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||    
T  42607536 atgtgagtatgagagagaaaattgtcac-aaaataattgtacaaatatcatttctctt 42607592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 6049349 - 6049408
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||||||||||||||||||| || || |||||||  ||| |||||||||||||||||||    
T  6049349 aatgtgagtatgagagagaaagttatcacaaaaatggttgatcaaatatcatttctcttt 6049408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 10711791 - 10711733
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||||||||||||||||||||||||| | |||||   ||||||||||||||||||||||    
T  10711791 aatgtgagtatgagagagaaaattgtcac-aaaatagatgttcaaatatcatttctcttt 10711733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 37731086 - 37731135
Alignment:
Q  209 tgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    ||||||||||||||||||||||| |||  ||||||||||||||| |||||    
T  37731086 tgagcaatgttatttgaacaacctttttatgtgacaacttgttgcacaac 37731135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 327 - 383
Target Start/End: Original strand, 37737982 - 37738036
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||||||||||||||||||| ||||||  |||||  ||||||||||||||||||||    
T  37737982 aatgtgagtatgagagagaaagttgtcg--aaaatggttgttcaaatatcatttctc 37738036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 14877169 - 14877125
Alignment:
Q  214 aatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||||    
T  14877169 aatgttatttgaacaaccatttcttgtgacaacttgttagacaac 14877125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 31578618 - 31578570
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||| ||||||||||| | ||| ||||||||||||||||||||||    
T  31578618 gagcaatgatatttgaacaatcatttcttgtgacaacttgttggacaac 31578570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 37316702 - 37316750
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||| |||  | |||||||||||||||||||    
T  37316702 gagcaatgttatttgaacaacctttttctatgacaacttgttggacaac 37316750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 13266029 - 13265975
Alignment:
Q  330 gtgagtatgagagagaaaattgtcgcaaaaat--tattgttcaaatatcatttct 382  Q
    ||||||||||||||||||||||| ||||||||  | |||| ||||||||||||||    
T  13266029 gtgagtatgagagagaaaattgttgcaaaaattgtgttgtacaaatatcatttct 13265975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 17569749 - 17569780
Alignment:
Q  356 aaaaattattgttcaaatatcatttctctttc 387  Q
    ||||||||||||||||||||||||||||||||    
T  17569749 aaaaattattgttcaaatatcatttctctttc 17569780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 365
Target Start/End: Complemental strand, 19916727 - 19916684
Alignment:
Q  322 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattatt 365  Q
    ||||||||||| |||||||||||||| ||||| |||||||||||    
T  19916727 agaacaatgtgtgtatgagagagaaagttgtcacaaaaattatt 19916684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 361
Target Start/End: Complemental strand, 37003682 - 37003643
Alignment:
Q  322 agaacaatgtgagtatgagagagaaaattgtcgcaaaaat 361  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  37003682 agaacaatgtgagtatgagagagaaagttgtcacaaaaat 37003643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 6646889 - 6646832
Alignment:
Q  328 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    |||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||||    
T  6646889 atgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctcttt 6646832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 21738620 - 21738658
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 365  Q
    |||||||||||||||||||||||| || |||||||||||    
T  21738620 aatgtgagtatgagagagaaaattatcacaaaaattatt 21738658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 40210072 - 40210110
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 365  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  40210072 aatgtgagtatgagagagaaagttgtcacaaaaattatt 40210110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 384
Target Start/End: Original strand, 22296134 - 22296190
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 384  Q
    ||||||||||| ||||||||||||||  |||||||  |||| ||||||||||||||||    
T  22296134 aatgtgagtatcagagagaaaattgt-acaaaaatggttgtacaaatatcatttctct 22296190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 384
Target Start/End: Original strand, 22353180 - 22353236
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 384  Q
    ||||||||||||||| ||||| ||||| | ||||| ||||| ||||||||||||||||    
T  22353180 aatgtgagtatgagaaagaaagttgtcac-aaaatgattgtacaaatatcatttctct 22353236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 359
Target Start/End: Original strand, 37731199 - 37731236
Alignment:
Q  322 agaacaatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  37731199 agaacaatgtgtgtatgagagagaaaattgtcacaaaa 37731236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 364
Target Start/End: Complemental strand, 433916 - 433880
Alignment:
Q  328 atgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    |||||||||||||||||||| |||| |||||||||||    
T  433916 atgtgagtatgagagagaaagttgttgcaaaaattat 433880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 4263869 - 4263926
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||||||||||| ||||||| |||||  ||||| | |||| ||||||||||||||||||    
T  4263869 aatgtgagtatgaaagagaaagttgtc--aaaaaatgttgtacaaatatcatttctcttt 4263926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 359
Target Start/End: Original strand, 35589391 - 35589423
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    |||||||||||||||||||||||||| ||||||    
T  35589391 aatgtgagtatgagagagaaaattgttgcaaaa 35589423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 36587358 - 36587406
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||| ||| || ||||||| | |||||||||    
T  36587358 gagcaatgttatttgaacaaccatttcttctgacaaccttttggacaac 36587406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 359
Target Start/End: Complemental strand, 41195650 - 41195618
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    ||||||||||||||||||||||||||| |||||    
T  41195650 aatgtgagtatgagagagaaaattgtcacaaaa 41195618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 4213256 - 4213218
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaactt 248  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4213256 gagcaatgttatttgaacaaccctttattgtgacaactt 4213218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 7918953 - 7918997
Alignment:
Q  214 aatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||    
T  7918953 aatgttatttgaacaaccctttcttgtgacaacttgttagacaac 7918997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 383
Target Start/End: Original strand, 47398456 - 47398511
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    |||||||||||||||||||||||||||  |||||| | |||||||||||||||||||    
T  47398456 aatgtgagtatgagagagaaaattgtc-aaaaaatgaatgttcaaatatcatttctc 47398511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 47642494 - 47642542
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  47642494 gagcaatgttatttgaacaaccattttttgggacaacttgttggacaac 47642542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 48983555 - 48983603
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    ||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  48983555 gagcaatgttattggtacaaccatttattgtgacaacttgttggacaac 48983603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 207 - 258
Target Start/End: Original strand, 38878785 - 38878836
Alignment:
Q  207 aatgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    ||||||||||||||||||||||||  |||  |||||||||||||||||||||    
T  38878785 aatgagcaatgttatttgaacaacatttttatgtgacaacttgttggacaac 38878836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 50797845 - 50797788
Alignment:
Q  328 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    |||||||||||||||||||| ||||| | ||||| ||||| ||||||||||||||||||    
T  50797845 atgtgagtatgagagagaaagttgtcac-aaaatgattgtacaaatatcatttctcttt 50797788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 364
Target Start/End: Complemental strand, 8846039 - 8846003
Alignment:
Q  328 atgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    |||||||||||||||||||||||||| ||||||||||    
T  8846039 atgtgagtatgagagagaaaattgtcacaaaaattat 8846003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 383
Target Start/End: Complemental strand, 18336213 - 18336158
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||||||||||||||||||| ||||| | ||||| | |||||||||||||||||||    
T  18336213 aatgtgagtatgagagagaaagttgtcac-aaaatgaatgttcaaatatcatttctc 18336158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 27742793 - 27742745
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||| |||  ||| |||||||||||||||||    
T  27742793 gagcaatgttatttgaacaacctttttatgtaacaacttgttggacaac 27742745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 40439727 - 40439775
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||| |||  |||||||| ||||||||||||    
T  40439727 gagcaatgttatttgaacaacctttttatgtgacaatttgttggacaac 40439775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 42468776 - 42468728
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||| ||||||||||||| ||| ||||||||| ||||||||||||    
T  42468776 gagcaatgatatttgaacaaccatttcttgtgacaatttgttggacaac 42468728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 383
Target Start/End: Original strand, 51718631 - 51718687
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||||||||||||||||||| ||||   ||||||  ||||||||||||||||||||    
T  51718631 aatgtgagtatgagagagaaagttgtgaaaaaaatggttgttcaaatatcatttctc 51718687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 8200142 - 8200084
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||||    
T  8200142 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctcttt 8200084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 11121547 - 11121489
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||||||||||||||||||| ||||  ||||| || |||| ||||||||||||||||||    
T  11121547 aatgtgagtatgagagagaaagttgt-acaaaagttgttgtacaaatatcatttctcttt 11121489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 38303692 - 38303751
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    |||| |||||||||||||||| |||| | |||| ||  ||||||||||||||||||||||    
T  38303692 aatgcgagtatgagagagaaagttgttgtaaaagttgatgttcaaatatcatttctcttt 38303751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 40596059 - 40596117
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||||||||||||||||||| ||||| | |||||  |||| ||||||||||||||||||    
T  40596059 aatgtgagtatgagagagaaagttgtcac-aaaatggttgtacaaatatcatttctcttt 40596117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 48325783 - 48325841
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    ||||||||||||||| ||||||||||| | |||||  |||| ||||||||||||||||||    
T  48325783 aatgtgagtatgagatagaaaattgtcac-aaaatggttgtacaaatatcatttctcttt 48325841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 386
Target Start/End: Original strand, 611641 - 611698
Alignment:
Q  328 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 386  Q
    |||||| | |||||||||||||| || ||||| | ||||||||||||||||||||||||    
T  611641 atgtgaatttgagagagaaaattatcccaaaa-tgattgttcaaatatcatttctcttt 611698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 322 - 364
Target Start/End: Complemental strand, 4213144 - 4213102
Alignment:
Q  322 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    |||||||||||||||||||||||||| ||||| ||||| ||||    
T  4213144 agaacaatgtgagtatgagagagaaagttgtcacaaaagttat 4213102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 4857982 - 4857921
Alignment:
Q  322 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 384  Q
    ||||||||||| | |||||||||||| |||||  |||| | ||||||||||||||||||||||    
T  4857982 agaacaatgtgtgcatgagagagaaagttgtca-aaaagtgattgttcaaatatcatttctct 4857921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 33358163 - 33358220
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 385  Q
    ||||||||||||||||||||| ||||| | |||||   |||||||||||||||||||||    
T  33358163 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctctt 33358220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 321 - 383
Target Start/End: Complemental strand, 37690490 - 37690429
Alignment:
Q  321 gagaacaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||| |||||||||||||||||||||||||||   ||| | ||||| |||||||||||||||    
T  37690490 gagaataatgtgagtatgagagagaaaattgtc-ataaagtgattgtacaaatatcatttctc 37690429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 48103398 - 48103453
Alignment:
Q  331 tgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctttca 388  Q
    ||||||||||||||||| ||||| |||| | |  ||||||||||||||||||||||||    
T  48103398 tgagtatgagagagaaagttgtcacaaatagt--tgttcaaatatcatttctctttca 48103453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 52437561 - 52437523
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 365  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  52437561 aatgtgagtatgagagagaaagttgtcacaaaaattatt 52437523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 364
Target Start/End: Original strand, 5771752 - 5771789
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  5771752 aatgtgagtatgagagagaaagttgtcacaaaaattat 5771789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 364
Target Start/End: Original strand, 40328745 - 40328782
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    |||||||||||||||||||||||| || ||||||||||    
T  40328745 aatgtgagtatgagagagaaaattatcacaaaaattat 40328782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 365
Target Start/End: Complemental strand, 46281502 - 46281465
Alignment:
Q  328 atgtgagtatgagagagaaaattgtcgcaaaaattatt 365  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  46281502 atgtgagtatgagagagaaagttgtcacaaaaattatt 46281465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 384
Target Start/End: Original strand, 48220148 - 48220204
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 384  Q
    ||||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||    
T  48220148 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctct 48220204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 48859008 - 48858959
Alignment:
Q  209 tgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    ||||||||||||| ||||||||| ||| |||||||||| | |||||||||    
T  48859008 tgagcaatgttatatgaacaaccatttcttgtgacaaccttttggacaac 48858959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 50824804 - 50824771
Alignment:
Q  331 tgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    ||||||||||||||||||||||| ||||||||||    
T  50824804 tgagtatgagagagaaaattgtcacaaaaattat 50824771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 383
Target Start/End: Original strand, 16836120 - 16836175
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||||||||||||||| ||| ||||| | ||||| ||||| |||||||||||||||    
T  16836120 aatgtgagtatgagagaaaaagttgtcac-aaaatgattgtacaaatatcatttctc 16836175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 359
Target Start/End: Complemental strand, 29586060 - 29586028
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    |||||||||||||||||||||||||| ||||||    
T  29586060 aatgtgagtatgagagagaaaattgttgcaaaa 29586028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 383
Target Start/End: Complemental strand, 30196780 - 30196724
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||||||||||||||||||| |||||  |||| | |||||  ||||||||||||||    
T  30196780 aatgtgagtatgagagagaaagttgtcaaaaaattgattgtagaaatatcatttctc 30196724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 353
Target Start/End: Complemental strand, 37515988 - 37515956
Alignment:
Q  321 gagaacaatgtgagtatgagagagaaaattgtc 353  Q
    ||||| |||||||||||||||||||||||||||    
T  37515988 gagaataatgtgagtatgagagagaaaattgtc 37515956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 383
Target Start/End: Original strand, 41507199 - 41507254
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||||||||||||||||||| ||||| | |||||  |||| |||||||||||||||    
T  41507199 aatgtgagtatgagagagaaagttgtcac-aaaatggttgtacaaatatcatttctc 41507254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 359
Target Start/End: Original strand, 47215733 - 47215765
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    ||||||||||||||||||||||||||| |||||    
T  47215733 aatgtgagtatgagagagaaaattgtcacaaaa 47215765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 17182284 - 17182244
Alignment:
Q  208 atgagcaatgttatttgaacaaccctttattgtgacaactt 248  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  17182284 atgagcaatgttatttgaacaaccctttattatgacaactt 17182244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 1287097 - 1287059
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaactt 248  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  1287097 gagcaatgttatttgaacaatcctttattgtgacaactt 1287059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 33712504 - 33712456
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||| |||  ||| |||||||||||||||||    
T  33712504 gagcaatgttatttgaacaacctttttatgtaacaacttgttggacaac 33712456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 362
Target Start/End: Original strand, 5570338 - 5570373
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaatt 362  Q
    ||||||||||||||||||||||||||| ||||||||    
T  5570338 aatgtgagtatgagagagaaaattgtcacaaaaatt 5570373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 257
Target Start/End: Original strand, 5739651 - 5739698
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaa 257  Q
    ||||||||||||||||||| || ||| || ||||||||||||||||||    
T  5739651 gagcaatgttatttgaacatccatttcttatgacaacttgttggacaa 5739698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 8645494 - 8645444
Alignment:
Q  208 atgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||| ||||||||||||| ||| |||||||||| | |||||||||    
T  8645494 atgagcaatgatatttgaacaaccatttcttgtgacaaccttttggacaac 8645444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 359
Target Start/End: Original strand, 34442065 - 34442099
Alignment:
Q  325 acaatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    ||||||||||||||||||||||||||||| |||||    
T  34442065 acaatgtgagtatgagagagaaaattgtcacaaaa 34442099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 18064980 - 18065025
Alignment:
Q  213 caatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    ||||||||||||||||||  |||  |||||||||||||||||||||    
T  18064980 caatgttatttgaacaacttttttatgtgacaacttgttggacaac 18065025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 383
Target Start/End: Complemental strand, 2163757 - 2163702
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||| ||||||||||||||||||||| | ||| | ||||| |||||||||||||||    
T  2163757 aatgtaagtatgagagagaaaattgtcac-aaattgattgtacaaatatcatttctc 2163702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 383
Target Start/End: Complemental strand, 2175390 - 2175335
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||| ||||||||||||||||||||| | ||| | ||||| |||||||||||||||    
T  2175390 aatgtaagtatgagagagaaaattgtcac-aaattgattgtacaaatatcatttctc 2175335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 359
Target Start/End: Original strand, 2777320 - 2777352
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    |||||||||||||||||||||||||| ||||||    
T  2777320 aatgtgagtatgagagagaaaattgttgcaaaa 2777352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 359
Target Start/End: Original strand, 11547533 - 11547565
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaa 359  Q
    |||||||||||||||||||||||||| ||||||    
T  11547533 aatgtgagtatgagagagaaaattgttgcaaaa 11547565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 364
Target Start/End: Complemental strand, 17182169 - 17182129
Alignment:
Q  324 aacaatgtgagtatgagagagaaaattgtcgcaaaaattat 364  Q
    ||||| |||| ||||||||||||||||||| ||||||||||    
T  17182169 aacaacgtgaatatgagagagaaaattgtcacaaaaattat 17182129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 28630165 - 28630129
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaatta 363  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  28630165 aatgtgagtatgagagagaaagttgtcacaaaaatta 28630129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 383
Target Start/End: Original strand, 32135436 - 32135491
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||||||||||| ||||||| ||||  ||||||| ||||| |||||||||||||||    
T  32135436 aatgtgagtatgatagagaaagttgta-caaaaatgattgtacaaatatcatttctc 32135491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 383
Target Start/End: Complemental strand, 32644678 - 32644623
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||||||||||||||||||| |||||  ||||||  |||| |||||||||||||||    
T  32644678 aatgtgagtatgagagagaaagttgtc-aaaaaatagttgtacaaatatcatttctc 32644623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 327 - 383
Target Start/End: Complemental strand, 23143 - 23086
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattat-tgttcaaatatcatttctc 383  Q
    ||||||| |||||||||||||||||| ||||||||| | ||||| |||||||||||||    
T  23143 aatgtgaatatgagagagaaaattgttgcaaaaattgtatgttcgaatatcatttctc 23086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 8657 - 8608
Alignment:
Q  209 tgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    ||||||||||||||||||||||  ||| ||||||||||||||| ||||||    
T  8657 tgagcaatgttatttgaacaactatttcttgtgacaacttgttagacaac 8608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 8840 - 8888
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||||||||||| |||  ||||||||||| |||||||||    
T  8840 gagcaatgttatttgaacaaccttttcatgtgacaactttttggacaac 8888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 322 - 358
Target Start/End: Original strand, 8952 - 8988
Alignment:
Q  322 agaacaatgtgagtatgagagagaaaattgtcgcaaa 358  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  8952 agaacaatgtgtgtatgagagagaaaattgtcacaaa 8988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 385
Target Start/End: Complemental strand, 1711 - 1656
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 385  Q
    |||| |||||||||||||||||||||| |||||    ||||||||||||||||||||||    
T  1711 aatgagagtatgagagagaaaattgtcacaaaa---gttgttcaaatatcatttctctt 1656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 13444 - 13492
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||| |||||| |||| |||||||||||| |||||||||    
T  13444 gagcaatgttatttaaacaactcttttttgtgacaacttattggacaac 13492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 59400 - 59352
Alignment:
Q  210 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 258  Q
    |||||||||||||| |||||| |||| |||||||||||| |||||||||    
T  59400 gagcaatgttatttaaacaactcttttttgtgacaacttattggacaac 59352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 101790 - 101830
Alignment:
Q  212 gcaatgttatttgaacaaccctttattgtgacaacttgttg 252  Q
    ||||||||||||| |||||||||| ||||||||||||||||    
T  101790 gcaatgttatttgcacaaccctttcttgtgacaacttgttg 101830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 31605 - 31662
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 385  Q
    ||||||||||||||||||||| |||||  ||||||  |||| |||||||||||||||||    
T  31605 aatgtgagtatgagagagaaagttgtc-aaaaaatggttgtacaaatatcatttctctt 31662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 383
Target Start/End: Original strand, 18652 - 18707
Alignment:
Q  327 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 383  Q
    ||||| ||||||||||||||||||||| | ||| | ||||| |||||||||||||||    
T  18652 aatgtaagtatgagagagaaaattgtcac-aaattgattgtacaaatatcatttctc 18707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University