View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6170_high_6 (Length: 437)
Name: NF6170_high_6
Description: NF6170
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6170_high_6 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 399; Significance: 0; HSPs: 27)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 7 - 425
Target Start/End: Complemental strand, 8590887 - 8590469
Alignment:
| Q |
7 |
catatggccttcaaaagagagaaagtaacatcggaaaacgaaatgtgttcatctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaa |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
8590887 |
catatggccttcaaaagagagaaagtaacatcggaaaacgaaatgtgttcatctttgatcttggtggtggcacttttgatgtgtctcttctcacactcaa |
8590788 |
T |
|
| Q |
107 |
aggtgatagctttgatgtaaaagccacttccggagatacccacctaggaggagaggactttgataacagaatggttcaccatttggtgaaggagtttagg |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8590787 |
aggtgatagctttgatgtaaaagccacttccggagatacccacctaggaggagaggactttgataacagaatggttcaccatttggtgaaggagtttagg |
8590688 |
T |
|
| Q |
207 |
aggaagaataaagtggattttagtgggaacgcaagggctcttaggaggttgagaacagcttgtgagagggctaaaaggacactgtcatatgatactgagg |
306 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8590687 |
aggaagaataaagtggatttaagtgggaacgcaagggctcttaggaggttgaaaacagcttgtgagagggctaaaaggacactgtcatatgatactgagg |
8590588 |
T |
|
| Q |
307 |
caacaatcgacatagatgctatatatgagggagttgacttccatttattagtcactcgggccaagtttgaacaacttaacatggatctctttgaaaagtg |
406 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
8590587 |
caacaatcggcatagatgctatatatgagggagttgacttccatttattagtcactcgggccaagtttgaacaacttaacagggatctctttgaaaagtg |
8590488 |
T |
|
| Q |
407 |
tttggagattgtcaagaat |
425 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
8590487 |
tttggagattgtcaagaat |
8590469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 7 - 423
Target Start/End: Original strand, 7877652 - 7878068
Alignment:
| Q |
7 |
catatggccttcaaaagagagaaagtaacatcggaaaacgaaatgtgttcatctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaa |
106 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| | || |
|
|
| T |
7877652 |
catatggccttcaaaagagaataaataacatcggaaaacgaaatgtgttcatcattgatcttggtggtggcactttcgatgtgtctcttctcacactaaa |
7877751 |
T |
|
| Q |
107 |
aggtgatagctttgatgtaaaagccacttccggagatacccacctaggaggagaggactttgataacagaatggttcaccatttggtgaaggagtttagg |
206 |
Q |
| |
|
|| ||||||||||||||||| ||| ||| |||||||||| |||||||| |||||||||||||||||||||||| | ||||||| |||| |||||||| | |
|
|
| T |
7877752 |
agatgatagctttgatgtaatagctactgccggagatactcacctaggtggagaggactttgataacagaatgttgaaccatttagtgatggagtttaag |
7877851 |
T |
|
| Q |
207 |
aggaagaataaagtggattttagtgggaacgcaagggctcttaggaggttgagaacagcttgtgagagggctaaaaggacactgtcatatgatactgagg |
306 |
Q |
| |
|
||||||||||||||||| || |||| ||| | ||||| ||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
7877852 |
aggaagaataaagtggacattggtggaaacccgagggcccttaggaggttgagaactgcatgtgagagggctaaaaggacactgtcatttgatactgaga |
7877951 |
T |
|
| Q |
307 |
caacaatcgacatagatgctatatatgagggagttgacttccatttattagtcactcgggccaagtttgaacaacttaacatggatctctttgaaaagtg |
406 |
Q |
| |
|
| ||||| ||||||||||||||| | || ||| |||||||| || | ||| | | ||||||||||||||| ||||| || |||||||| |||||||| || |
|
|
| T |
7877952 |
ctacaattgacatagatgctatacacgacggaattgacttcaatatgttattaagtcgggccaagtttgagcaactcaatatggatctttttgaaaattg |
7878051 |
T |
|
| Q |
407 |
tttggagattgtcaaga |
423 |
Q |
| |
|
||||| ||||||||||| |
|
|
| T |
7878052 |
tttggcgattgtcaaga |
7878068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 39 - 418
Target Start/End: Original strand, 29577623 - 29578002
Alignment:
| Q |
39 |
ggaaaacgaaatgtgttcatctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccg |
138 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| | || | |||||| ||||| ||||| |||||| | | |
|
|
| T |
29577623 |
ggaaagcgaaatgtattcatctttgatcttggtggtggcacctttgatgtgtctcttctcacacttaaggatgatagttttgaagtaaaggccactgctg |
29577722 |
T |
|
| Q |
139 |
gagatacccacctaggaggagaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgc |
238 |
Q |
| |
|
| ||||| |||||||||||||||||||| ||||| | |||||| ||| || ||||| ||||| | ||||||||| || ||||| ||||| |||| | |
|
|
| T |
29577723 |
gtgatactcacctaggaggagaggacttcgataataaaatggtgagccactttgtgaatgagttgaagaggaagaacaatgtggacattagtttgaaccc |
29577822 |
T |
|
| Q |
239 |
aagggctcttaggaggttgagaacagcttgtgagagggctaaaaggacactgtcatatgatactgaggcaacaatcgacatagatgctatatatgaggga |
338 |
Q |
| |
|
|| ||| | |||| | ||||||| |||||||||||||| || ||| |||| |||||||| | |||||| ||||| |||||||||||||||| | |||| |
|
|
| T |
29577823 |
aaaagctttaaggaagctgagaactgcttgtgagagggcaaagagggcactttcatatgacattgaggccacaattgacatagatgctatatgtcagggt |
29577922 |
T |
|
| Q |
339 |
gttgacttccatttattagtcactcgggccaagtttgaacaacttaacatggatctctttgaaaagtgtttggagattgt |
418 |
Q |
| |
|
|||||||| | || | | |||||||| || ||||| | ||| |||||||| ||||||||||| ||| |||||||||| |
|
|
| T |
29577923 |
attgacttctgctcatcaattactcgggcgaaatttgagcgactcaacatggacctctttgaaaaatgtatggagattgt |
29578002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 39 - 418
Target Start/End: Original strand, 29581792 - 29582171
Alignment:
| Q |
39 |
ggaaaacgaaatgtgttcatctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccg |
138 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||| ||||| || || |||||| | | |
|
|
| T |
29581792 |
ggaaaacgaaatatattcatctttgatcttggtggtggcacttttgatgtgtctcttctcacactcaaggatgataagtttgaagtgaaggccactgctg |
29581891 |
T |
|
| Q |
139 |
gagatacccacctaggaggagaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgc |
238 |
Q |
| |
|
| ||||| ||||||||||||||||||||||||||| ||||||| | | || | ||| ||||| | ||||||||| || |||| ||||||||||| | |
|
|
| T |
29581892 |
gcgatactcacctaggaggagaggactttgataaccgaatggtgaattactttgcgaatgagttgaagaggaagaacaatttggacattagtgggaaccc |
29581991 |
T |
|
| Q |
239 |
aagggctcttaggaggttgagaacagcttgtgagagggctaaaaggacactgtcatatgatactgaggcaacaatcgacatagatgctatatatgaggga |
338 |
Q |
| |
|
|| ||| | |||| | |||||||||||||||||||||| || |||||||| |||| ||| | |||| | ||||| ||| ||||||| || | | | || |
|
|
| T |
29581992 |
aaaagctttaaggaagctgagaacagcttgtgagagggcaaagaggacactttcatttgacattgagaccacaattgacgtagatgccatttgtcaaggt |
29582091 |
T |
|
| Q |
339 |
gttgacttccatttattagtcactcgggccaagtttgaacaacttaacatggatctctttgaaaagtgtttggagattgt |
418 |
Q |
| |
|
|||| ||| | | ||| ||||||||||||||||| ||| | ||||| || ||||||||||| ||| |||||||||| |
|
|
| T |
29582092 |
attgatttctgctcaccagttactcgggccaagtttgagcaaatcaacatcgacctctttgaaaaatgtatggagattgt |
29582171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 57 - 414
Target Start/End: Complemental strand, 8610116 - 8609759
Alignment:
| Q |
57 |
atctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagcttt-gatgtaaaagccacttccggagatacccacctagga |
155 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||| |||||||| | ||| || ||||| ||||| || || ||| | |||||||| ||||| ||| |
|
|
| T |
8610116 |
atctttgatcttggtggtgggactttcgatgtgtctgttctcacaattaaaaacaat-gctttcgatgtcaaggctactgctggagatactcaccttgga |
8610018 |
T |
|
| Q |
156 |
ggagaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctcttaggaggt |
255 |
Q |
| |
|
||||||||||||||| ||||||||||| | || || ||||||||||| | |||||| || | ||| | ||||||||| | |||||||||||||||| |
|
|
| T |
8610017 |
ggagaggactttgatcacagaatggttaatcactttgtgaaggagttcaaaaggaagcattcaaaagatatcagtgggaactcgagggctcttaggaggt |
8609918 |
T |
|
| Q |
256 |
tgagaacagcttgtgagagggctaaaaggacactgtcatatgatactgaggcaacaatcgacatagatgctatatatgagggagttgacttccatttatt |
355 |
Q |
| |
|
|||| || |||||||||||||| || |||||||| |||| ||| || ||||| ||||| || || |||||||||| |||||| |||| || || || |
|
|
| T |
8609917 |
tgaggactgcttgtgagagggcaaagaggacactttcatttgacacggaggccacaattgatattgatgctatatctgagggtattgatttttgttcatc |
8609818 |
T |
|
| Q |
356 |
agtcactcgggccaagtttgaacaacttaacatggatctctttgaaaagtgtttggaga |
414 |
Q |
| |
|
| ||||||| || |||||||| |||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
8609817 |
aatcactcgtgcgaagtttgagcaacttaacatggacctctttgaaaagtgtatggaga |
8609759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 54 - 414
Target Start/End: Original strand, 8382842 - 8383202
Alignment:
| Q |
54 |
ttcatctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctag |
153 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| |||||| | || | || ||||| ||| || |||||| ||||||| || || |||| |
|
|
| T |
8382842 |
ttcatctttgatcttggtggtggaacttttgatgtgtctctcctcacaattaagaataatgtctttgttgtgaaggccactgccggagacactcatctag |
8382941 |
T |
|
| Q |
154 |
gaggagaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctcttaggag |
253 |
Q |
| |
|
|||| || ||||| ||||||||||| || | | || || | ||||| | ||||||| |||| ||| ||||||||||| ||| ||||||||| || |
|
|
| T |
8382942 |
gaggtgaagacttagataacagaatcgtgaagtactttgttgacgagttcaagaggaagcataataaggacattagtgggaacccaaaggctcttagaag |
8383041 |
T |
|
| Q |
254 |
gttgagaacagcttgtgagagggctaaaaggacactgtcatatgatactgaggcaacaatcgacatagatgctatatatgagggagttgacttccattta |
353 |
Q |
| |
|
||| ||||| ||||| |||||||| ||||||||||| |||| ||||| |||||| | || |||||||||||| | |||||||| |||| || ||| |
|
|
| T |
8383042 |
gttaagaacggcttgcgagagggcaaaaaggacactttcatttgatattgaggccgcgattgacatagatgctctgtatgagggtattgattttaattct |
8383141 |
T |
|
| Q |
354 |
ttagtcactcgggccaagtttgaacaacttaacatggatctctttgaaaagtgtttggaga |
414 |
Q |
| |
|
| ||||||||||||||| ||||| ||||| || ||||| || |||||||||||| |||||| |
|
|
| T |
8383142 |
tcagtcactcgggccaaatttgagcaactcaatatggacctatttgaaaagtgtatggaga |
8383202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 57 - 412
Target Start/End: Complemental strand, 8570510 - 8570155
Alignment:
| Q |
57 |
atctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggag |
156 |
Q |
| |
|
|||||||| ||||| ||||| ||||||||||||||| |||||||||| || | | | | || ||| || || |||||| | ||||| || ||||| |||| |
|
|
| T |
8570510 |
atctttgaccttggcggtggaacttttgatgtgtctattctcacagttaaggataacaactatgaagtcaaggccactgctggagacactcacctgggag |
8570411 |
T |
|
| Q |
157 |
gagaggactttgataacagaatggttcac-catttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctcttaggaggt |
255 |
Q |
| |
|
| || || ||||||||||||||| || || || || |||||| |||| | || |||||| || | |||| ||||| ||||| ||| || | ||||||| |
|
|
| T |
8570410 |
gtgaagattttgataacagaatg-ttgactcactttgtgaagaagttcaagaagaagaacaacgaggatattagtaggaacccaaaagccttgaggaggt |
8570312 |
T |
|
| Q |
256 |
tgagaacagcttgtgagagggctaaaaggacactgtcatatgatactgaggcaacaatcgacatagatgctatatatgagggagttgacttccatttatt |
355 |
Q |
| |
|
| |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| || |||||||||||||| ||||| |||||||| || || |
|
|
| T |
8570311 |
taagaacagcttgtgagagggcaaaaaggacactttcatatgatactgaggccacaattgagctagatgctatatataagggaattgacttcagttcatc |
8570212 |
T |
|
| Q |
356 |
agtcactcgggccaagtttgaacaacttaacatggatctctttgaaaagtgtttgga |
412 |
Q |
| |
|
| | || |||||||||||||| || | || ||| | ||||||||||||||| |||| |
|
|
| T |
8570211 |
aataacccgggccaagtttgaggaaatgaatatgaacctctttgaaaagtgtatgga |
8570155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 54 - 407
Target Start/End: Complemental strand, 8538238 - 8537885
Alignment:
| Q |
54 |
ttcatctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctag |
153 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| ||||| || ||| | || | || |||| || || |||||| |||||||||| ||||| | |
|
|
| T |
8538238 |
ttcatctttgatcttggtggtggaacttttgatgtatctctccttacattgaagaataatgcctttacagtcaaggccactgccggagatactcaccttg |
8538139 |
T |
|
| Q |
154 |
gaggagaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctcttaggag |
253 |
Q |
| |
|
||||||||||||||||||| | |||| | ||||| ||||| || || | |||||| || ||||| || ||||||| || ||| ||||| |||| |
|
|
| T |
8538138 |
gaggagaggactttgataatcggttggtgaatcattttgtgaatgaattgaagaggaaaaacaaagttgacattagtggaaattcaaaagctctgaggaa |
8538039 |
T |
|
| Q |
254 |
gttgagaacagcttgtgagagggctaaaaggacactgtcatatgatactgaggcaacaatcgacatagatgctatatatgagggagttgacttccattta |
353 |
Q |
| |
|
||||||||| || || |||||||| |||||| | || || || || ||||| || ||||| || ||||||||||||| | |||| ||||| ||| || | |
|
|
| T |
8538038 |
gttgagaactgcatgcgagagggcaaaaaggtcgctttcttacgacactgaagccacaattgatatagatgctatatgtcagggtgttgatttctgttca |
8537939 |
T |
|
| Q |
354 |
ttagtcactcgggccaagtttgaacaacttaacatggatctctttgaaaagtgt |
407 |
Q |
| |
|
| | ||||||||||||||||||| ||||| |||||||| ||||||||||||||| |
|
|
| T |
8537938 |
tcaatcactcgggccaagtttgagcaactcaacatggacctctttgaaaagtgt |
8537885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 54 - 407
Target Start/End: Complemental strand, 8602176 - 8601823
Alignment:
| Q |
54 |
ttcatctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctag |
153 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||| |||||||||||| | || | || |||||| || || |||||||||||||| || ||||| | |
|
|
| T |
8602176 |
ttcatatttgatcttggtggtggaacttttgatgtttctcttctcacaattaagaataatctctttgaagtcaaggccacttccggagacacacaccttg |
8602077 |
T |
|
| Q |
154 |
gaggagaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctcttaggag |
253 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||| || || | |||||| | |||||| ||| ||| ||||||||| | | |||| ||||| || |
|
|
| T |
8602076 |
gaggagaggactttgataaccgaatggtgaaccactttgttatggagttcaacaggaagtatatgaaggacattagtgggagcccgagggtgcttagaag |
8601977 |
T |
|
| Q |
254 |
gttgagaacagcttgtgagagggctaaaaggacactgtcatatgatactgaggcaacaatcgacatagatgctatatatgagggagttgacttccattta |
353 |
Q |
| |
|
||| ||||| || || |||||| | ||||||||||| |||| |||||| | || ||||| ||||||||| | ||| |||||| |||| ||||||| | |
|
|
| T |
8601976 |
gttaagaacggcctgcgagaggacaaaaaggacactttcatttgataccaatgcgacaattgacatagattccttatttgagggtattgatttccattca |
8601877 |
T |
|
| Q |
354 |
ttagtcactcgggccaagtttgaacaacttaacatggatctctttgaaaagtgt |
407 |
Q |
| |
|
| | ||||||||||||||||||| ||||| || |||| |||||| | |||||| |
|
|
| T |
8601876 |
tcaatcactcgggccaagtttgagcaactcaatgtggacctctttaagaagtgt |
8601823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 57 - 412
Target Start/End: Complemental strand, 8545832 - 8545477
Alignment:
| Q |
57 |
atctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggag |
156 |
Q |
| |
|
|||||||| ||||| ||||| ||||||||||||||| |||| ||| | ||| | | ||||||||| || |||||| | ||||| || ||||||| | |
|
|
| T |
8545832 |
atctttgaccttggcggtggaacttttgatgtgtctattcttacaattaaaaataaggtctttgatgtcaaggccactgctggagacacttacctaggcg |
8545733 |
T |
|
| Q |
157 |
gagaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctcttaggaggtt |
256 |
Q |
| |
|
| || |||||||||||||||||||| | | || ||||||||||| | ||||||||| || | |||| ||||| ||||| || || | |||||||| |
|
|
| T |
8545732 |
gtgaagactttgataacagaatggtgaattactttgtgaaggagttcaagaggaagaacaatgaggatattagtcggaacccagaagccttgaggaggtt |
8545633 |
T |
|
| Q |
257 |
gagaacagcttgtgagagggctaaaaggacactgtcatatgatactgaggcaacaatcgacatagatgctatatatgagggagttgacttccatttatta |
356 |
Q |
| |
|
|||||| || ||||||| ||| ||||||||||| ||||| || |||||||| ||||| ||| |||||||| ||||| | || ||||||| || || |
|
|
| T |
8545632 |
gagaactgcctgtgagaaggcaaaaaggacactttcatacgacactgaggccacaattgacctagatgctttatatcaaggtattgacttttgttcatgc |
8545533 |
T |
|
| Q |
357 |
gtcactcgggccaagtttgaacaacttaacatggatctctttgaaaagtgtttgga |
412 |
Q |
| |
|
||||||||||||||||||| ||| | || ||||| ||||||||||||||| |||| |
|
|
| T |
8545532 |
atcactcgggccaagtttgagcaattgaatatggacctctttgaaaagtgtatgga |
8545477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 58 - 289
Target Start/End: Complemental strand, 8659561 - 8659330
Alignment:
| Q |
58 |
tctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggagg |
157 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| | || ||| | || |||||| |||||| |||||||||||||| ||| | || ||||| ||||| |
|
|
| T |
8659561 |
tctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactcaccttggagg |
8659462 |
T |
|
| Q |
158 |
agaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctcttaggaggttg |
257 |
Q |
| |
|
|||||||||||||| ||||||||| || | || || ||||||| | | ||||||||||||||| ||||||| ||| ||| | | ||||||||| |
|
|
| T |
8659461 |
agaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatccttaaggaggttg |
8659362 |
T |
|
| Q |
258 |
agaacagcttgtgagagggctaaaaggacact |
289 |
Q |
| |
|
||||| || ||||||||||| || |||||||| |
|
|
| T |
8659361 |
agaactgcctgtgagagggcaaagaggacact |
8659330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 60 - 179
Target Start/End: Complemental strand, 8628728 - 8628609
Alignment:
| Q |
60 |
tttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggaggag |
159 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||||| | ||||||||| |||||| || ||||||||| | ||| |||| ||||| || |||| |
|
|
| T |
8628728 |
tttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccactgctggaaatactcaccttggtggag |
8628629 |
T |
|
| Q |
160 |
aggactttgataacagaatg |
179 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
8628628 |
aggactttgataacagaatg |
8628609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 60 - 285
Target Start/End: Complemental strand, 8654646 - 8654421
Alignment:
| Q |
60 |
tttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggaggag |
159 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| | |||||| | || |||||| |||||| |||||||||||| | ||| | || |||||||| |||| |
|
|
| T |
8654646 |
tttgatcttggtggtggtacttttgatgtgtctatactcacaattaagggtgatgtctttgacgtaaaagccactgctggaaacacgcacctagggggag |
8654547 |
T |
|
| Q |
160 |
aggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctcttaggaggttgag |
259 |
Q |
| |
|
| |||||||||||||||||||| || | || || ||||||| | | ||||||||||||||| |||| || ||| ||| | | ||||||||||| |
|
|
| T |
8654546 |
aagactttgataacagaatggtgtactactttgtagaggagttcaaaaagaagaataaagtggaaattagcggtaacccaaaatccttaaggaggttgag |
8654447 |
T |
|
| Q |
260 |
aacagcttgtgagagggctaaaagga |
285 |
Q |
| |
|
||| || ||||||||||| ||||||| |
|
|
| T |
8654446 |
aactgcctgtgagagggcaaaaagga |
8654421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 57 - 332
Target Start/End: Complemental strand, 8576525 - 8576250
Alignment:
| Q |
57 |
atctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggag |
156 |
Q |
| |
|
|||||||| ||||| ||||| ||||||||||||||| |||||||||| || || ||| || || || |||||| ||||||| || |||||||||| |
|
|
| T |
8576525 |
atctttgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggag |
8576426 |
T |
|
| Q |
157 |
gagaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctcttaggaggtt |
256 |
Q |
| |
|
| | ||||||||||||| |||||| | || || || |||||||| |||| ||| | |||| |||| |||||| ||| ||| || | |||||||| |
|
|
| T |
8576425 |
gccaagactttgataacataatggtggatcactttgttaaggagttcaggaacaagtacaaagaggatattagtgagaattcaaaagccttaaggaggtt |
8576326 |
T |
|
| Q |
257 |
gagaacagcttgtgagagggctaaaaggacactgtcatatgatactgaggcaacaatcgacatagatgctatatat |
332 |
Q |
| |
|
|||||| |||||||| | ||| ||||||||||| |||||||| ||||| || ||||| || |||||||||||||| |
|
|
| T |
8576325 |
gagaactgcttgtgaaaaggcaaaaaggacactttcatatgacactgatgccacaattgaactagatgctatatat |
8576250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 54 - 423
Target Start/End: Complemental strand, 8559535 - 8559161
Alignment:
| Q |
54 |
ttcatctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctag |
153 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||| |||||||||||| | || | || |||||| || || |||||||||||||| || ||||| | |
|
|
| T |
8559535 |
ttcatctttgatctcggtggtggaacttttgatgtttctcttctcacaattaagaataatctctttgaagtcaaggccacttccggagacacacacctcg |
8559436 |
T |
|
| Q |
154 |
gaggagaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaa-----taaagtggattttagtgggaacgcaagggctctt |
248 |
Q |
| |
|
|||||||||||||||||||||||||||| | || || || || |||||| ||||||||| |||||| || ||||||| || ||| | || |
|
|
| T |
8559435 |
gaggagaggactttgataacagaatggtgaaacactttgtaaaagagtttgagaggaagaacaaattaaagttgacattagtggtgacccaaaatccctg |
8559336 |
T |
|
| Q |
249 |
aggaggttgagaacagcttgtgagagggctaaaaggacactgtcatatgatactgaggcaacaatcgacatagatgctatatatgagggagttgacttcc |
348 |
Q |
| |
|
|| |||||| | | |||| || ||||| ||||| ||| || || ||| |||| ||||| |||||||||||||||| | |||| ||||||| |
|
|
| T |
8559335 |
agaaggttgcggaattcttgcgaaagggcaaaaagagaactttcttacatcactaaggccacaattgacatagatgctatatgtcagggcattgacttgt |
8559236 |
T |
|
| Q |
349 |
atttattagtcactcgggccaagtttgaacaacttaacatggatctctttgaaaagtgtttggagattgtcaaga |
423 |
Q |
| |
|
|| || | |||| ||||| |||||||| ||||| || ||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
8559235 |
gttcatcaatcacacgggctaagtttgagcaactgaatatggatctctttgaaaagtgtatggagattgccaaga |
8559161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 57 - 412
Target Start/End: Complemental strand, 8581899 - 8581544
Alignment:
| Q |
57 |
atctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggag |
156 |
Q |
| |
|
|||||||| ||||| ||||| ||||||||||||||| |||||||||| || | | || ||| || || |||||| | ||||| || ||||| |||| |
|
|
| T |
8581899 |
atctttgaccttggaggtggaacttttgatgtgtctattctcacagttaagaataacgactatgaagtcaaggccactgctggagacactcacctgggag |
8581800 |
T |
|
| Q |
157 |
gagaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctcttaggaggtt |
256 |
Q |
| |
|
| || || ||||||||||||||||| | || || ||| |||||| | ||| || |||||| ||| ||| ||| || ||| || |||| ||||| |
|
|
| T |
8581799 |
gggaagattttgataacagaatggtgaatcactttgtgtcggagttcaagagaaaacataaagaggagattattggaaatccaaaagccattagaaggtt |
8581700 |
T |
|
| Q |
257 |
gagaacagcttgtgagagggctaaaaggacactgtcatatgatactgaggcaacaatcgacatagatgctatatatgagggagttgacttccatttatta |
356 |
Q |
| |
|
||| || ||||||||||| || ||||||||||| |||||||| |||||||| ||||| ||| ||||| ||||| || | || |||||||| ||| | | |
|
|
| T |
8581699 |
gaggactgcttgtgagagagcgaaaaggacactttcatatgacactgaggccacaattgacctagattctatacatcaaggtattgacttctattcgtca |
8581600 |
T |
|
| Q |
357 |
gtcactcgggccaagtttgaacaacttaacatggatctctttgaaaagtgtttgga |
412 |
Q |
| |
|
| ||||||||||||||||| ||| | || ||| | ||||||||||||||| |||| |
|
|
| T |
8581599 |
ataactcgggccaagtttgagcaaatgaatatgaacctctttgaaaagtgtatgga |
8581544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 60 - 179
Target Start/End: Original strand, 8585678 - 8585797
Alignment:
| Q |
60 |
tttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggaggag |
159 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||||| | ||||||||| |||||| || ||||| || | ||| |||| ||||| || |||| |
|
|
| T |
8585678 |
tttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagcaaccgctggaaatactcaccttgggggag |
8585777 |
T |
|
| Q |
160 |
aggactttgataacagaatg |
179 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
8585778 |
gggactttgataacagaatg |
8585797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 60 - 181
Target Start/End: Original strand, 8636315 - 8636436
Alignment:
| Q |
60 |
tttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggaggag |
159 |
Q |
| |
|
||||||||||||||||| || || || |||||| | |||| | | |||||||| |||||| || ||||||||| ||||||| || ||||| ||||||| |
|
|
| T |
8636315 |
tttgatcttggtggtggtacattcgacgtgtctatactcaaaattaaaggtgaagtctttgaagttaaagccactgccggagacacacaccttggaggag |
8636414 |
T |
|
| Q |
160 |
aggactttgataacagaatggt |
181 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
8636415 |
aggactttgataacagaatggt |
8636436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 10494344 - 10494467
Alignment:
| Q |
58 |
tctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggagg |
157 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||| | |||||| | || |||||| |||||| |||||||||||| | || | || ||||| || || |
|
|
| T |
10494344 |
tctttgatctgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccactgcaggtaacactcaccttggggg |
10494443 |
T |
|
| Q |
158 |
agaggactttgataacagaatggt |
181 |
Q |
| |
|
||||||||| |||||||||||||| |
|
|
| T |
10494444 |
agaggacttcgataacagaatggt |
10494467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 1301658 - 1301535
Alignment:
| Q |
58 |
tctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggagg |
157 |
Q |
| |
|
||||||| ||||| ||||| ||||||||||||||| | || || |||| || ||| |||||| |||||||||||| ||| |||| ||||| ||||| |
|
|
| T |
1301658 |
tctttgaccttggcggtggtacttttgatgtgtctatccttaccatcaagggcgatgtctttgaagtaaaagccactggtggaaatactcaccttggagg |
1301559 |
T |
|
| Q |
158 |
agaggactttgataacagaatggt |
181 |
Q |
| |
|
||||||||||||||| |||||||| |
|
|
| T |
1301558 |
agaggactttgataatagaatggt |
1301535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 58 - 285
Target Start/End: Complemental strand, 8667617 - 8667390
Alignment:
| Q |
58 |
tctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggagg |
157 |
Q |
| |
|
|||||||||| ||||| || ||||||||||||||| | |||||| | || |||||| |||||| || ||||||||| | ||| | || ||||| || || |
|
|
| T |
8667617 |
tctttgatctgggtggcgggacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtgaaagccactgcaggaaacactcaccttggggg |
8667518 |
T |
|
| Q |
158 |
agaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctcttaggaggttg |
257 |
Q |
| |
|
|||||||| |||||||||||||| || |||| || ||||||| | | ||||||||||||||| | ||| |||| ||| | | ||||||||| |
|
|
| T |
8667517 |
cgaggacttcgataacagaatggtgaactattttgttgaggagttaaaaaagaagaataaagtggacatcagtcagaacccaaaatccttaaggaggttg |
8667418 |
T |
|
| Q |
258 |
agaacagcttgtgagagggctaaaagga |
285 |
Q |
| |
|
||||| || ||||||||||| ||||||| |
|
|
| T |
8667417 |
agaactgcctgtgagagggcaaaaagga |
8667390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 285
Target Start/End: Original strand, 13333426 - 13333653
Alignment:
| Q |
58 |
tctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggagg |
157 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||| | || ||| | | |||||| |||||| ||||||||||| | ||| | || ||||| || || |
|
|
| T |
13333426 |
tctttgatctgggtggtggtacttttgatgtgtctatccttacaattatgggtgatgtctttgaagtaaaagccaccgcaggaaacactcaccttggggg |
13333525 |
T |
|
| Q |
158 |
agaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctcttaggaggttg |
257 |
Q |
| |
|
||| ||||| |||||||||||||| || |||| || ||||||| | | ||||||||| || ||| | ||||||||| ||| | | ||||||||| |
|
|
| T |
13333526 |
agaagacttcgataacagaatggtgaactattttgttgaggagttcaaaaagaagaataacgtcgatatcagtgggaacccaaaatccttaaggaggttg |
13333625 |
T |
|
| Q |
258 |
agaacagcttgtgagagggctaaaagga |
285 |
Q |
| |
|
||||| || |||||||||| ||||||| |
|
|
| T |
13333626 |
agaactgcctgtgagagggaaaaaagga |
13333653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 48 - 274
Target Start/End: Original strand, 8017373 - 8017599
Alignment:
| Q |
48 |
aatgtgttcatctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagataccc |
147 |
Q |
| |
|
|||||||| |||||||| | || ||||| |||||||||||||||||||| || | ||| | || ||||| || || || ||| | || ||||||| |
|
|
| T |
8017373 |
aatgtgttgatctttgacttgggaggtggtacttttgatgtgtctcttcttactattgaagagggtatttttgaagttaaggctactgctggtgataccc |
8017472 |
T |
|
| Q |
148 |
acctaggaggagaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctct |
247 |
Q |
| |
|
| || || || || || ||||| |||||||||||| | ||||| || ||||||||| ||||||||| || |||| ||||||| ||| | || || || |
|
|
| T |
8017473 |
atcttggtggtgaagattttgacaacagaatggttaatcattttgttcaggagtttaagaggaagaacaagaaggatattagtggaaaccctagagcact |
8017572 |
T |
|
| Q |
248 |
taggaggttgagaacagcttgtgagag |
274 |
Q |
| |
|
|||||||||||| |||||||||||||| |
|
|
| T |
8017573 |
taggaggttgaggacagcttgtgagag |
8017599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 284
Target Start/End: Complemental strand, 6789621 - 6789484
Alignment:
| Q |
147 |
cacctaggaggagaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctc |
246 |
Q |
| |
|
||||| ||||||||||||||||||||| || |||| || | || | ||||||||| ||||||||| ||||||||| ||| ||| ||| ||||||| |
|
|
| T |
6789621 |
cacctcggaggagaggactttgataaccgattggtaaactactttgcagaggagtttaagaggaagaacaaagtggatattactggaaactcaagggcct |
6789522 |
T |
|
| Q |
247 |
ttaggaggttgagaacagcttgtgagagggctaaaagg |
284 |
Q |
| |
|
| || ||||||||||| || ||||| ||||| |||||| |
|
|
| T |
6789521 |
taagaaggttgagaactgcgtgtgaaagggccaaaagg |
6789484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 181
Target Start/End: Complemental strand, 8647090 - 8646952
Alignment:
| Q |
43 |
aacgaaatgtgttcatctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggaga |
142 |
Q |
| |
|
|||||||| | |||||||| || ||||||||||| ||||||||||||||||| || ||| | || | | | |||| |||| |||||||| | ||| | |
|
|
| T |
8647090 |
aacgaaatatattcatcttcgaccttggtggtggaacttttgatgtgtctctccttacaattaaggataaggtctttcatgttaaagccaccgctggaaa |
8646991 |
T |
|
| Q |
143 |
tacccacctaggaggagaggactttgataacagaatggt |
181 |
Q |
| |
|
|| ||||| ||||||||||||||||||| |||||||| |
|
|
| T |
8646990 |
cactcacctcggaggagaggactttgatagtagaatggt |
8646952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 274
Target Start/End: Complemental strand, 8102872 - 8102649
Alignment:
| Q |
51 |
gtgttcatctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacc |
150 |
Q |
| |
|
||||| ||||||||| | |||||||| |||||||||||||| ||||| || | ||| | || ||||| || || || ||| | || |||||||| | |
|
|
| T |
8102872 |
gtgttgatctttgatttgggtggtggtacttttgatgtgtcacttcttactattgaagagggtatatttgaagttaaggctactgcaggtgatacccatc |
8102773 |
T |
|
| Q |
151 |
taggaggagaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctcttag |
250 |
Q |
| |
|
| || || || || |||||||||||||||||| |||||| || | ||||||| ||||||||| || |||| |||| || ||| | ||||| ||||| |
|
|
| T |
8102772 |
ttggtggtgaagattttgataacagaatggttacccattttgttcaagagtttaagaggaagaacaagaaggatattagcggaaaccctagggcacttag |
8102673 |
T |
|
| Q |
251 |
gaggttgagaacagcttgtgagag |
274 |
Q |
| |
|
||| |||||||| || |||||||| |
|
|
| T |
8102672 |
gagattgagaaccgcatgtgagag |
8102649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 17268137 - 17268101
Alignment:
| Q |
58 |
tctttgatcttggtggtggcacttttgatgtgtctct |
94 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
17268137 |
tctttgaccttggtggtgggacttttgatgtgtctct |
17268101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 60 - 414
Target Start/End: Complemental strand, 12528700 - 12528346
Alignment:
| Q |
60 |
tttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggaggag |
159 |
Q |
| |
|
||||| ||||| ||||| |||||||||||||||||||| ||||| || | || ||| || || || |||||| ||||||| || ||||| ||||||| |
|
|
| T |
12528700 |
tttgaccttggcggtggaacttttgatgtgtctcttcttacagtaaagaataatgtcttcgaagtcaaggccactgccggagacactcaccttggaggag |
12528601 |
T |
|
| Q |
160 |
aggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctcttaggaggttgag |
259 |
Q |
| |
|
||||||||||||| ||||||| | || || ||||| ||||||| ||||||||| ||||| || ||| ||||||| ||| || || ||||| ||||| |
|
|
| T |
12528600 |
aggactttgataatcgaatggtgaatcactttgtgaaagagtttaagaggaagaacaaagttgacattattgggaactcaaaagccctaaggagattgag |
12528501 |
T |
|
| Q |
260 |
aacagcttgtgagagggctaaaaggacactgtcatatgatactgaggcaacaatcgacatagatgctatatatgagggagttgacttccatttattagtc |
359 |
Q |
| |
|
||| || |||| ||| ||||||||||| ||||| ||||| ||||| ||||| |||||||||||||||| |||||| |||||||| | || | || |
|
|
| T |
12528500 |
aactaactgcgagaaggcgaaaaggacactttcatacgatacagaggctacaattgacatagatgctatatgtgagggcattgacttctgctcatcaatc |
12528401 |
T |
|
| Q |
360 |
actcgggccaagtttgaacaacttaacatggatctctttgaaaagtgtttggaga |
414 |
Q |
| |
|
||||| |||||||| || ||||| || ||||| ||||||||||||||| |||||| |
|
|
| T |
12528400 |
actcgagccaagttcgagcaactgaatatggacctctttgaaaagtgtatggaga |
12528346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 43745051 - 43745011
Alignment:
| Q |
54 |
ttcatctttgatcttggtggtggcacttttgatgtgtctct |
94 |
Q |
| |
|
||||||||||| || |||||||| ||||||||||||||||| |
|
|
| T |
43745051 |
ttcatctttgacctgggtggtgggacttttgatgtgtctct |
43745011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 58 - 289
Target Start/End: Original strand, 16661962 - 16662193
Alignment:
| Q |
58 |
tctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggagg |
157 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||| |||||| || ||||||||||| ||| | || ||||| || || |
|
|
| T |
16661962 |
tctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacactcacctcggggg |
16662061 |
T |
|
| Q |
158 |
agaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctcttaggaggttg |
257 |
Q |
| |
|
|||||||||||||||||||||| | || | || ||||| || |||| |||||||| ||||||||| | | | |||| |||| || | ||||||||| |
|
|
| T |
16662062 |
agaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagccttgaggaggttg |
16662161 |
T |
|
| Q |
258 |
agaacagcttgtgagagggctaaaaggacact |
289 |
Q |
| |
|
||||| ||||||| | ||| ||||||||||| |
|
|
| T |
16662162 |
agaacttcttgtgaaaaggcgaaaaggacact |
16662193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 58 - 289
Target Start/End: Original strand, 16657487 - 16657718
Alignment:
| Q |
58 |
tctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggagg |
157 |
Q |
| |
|
||||||| ||||| ||||| ||||||||||||||| | || ||| | || |||||| ||||| |||||||||||| ||||| | || ||||| || || |
|
|
| T |
16657487 |
tctttgaccttggcggtggtacttttgatgtgtctatccttacaattaagggtgatgtttttgaggtaaaagccactgccggaaacactcaccttggggg |
16657586 |
T |
|
| Q |
158 |
agaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctcttaggaggttg |
257 |
Q |
| |
|
|||||||||||||||||||| ||| || | || || |||||||| | ||||||||| ||||| | ||||||||| |||| || | ||||||||| |
|
|
| T |
16657587 |
agaggactttgataacagaacggtgaactactttgtagaggagtttcaaaagaagaataaggtggacataagtgggaactcaagagccttgaggaggttg |
16657686 |
T |
|
| Q |
258 |
agaacagcttgtgagagggctaaaaggacact |
289 |
Q |
| |
|
||||| || ||||||||||| || |||||||| |
|
|
| T |
16657687 |
agaactgcatgtgagagggcaaagaggacact |
16657718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 12234885 - 12234764
Alignment:
| Q |
60 |
tttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggaggag |
159 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||| || ||| |||||||| || ||| | || |||||||| ||||| | || ||||| || |||| |
|
|
| T |
12234885 |
tttgatctcggcggtggcacttttgatgtgtctctcctaacaatcaaaggtaatgtcttccaagttaaagccacagccggaaacactcacctcgggggag |
12234786 |
T |
|
| Q |
160 |
aggactttgataacagaatggt |
181 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
12234785 |
aggactttgataacagaatggt |
12234764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 12258551 - 12258587
Alignment:
| Q |
58 |
tctttgatcttggtggtggcacttttgatgtgtctct |
94 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12258551 |
tctttgatcttggtggtggcacttttgatgtgtctct |
12258587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 43625625 - 43625576
Alignment:
| Q |
43 |
aacgaaatgtgttcatctttgatcttggtggtggcacttttgatgtgtct |
92 |
Q |
| |
|
|||||||| | ||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
43625625 |
aacgaaatattttcatctttgaccttggtggtggtacttttgatgtgtct |
43625576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 7542422 - 7542390
Alignment:
| Q |
60 |
tttgatcttggtggtggcacttttgatgtgtct |
92 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |
|
|
| T |
7542422 |
tttgatcttggcggtggcacttttgatgtgtct |
7542390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 14703606 - 14703570
Alignment:
| Q |
58 |
tctttgatcttggtggtggcacttttgatgtgtctct |
94 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
14703606 |
tctttgatcttggtggtggtacttttgacgtgtctct |
14703570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 4678528 - 4678651
Alignment:
| Q |
58 |
tctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggagg |
157 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||| | || | | |||| |||| | |||||| |||||||||||| | ||| | || |||||||| || |
|
|
| T |
4678528 |
tctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacactcacctaggtgg |
4678627 |
T |
|
| Q |
158 |
agaggactttgataacagaatggt |
181 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
4678628 |
agaggactttgataacagaatggt |
4678651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 284
Target Start/End: Complemental strand, 15595143 - 15595006
Alignment:
| Q |
147 |
cacctaggaggagaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctc |
246 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| || | || | | |||| || | || |||||| ||||||||| ||| ||||||| ||||||| |
|
|
| T |
15595143 |
caccttggaggagaggactttgataacagaatggtcaactactttgcgcaggaattcaagacgaagaacaaagtggatattactgggaacccaagggcct |
15595044 |
T |
|
| Q |
247 |
ttaggaggttgagaacagcttgtgagagggctaaaagg |
284 |
Q |
| |
|
| ||||| |||||||| || || || ||||| |||||| |
|
|
| T |
15595043 |
tgaggagattgagaactgcgtgcgaaagggcaaaaagg |
15595006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 262
Target Start/End: Original strand, 34466763 - 34466967
Alignment:
| Q |
58 |
tctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggagg |
157 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||| || ||| | || | | || |||||| || || |||||||| || | || ||||| ||| | |
|
|
| T |
34466763 |
tctttgaccttggtggtgggacttttgatgtgtctctccttacaattaaggataatgtctttgaagttaaggccacttctggtaacactcacctcggacg |
34466862 |
T |
|
| Q |
158 |
agaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctcttaggaggttg |
257 |
Q |
| |
|
||||||||||||||| ||||||| |||| || | |||||||| | ||||||| |||| |||| ||||||| ||| | || ||| | ||||||||| |
|
|
| T |
34466863 |
agaggactttgataatagaatggcgaaccactttgcaaaggagttcaagaggaagcataataaggatattagtggaaaccctagagctttgaggaggttg |
34466962 |
T |
|
| Q |
258 |
agaac |
262 |
Q |
| |
|
||||| |
|
|
| T |
34466963 |
agaac |
34466967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 15595232 - 15595198
Alignment:
| Q |
58 |
tctttgatcttggtggtggcacttttgatgtgtct |
92 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
15595232 |
tctttgatcttggtggtggcacttttgatgtgtct |
15595198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 58 - 223
Target Start/End: Original strand, 9335861 - 9336026
Alignment:
| Q |
58 |
tctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggagg |
157 |
Q |
| |
|
|||||||||| ||||| || ||||||||||||||| | |||||| | || |||||| ||||| ||||||||||| | ||| | || ||||| ||||| |
|
|
| T |
9335861 |
tctttgatctgggtggcggtacttttgatgtgtctatcctcacaattaagggtgatctatttgaagtaaaagccaccgcaggaaacacgcaccttggagg |
9335960 |
T |
|
| Q |
158 |
agaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtgga |
223 |
Q |
| |
|
|||||||||||||||||||||||| || |||| ||| | ||||| | | ||||||||||||||| |
|
|
| T |
9335961 |
cgaggactttgataacagaatggttaactattttgtggaagagttaaaaaagaagaataaagtgga |
9336026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 58 - 179
Target Start/End: Complemental strand, 30775450 - 30775329
Alignment:
| Q |
58 |
tctttgatcttggtggtggcacttttgatgtgtctcttctcacagtcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggagg |
157 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||| | | || |||| ||||| || ||||| ||| | ||| | || ||| | || || |
|
|
| T |
30775450 |
tctttgatcttggtggtgggacttttgatgtgtctcttctcaccattagagatgatgtgtttgaagttaaagcaactgctggaaacactcacatcggggg |
30775351 |
T |
|
| Q |
158 |
agaggactttgataacagaatg |
179 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
30775350 |
agaggactttgataacagaatg |
30775329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 289
Target Start/End: Complemental strand, 54396514 - 54396390
Alignment:
| Q |
165 |
tttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctcttaggaggttgagaacag |
264 |
Q |
| |
|
||||||||||||||||| | ||||| || ||||||||||||||| ||||| |||| ||||||| || ||||| ||| | ||||| || ||||||| |
|
|
| T |
54396514 |
tttgataacagaatggtgaatcattttgtttcggagtttaggaggaaaaataagaaggatattagtggtaatgcaagagctttgaggagattaagaacag |
54396415 |
T |
|
| Q |
265 |
cttgtgagagggctaaaaggacact |
289 |
Q |
| |
|
|||||||||| ||||| || ||||| |
|
|
| T |
54396414 |
cttgtgagagagctaagagaacact |
54396390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 286
Target Start/End: Original strand, 23596662 - 23596783
Alignment:
| Q |
165 |
tttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctcttaggaggttgagaacag |
264 |
Q |
| |
|
||||||||||| ||||| ||||||| || | || || | |||||||||||| ||| ||||||| || ||||||||||||| ||||||||||| | |
|
|
| T |
23596662 |
tttgataacaggatggtgaaccattttgttcaagaattcaagaggaagaataagaaagatattagtggaaatccaagggctcttagaaggttgagaactg |
23596761 |
T |
|
| Q |
265 |
cttgtgagagggctaaaaggac |
286 |
Q |
| |
|
|||||||||| ||||| ||||| |
|
|
| T |
23596762 |
cttgtgagagagctaagaggac |
23596783 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 286
Target Start/End: Original strand, 23587810 - 23587931
Alignment:
| Q |
165 |
tttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggattttagtgggaacgcaagggctcttaggaggttgagaacag |
264 |
Q |
| |
|
||||||||||| ||||| ||||||| || | || || | |||||||||||| |||| ||||||| || ||||||||||||| || |||||||| | |
|
|
| T |
23587810 |
tttgataacaggatggtgaaccattttgttcaagaattcaagaggaagaataagaaggatattagtggaaatccaagggctcttagaagattgagaactg |
23587909 |
T |
|
| Q |
265 |
cttgtgagagggctaaaaggac |
286 |
Q |
| |
|
|||| ||||| ||||| ||||| |
|
|
| T |
23587910 |
cttgcgagagagctaagaggac |
23587931 |
T |
|
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Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 28220164 - 28220113
Alignment:
| Q |
43 |
aacgaaatgtgttcatctttgatcttggtggtggcacttttgatgtgtctct |
94 |
Q |
| |
|
|||||||| | ||||||||||| || |||||||| ||||||||||||||||| |
|
|
| T |
28220164 |
aacgaaatattttcatctttgacctgggtggtgggacttttgatgtgtctct |
28220113 |
T |
|
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Target: chr6 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 11133124 - 11133048
Alignment:
| Q |
126 |
aaagccacttccggagatacccacctaggaggagaggactttgataacagaatggttcaccatttggtgaaggagtt |
202 |
Q |
| |
|
||||||||| | |||||||| ||||| || ||| | ||||||||||||| |||||| ||||||| ||||| ||||| |
|
|
| T |
11133124 |
aaagccactgctggagatactcacctcgggggacaagactttgataacacaatggtgaaccatttcgtgaaagagtt |
11133048 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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