View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6175_high_2 (Length: 384)

Name: NF6175_high_2
Description: NF6175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6175_high_2
NF6175_high_2
[»] chr5 (64 HSPs)
chr5 (24-159)||(14221726-14221861)
chr5 (204-334)||(5002144-5002274)
chr5 (215-334)||(18473489-18473608)
chr5 (215-335)||(22101921-22102041)
chr5 (206-349)||(34297180-34297326)
chr5 (199-324)||(33478131-33478256)
chr5 (215-353)||(38394423-38394561)
chr5 (200-337)||(16619028-16619166)
chr5 (215-349)||(21488298-21488432)
chr5 (199-334)||(29299371-29299507)
chr5 (215-315)||(36286074-36286174)
chr5 (199-334)||(13789731-13789866)
chr5 (228-335)||(36434706-36434813)
chr5 (218-312)||(919660-919754)
chr5 (199-324)||(10228087-10228216)
chr5 (199-334)||(11931983-11932119)
chr5 (199-334)||(13664945-13665073)
chr5 (199-334)||(29031036-29031170)
chr5 (235-334)||(18718252-18718354)
chr5 (227-349)||(38362378-38362499)
chr5 (215-299)||(1248878-1248963)
chr5 (218-334)||(15968325-15968440)
chr5 (228-295)||(18391526-18391593)
chr5 (199-334)||(22731258-22731392)
chr5 (205-334)||(27488361-27488489)
chr5 (234-334)||(39239808-39239909)
chr5 (205-349)||(1138223-1138366)
chr5 (223-315)||(32452252-32452343)
chr5 (197-349)||(38394425-38394577)
chr5 (199-334)||(1015155-1015289)
chr5 (251-344)||(8235428-8235521)
chr5 (218-337)||(26327546-26327665)
chr5 (215-337)||(3813985-3814108)
chr5 (199-333)||(10495206-10495340)
chr5 (208-349)||(10495206-10495347)
chr5 (235-340)||(14913141-14913246)
chr5 (215-331)||(19295972-19296089)
chr5 (277-341)||(8511460-8511524)
chr5 (219-275)||(14221864-14221920)
chr5 (258-324)||(14723410-14723476)
chr5 (241-343)||(36409639-36409741)
chr5 (218-330)||(29874335-29874447)
chr5 (236-331)||(3100418-3100513)
chr5 (215-334)||(13789746-13789865)
chr5 (252-331)||(25694128-25694207)
chr5 (285-349)||(22398126-22398190)
chr5 (236-312)||(25408575-25408651)
chr5 (215-334)||(12094253-12094371)
chr5 (246-325)||(15969091-15969170)
chr5 (217-352)||(27600755-27600889)
chr5 (199-349)||(38393753-38393904)
chr5 (217-331)||(1098641-1098754)
chr5 (233-331)||(13391544-13391642)
chr5 (233-331)||(13391560-13391658)
chr5 (258-332)||(14338873-14338947)
chr5 (217-331)||(20502104-20502218)
chr5 (217-331)||(24173437-24173551)
chr5 (217-331)||(29002759-29002873)
chr5 (254-316)||(32911498-32911560)
chr5 (283-333)||(35349496-35349546)
chr5 (285-331)||(43506175-43506221)
chr5 (258-351)||(7749976-7750069)
chr5 (199-331)||(29299356-29299489)
chr5 (258-334)||(21090390-21090466)
[»] chr7 (92 HSPs)
chr7 (199-349)||(11668014-11668164)
chr7 (199-349)||(28677316-28677466)
chr7 (199-334)||(36245375-36245510)
chr7 (218-344)||(8566099-8566225)
chr7 (199-349)||(9979800-9979949)
chr7 (205-332)||(45441441-45441568)
chr7 (206-334)||(6838391-6838517)
chr7 (199-331)||(45533247-45533379)
chr7 (215-334)||(30869201-30869320)
chr7 (206-337)||(41850607-41850738)
chr7 (215-340)||(10462385-10462509)
chr7 (215-352)||(13807238-13807371)
chr7 (215-330)||(29365636-29365751)
chr7 (215-349)||(39153302-39153434)
chr7 (205-334)||(2523775-2523904)
chr7 (205-337)||(48082810-48082941)
chr7 (215-315)||(2399967-2400067)
chr7 (215-334)||(2680873-2680993)
chr7 (206-333)||(2610202-2610328)
chr7 (199-334)||(4925905-4926040)
chr7 (235-334)||(44682580-44682679)
chr7 (215-334)||(10007589-10007710)
chr7 (215-324)||(24163294-24163402)
chr7 (242-330)||(34117981-34118069)
chr7 (218-333)||(32811728-32811842)
chr7 (208-334)||(30823723-30823849)
chr7 (228-330)||(40142801-40142903)
chr7 (218-334)||(32811396-32811511)
chr7 (198-337)||(1366593-1366731)
chr7 (199-334)||(4826776-4826910)
chr7 (219-334)||(27231853-27231967)
chr7 (217-315)||(7456436-7456534)
chr7 (202-334)||(47942839-47942971)
chr7 (202-334)||(47948269-47948401)
chr7 (218-337)||(31227504-31227622)
chr7 (229-350)||(27163190-27163311)
chr7 (216-313)||(48838347-48838444)
chr7 (209-324)||(40176045-40176160)
chr7 (215-283)||(28298919-28298987)
chr7 (275-334)||(43174299-43174358)
chr7 (235-310)||(47987188-47987263)
chr7 (215-337)||(28020016-28020136)
chr7 (199-337)||(30486579-30486717)
chr7 (217-330)||(45123263-45123376)
chr7 (230-334)||(39153301-39153405)
chr7 (215-330)||(8566099-8566214)
chr7 (197-332)||(36245392-36245527)
chr7 (199-337)||(2523781-2523919)
chr7 (199-340)||(6838376-6838515)
chr7 (217-331)||(10674140-10674254)
chr7 (199-337)||(12426541-12426679)
chr7 (205-337)||(2610192-2610323)
chr7 (198-338)||(27163171-27163311)
chr7 (199-331)||(33901055-33901187)
chr7 (217-349)||(40234783-40234915)
chr7 (199-362)||(3411331-3411494)
chr7 (199-334)||(11668029-11668164)
chr7 (215-334)||(28677331-28677450)
chr7 (199-334)||(41850595-41850730)
chr7 (233-324)||(42457013-42457103)
chr7 (217-331)||(8169110-8169223)
chr7 (217-331)||(22618180-22618294)
chr7 (233-315)||(40362003-40362085)
chr7 (217-331)||(41395679-41395793)
chr7 (217-339)||(45981017-45981137)
chr7 (197-249)||(13807239-13807291)
chr7 (285-349)||(23870978-23871042)
chr7 (224-339)||(2399961-2400076)
chr7 (236-331)||(23797361-23797456)
chr7 (252-331)||(28752127-28752206)
chr7 (210-349)||(30486579-30486718)
chr7 (277-331)||(7456436-7456490)
chr7 (285-343)||(16861517-16861575)
chr7 (251-345)||(18819978-18820072)
chr7 (218-256)||(21124482-21124520)
chr7 (217-331)||(41487808-41487922)
chr7 (280-334)||(41863661-41863715)
chr7 (254-319)||(28409597-28409662)
chr7 (300-344)||(2680862-2680906)
chr7 (241-309)||(5761795-5761863)
chr7 (199-263)||(10007661-10007725)
chr7 (218-330)||(18064740-18064852)
chr7 (236-312)||(21586846-21586922)
chr7 (252-316)||(29168391-29168455)
chr7 (230-318)||(29835114-29835202)
chr7 (251-331)||(30457778-30457857)
chr7 (285-349)||(32811377-32811441)
chr7 (277-349)||(33901115-33901187)
chr7 (235-315)||(34564958-34565038)
chr7 (243-315)||(35436265-35436337)
chr7 (205-313)||(44682571-44682679)
chr7 (199-331)||(45025611-45025743)
[»] chr1 (86 HSPs)
chr1 (215-349)||(38040291-38040425)
chr1 (215-334)||(38737946-38738065)
chr1 (204-334)||(49944847-49944977)
chr1 (199-340)||(519832-519973)
chr1 (205-337)||(26070835-26070967)
chr1 (215-351)||(34332473-34332609)
chr1 (202-349)||(44939068-44939215)
chr1 (215-328)||(15342957-15343070)
chr1 (206-337)||(27819317-27819449)
chr1 (208-334)||(23923564-23923690)
chr1 (210-349)||(50155307-50155447)
chr1 (199-334)||(26924227-26924362)
chr1 (218-334)||(38590084-38590202)
chr1 (205-334)||(37515095-37515224)
chr1 (215-334)||(8971242-8971361)
chr1 (215-337)||(11386165-11386287)
chr1 (220-313)||(6661549-6661642)
chr1 (215-334)||(47912832-47912948)
chr1 (215-334)||(26760188-26760307)
chr1 (216-334)||(24305681-24305799)
chr1 (215-339)||(34146820-34146943)
chr1 (206-337)||(6793605-6793736)
chr1 (199-349)||(29256600-29256747)
chr1 (199-334)||(34662696-34662830)
chr1 (199-334)||(47678255-47678389)
chr1 (215-340)||(640530-640654)
chr1 (199-306)||(37178952-37179059)
chr1 (199-331)||(18744576-18744704)
chr1 (218-334)||(47844548-47844663)
chr1 (215-306)||(15286024-15286115)
chr1 (199-334)||(43929345-43929479)
chr1 (197-265)||(39748616-39748684)
chr1 (255-334)||(7375524-7375603)
chr1 (199-357)||(50155288-50155447)
chr1 (199-313)||(5891725-5891839)
chr1 (272-334)||(23923408-23923470)
chr1 (199-337)||(26070823-26070961)
chr1 (199-349)||(38040275-38040425)
chr1 (199-265)||(52427346-52427412)
chr1 (237-340)||(26823145-26823248)
chr1 (196-334)||(34332472-34332610)
chr1 (199-332)||(37096110-37096243)
chr1 (215-335)||(34146818-34146937)
chr1 (230-349)||(15285466-15285585)
chr1 (217-331)||(18038705-18038819)
chr1 (215-332)||(2855100-2855217)
chr1 (215-343)||(38737936-38738064)
chr1 (206-334)||(49944839-49944967)
chr1 (215-262)||(2351148-2351195)
chr1 (217-331)||(18038705-18038819)
chr1 (199-334)||(26924212-26924347)
chr1 (241-312)||(31362455-31362526)
chr1 (205-334)||(11386159-11386288)
chr1 (233-331)||(28038840-28038938)
chr1 (215-256)||(7375197-7375238)
chr1 (235-312)||(9002761-9002838)
chr1 (284-337)||(45848950-45849003)
chr1 (277-333)||(10506291-10506347)
chr1 (215-343)||(23923565-23923693)
chr1 (233-349)||(26545030-26545146)
chr1 (236-275)||(9387259-9387298)
chr1 (215-266)||(14647011-14647062)
chr1 (233-316)||(15290606-15290689)
chr1 (217-334)||(18744576-18744689)
chr1 (199-334)||(26760187-26760322)
chr1 (252-331)||(41007725-41007804)
chr1 (215-334)||(44939080-44939199)
chr1 (236-335)||(47883976-47884075)
chr1 (299-349)||(2351132-2351182)
chr1 (284-334)||(5368854-5368904)
chr1 (233-331)||(28038856-28038954)
chr1 (199-249)||(29256697-29256747)
chr1 (217-331)||(31050267-31050381)
chr1 (289-331)||(34491211-34491253)
chr1 (232-334)||(47946015-47946117)
chr1 (228-318)||(48636744-48636834)
chr1 (285-334)||(25021245-25021294)
chr1 (254-331)||(33765837-33765914)
chr1 (236-312)||(8984220-8984296)
chr1 (252-316)||(15290626-15290690)
chr1 (236-312)||(15351747-15351823)
chr1 (233-301)||(20273163-20273231)
chr1 (254-322)||(23392587-23392655)
chr1 (235-275)||(29064184-29064224)
chr1 (280-352)||(39748615-39748687)
chr1 (254-322)||(47991799-47991867)
[»] chr4 (95 HSPs)
chr4 (215-334)||(48361066-48361185)
chr4 (199-334)||(48195904-48196039)
chr4 (199-334)||(8347659-8347794)
chr4 (215-334)||(25477560-25477679)
chr4 (199-334)||(30191910-30192045)
chr4 (199-350)||(44111744-44111895)
chr4 (215-349)||(50121436-50121570)
chr4 (199-338)||(4386146-4386285)
chr4 (199-337)||(3162906-3163044)
chr4 (215-337)||(36132650-36132772)
chr4 (215-349)||(42670763-42670897)
chr4 (228-334)||(42169071-42169177)
chr4 (218-334)||(16412248-16412364)
chr4 (215-311)||(35429788-35429884)
chr4 (215-348)||(41116562-41116694)
chr4 (199-315)||(17284734-17284850)
chr4 (215-334)||(21554124-21554242)
chr4 (208-315)||(55951670-55951777)
chr4 (206-312)||(32714275-32714381)
chr4 (215-313)||(45096609-45096707)
chr4 (228-334)||(53225672-53225778)
chr4 (204-334)||(53658368-53658498)
chr4 (215-344)||(45828430-45828559)
chr4 (219-313)||(9044406-9044500)
chr4 (200-334)||(44061388-44061521)
chr4 (215-337)||(46434110-46434231)
chr4 (199-344)||(47943731-47943876)
chr4 (199-334)||(47866050-47866184)
chr4 (215-334)||(43117867-43117988)
chr4 (229-334)||(696379-696484)
chr4 (229-334)||(764677-764782)
chr4 (218-334)||(20459259-20459374)
chr4 (199-334)||(20745331-20745465)
chr4 (252-334)||(9894639-9894721)
chr4 (204-334)||(43020770-43020899)
chr4 (199-334)||(48361051-48361186)
chr4 (218-344)||(3043796-3043921)
chr4 (215-334)||(31977759-31977880)
chr4 (210-344)||(33010678-33010812)
chr4 (218-334)||(55190685-55190800)
chr4 (215-334)||(2583097-2583216)
chr4 (215-278)||(19150793-19150856)
chr4 (199-334)||(42804270-42804404)
chr4 (233-334)||(26066383-26066484)
chr4 (215-335)||(4386151-4386271)
chr4 (257-340)||(23226958-23227041)
chr4 (215-334)||(30191911-30192030)
chr4 (199-349)||(40780249-40780396)
chr4 (251-333)||(14859720-14859802)
chr4 (215-332)||(28020496-28020609)
chr4 (217-349)||(43141783-43141915)
chr4 (215-305)||(41328671-41328755)
chr4 (233-315)||(39897138-39897220)
chr4 (283-349)||(52535950-52536016)
chr4 (199-340)||(46462384-46462525)
chr4 (199-320)||(53225672-53225793)
chr4 (218-334)||(20956904-20957019)
chr4 (215-315)||(26066384-26066484)
chr4 (198-334)||(44111759-44111895)
chr4 (236-312)||(54106507-54106583)
chr4 (280-331)||(24100776-24100827)
chr4 (280-331)||(24100884-24100935)
chr4 (215-274)||(50685471-50685530)
chr4 (203-313)||(25700456-25700566)
chr4 (235-333)||(25700468-25700566)
chr4 (217-331)||(29686417-29686531)
chr4 (217-331)||(54864081-54864195)
chr4 (209-334)||(27841846-27841969)
chr4 (215-264)||(37991501-37991550)
chr4 (233-313)||(1140900-1140980)
chr4 (199-271)||(16412233-16412305)
chr4 (217-349)||(31853066-31853198)
chr4 (258-334)||(32517784-32517860)
chr4 (252-331)||(2401053-2401132)
chr4 (217-331)||(8347508-8347623)
chr4 (258-313)||(30206526-30206581)
chr4 (217-331)||(31853084-31853198)
chr4 (200-263)||(41116562-41116625)
chr4 (198-305)||(42160016-42160123)
chr4 (199-334)||(50121436-50121571)
chr4 (229-315)||(20814554-20814640)
chr4 (217-331)||(35877331-35877445)
chr4 (215-265)||(42169126-42169176)
chr4 (199-245)||(46434098-46434144)
chr4 (251-316)||(21586965-21587030)
chr4 (215-272)||(34226402-34226459)
chr4 (252-333)||(39533767-39533848)
chr4 (289-349)||(8826779-8826839)
chr4 (286-334)||(19150672-19150720)
chr4 (254-330)||(19878300-19878376)
chr4 (215-311)||(20114096-20114192)
chr4 (251-331)||(31262641-31262721)
chr4 (285-333)||(39993123-39993171)
chr4 (229-337)||(41459439-41459547)
chr4 (251-331)||(46518467-46518547)
[»] chr8 (66 HSPs)
chr8 (215-349)||(5031463-5031597)
chr8 (199-333)||(16448788-16448922)
chr8 (215-349)||(35149683-35149817)
chr8 (215-349)||(42122981-42123117)
chr8 (205-334)||(8793733-8793862)
chr8 (199-349)||(3236331-3236479)
chr8 (199-334)||(8803242-8803377)
chr8 (199-334)||(40483282-40483417)
chr8 (215-340)||(8453610-8453734)
chr8 (225-349)||(10184576-10184700)
chr8 (215-334)||(7693048-7693167)
chr8 (206-334)||(10839777-10839904)
chr8 (199-349)||(15726759-15726908)
chr8 (197-334)||(43332574-43332712)
chr8 (215-330)||(16008538-16008653)
chr8 (215-337)||(32597513-32597635)
chr8 (215-334)||(24618973-24619091)
chr8 (233-337)||(34711092-34711196)
chr8 (199-334)||(6899434-6899568)
chr8 (229-334)||(1223137-1223242)
chr8 (199-340)||(12958784-12958924)
chr8 (199-334)||(44796356-44796490)
chr8 (228-334)||(15720213-15720319)
chr8 (199-352)||(36366024-36366176)
chr8 (226-311)||(36191773-36191856)
chr8 (199-296)||(40651275-40651370)
chr8 (218-334)||(35011226-35011341)
chr8 (235-334)||(883653-883752)
chr8 (199-334)||(22429549-22429683)
chr8 (217-331)||(43932066-43932180)
chr8 (209-334)||(24915179-24915303)
chr8 (218-334)||(24177986-24178101)
chr8 (197-337)||(42786375-42786513)
chr8 (215-334)||(6354663-6354781)
chr8 (199-334)||(10839762-10839896)
chr8 (215-290)||(24821906-24821981)
chr8 (199-343)||(5031463-5031607)
chr8 (206-334)||(7693047-7693175)
chr8 (252-296)||(30255785-30255829)
chr8 (215-334)||(8793734-8793853)
chr8 (241-331)||(5888349-5888439)
chr8 (242-313)||(27789314-27789385)
chr8 (250-340)||(30924710-30924801)
chr8 (240-311)||(39756400-39756471)
chr8 (217-331)||(13831892-13832006)
chr8 (199-334)||(32575185-32575323)
chr8 (217-331)||(35583900-35584014)
chr8 (199-320)||(10184579-10184700)
chr8 (217-330)||(45372723-45372836)
chr8 (199-331)||(29690453-29690585)
chr8 (242-313)||(13964457-13964528)
chr8 (252-331)||(17871776-17871855)
chr8 (252-331)||(26998717-26998796)
chr8 (280-331)||(35794606-35794657)
chr8 (261-334)||(4156394-4156468)
chr8 (237-334)||(13831398-13831495)
chr8 (230-308)||(28872156-28872234)
chr8 (217-331)||(34604798-34604912)
chr8 (274-340)||(43295071-43295137)
chr8 (300-349)||(8803328-8803377)
chr8 (230-331)||(24418907-24419007)
chr8 (236-313)||(24478460-24478537)
chr8 (235-312)||(29358647-29358724)
chr8 (258-311)||(32272678-32272731)
chr8 (236-316)||(6189662-6189742)
chr8 (217-265)||(24599686-24599734)
[»] chr2 (102 HSPs)
chr2 (215-333)||(32457228-32457346)
chr2 (199-334)||(7943438-7943574)
chr2 (199-334)||(11030191-11030326)
chr2 (199-334)||(38982998-38983133)
chr2 (215-357)||(30758735-30758876)
chr2 (215-343)||(33824355-33824483)
chr2 (217-349)||(41153128-41153260)
chr2 (215-334)||(35728479-35728599)
chr2 (215-334)||(10204941-10205059)
chr2 (215-342)||(29988898-29989025)
chr2 (215-337)||(12962716-12962838)
chr2 (199-334)||(20555272-20555406)
chr2 (199-334)||(30761392-30761527)
chr2 (215-330)||(39445013-39445128)
chr2 (215-334)||(28248948-28249067)
chr2 (199-337)||(9152378-9152516)
chr2 (215-349)||(12873722-12873856)
chr2 (215-335)||(29169850-29169970)
chr2 (215-334)||(4410792-4410912)
chr2 (202-334)||(5109377-5109509)
chr2 (215-334)||(38554473-38554592)
chr2 (199-334)||(43713973-43714107)
chr2 (199-324)||(28014297-28014422)
chr2 (199-334)||(34447503-34447637)
chr2 (215-349)||(42698079-42698213)
chr2 (224-340)||(5281202-5281317)
chr2 (215-295)||(28494757-28494837)
chr2 (199-351)||(45571027-45571178)
chr2 (199-351)||(45574694-45574845)
chr2 (199-351)||(45578361-45578512)
chr2 (199-351)||(45582028-45582179)
chr2 (199-351)||(45585695-45585846)
chr2 (199-351)||(45589362-45589513)
chr2 (199-351)||(45593029-45593180)
chr2 (199-351)||(45596696-45596847)
chr2 (199-351)||(45600363-45600514)
chr2 (199-351)||(45604030-45604181)
chr2 (199-351)||(45607697-45607848)
chr2 (199-351)||(45611364-45611515)
chr2 (199-351)||(45615031-45615182)
chr2 (199-334)||(11794463-11794598)
chr2 (210-313)||(39118049-39118152)
chr2 (215-333)||(33273985-33274103)
chr2 (215-334)||(36881547-36881660)
chr2 (218-313)||(3837428-3837523)
chr2 (199-334)||(3838417-3838551)
chr2 (199-334)||(45034412-45034546)
chr2 (218-324)||(11182183-11182289)
chr2 (215-331)||(22333540-22333656)
chr2 (199-334)||(4063286-4063420)
chr2 (215-286)||(32487052-32487123)
chr2 (218-334)||(4044593-4044708)
chr2 (215-313)||(2936328-2936426)
chr2 (199-333)||(15384442-15384575)
chr2 (221-315)||(37670351-37670445)
chr2 (215-331)||(41153128-41153244)
chr2 (202-265)||(5559596-5559659)
chr2 (258-349)||(7833281-7833372)
chr2 (286-334)||(5559377-5559425)
chr2 (228-315)||(920448-920534)
chr2 (199-334)||(9152393-9152528)
chr2 (215-334)||(12486006-12486125)
chr2 (199-334)||(12962704-12962839)
chr2 (215-334)||(32457227-32457346)
chr2 (199-345)||(7833281-7833427)
chr2 (215-349)||(11030191-11030325)
chr2 (217-331)||(3365292-3365406)
chr2 (199-349)||(7943438-7943589)
chr2 (217-331)||(6971587-6971701)
chr2 (199-349)||(41205489-41205639)
chr2 (205-346)||(5109368-5109509)
chr2 (119-180)||(12226317-12226378)
chr2 (233-334)||(32750356-32750457)
chr2 (282-342)||(27306717-27306777)
chr2 (205-349)||(40430665-40430809)
chr2 (235-315)||(3037756-3037838)
chr2 (215-334)||(7765808-7765927)
chr2 (199-334)||(12485992-12486126)
chr2 (258-337)||(20427059-20427138)
chr2 (236-331)||(23377974-23378069)
chr2 (230-349)||(28014303-28014422)
chr2 (215-334)||(28248947-28249066)
chr2 (215-339)||(43135041-43135156)
chr2 (199-349)||(44736777-44736928)
chr2 (258-324)||(6458593-6458658)
chr2 (215-345)||(10204942-10205071)
chr2 (251-313)||(14803068-14803130)
chr2 (254-331)||(1961359-1961436)
chr2 (254-331)||(15119790-15119867)
chr2 (217-342)||(22333531-22333656)
chr2 (221-262)||(29060239-29060280)
chr2 (233-334)||(45065594-45065695)
chr2 (199-315)||(6761464-6761580)
chr2 (277-333)||(13021716-13021772)
chr2 (217-313)||(15492707-15492802)
chr2 (251-331)||(23143533-23143613)
chr2 (251-331)||(23555323-23555403)
chr2 (215-343)||(30758725-30758852)
chr2 (243-331)||(31570997-31571085)
chr2 (217-265)||(33727075-33727122)
chr2 (226-322)||(41823763-41823859)
chr2 (243-315)||(44587682-44587754)
[»] chr3 (63 HSPs)
chr3 (215-349)||(54537442-54537576)
chr3 (215-343)||(44518041-44518169)
chr3 (215-335)||(52864964-52865084)
chr3 (199-334)||(21662900-21663035)
chr3 (215-339)||(43448967-43449091)
chr3 (215-334)||(45010765-45010884)
chr3 (208-334)||(23222966-23223091)
chr3 (199-351)||(53441906-53442058)
chr3 (215-334)||(36985170-36985289)
chr3 (215-334)||(37010609-37010728)
chr3 (215-313)||(25954037-25954135)
chr3 (208-340)||(9236094-9236227)
chr3 (199-351)||(51516955-51517106)
chr3 (215-334)||(35099070-35099189)
chr3 (199-320)||(8266261-8266380)
chr3 (220-334)||(12747717-12747831)
chr3 (199-332)||(12064908-12065041)
chr3 (215-334)||(19649594-19649713)
chr3 (199-334)||(29457839-29457973)
chr3 (215-340)||(43343449-43343579)
chr3 (218-351)||(49885376-49885508)
chr3 (215-283)||(9197096-9197164)
chr3 (215-334)||(20028486-20028603)
chr3 (223-342)||(51723384-51723503)
chr3 (246-358)||(40460335-40460448)
chr3 (199-337)||(21662885-21663023)
chr3 (233-334)||(53357321-53357423)
chr3 (215-308)||(13622502-13622595)
chr3 (215-331)||(25910206-25910322)
chr3 (199-334)||(28406466-28406601)
chr3 (233-315)||(32711235-32711317)
chr3 (221-317)||(2544489-2544586)
chr3 (215-335)||(19649592-19649712)
chr3 (205-349)||(33371860-33372003)
chr3 (215-343)||(33808325-33808452)
chr3 (235-315)||(48593175-48593255)
chr3 (271-333)||(16295401-16295463)
chr3 (202-337)||(40198406-40198541)
chr3 (217-331)||(44118200-44118314)
chr3 (205-259)||(50354325-50354379)
chr3 (224-337)||(8987740-8987853)
chr3 (259-332)||(47505231-47505304)
chr3 (197-334)||(53441921-53442058)
chr3 (286-334)||(5177851-5177899)
chr3 (236-332)||(29290794-29290890)
chr3 (210-346)||(40198405-40198541)
chr3 (258-349)||(9190086-9190177)
chr3 (215-279)||(16295648-16295716)
chr3 (216-315)||(29290794-29290892)
chr3 (215-334)||(44518051-44518170)
chr3 (246-340)||(47977930-47978024)
chr3 (215-334)||(51723393-51723512)
chr3 (233-315)||(32711235-32711317)
chr3 (219-272)||(23920678-23920731)
chr3 (254-323)||(54783398-54783467)
chr3 (199-337)||(8243693-8243831)
chr3 (258-312)||(29222835-29222889)
chr3 (217-331)||(43901598-43901712)
chr3 (217-331)||(45113751-45113865)
chr3 (277-334)||(9197095-9197152)
chr3 (230-335)||(55139203-55139308)
chr3 (254-330)||(4181945-4182021)
chr3 (255-331)||(52215931-52216007)
[»] chr6 (52 HSPs)
chr6 (215-337)||(30627834-30627956)
chr6 (215-343)||(17265736-17265864)
chr6 (199-334)||(3064897-3065032)
chr6 (214-333)||(12450366-12450485)
chr6 (215-334)||(28630767-28630886)
chr6 (204-296)||(9077638-9077730)
chr6 (216-337)||(2972175-2972296)
chr6 (199-334)||(8052869-8053005)
chr6 (215-334)||(33119919-33120036)
chr6 (215-334)||(10283309-10283428)
chr6 (215-349)||(12999770-12999905)
chr6 (233-334)||(2230382-2230483)
chr6 (210-342)||(30895190-30895322)
chr6 (197-315)||(27909007-27909126)
chr6 (215-331)||(28863337-28863453)
chr6 (199-349)||(2810078-2810227)
chr6 (206-333)||(12450357-12450484)
chr6 (218-351)||(1836978-1837110)
chr6 (218-360)||(8646697-8646838)
chr6 (208-337)||(7649810-7649941)
chr6 (206-334)||(28630759-28630887)
chr6 (228-334)||(1158273-1158379)
chr6 (215-320)||(1158273-1158378)
chr6 (243-315)||(24985975-24986047)
chr6 (199-330)||(29168476-29168611)
chr6 (215-296)||(2937095-2937175)
chr6 (215-315)||(5483876-5483976)
chr6 (217-349)||(30438742-30438874)
chr6 (206-249)||(25538047-25538090)
chr6 (206-332)||(2972170-2972296)
chr6 (215-273)||(21162415-21162473)
chr6 (223-313)||(3046652-3046738)
chr6 (208-313)||(7649807-7649912)
chr6 (236-309)||(15836574-15836647)
chr6 (242-331)||(16121003-16121092)
chr6 (268-345)||(17705930-17706007)
chr6 (205-334)||(30627828-30627957)
chr6 (299-339)||(2937089-2937129)
chr6 (236-312)||(33053797-33053873)
chr6 (199-318)||(6047826-6047945)
chr6 (224-339)||(7257354-7257469)
chr6 (236-331)||(13281566-13281661)
chr6 (217-331)||(12605627-12605741)
chr6 (233-331)||(16120978-16121076)
chr6 (299-337)||(25538047-25538085)
chr6 (217-331)||(28605587-28605701)
chr6 (221-334)||(5483875-5483988)
chr6 (251-312)||(7158303-7158364)
chr6 (215-340)||(17265729-17265854)
chr6 (258-334)||(6045695-6045771)
chr6 (217-349)||(10145232-10145364)
chr6 (199-263)||(33119987-33120051)
[»] scaffold0136 (1 HSPs)
scaffold0136 (208-336)||(16541-16669)
[»] scaffold0110 (2 HSPs)
scaffold0110 (199-337)||(1532-1669)
scaffold0110 (199-264)||(1616-1681)
[»] scaffold0123 (2 HSPs)
scaffold0123 (209-330)||(28096-28219)
scaffold0123 (197-334)||(29241-29378)
[»] scaffold0236 (1 HSPs)
scaffold0236 (228-334)||(16679-16782)
[»] scaffold0086 (1 HSPs)
scaffold0086 (228-296)||(1489-1556)
[»] scaffold0001 (1 HSPs)
scaffold0001 (199-334)||(156767-156902)
[»] scaffold0070 (1 HSPs)
scaffold0070 (224-334)||(40159-40270)
[»] scaffold0767 (2 HSPs)
scaffold0767 (269-337)||(3734-3802)
scaffold0767 (202-255)||(5288-5341)
[»] scaffold0242 (1 HSPs)
scaffold0242 (235-334)||(16521-16619)
[»] scaffold0238 (1 HSPs)
scaffold0238 (243-313)||(2539-2609)
[»] scaffold0778 (1 HSPs)
scaffold0778 (215-311)||(5287-5382)
[»] scaffold0028 (2 HSPs)
scaffold0028 (215-349)||(71864-71999)
scaffold0028 (299-349)||(71848-71898)
[»] scaffold0065 (1 HSPs)
scaffold0065 (252-316)||(36882-36946)
[»] scaffold0023 (1 HSPs)
scaffold0023 (217-329)||(112840-112952)
[»] scaffold0002 (1 HSPs)
scaffold0002 (230-337)||(423259-423366)
[»] scaffold0018 (1 HSPs)
scaffold0018 (258-315)||(135830-135887)
[»] scaffold1786 (1 HSPs)
scaffold1786 (254-322)||(532-600)
[»] scaffold0009 (1 HSPs)
scaffold0009 (236-312)||(146000-146076)


Alignment Details
Target: chr5 (Bit Score: 136; Significance: 7e-71; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 14221726 - 14221861
Alignment:
Q  24 tttttgttgtactatttattttatcttttatttgatatgtttaagatttatcgagtgaacatcattcggtggtgtttaggatttaaaaattaatattttt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14221726 tttttgttgtactatttattttatcttttatttgatatgtttaagatttatcgagtgaacatcattcggtggtgtttaggatttaaaaattaatattttt 14221825  T
Q  124 gtgtatggtacaaaactgaccttttcactattaatt 159  Q
    ||||||||||||||||||||||||||||||||||||    
T  14221826 gtgtatggtacaaaactgaccttttcactattaatt 14221861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 204 - 334
Target Start/End: Original strand, 5002144 - 5002274
Alignment:
Q  204 cctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatg 303  Q
    |||||||||  |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||     
T  5002144 cctccggtcctatttataagaaacatttgacttttttgattaattgcataaatgatgtatttgatctatattttagacaagatacatcaattactcaata 5002243  T
Q  304 aatctaaaaagttaaatttttcttataaata 334  Q
    |||||||||||| ||| ||||||||||||||    
T  5002244 aatctaaaaagtaaaaattttcttataaata 5002274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 215 - 334
Target Start/End: Complemental strand, 18473608 - 18473489
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18473608 atttataagaaacatttgacttttttgattcattgtataaatgatgcatttgatctatattctagacaagatacatcaattactcaatgaatctaaaaag 18473509  T
Q  315 ttaaatttttcttataaata 334  Q
    | |||||| ||| |||||||    
T  18473508 tcaaatttctctcataaata 18473489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 215 - 335
Target Start/End: Complemental strand, 22102041 - 22101921
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||| |||||||||||||| |||||  |||||||||||||||     
T  22102041 atttataagaaatatttgacttttttgatttattgtataaataatgtatttgatctatattttagacaagatacattaattacacaatgaatctaaaaaa 22101942  T
Q  315 ttaaatttttcttataaataa 335  Q
    | |||||||||||||||||||    
T  22101941 tcaaatttttcttataaataa 22101921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 206 - 349
Target Start/End: Original strand, 34297180 - 34297326
Alignment:
Q  206 tccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaa 305  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||| |||||||||| | ||||||    
T  34297180 tccggtcttatttataagaaatatttgacttttttaattcattgcataaatgatgtaattgatctatattttagacaagacacatcaattacttaatgaa 34297279  T
Q  306 tctaaaaagttaa---atttttcttataaataagatcgaaggaagta 349  Q
    |||||||||| ||   |||||| ||||||||| ||||| ||| ||||    
T  34297280 tctaaaaagtcaatttattttttttataaataggatcggagggagta 34297326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 199 - 324
Target Start/End: Complemental strand, 33478256 - 33478131
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||||||| ||||||| |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||| |    
T  33478256 tactccctccggtcctatttataagaaacatttgacatttttgattcattgcataaatgatgtatttggcctatattctagacgagatacatcaattact 33478157  T
Q  299 caatgaatctaaaaagttaaattttt 324  Q
    ||||||||||||||| | ||||||||    
T  33478156 caatgaatctaaaaattcaaattttt 33478131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 215 - 353
Target Start/End: Complemental strand, 38394561 - 38394423
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||| |||| |||||| || |  ||||| ||||| |||||||||||||||||    
T  38394561 atttataagaaacattttacttttttgattcattgcataaatgatgtatttggtctacattctataccaagtacattaattattcaatgaatctaaaaag 38394462  T
Q  315 ttaaatttttcttataaataagatcgaaggaagtagtag 353  Q
    | || ||||||||||||||| ||||| ||| ||||||||    
T  38394461 tcaattttttcttataaataggatcggagggagtagtag 38394423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 200 - 337
Target Start/End: Complemental strand, 16619166 - 16619028
Alignment:
Q  200 acttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatc 299  Q
    |||| ||||||||  |||||||||||||| ||||| ||||||||| |||||||||||||| |||||| ||| ||||||||||| ||||||||||||| ||    
T  16619166 acttgctccggtcatatttataagaaatagttgacgtttttgatttattgcataaatgatatatttggtctctattctagacatgatacatcaattactc 16619067  T
Q  300 aatgaatcta-aaaagttaaatttttcttataaataaga 337  Q
    || ||||||| |||| | |||||||||||||||||||||    
T  16619066 aacgaatctaaaaaaatcaaatttttcttataaataaga 16619028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 215 - 349
Target Start/End: Original strand, 21488298 - 21488432
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||| |||||| |||||   ||||| | ||||||     
T  21488298 atttataagaaatatttgacttttttaattcattgcataaataatgtatttggtctatattctagacaaaatacattaattacataatgagtttaaaaaa 21488397  T
Q  315 ttaaatttttcttataaataagatcgaaggaagta 349  Q
    |||| ||||||||||||||| ||||| ||| ||||    
T  21488398 ttaactttttcttataaataggatcggagggagta 21488432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 29299507 - 29299371
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttga-ttcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaa 297  Q
    |||| |||||||||  | |||||||||| ||||||||||||||| ||||||| |||||||||||||| | |||||||| ||||||| |||||||||| |     
T  29299507 tactccctccggtcctagttataagaaacatttgacttttttgaattcattgtataaatgatgtattcggtctatattttagacaaaatacatcaatcac 29299408  T
Q  298 tcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    |||||||||||||||| | ||||||||||||||||||    
T  29299407 tcaatgaatctaaaaaatcaaatttttcttataaata 29299371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 215 - 315
Target Start/End: Original strand, 36286074 - 36286174
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||| ||||| |||||||||||    
T  36286074 atttataagaaatacttgatttttttgattcattgcataaatgatgtagttggtctatattctagacatgatacatcaattactcaattaatctaaaaag 36286173  T
Q  315 t 315  Q
    |    
T  36286174 t 36286174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 13789731 - 13789866
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||||||| |||| |||||||||||||||||||||||||||||||||| |||| |||||| || |  ||||| ||||| |    
T  13789731 tactccctccggtcctatttataagaaacattttacttttttgattcattgcataaatgatgtatttggtctacattctataccaagtacattaattatt 13789830  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    |||||||||| |||||| || |||||||||||||||    
T  13789831 caatgaatctgaaaagtcaactttttcttataaata 13789866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 36434706 - 36434813
Alignment:
Q  228 atttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttctt 327  Q
    |||||| |||||| ||||||| |||||||||| |||||| | |||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  36434706 atttgattttttttattcattacataaatgatatatttggtttatattttagacaagatacatcaattacttaatgaatctaaaaagttaaatttttctt 36434805  T
Q  328 ataaataa 335  Q
    ||||||||    
T  36434806 ataaataa 36434813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 218 - 312
Target Start/End: Original strand, 919660 - 919754
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaa 312  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||| ||||||||||| || |||||||||||||| |||||||||||||||    
T  919660 tataggaaatatttgacttttttgattcattcaataaatgatgtatttggtctatattctatactagatacatcaattactcaatgaatctaaaa 919754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 199 - 324
Target Start/End: Complemental strand, 10228216 - 10228087
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtat----ttgatctatattctagacaagatacatcaat 294  Q
    |||| |||||||||| |||||| ||||| |||||||||||||||||||||| |||||||||||||    |  || |||||||||||||||||||||||||    
T  10228216 tactccctccggtcttatttattagaaacatttgacttttttgattcattgtataaatgatgtatctcgtctatatatattctagacaagatacatcaat 10228117  T
Q  295 taatcaatgaatctaaaaagttaaattttt 324  Q
    |  ||||| ||||||||||||||| |||||    
T  10228116 tgttcaataaatctaaaaagttaatttttt 10228087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 11932119 - 11931983
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||||||||||||  ||||| |||||| |||| | |||||||||| |||  |||||||||||||||| |||||||| |||||||||||||| |||||      
T  11932119 tacttcctccggtcctatttaaaagaaacatttaatttttttgatttattatataaatgatgtatttggtctatattttagacaagatacattaattaca 11932020  T
Q  299 caatgaatctaaaaagttaa-atttttcttataaata 334  Q
    ||||||||||||||||| ||  |||||||||||||||    
T  11932019 caatgaatctaaaaagtcaatttttttcttataaata 11931983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 13664945 - 13665073
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||||| |||||||  |||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||| ||||    |||| |    
T  13664945 tacttcatccggtcatatttataagaaacatttgacttttttaattaattgcataaatgatgtatttgatctatattctaaacaacatac----attact 13665040  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||||   |||| ||||| ||||||||||||    
T  13665041 caatgaatct---aagtcaaattgttcttataaata 13665073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 29031036 - 29031170
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||| || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||||||||  |    
T  29031036 tactccctccggtcttatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattgtt 29031134  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
     ||||||||||||||||||| |||||||||||||||    
T  29031135 gaatgaatctaaaaagttaactttttcttataaata 29031170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 235 - 334
Target Start/End: Complemental strand, 18718354 - 18718252
Alignment:
Q  235 ttttttgattcattgcataaatgatgtatt---tgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    |||||||||| |||||||||||||| ||||   || ||||||||||||||||||||||| ||||| ||||| ||| ||||| ||||||||||||||||||    
T  18718354 ttttttgatttattgcataaatgatatattatttggtctatattctagacaagatacattaattactcaataaatttaaaatgttaaatttttcttataa 18718255  T
Q  332 ata 334  Q
    |||    
T  18718254 ata 18718252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 349
Target Start/End: Complemental strand, 38362499 - 38362378
Alignment:
Q  227 tatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttct 326  Q
    ||||| |||||||| |||||||||||||| ||| |||||  |||||||| |||| ||||||||||||||  ||| | |||||||||||||||| ||||||    
T  38362499 tatttaactttttt-attcattgcataaacgatatatttagtctatattttagataagatacatcaatttttcagttaatctaaaaagttaaaattttct 38362401  T
Q  327 tataaataagatcgaaggaagta 349  Q
    |||||||| || |||||| ||||    
T  38362400 tataaatatgaccgaaggtagta 38362378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 215 - 299
Target Start/End: Complemental strand, 1248963 - 1248878
Alignment:
Q  215 atttataagaaatatttgacttttttg-attcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatc 299  Q
    |||||||||||| |||| ||||||||  |||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1248963 atttataagaaacatttaacttttttttattcatttgataaatgatgtatttgatctatattctagacaagatacatcaatgaatc 1248878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 15968440 - 15968325
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | |||||||| ||||| | |||||||||||||| |||    
T  15968440 tataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctagatacattaattattgaatgaatctaaaaaatta 15968342  T
Q  318 aatttttcttataaata 334  Q
    | |||||||||||||||    
T  15968341 actttttcttataaata 15968325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 228 - 295
Target Start/End: Original strand, 18391526 - 18391593
Alignment:
Q  228 atttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaatt 295  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||| ||||    
T  18391526 atttgacttttttgattcattgcataaataatgtatttgatctatattataaacaagatacattaatt 18391593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 22731258 - 22731392
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||| ||||| |    
T  22731258 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacattaattatt 22731356  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
     |||||||||||||| |||| |||||||||||||||    
T  22731357 taatgaatctaaaaaattaactttttcttataaata 22731392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 334
Target Start/End: Complemental strand, 27488489 - 27488361
Alignment:
Q  205 ctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatga 304  Q
    ||||||||  || ||||||||| | || ||||||||||||||||  |||  |||| |||||| ||||| |||||| | |||||||||||||| | |||||    
T  27488489 ctccggtcctatatataagaaacaatttacttttttgattcattcaatagttgatatatttggtctat-ttctaggctagatacatcaattattgaatga 27488391  T
Q  305 atctaaaaagttaaatttttcttataaata 334  Q
    ||||||||| |||| |||||||||||||||    
T  27488390 atctaaaaaattaattttttcttataaata 27488361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 234 - 334
Target Start/End: Complemental strand, 39239909 - 39239808
Alignment:
Q  234 cttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaa-atttttcttataaa 332  Q
    ||||||| ||||||||||||||| || |||||||||||||||| | ||||||||||| |||||  ||||||||||||||||  ||  |||||||||||||    
T  39239909 ctttttttattcattgcataaataatatatttgatctatattcaatacaagatacattaattacacaatgaatctaaaaagacaatttttttcttataaa 39239810  T
Q  333 ta 334  Q
    ||    
T  39239809 ta 39239808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 205 - 349
Target Start/End: Original strand, 1138223 - 1138366
Alignment:
Q  205 ctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatga 304  Q
    ||||||||  |||||||||||| | || |||||||||||| |||| |||| | ||||||||| ||||| |||||| | |||||||| ||||| | |||||    
T  1138223 ctccggtcctatttataagaaacaatttacttttttgatttattgaataattaatgtatttggtctat-ttctagtctagatacattaattatttaatga 1138321  T
Q  305 atctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    || |||||| | || ||||||||||||||| ||||| ||| ||||    
T  1138322 atttaaaaaatcaattttttcttataaatatgatcggagggagta 1138366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 223 - 315
Target Start/End: Original strand, 32452252 - 32452343
Alignment:
Q  223 gaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    |||| ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||||| ||||| |||||  |||||||| ||||||||    
T  32452252 gaaacatttgactttt-tgattcattgcataaatattgtatttggtctatattctagacaagctacattaattacgcaatgaatataaaaagt 32452343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 197 - 349
Target Start/End: Original strand, 38394425 - 38394577
Alignment:
Q  197 actacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaatta 296  Q
    |||||| |||||| ||  |||||||||||| | |||||||||| ||||||||| |||| | ||||| ||| | || | | ||||| | |||||||| |||    
T  38394425 actactccctccgatcctatttataagaaaaaattgactttttagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcattta 38394524  T
Q  297 atcaatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
      ||||||||| ||||||| |||| ||||||||||||| ||||||||| ||||    
T  38394525 tgcaatgaatcaaaaaagtaaaatgtttcttataaataggatcgaagggagta 38394577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 1015155 - 1015289
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||    || |||||| |||| |    
T  1015155 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaagttaggtacatcgattatt 1015253  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
     ||||||||||||||||||| |||||||||||||||    
T  1015254 gaatgaatctaaaaagttaactttttcttataaata 1015289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 251 - 344
Target Start/End: Original strand, 8235428 - 8235521
Alignment:
Q  251 ataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataagatcgaagg 344  Q
    |||||||||||||||||| |||||| ||||| | ||| || ||||| ||||| |||||||||| | || |||||||||||||||| ||||||||    
T  8235428 ataaatgatgtatttgatttatattatagaccaaatatattaattattcaataaatctaaaaaatcaattttttcttataaataaaatcgaagg 8235521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 337
Target Start/End: Complemental strand, 26327665 - 26327546
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    ||||||||| | || |||||||||||| |||| |||  ||||||||||| ||||| || ||||  || ||||||||||| | ||||||||||||||||||    
T  26327665 tataagaaagaatttacttttttgatttattgaatagttgatgtatttggtctatttt-tagattaggtacatcaattattgaatgaatctaaaaagtta 26327567  T
Q  318 a-atttttcttataaataaga 337  Q
    |  ||||||||||||||||||    
T  26327566 atttttttcttataaataaga 26327546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 215 - 337
Target Start/End: Original strand, 3813985 - 3814108
Alignment:
Q  215 atttataagaaatatttgacttttttg-attcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    |||||||| ||| |||||| ||||||  ||| ||||||||||| ||||||||  ||||||||||| || |  ||||| ||||| |||| |||||||||||    
T  3813985 atttataaaaaacatttgatttttttttatttattgcataaataatgtatttagtctatattctataccaagtacattaattattcaacgaatctaaaaa 3814084  T
Q  314 gttaaatttttcttataaataaga 337  Q
    || || ||||||||||||| ||||    
T  3814085 gtcaattttttcttataaacaaga 3814108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 333
Target Start/End: Original strand, 10495206 - 10495340
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||||||||||||| ||||||||| ||  ||||| ||||| ||||||||  ||||||||||||| || | |||||| ||||  | || ||||| ||| |    
T  10495206 tacttcctccggtcttatttataagtaaattttgattttttagattcattcaataaatgatgtatgtggtttatattatagatcacattcatcatttatt 10495305  T
Q  299 caatgaatctaaaaagttaaatttttcttataaat 333  Q
    |||||||  |||||||| ||| ||| |||||||||    
T  10495306 caatgaacttaaaaagtgaaaatttacttataaat 10495340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 208 - 349
Target Start/End: Complemental strand, 10495347 - 10495206
Alignment:
Q  208 cggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatc 307  Q
    |||||| ||||||||| ||  ||| |||||||   ||||||| |||||||||| || ||||||||| | || || | |||||||| ||| | ||||||||    
T  10495347 cggtctcatttataagtaaattttcactttttaagttcattgaataaatgatgaatgtgatctataatataaaccacatacatcatttattgaatgaatc 10495248  T
Q  308 taaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    |||||| | ||| ||| ||||||||||||| || ||||||||    
T  10495247 taaaaaatcaaaatttacttataaataagaccggaggaagta 10495206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 340
Target Start/End: Original strand, 14913141 - 14913246
Alignment:
Q  235 ttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    |||||||||||||||| | ||| ||||||||| |||||||| || |  | ||| || ||||| ||||||||| |||||| | ||||||||||||||||||    
T  14913141 ttttttgattcattgcctgaataatgtatttggtctatattttatatcaaatatattaattactcaatgaatttaaaaaatcaaatttttcttataaata 14913240  T
Q  335 agatcg 340  Q
     |||||    
T  14913241 ggatcg 14913246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 215 - 331
Target Start/End: Original strand, 19295972 - 19296089
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatg-tatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    ||||||||||||  ||||| ||||||||||||||| |||||||||| |||||| | ||| ||||| || |  ||||| | ||| ||||||||||||||||    
T  19295972 atttataagaaacgtttgatttttttgattcattggataaatgatgttatttggtatatcttctataccaagtacattagttactcaatgaatctaaaaa 19296071  T
Q  314 gttaaatttttcttataa 331  Q
    || || ||||| ||||||    
T  19296072 gtcaacttttttttataa 19296089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 341
Target Start/End: Original strand, 8511460 - 8511524
Alignment:
Q  277 tagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataagatcga 341  Q
    |||||||||||| ||||||| |||||||||||||||||| ||| ||||||| |||||| ||||||    
T  8511460 tagacaagatacgtcaattactcaatgaatctaaaaagtcaaaattttcttctaaataggatcga 8511524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 14221864 - 14221920
Alignment:
Q  219 ataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatatt 275  Q
    |||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||||    
T  14221864 ataagaaacatttgacttttttgattaattgcataaatgatatatttgatttatatt 14221920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 258 - 324
Target Start/End: Complemental strand, 14723476 - 14723410
Alignment:
Q  258 atgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaattttt 324  Q
    ||||||||| |||||||||||||  ||||| |||||||| ||||||||| ||||||||||| |||||    
T  14723476 atgtatttggtctatattctagattagatatatcaattactcaatgaatttaaaaagttaatttttt 14723410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 241 - 343
Target Start/End: Complemental strand, 36409741 - 36409639
Alignment:
Q  241 gattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataagatcg 340  Q
    ||||||||| ||||||||||||| |||| |||  | ||||| | ||| |||| ||| ||||| |||||||||||||||| ||| ||||||||| ||| ||    
T  36409741 gattcattgaataaatgatgtatgtgatatatgatatagaccacatatatcatttattcaataaatctaaaaagttaaaatttacttataaatgagaccg 36409642  T
Q  341 aag 343  Q
    |||    
T  36409641 aag 36409639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 330
Target Start/End: Original strand, 29874335 - 29874447
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    ||||||||| | |||||||||||| |||||||  ||| |||||||| |  |||||||| |  | || |||||| ||||| || ||||| |||||||||||    
T  29874335 tataagaaacaattgacttttttggttcattgtttaagtgatgtatctagtctatatttttaataaaatacattaattattctatgaacctaaaaagtta 29874434  T
Q  318 aatttttcttata 330  Q
    | |||||||||||    
T  29874435 actttttcttata 29874447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 331
Target Start/End: Complemental strand, 3100513 - 3100418
Alignment:
Q  236 tttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    |||| ||||||||  || |||||||||| |||||| |||| ||||| | |||||||| ||| | ||||||||||||| ||||| |||| |||||||    
T  3100513 ttttagattcattcaattaatgatgtatatgatctttattatagactacatacatcatttattgaatgaatctaaaatgttaatttttgcttataa 3100418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 334
Target Start/End: Complemental strand, 13789865 - 13789746
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| | |||||||||  ||||||||| |||| | ||||| ||| | || | | ||||| | |||||||| |||  ||||||||| ||||||    
T  13789865 atttataagaaaaagttgacttttcagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcatttatgcaatgaatcaaaaaag 13789766  T
Q  315 ttaaatttttcttataaata 334  Q
    | |||| |||||||||||||    
T  13789765 taaaatgtttcttataaata 13789746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 252 - 331
Target Start/End: Complemental strand, 25694207 - 25694128
Alignment:
Q  252 taaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||||||||||||| |||||||| | ||||| |||||||| ||||| |||||| ||| |||||| | |||| |||||||    
T  25694207 taaatgatgtatttggtctatattattgacaaaatacatcatttaatgaatgaacctagaaagttgatttttgcttataa 25694128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 349
Target Start/End: Original strand, 22398126 - 22398190
Alignment:
Q  285 atacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    |||||| ||||| |||||||||||||||||||  |||||  ||||||||| ||||||| ||||||    
T  22398126 atacattaattattcaatgaatctaaaaagttgtattttatttataaatatgatcgaaagaagta 22398190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 25408651 - 25408575
Alignment:
Q  236 tttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaa 312  Q
    |||| ||||||||  ||||||||||||| || ||| |||| ||||||| |||||||| ||| | |||||||||||||    
T  25408651 ttttagattcattcaataaatgatgtatgtggtctttattgtagacaacatacatcatttattgaatgaatctaaaa 25408575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 12094253 - 12094371
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| | |  ||||||| |||| |||  |||  |||||||| || |||||||| ||||| ||||||| ||||||| ||||| || ||||||     
T  12094253 atttataagaaacaatcaactttttagatttattaaatagttgatgtatgtggtctatattttagaccagatacaacaattaaacaatg-atttaaaaaa 12094351  T
Q  315 ttaaatttttcttataaata 334  Q
    |||| | |||||||||||||    
T  12094352 ttaattgtttcttataaata 12094371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 325
Target Start/End: Complemental strand, 15969170 - 15969091
Alignment:
Q  246 attgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttc 325  Q
    |||| |||| |||||||| || |||||||| ||||  ||||| ||||| || |||||| |||||||||||||| ||||||    
T  15969170 attgaataactgatgtatatggtctatattatagatcagatatatcaagtattcaatgcatctaaaaagttaattttttc 15969091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 352
Target Start/End: Complemental strand, 27600889 - 27600755
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||||| |||| |||||||||||||||  ||| |||| ||| | |||||||||    | ||||||||| ||||| || |||||  ||||||| |    
T  27600889 ttataagaaataattgatttttttgattcattgtgtaagtgatttatctaatctatatttacaataagatacattaattattctatgaacttaaaaag-t 27600791  T
Q  317 aaatttttcttataaataagatcgaaggaagtagta 352  Q
     ||||||||||||||  |||| || ||| |||||||    
T  27600790 caatttttcttataataaagaccggagggagtagta 27600755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 199 - 349
Target Start/End: Complemental strand, 38393904 - 38393753
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||||||||||||   ||||| |||||| | ||||||||||  ||  |||| |||| | ||| ||||||| || ||||| ||| | |||||| ||||| |    
T  38393904 tacttcctccggttctatttacaagaaacaattgactttttaaatatattgaataatttatgaatttgatttagattcttgactatatacataaattatt 38393805  T
Q  299 caatgaatctaaaaagttaaatttttctt-ataaataagatcgaaggaagta 349  Q
    ||||| || | |||| |||| ||||| || ||||||||||||| ||||||||    
T  38393804 caatgtattttaaaaattaattttttttttataaataagatcggaggaagta 38393753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 331
Target Start/End: Original strand, 1098641 - 1098754
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    ||||||| || | |||||||||| ||||||||  ||||||||||||| || |||||| | ||||| | |||||| | ||| | |||||||||||||| |     
T  1098641 ttataagtaaaagttgactttttagattcattcaataaatgatgtatgtggtctata-tatagactacatacattatttattaaatgaatctaaaaaata 1098739  T
Q  317 aaatttttcttataa 331  Q
    || |||| |||||||    
T  1098740 aacttttgcttataa 1098754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 331
Target Start/End: Complemental strand, 13391642 - 13391544
Alignment:
Q  233 acttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||||| | ||||||  |||||| ||||||||  |||||||| | ||| | |||||||| ||| | ||||||||||||||||| | |||| |||||||    
T  13391642 actttttaggttcattcaataaattatgtatttagtctatattattgaccaaatacatcatttattgaatgaatctaaaaagttgacttttacttataa 13391544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 331
Target Start/End: Original strand, 13391560 - 13391658
Alignment:
Q  233 acttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||||| ||||||||  |||||||||||||||| || ||| | ||||| | |||||| | ||| | |||||| |||||||||| | |||| |||||||    
T  13391560 actttttagattcattcaataaatgatgtatttggtcaataatatagactaaatacataatttattgaatgaacctaaaaagttgatttttgcttataa 13391658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 332
Target Start/End: Original strand, 14338873 - 14338947
Alignment:
Q  258 atgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaa 332  Q
    ||||||||| | || ||||| ||  |||||||| ||||| |||||| |||||||||||||||||| |||| ||||    
T  14338873 atgtatttggtttaaattcttgaatagatacataaattattcaatgtatctaaaaagttaaatttctcttgtaaa 14338947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 331
Target Start/End: Complemental strand, 20502218 - 20502104
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| | || | ||||||| |||||||  ||| |||||||| |  ||||||||    | ||||||||| ||||| || |||||||||||||||     
T  20502218 ttataagaaacaattaatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaatctaaaaagtc 20502119  T
Q  317 aaatttttcttataa 331  Q
    || ||||||||||||    
T  20502118 aactttttcttataa 20502104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 331
Target Start/End: Original strand, 24173437 - 24173551
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||||| |||| ||||||  |||||||  ||| |||||||| | ||||||||| |  | ||||||||| ||||| || || ||  ||||||||     
T  24173437 ttataagaaataattgatttttttagttcattgtgtaagtgatgtatctaatctatattttcaataagatacattaattattctataaacttaaaaagtc 24173536  T
Q  317 aaatttttcttataa 331  Q
    || ||||||||||||    
T  24173537 aactttttcttataa 24173551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 331
Target Start/End: Original strand, 29002759 - 29002873
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| | |||||||||||| |||||||  ||| |||||||| |  |||||||| | || |||||| || ||||| || || || ||||||| |     
T  29002759 ttataagaaacaattgacttttttggttcattgtgtaagtgatgtatctagtctatattttcgataagatatattaattattccataaacctaaaaaatc 29002858  T
Q  317 aaatttttcttataa 331  Q
    || ||||||||||||    
T  29002859 aactttttcttataa 29002873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 32911560 - 32911498
Alignment:
Q  254 aatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    ||||||||||||  |||||||| ||||| | |||||||| ||||| |||||| ||||||||||    
T  32911560 aatgatgtatttagtctatattatagactaaatacatcatttaataaatgaacctaaaaagtt 32911498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 35349496 - 35349546
Alignment:
Q  283 agatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaat 333  Q
    |||||||||||||| |||||||||||||||||| || | ||| ||||||||    
T  35349496 agatacatcaattactcaatgaatctaaaaagtcaattattttttataaat 35349546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 331
Target Start/End: Original strand, 43506175 - 43506221
Alignment:
Q  285 atacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    |||||||| ||||| |||||||||||||||| ||||||| |||||||    
T  43506175 atacatcatttaatgaatgaatctaaaaagtgaaattttgcttataa 43506221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 7749976 - 7750069
Alignment:
Q  258 atgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagtagt 351  Q
    ||||||||| | || ||||| ||| ||||||||  |||| |||||| ||||||||||| || ||| |||| |||||| || ||||| |||||||    
T  7749976 atgtatttggtttagattcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttgtaaataggaccgaagaaagtagt 7750069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 331
Target Start/End: Original strand, 29299356 - 29299489
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||||||| |||||| ||||| |||||||||  | | ||||||||||  |||| | | |||||   |||||||| |||      
T  29299356 tactccctccggtcctatttataagaaaaatttgattttttagattcattgagtgattgatgtattttgtctaaaatatagaccgaatacatcatttata 29299455  T
Q  299 caatgaa-tctaaaaagttaaatttttcttataa 331  Q
    ||||||| || ||||||| |||| ||||||||||    
T  29299456 caatgaattcaaaaaagtcaaatgtttcttataa 29299489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 334
Target Start/End: Complemental strand, 21090466 - 21090390
Alignment:
Q  258 atgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||| | || ||||| ||| ||||||||  |||| |||||| |||||||||||||| ||| |||| ||||||    
T  21090466 atgtatttggtttagattcttgactagatacatacattattcaatgtatctaaaaagttaattttctcttgtaaata 21090390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 3e-58; HSPs: 92)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 199 - 349
Target Start/End: Original strand, 11668014 - 11668164
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11668014 tactccctccggtcctatttataagaaacatttgacttttttgattcattgcataaatgatatatttgatctatattctagacaagatacatcaattaat 11668113  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    |||||||| |||||||| |||||||||||||||||| || |||||||||||    
T  11668114 caatgaatgtaaaaagtcaaatttttcttataaataggaccgaaggaagta 11668164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 199 - 349
Target Start/End: Original strand, 28677316 - 28677466
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  28677316 tactccctccggtcctatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattact 28677415  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    |||| |||||||||||| || ||||||||||||||| ||||| ||| ||||    
T  28677416 caataaatctaaaaagtcaattttttcttataaataggatcggagggagta 28677466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 36245375 - 36245510
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||   ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  36245375 tactccctccggtcctgtttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattact 36245474  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||||||||||| || |||||||||||||||    
T  36245475 caatgaatctaaaaagtcaattttttcttataaata 36245510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 218 - 344
Target Start/End: Original strand, 8566099 - 8566225
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| | |    
T  8566099 tataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaatgaatctaaaaaatca 8566198  T
Q  318 aatttttcttataaataagatcgaagg 344  Q
    ||||||||||||||||| || ||||||    
T  8566199 aatttttcttataaataggaccgaagg 8566225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 199 - 349
Target Start/End: Original strand, 9979800 - 9979949
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||||  || |||||||||||||||||||| ||||| |    
T  9979800 tacttcctccgatcttatttataagaaatatttgactattttgatttatt-cataaatgatgtatttagtcaatattctagacaagatacatgaattact 9979898  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    |||| |||||||||||| |||||||||||||||||||| ||| ||| ||||    
T  9979899 caataaatctaaaaagtcaaatttttcttataaataagttcggagggagta 9979949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 205 - 332
Target Start/End: Original strand, 45441441 - 45441568
Alignment:
Q  205 ctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatga 304  Q
    ||||||||  ||||||| |||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||| |||||| ||| |||    
T  45441441 ctccggtcctatttatatgaaatatttgacttttttgatttattgtatagatgatgtatttgatctatattctagacaagatacaccaattattcattga 45441540  T
Q  305 atctaaaaagttaaatttttcttataaa 332  Q
    |||||||||||||| ||||| |||||||    
T  45441541 atctaaaaagttaatttttttttataaa 45441568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 206 - 334
Target Start/End: Complemental strand, 6838517 - 6838391
Alignment:
Q  206 tccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaa 305  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  6838517 tccgatcttatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacattaattactcaatgaa 6838418  T
Q  306 tctaaaaagttaaatttttcttataaata 334  Q
    ||  ||||   ||||||||||||||||||    
T  6838417 tc--aaaaaccaaatttttcttataaata 6838391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 199 - 331
Target Start/End: Complemental strand, 45533379 - 45533247
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||||||||| |||| |||||||||||| ||||||||||||| |||||||| |||||| ||||||||| ||||||||||||||||||||||| |||||      
T  45533379 tacttcctcctgtcttatttataagaaacatttgacttttttaattcattgtataaataatgtatttggtctatattctagacaagatacattaattaca 45533280  T
Q  299 caatgaatctaaaaagttaaatttttcttataa 331  Q
     |||||||||||||||| || ||||||||||||    
T  45533279 taatgaatctaaaaagtcaattttttcttataa 45533247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 30869201 - 30869320
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||||| |||| ||||||| ||||||||| |||| |||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  30869201 atttatatgaaacatttgacgtttttgatttattgtataaataatgtatttggtctatattctagacaagatacatcaattactcaatgaatctaaaaag 30869300  T
Q  315 ttaaatttttcttataaata 334  Q
    | ||| ||||||||||||||    
T  30869301 tcaaaattttcttataaata 30869320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 206 - 337
Target Start/End: Complemental strand, 41850738 - 41850607
Alignment:
Q  206 tccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaa 305  Q
    |||||||  |||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| || || | |||||| ||||| ||||||||    
T  41850738 tccggtcctatttataagaaacattttacttttttgattcattgcataaatgatgtatttgctctatattttataccaaatacattaattattcaatgaa 41850639  T
Q  306 tctaaaaagttaaatttttcttataaataaga 337  Q
    |||||||| |||| ||||||||||||||||||    
T  41850638 tctaaaaaattaactttttcttataaataaga 41850607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 10462509 - 10462385
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| ||| ||| ||||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||| | |||||||||||||||||    
T  10462509 atttataagaaacatt-gacattttttattcattgcataaatgatgtatttggtatatattttagacaagatacatcaatcactcaatgaatctaaaaag 10462411  T
Q  315 ttaaatttttcttataaataagatcg 340  Q
    | | ||||||||||||||||||||||    
T  10462410 tcacatttttcttataaataagatcg 10462385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 215 - 352
Target Start/End: Complemental strand, 13807371 - 13807238
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||| | |||    |||||||| |||||||||||||||||    
T  13807371 atttataagaaacatttgacttttttgattcattacataaatgatatatttgatctatattctaaagaag----atcaattactcaatgaatctaaaaag 13807276  T
Q  315 ttaaatttttcttataaataagatcgaaggaagtagta 352  Q
    | || |||||||||||||||||| || ||| |||||||    
T  13807275 tcaactttttcttataaataagaccggagggagtagta 13807238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 215 - 330
Target Start/End: Original strand, 29365636 - 29365751
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||| || | |||||| ||||| |||||||||||||||||    
T  29365636 atttataagaaacatttgacttttttaatacattgcataaatgatgtatttgatctatattctataccaaatacattaattactcaatgaatctaaaaag 29365735  T
Q  315 ttaaatttttcttata 330  Q
    | || |||||||||||    
T  29365736 tcaattttttcttata 29365751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 215 - 349
Target Start/End: Original strand, 39153302 - 39153434
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||| ||||| | |||||||||||| |||||||| ||||||||    
T  39153302 atttataagaaacatttgacttttttgattcattgcataaatgatgtatttagtctatattatagaccaaatacatcaattactcaatgaagctaaaaag 39153401  T
Q  315 ttaaatttttcttataaataagatcgaaggaagta 349  Q
    | ||  |||| |||||||||||| |||||| ||||    
T  39153402 tcaa--tttttttataaataagaccgaagggagta 39153434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 205 - 334
Target Start/End: Original strand, 2523775 - 2523904
Alignment:
Q  205 ctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattcta-gacaagatacatcaattaatcaatg 303  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||| || ||||||||||| | |||| ||||| ||||| ||||||    
T  2523775 ctccggtcttatttataagaaacatttgacttttttgattcattgcataaacgatgtatctggtctatattctatgccaag-tacattaattactcaatg 2523873  T
Q  304 aatctaaaaagttaaatttttcttataaata 334  Q
    |||||||||||| || |||||||||||||||    
T  2523874 aatctaaaaagtcaactttttcttataaata 2523904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 205 - 337
Target Start/End: Complemental strand, 48082941 - 48082810
Alignment:
Q  205 ctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatga 304  Q
    ||||||||  |||||||| ||||||||||||||||| ||||||| |||||||| |||||||| ||||||||||| ||| ||||||| |||||  ||||||    
T  48082941 ctccggtcctatttataataaatatttgactttttttattcattacataaatggtgtatttg-tctatattctacacatgatacattaattacacaatga 48082843  T
Q  305 atctaaaaagttaaatttttcttataaataaga 337  Q
    ||||||||||| || ||||||||||||||||||    
T  48082842 atctaaaaagtcaactttttcttataaataaga 48082810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 215 - 315
Target Start/End: Original strand, 2399967 - 2400067
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||| ||||| |||||||||||||| |||| ||| ||||||||    
T  2399967 atttataagaaacatttgacttttttgattcattgtataaatgatgtatttaatctatattttagactagatacatcaattattcaacgaacctaaaaag 2400066  T
Q  315 t 315  Q
    |    
T  2400067 t 2400067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 2680873 - 2680993
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctaga-caagatacatcaattaatcaatgaatctaaaaa 313  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||  |||||||||  ||||  |||| ||||||||||    
T  2680873 atttataagaaatatttgacttttttgattcattatataaatgatgtatttgatctatattctagagaaagatacattcattatacaataaatctaaaaa 2680972  T
Q  314 gttaaatttttcttataaata 334  Q
    || || ||||| |||||||||    
T  2680973 gtcaacttttttttataaata 2680993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 206 - 333
Target Start/End: Complemental strand, 2610328 - 2610202
Alignment:
Q  206 tccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaa 305  Q
    |||||||| |||||||||||| | | || |||||| ||||||||||||||||||||||||  |||||||||||||| | |||||||||||| ||||||||    
T  2610328 tccggtcttatttataagaaacaat-gaattttttaattcattgcataaatgatgtatttagtctatattctagaccaaatacatcaattactcaatgaa 2610230  T
Q  306 tctaaaaagttaaatttttcttataaat 333  Q
    | |||||| | |||||||||||||||||    
T  2610229 tttaaaaaatcaaatttttcttataaat 2610202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 4926040 - 4925905
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||||||| ||||  |||||||| ||| ||| ||||||| ||||| |||||| ||||||| |||||  |||||||| |||||||| ||||||||||| |    
T  4926040 tacttcctctggtcctatttataataaacattcgacttttatgatttattgcacaaatgatatatttagtctatattttagacaagttacatcaattact 4925941  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
     |||||||||||||||| ||||||||||||||||||    
T  4925940 taatgaatctaaaaagtcaaatttttcttataaata 4925905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 235 - 334
Target Start/End: Complemental strand, 44682679 - 44682580
Alignment:
Q  235 ttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||||||||||||||||||| |||||| |||||| ||||||||| |||||||| ||| | ||||||||| |||||| ||||||||||||||||||    
T  44682679 ttttttgattcattgcataaatgatatatttggtctataatctagacaaaatacatcagttacttaatgaatctcaaaagtcaaatttttcttataaata 44682580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 10007589 - 10007710
Alignment:
Q  215 atttataagaaatatttgacttttttg--attcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaa 312  Q
    |||||||| ||| |||||||||||||   ||||||| ||||||| ||||||||| ||||||||||| ||||||||||| |||||  ||||||||||||||    
T  10007589 atttataataaacatttgactttttttttattcatttcataaattatgtatttggtctatattctacacaagatacattaattatacaatgaatctaaaa 10007688  T
Q  313 agttaaatttttcttataaata 334  Q
    ||| || |||||||||||||||    
T  10007689 agtcaactttttcttataaata 10007710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 215 - 324
Target Start/End: Complemental strand, 24163402 - 24163294
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||| || |||||||||||  |||||||||| |||||  ||||||||||||||||    
T  24163402 atttataagaaacatttcacttttttaattcattgcataaatgatgtatatggtctatattctacgcaagatacattaattatacaatgaatctaaaaag 24163303  T
Q  315 ttaaattttt 324  Q
     |||||||||    
T  24163302 -taaattttt 24163294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 34117981 - 34118069
Alignment:
Q  242 attcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttata 330  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||  |||||||| |||||||| || |||||||||||    
T  34117981 attcattgcataaatgatgtatttggtctatattctagacaagatacattaattacacaatgaatttaaaaagtcaactttttcttata 34118069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 218 - 333
Target Start/End: Original strand, 32811728 - 32811842
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    |||||| |||||||||||||||| ||| ||| ||||||||||||||||| || |||||||| || | ||| |||||||| |||||||||||||||| |||    
T  32811728 tataagcaatatttgactttttt-attaattccataaatgatgtatttggtccatattctataccatataaatcaattactcaatgaatctaaaaaatta 32811826  T
Q  318 aatttttcttataaat 333  Q
    | ||||||||||||||    
T  32811827 attttttcttataaat 32811842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 208 - 334
Target Start/End: Complemental strand, 30823849 - 30823723
Alignment:
Q  208 cggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatc 307  Q
    |||||| |||||||| ||||||||||  ||||| |||||||  |||||| ||||||||| ||||||||||| || | |||||| ||||  ||||||||||    
T  30823849 cggtcttatttataaaaaatatttgatattttttattcattatataaataatgtatttggtctatattctataccaaatacattaatttctcaatgaatc 30823750  T
Q  308 taaaaagttaaatttttcttataaata 334  Q
    |||||||| ||| ||||||||||||||    
T  30823749 taaaaagtcaaaattttcttataaata 30823723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 228 - 330
Target Start/End: Original strand, 40142801 - 40142903
Alignment:
Q  228 atttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttctt 327  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||| ||| ||||||||||| |||||  |||| |||||||||| | || ||||||||    
T  40142801 atttgacttttttgattcattgcataaataatgtatttggtctatatcctaaacaagatacattaattatacaataaatctaaaaaatcaattttttctt 40142900  T
Q  328 ata 330  Q
    |||    
T  40142901 ata 40142903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 32811396 - 32811511
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    ||||||||| | || ||||||||||||||||| |||| ||||||||||| ||||| |||||| | || ||||||||||| | |||||||||||||| |||    
T  32811396 tataagaaacaatttacttttttgattcattgaataattgatgtatttggtctat-ttctaggctaggtacatcaattactgaatgaatctaaaaaatta 32811494  T
Q  318 aatttttcttataaata 334  Q
    | |||||||||||||||    
T  32811495 actttttcttataaata 32811511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 198 - 337
Target Start/End: Original strand, 1366593 - 1366731
Alignment:
Q  198 ctacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaa 297  Q
    |||| ||||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| ||||  || || |||||||||||     
T  1366593 ctacctcctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctgaactaggtacatcaattat 1366691  T
Q  298 tcaatgaatctaaaaagttaaatttttcttataaataaga 337  Q
    | ||||||||||||||||||| ||||||| ||||||||||    
T  1366692 tgaatgaatctaaaaagttaactttttctgataaataaga 1366731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 4826910 - 4826776
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | |  ||||||||||| |    
T  4826910 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaagtacatcaattatt 4826812  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
     ||||||||||||||||||| |||||||||||||||    
T  4826811 gaatgaatctaaaaagttaactttttcttataaata 4826776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 219 - 334
Target Start/End: Original strand, 27231853 - 27231967
Alignment:
Q  219 ataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaa 318  Q
    |||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||||||||| | |||||||||||||||||||    
T  27231853 ataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagttaa 27231951  T
Q  319 atttttcttataaata 334  Q
     |||||||||||||||    
T  27231952 ctttttcttataaata 27231967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 217 - 315
Target Start/End: Original strand, 7456436 - 7456534
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||| |  ||||||||    ||||||||||| ||||| ||||||||||||||||||    
T  7456436 ttataagaaatatttgactttttagattcattgtataaatgatgtatctagtctatatttacaacaagatacattaattactcaatgaatctaaaaagt 7456534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 202 - 334
Target Start/End: Original strand, 47942839 - 47942971
Alignment:
Q  202 ttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaa 301  Q
    |||||||||||| |||||||  |||||||| ||||||||||||||||| || ||| || ||||| || |||||| ||||||| |||||| ||||| | ||    
T  47942839 ttcctccggtcttatttatataaaatatttcacttttttgattcattgtatgaataatatatttaatttatattttagacaaaatacattaattatttaa 47942938  T
Q  302 tgaatctaaaaagttaaatttttcttataaata 334  Q
    | ||| |||||||| |||  |||||||||||||    
T  47942939 taaatttaaaaagtcaaaaatttcttataaata 47942971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 202 - 334
Target Start/End: Original strand, 47948269 - 47948401
Alignment:
Q  202 ttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaa 301  Q
    |||||||||||| |||||||  |||||||| ||||||||||||||||| || ||| || ||||| || |||||| ||||||| |||||| ||||| | ||    
T  47948269 ttcctccggtcttatttatataaaatatttcacttttttgattcattgtatgaataatatatttaatttatattttagacaaaatacattaattatttaa 47948368  T
Q  302 tgaatctaaaaagttaaatttttcttataaata 334  Q
    | ||| |||||||| |||  |||||||||||||    
T  47948369 taaatttaaaaagtcaaaaatttcttataaata 47948401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 218 - 337
Target Start/End: Complemental strand, 31227622 - 31227504
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | | ||||||||| || | |||||||||||||| |||    
T  31227622 tataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaaatacatcaactattgaatgaatctaaaaaatta 31227524  T
Q  318 aatttttcttataaataaga 337  Q
    | ||||||||||||||||||    
T  31227523 actttttcttataaataaga 31227504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 350
Target Start/End: Original strand, 27163190 - 27163311
Alignment:
Q  229 tttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttctta 328  Q
    ||||||||||| | ||||||| ||||||||||||| || |||||||| || || | |||||||| ||| | | |||||||||||||| ||| ||| ||||    
T  27163190 tttgactttttaggttcattgaataaatgatgtatgtggtctatattataaaccacatacatcatttatttagtgaatctaaaaagtgaaaatttactta 27163289  T
Q  329 taaataagatcgaaggaagtag 350  Q
    ||||||||| ||| ||||||||    
T  27163290 taaataagaccgatggaagtag 27163311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 313
Target Start/End: Complemental strand, 48838444 - 48838347
Alignment:
Q  216 tttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    ||||||||||| |||| |||||||| ||||||| ||||||||||||||||| |||||||| || || | |||||| ||||  ||||||||||||||||    
T  48838444 tttataagaaacatttaacttttttaattcattacataaatgatgtatttggtctatattttataccaaatacattaattgctcaatgaatctaaaaa 48838347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 324
Target Start/End: Original strand, 40176045 - 40176160
Alignment:
Q  209 ggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatct 308  Q
    ||||| |||||||| ||| |||| |||||||| ||||||||| ||||||||||||||| ||||||||||| || |  ||||| ||||  | |||||||||    
T  40176045 ggtctcatttataaaaaacatttcactttttttattcattgcttaaatgatgtatttggtctatattctaaaccaagtacattaatttcttaatgaatct 40176144  T
Q  309 aaaaagttaaattttt 324  Q
    ||||||| || |||||    
T  40176145 aaaaagtcaatttttt 40176160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 28298987 - 28298919
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaa 283  Q
    |||||||| ||| |||||||||||||||||||||||||||||  | |||||||||||||||||| ||||    
T  28298987 atttataaaaaacatttgacttttttgattcattgcataaatagtatatttgatctatattctaaacaa 28298919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 43174358 - 43174299
Alignment:
Q  275 tctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    |||||||||||||||||||||| | ||| |||||||||||||||| ||||||||||||||    
T  43174358 tctagacaagatacatcaattatttaattaatctaaaaagttaaaattttcttataaata 43174299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 235 - 310
Target Start/End: Complemental strand, 47987263 - 47987188
Alignment:
Q  235 ttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaa 310  Q
    |||||| ||||||||||||||||||||||||| | |||| |||| |||||||| |||||||| ||||| |||||||    
T  47987263 ttttttaattcattgcataaatgatgtatttggtttatactctaaacaagatatatcaattattcaattaatctaa 47987188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 337
Target Start/End: Original strand, 28020016 - 28020136
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| ||||||   ||||||| |||||| | ||||||||||||||     
T  28020016 atttataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggtcagatacaacaattatttaatgaatctaaaaa- 28020113  T
Q  315 ttaaatttttcttataaataaga 337  Q
     | ||||||| ||||||||||||    
T  28020114 atcaattttttttataaataaga 28020136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 337
Target Start/End: Original strand, 30486579 - 30486717
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||||||||||||| |||||||||  |  ||| | ||||| ||||||||| |||||| |||||| || | |||||  || || | |||||||| ||| |    
T  30486579 tacttcctccggtctcatttataagtcaattttcattttttagattcattgaataaataatgtatgtggtatatatcatacaccacatacatcatttatt 30486678  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataaga 337  Q
    |||| |||||||||||| ||| ||| |||||||||||||    
T  30486679 caataaatctaaaaagtcaaaatttacttataaataaga 30486717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 217 - 330
Target Start/End: Complemental strand, 45123376 - 45123263
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||||| || ||||||||||||||||| |||| |||||||| | |||||||||    | ||||||||| ||||| || |||||| ||||||||     
T  45123376 ttataagaaataattaacttttttgattcattgtataagtgatgtatctaatctatatttataataagatacattaattattctatgaatttaaaaagtc 45123277  T
Q  317 aaatttttcttata 330  Q
    || ||||| |||||    
T  45123276 aacttttttttata 45123263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 230 - 334
Target Start/End: Complemental strand, 39153405 - 39153301
Alignment:
Q  230 ttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttat 329  Q
    |||||||||| | |||||||  ||| ||||||||||| |||||| | ||||| | |||||||| |||  ||||||||| ||||||| |||| ||||||||    
T  39153405 ttgactttttagcttcattgagtaattgatgtatttggtctataatatagactaaatacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttat 39153306  T
Q  330 aaata 334  Q
    |||||    
T  39153305 aaata 39153301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 330
Target Start/End: Complemental strand, 8566214 - 8566099
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| |||||| ||||| |||||||||  ||| |||||||| |  |||| | | ||||| | |||||||| |||  ||||||||| ||||||    
T  8566214 atttataagaaaaatttgattttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaag 8566115  T
Q  315 ttaaatttttcttata 330  Q
    |||||| |||||||||    
T  8566114 ttaaatgtttcttata 8566099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 332
Target Start/End: Complemental strand, 36245527 - 36245392
Alignment:
Q  197 actacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaatta 296  Q
    |||||| ||||| |||  |||||||||||| | |||||||||| |||||||||  ||| |||||||| |  |||| | | ||||| | |||||||| |||    
T  36245527 actactccctcctgtcctatttataagaaaaaattgactttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcattta 36245428  T
Q  297 atcaatgaatctaaaaagttaaatttttcttataaa 332  Q
      ||||||||| ||||||| |||| |||||||||||    
T  36245427 tgcaatgaatcaaaaaagtcaaatgtttcttataaa 36245392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 337
Target Start/End: Complemental strand, 2523919 - 2523781
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||||||| | |||||||||| |||||||||  ||| | ||||| |||   || | | ||||| |||||||||  |||      
T  2523919 tactccctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggcatagaatatagaccagatacatcgtttatg 2523820  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataaga 337  Q
    ||||||||| ||||||| |||| ||||||||||||||||    
T  2523819 caatgaatcaaaaaagtcaaatgtttcttataaataaga 2523781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 340
Target Start/End: Original strand, 6838376 - 6838515
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||||| |||||||  |||||||||||| |||||   ||||||||||||||  ||| | |||||| |  |||| | | ||||| | |||||||| |||      
T  6838376 tacttcatccggtcatatttataagaaaaatttgg--tttttgattcattgagtaattaatgtatcttgtctagaatatagaccaaatacatcatttatg 6838473  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcg 340  Q
    ||||||||| ||||||| |||| |||||||||||||||||||    
T  6838474 caatgaatcaaaaaagtcaaatgtttcttataaataagatcg 6838515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 331
Target Start/End: Complemental strand, 10674254 - 10674140
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| | |||||||||| ||||||||   ||| |||||||| | |||||||||    ||||||||||| ||||| |||||||| |||||||||     
T  10674254 ttataagaaacaattgactttttagattcattatgtaagtgatgtatctaatctatatttataacaagatacattaattattcaatgaacctaaaaagtc 10674155  T
Q  317 aaatttttcttataa 331  Q
    |||| ||| ||||||    
T  10674154 aaatgttttttataa 10674140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 337
Target Start/End: Complemental strand, 12426679 - 12426541
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||||||||||||| ||||| |||| | | || ||||||| ||| ||||  |||| | | ||||||| | || ||||| ||| ||||||||  |||| |    
T  12426679 tacttcctccggtcttatttacaagagacagtttactttttagatacattaaataatttacgtatttggtttagattcttgactagatacatacattatt 12426580  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataaga 337  Q
    ||||| ||||||||| |||| ||| ||||||||||||||    
T  12426579 caatgtatctaaaaaattaactttctcttataaataaga 12426541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 205 - 337
Target Start/End: Original strand, 2610192 - 2610323
Alignment:
Q  205 ctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatga 304  Q
    ||||||||  |||||||||||| |||||| |||||  ||||||||  ||| ||||||||||| |||| | | ||||| | |||||||| |||  ||||||    
T  2610192 ctccggtccgatttataagaaaaatttgattttttaaattcattgagtaattgatgtatttggtctagaatatagactaaatacatcatttatgcaatga 2610291  T
Q  305 atctaaaaagttaaatttttcttataaataaga 337  Q
    || |||||| || | | ||||||||||||||||    
T  2610292 at-taaaaaattcattgtttcttataaataaga 2610323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 198 - 338
Target Start/End: Complemental strand, 27163311 - 27163171
Alignment:
Q  198 ctacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaa 297  Q
    ||||||||  |||||| ||||||||| ||  ||| ||||||| |||||| |  ||||||||||||| || | |||| | ||||| | |||||||| |||     
T  27163311 ctacttccatcggtcttatttataagtaaattttcactttttagattcactaaataaatgatgtatgtggtttataatatagaccacatacatcatttat 27163212  T
Q  298 tcaatgaatctaaaaagttaaatttttcttataaataagat 338  Q
    |||||||| ||||||||| ||| |||  |||||||| ||||    
T  27163211 tcaatgaacctaaaaagtcaaaatttatttataaatgagat 27163171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 199 - 331
Target Start/End: Complemental strand, 33901187 - 33901055
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||||||||||||||   |||||||||| |||||||||||| ||||||||   |||||||||||| |  ||||||||    ||||||||||| || || |    
T  33901187 tacttcctccggtctttattataagaaacatttgactttttagattcattatgtaaatgatgtatctagtctatatttataacaagatacattaactatt 33901088  T
Q  299 caatgaatctaaaaagttaaatttttcttataa 331  Q
    | ||||||| ||||| | || | ||||||||||    
T  33901087 ctatgaatcaaaaaaatcaattgtttcttataa 33901055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 217 - 349
Target Start/End: Original strand, 40234783 - 40234915
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| | |||||||||| |||||||||  ||| |||||||| |  ||||||||    ||||||||||| ||||| ||||||||| ||| |||      
T  40234783 ttataagaaacaattgactttttagattcattgtgtaactgatgtatctagtctatatttacaacaagatacatgaattactcaatgaatttaagaagac 40234882  T
Q  317 aaatttttcttataaataagatcgaaggaagta 349  Q
    |||  ||||||||||  ||||||||||| ||||    
T  40234883 aaaaatttcttataataaagatcgaagggagta 40234915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 362
Target Start/End: Original strand, 3411331 - 3411494
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||||| |||||||| ||||| |||| | | || ||||||| ||| ||||  |||| | ||||||||| | ||  |||| ||| || |||||  |||| |    
T  3411331 tacttcttccggtcttatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaggtacatacattatt 3411430  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagtagtagataaattta 362  Q
    ||||| ||||||||||| |||||| ||||||||||| ||||| ||| |||| ||  ||||||||    
T  3411431 caatgtatctaaaaagtcaaatttctcttataaataggatcggagggagtattatttaaattta 3411494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 11668164 - 11668029
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||||||| |||||  |||||||||||| ||||||||||||  ||||||||  ||| |||||||| |  |||| | | ||||  | ||| |||| |||      
T  11668164 tacttccttcggtcctatttataagaaaaatttgactttttacattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatg 11668065  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||| ||||||| |||| |||||||||||||    
T  11668064 caatgaatcaaaaaagtcaaatgtttcttataaata 11668029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 334
Target Start/End: Complemental strand, 28677450 - 28677331
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| | |||||||||| |||| ||||  ||| |||||||| |  |||| | | ||||| | |||||||| |||  ||||||||| ||||||    
T  28677450 atttataagaaaaaattgactttttagatttattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaag 28677351  T
Q  315 ttaaatttttcttataaata 334  Q
    | |||| |||||||||||||    
T  28677350 tcaaatgtttcttataaata 28677331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 41850595 - 41850730
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| ||| |||||| |||||||||||| | || | ||||| ||||||||| |||| | ||||||||| | || | | ||||  | |||||||| |||      
T  41850595 tactccctacggtcttatttataagaaaaagttaattttttagattcattgaataattaatgtatttggtataaaatatagagcaaatacatcatttatg 41850694  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||| ||||||| |||| |||||||||||||    
T  41850695 caatgaatcaaaaaagtaaaatgtttcttataaata 41850730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 233 - 324
Target Start/End: Original strand, 42457013 - 42457103
Alignment:
Q  233 acttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaattttt 324  Q
    ||||||||||||||||| |||  ||||||||||| ||||| |||||  | || ||||||||||| | ||| ||||||||||||||| |||||    
T  42457013 acttttttgattcattgaatagttgatgtatttggtctat-ttctaagctaggtacatcaattattgaataaatctaaaaagttaatttttt 42457103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 331
Target Start/End: Original strand, 8169110 - 8169223
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    ||||||| || | ||| |||||| | ||||||  ||||||||||||| || |||||||  ||||| | |||||||| ||| | |||||||||||||||||    
T  8169110 ttataagcaaaagttggctttttaggttcattcaataaatgatgtatgtggtctatata-tagactacatacatcatttattgaatgaatctaaaaagtt 8169208  T
Q  317 aaatttttcttataa 331  Q
    || |||| |||||||    
T  8169209 aacttttgcttataa 8169223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 331
Target Start/End: Complemental strand, 22618294 - 22618180
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| | |||||||||| | |||||||  ||| |||||||| |  ||||||||    ||||||||||| ||||| |||||||||||||||| |     
T  22618294 ttataagaaacaattgactttttaggttcattgtgtaagtgatgtatctagtctatatttacaacaagatacattaattactcaatgaatctaaaaaatc 22618195  T
Q  317 aaatttttcttataa 331  Q
    |||  ||||||||||    
T  22618194 aaaaatttcttataa 22618180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 315
Target Start/End: Original strand, 40362003 - 40362085
Alignment:
Q  233 acttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    ||||||| ||||||||| |||| ||||||||||||| |||||| ||||| | |||||| ||| | ||||| || |||||||||    
T  40362003 actttttagattcattgaataattgatgtatttgatttatattgtagaccaaatacattaatcattcaataaacctaaaaagt 40362085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 331
Target Start/End: Original strand, 41395679 - 41395793
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| | || |||||||| |||||||| |||| |||||||| |  ||||||||    | |||||| || ||||| || |||||||||||||||     
T  41395679 ttataagaaacaattaacttttttaattcattgtataagtgatgtatctagtctatatttataataagatatattaattattctatgaatctaaaaagtc 41395778  T
Q  317 aaatttttcttataa 331  Q
    || ||||||||||||    
T  41395779 aactttttcttataa 41395793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 339
Target Start/End: Complemental strand, 45981137 - 45981017
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||| |||||||| | |||||| ||||||| ||| ||||||||||||  | |||| ||||||  |||||||| | ||| ||||||||| | ||||||     
T  45981137 ttataaaaaatattt-atttttttaattcattacattaatgatgtattttgtatatactctagatcagatacatgagttattcaatgaat-ttaaaagtc 45981040  T
Q  317 aaatttttcttataaataagatc 339  Q
    || ||||||||||||||| ||||    
T  45981039 aattttttcttataaatatgatc 45981017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 13807239 - 13807291
Alignment:
Q  197 actacttcctccggtctaatttataagaaatatttgacttttttgattcattg 249  Q
    |||||| |||||||||| |||||||||||| | |||||||||| |||||||||    
T  13807239 actactccctccggtcttatttataagaaaaagttgactttttagattcattg 13807291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 349
Target Start/End: Complemental strand, 23871042 - 23870978
Alignment:
Q  285 atacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    |||||| ||||| |||||| ||| ||||| | |||||||||||||||||||||||| ||| ||||    
T  23871042 atacataaattattcaatgtatcgaaaaaatcaaatttttcttataaataagatcggagggagta 23870978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 339
Target Start/End: Complemental strand, 2400076 - 2399961
Alignment:
Q  224 aaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttt 323  Q
    |||| ||||||||||| | ||| ||| |||| |||||||| |  |||| | | ||||  | |||||||| |||  ||||||||| ||||||| |||| ||    
T  2400076 aaatgtttgactttttaggttcgttgaataattgatgtatctagtctaaaatatagattaaatacatcatttatacaatgaatcaaaaaagtcaaatgtt 2399977  T
Q  324 tcttataaataagatc 339  Q
    ||||||||||||||||    
T  2399976 tcttataaataagatc 2399961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 331
Target Start/End: Complemental strand, 23797456 - 23797361
Alignment:
Q  236 tttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    |||| ||||||||  || |||||||||| || ||| |||| ||||| | |||||||| ||||| ||||||||||||| |  ||||||| |||||||    
T  23797456 ttttagattcattcaattaatgatgtatctggtctttattatagactacatacatcatttaatgaatgaatctaaaatgcaaaattttgcttataa 23797361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 331
Target Start/End: Original strand, 28752127 - 28752206
Alignment:
Q  252 taaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||||||||||||| |||||||| | ||| | ||| |||| ||||| ||||||| |||||| |||| |||| |||||||    
T  28752127 taaatgatgtatttggtctatattattgaccaaatatatcatttaatgaatgaatgtaaaaaattaatttttgcttataa 28752206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 210 - 349
Target Start/End: Complemental strand, 30486718 - 30486579
Alignment:
Q  210 gtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatcta 309  Q
    |||| ||||||||| ||  ||||||||||| |||| |||| ||||||||||||| || | |||  | || || | |||||| | ||| ||||||||||||    
T  30486718 gtcttatttataagtaaattttgactttttagatttattgaataaatgatgtatgtggtgtatgatatataccacatacattatttattcaatgaatcta 30486619  T
Q  310 aaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    |||| | ||| ||  ||||||||| ||| || ||||||||    
T  30486618 aaaaatgaaaattgacttataaatgagaccggaggaagta 30486579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 331
Target Start/End: Complemental strand, 7456490 - 7456436
Alignment:
Q  277 tagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||| |||||||||| |||  ||||||||||||||||| |||| ||||||||||    
T  7456490 tagactagatacatcatttatacaatgaatctaaaaagtcaaatatttcttataa 7456436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 343
Target Start/End: Complemental strand, 16861575 - 16861517
Alignment:
Q  285 atacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataagatcgaag 343  Q
    |||||||||||| |||||||||||||||||| || | ||| ||||| |||||| |||||    
T  16861575 atacatcaattattcaatgaatctaaaaagtcaattgttttttatatataagaccgaag 16861517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 18819978 - 18820072
Alignment:
Q  251 ataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataagatcgaagga 345  Q
    ||||||||| ||| | |||| || | ||||||| |||||||| ||| | ||||||||||||| |||||||||| ||| |||  | ||||||||||    
T  18819978 ataaatgatatatgtaatctttaatatagacaacatacatcatttattgaatgaatctaaaatgttaaattttacttgtaataatgatcgaagga 18820072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 256
Target Start/End: Original strand, 21124482 - 21124520
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaat 256  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  21124482 tataagaaacattttacttttttgattcattgcataaat 21124520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 331
Target Start/End: Complemental strand, 41487922 - 41487808
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| | |||| ||||||| |||||||  ||| |||||||| |  ||||||||    | ||||||||| ||||| || ||||| |||||||||     
T  41487922 ttataagaaacaattgatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtc 41487823  T
Q  317 aaatttttcttataa 331  Q
    || ||||||||||||    
T  41487822 aactttttcttataa 41487808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 41863661 - 41863715
Alignment:
Q  280 acaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||||| |||||  |||||||| |||||||| || |||||||||||||||    
T  41863661 acaagatacattaattacacaatgaatttaaaaagtcaattttttcttataaata 41863715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 319
Target Start/End: Complemental strand, 28409662 - 28409597
Alignment:
Q  254 aatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaa 319  Q
    |||||| ||| ||||||||||| | ||| | |||||||| ||| | ||||||||||||||||||||    
T  28409662 aatgatatatatgatctatattgtggactacatacatcatttattgaatgaatctaaaaagttaaa 28409597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 344
Target Start/End: Complemental strand, 2680906 - 2680862
Alignment:
Q  300 aatgaatctaaaaagttaaatttttcttataaataagatcgaagg 344  Q
    |||||||| ||||||| |||| ||||||||||||| |||||||||    
T  2680906 aatgaatcaaaaaagtcaaatatttcttataaataggatcgaagg 2680862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 309
Target Start/End: Original strand, 5761795 - 5761863
Alignment:
Q  241 gattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatcta 309  Q
    ||||||||  |||| || ||||||||||| ||||| |||| || |||||||||||| ||||| ||||||    
T  5761795 gattcattaaataactggtgtatttgatcaatattatagataaaatacatcaattattcaataaatcta 5761863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 10007725 - 10007661
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtat 263  Q
    |||| |||||||||  |||||||||||| | |||||||||| ||||||||| |||| | ||||||    
T  10007725 tactccctccggtcctatttataagaaaaagttgactttttagattcattgtataattaatgtat 10007661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 330
Target Start/End: Complemental strand, 18064852 - 18064740
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    ||||||||| | ||||| |||||  |||||||  ||| |||||||| |  |||||||| |  | ||||||||| ||||| || |||||  ||||||||||    
T  18064852 tataagaaacagttgacatttttagttcattgtttaagtgatgtatctagtctatattttcaataagatacattaattattctatgaacttaaaaagtta 18064753  T
Q  318 aatttttcttata 330  Q
    | |||||||||||    
T  18064752 actttttcttata 18064740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 21586922 - 21586846
Alignment:
Q  236 tttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaa 312  Q
    |||| ||||||||  || |||||||||| |||||| |||| ||||| | |||||||| | ||| |||||||||||||    
T  21586922 ttttagattcattcaattaatgatgtatatgatctttattatagaccacatacatcattgaataaatgaatctaaaa 21586846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 316
Target Start/End: Complemental strand, 29168455 - 29168391
Alignment:
Q  252 taaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||||||||||| ||||| | ||| | |||||| | ||||| |||||| ||||||||||    
T  29168455 taaatgatgtatttgatccatattattgaccaaatacattatttaataaatgaacctaaaaagtt 29168391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 318
Target Start/End: Original strand, 29835114 - 29835202
Alignment:
Q  230 ttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaa 318  Q
    |||||||||| |||| ||||  |||||||||||| | || ||||||    || ||||| || ||||| |||||||||||||||||||||    
T  29835114 ttgactttttagatttattgtgtaaatgatgtatctaatttatatttacaacgagatatattaattattcaatgaatctaaaaagttaa 29835202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 30457778 - 30457857
Alignment:
Q  251 ataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||||||||||| ||||||||| | ||||||| ||||| || ||| | ||||||| |||||||| || |||| |||||||    
T  30457778 ataaatgatgtatgtgatctata-tatagacaacatacaacatttattgaatgaatttaaaaagtgaacttttacttataa 30457857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 349
Target Start/End: Complemental strand, 32811441 - 32811377
Alignment:
Q  285 atacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    |||||||||||| |||||||||| ||||||| || | ||||||||| ||| ||||| ||| ||||    
T  32811441 atacatcaattattcaatgaatcaaaaaagtaaattgtttcttatatataggatcggagggagta 32811377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 349
Target Start/End: Original strand, 33901115 - 33901187
Alignment:
Q  277 tagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    ||||| |||||||||| |||   |||||||||||||||| |||| ||||||||||  |||| || ||||||||    
T  33901115 tagactagatacatcatttacataatgaatctaaaaagtcaaatgtttcttataataaagaccggaggaagta 33901187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 34564958 - 34565038
Alignment:
Q  235 ttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    ||||||||||||| | ||||||| || ||||| |||||| | ||||| | |||||||| ||| ||||| || |||||||||    
T  34564958 ttttttgattcatagaataaatggtgcatttggtctataatatagaccacatacatcacttattcaattaacctaaaaagt 34565038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 315
Target Start/End: Original strand, 35436265 - 35436337
Alignment:
Q  243 ttcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    ||||||| |||| | |||||| || || ||||| || || |||||||||||||| |||||||| |||||||||    
T  35436265 ttcattgaataacttatgtatctggtcaatattatatactagatacatcaattattcaatgaacctaaaaagt 35436337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 313
Target Start/End: Original strand, 44682571 - 44682679
Alignment:
Q  205 ctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatga 304  Q
    ||||||||  |||||||||||| |||||||||||  ||||||||   ||| ||||||||||  |||| ||| ||||| | ||| |||| |||  ||||||    
T  44682571 ctccggtcctatttataagaaaaatttgacttttgagattcattaagtaactgatgtattttgtctagattatagaccaaatatatcatttatgcaatga 44682670  T
Q  305 atctaaaaa 313  Q
    ||| |||||    
T  44682671 atcaaaaaa 44682679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 331
Target Start/End: Complemental strand, 45025743 - 45025611
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||||||||||||||   |||||||||| |||||| ||||| ||||||||   ||| |||||||| |  ||||||||    ||||||||||| ||||| |    
T  45025743 tacttcctccggtctttattataagaaacatttgattttttagattcattatgtaagtgatgtatctagtctatatttataacaagatacattaattatt 45025644  T
Q  299 caatgaatctaaaaagttaaatttttcttataa 331  Q
    | ||||| | ||||| | || | ||||||||||    
T  45025643 ctatgaaccaaaaaaatcaattgtttcttataa 45025611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 6e-56; HSPs: 86)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 215 - 349
Target Start/End: Original strand, 38040291 - 38040425
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38040291 atttataagaaacatttgacttttttgattcattgcataaatgatatatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 38040390  T
Q  315 ttaaatttttcttataaataagatcgaaggaagta 349  Q
    | |||||||||||||||||| || || ||||||||    
T  38040391 tcaaatttttcttataaataggaccggaggaagta 38040425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 38737946 - 38738065
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||    
T  38737946 atttataagaaacatttgacttttttgattcattgcataaaggatgtatttggtttatattctagacaagatacatcaattactcaatgaatctaaaaag 38738045  T
Q  315 ttaaatttttcttataaata 334  Q
    ||||||||||||||||||||    
T  38738046 ttaaatttttcttataaata 38738065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 204 - 334
Target Start/End: Complemental strand, 49944977 - 49944847
Alignment:
Q  204 cctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatg 303  Q
    |||||||||  ||||| |||||| |||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  49944977 cctccggtcctatttacaagaaacatttgatttttttgattcattgtataaatgatgtatttggtctatattctagacaagatacatcaattattcaatg 49944878  T
Q  304 aatctaaaaagttaaatttttcttataaata 334  Q
    |||||||||||||||||||||||||||||||    
T  49944877 aatctaaaaagttaaatttttcttataaata 49944847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 199 - 340
Target Start/End: Original strand, 519832 - 519973
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||| ||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||| |    
T  519832 tactccctccggtcctatttataataaacatttgacttttttgatttattgtataaatgatgtatttgatctatattctagataagatacatcaattact 519931  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcg 340  Q
    ||||||||||||||||||||| |||||||||||||| |||||    
T  519932 caatgaatctaaaaagttaaaattttcttataaataggatcg 519973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 205 - 337
Target Start/End: Complemental strand, 26070967 - 26070835
Alignment:
Q  205 ctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatga 304  Q
    ||||||||| |||||||||||| |||| |||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||| |||||||    
T  26070967 ctccggtcttatttataagaaacattttacttttttgattcattgcataaataatgtatttggtctatattctagataagatacatcaattactcaatga 26070868  T
Q  305 atctaaaaagttaaatttttcttataaataaga 337  Q
    ||||||||||| ||||||  |||||||||||||    
T  26070867 atctaaaaagtcaaatttcacttataaataaga 26070835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 215 - 351
Target Start/End: Complemental strand, 34332609 - 34332473
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||    
T  34332609 atttataagaaacatttgacttttttgattcattggataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatctaaaaag 34332510  T
Q  315 ttaaatttttcttataaataagatcgaaggaagtagt 351  Q
    | ||| |||||||||| ||||||| | ||| ||||||    
T  34332509 tcaaagttttcttatatataagattggagggagtagt 34332473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 202 - 349
Target Start/End: Original strand, 44939068 - 44939215
Alignment:
Q  202 ttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaa 301  Q
    |||||||||||  |||||||||||| ||||||||||||| |||||||| |||||||||||||||| |||||||||||||  |||||||||||||| ||||    
T  44939068 ttcctccggtcctatttataagaaacatttgactttttttattcattgtataaatgatgtatttggtctatattctagattagatacatcaattactcaa 44939167  T
Q  302 tgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    |||||||||||| | || ||| ||||||||||| ||||||||||||||    
T  44939168 tgaatctaaaaaatcaattttctcttataaatatgatcgaaggaagta 44939215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 215 - 328
Target Start/End: Complemental strand, 15343070 - 15342957
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||  |||||||||||||||     
T  15343070 atttataagaaatatttgatttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacattaattacacaatgaatctaaaaat 15342971  T
Q  315 ttaaatttttctta 328  Q
    | || |||||||||    
T  15342970 tcaactttttctta 15342957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 206 - 337
Target Start/End: Original strand, 27819317 - 27819449
Alignment:
Q  206 tccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgt-atttgatctatattctagacaagatacatcaattaatcaatga 304  Q
    |||||||| |||||||| ||||||||||||||||||||||||| |||||||||| | ||||||| |||||| ||||||| ||||| ||| || |||||||    
T  27819317 tccggtcttatttataaaaaatatttgacttttttgattcatttcataaatgatattatttgatttatattttagacaaaatacaccaaatattcaatga 27819416  T
Q  305 atctaaaaagttaaatttttcttataaataaga 337  Q
    ||||||||||||||||||||||| |||||||||    
T  27819417 atctaaaaagttaaatttttcttgtaaataaga 27819449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 208 - 334
Target Start/End: Complemental strand, 23923690 - 23923564
Alignment:
Q  208 cggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatc 307  Q
    |||||| |||||||||||| | || |||||| ||||||||||||||||||||| ||||| |||||||||||||||| |||||| ||||| ||||||||||    
T  23923690 cggtcttatttataagaaaaaatttacttttctgattcattgcataaatgatgcatttggtctatattctagacaatatacattaattactcaatgaatc 23923591  T
Q  308 taaaaagttaaatttttcttataaata 334  Q
    |||||| | ||||||||||||||||||    
T  23923590 taaaaattcaaatttttcttataaata 23923564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 210 - 349
Target Start/End: Original strand, 50155307 - 50155447
Alignment:
Q  210 gtctaatttataagaaatatttgacttttttga-ttcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatct 308  Q
    |||| |||||||| |||||||||| |||||| | |||||||||||||||||||||||| |||||||| ||||| | |||||||||||| |||||||||||    
T  50155307 gtcttatttataataaatatttgattttttttaattcattgcataaatgatgtatttggtctatattatagaccaaatacatcaattactcaatgaatct 50155406  T
Q  309 aaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    ||||||| || ||||||||||||||| || || ||||||||    
T  50155407 aaaaagtcaactttttcttataaataggaccggaggaagta 50155447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 26924362 - 26924227
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||| || |  ||||| ||| | |    
T  26924362 tactccctccggtcctatttataagaaacatttgacttttttgattcattgaataaatgatgtatttggtctatattctataccaagtacattaatgact 26924263  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    |||||||| |||||||| || |||||||||||||||    
T  26924262 caatgaatttaaaaagtcaactttttcttataaata 26924227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 38590084 - 38590202
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    ||||||||  ||||||||||||||||||||| ||||||| ||||||||| ||||||||||| || |||||||||||||| ||||||||||||||||||||    
T  38590084 tataagaagcatttgacttttttgattcatttcataaataatgtatttggtctatattctataccagatacatcaattactcaatgaatctaaaaagtta 38590183  T
Q  318 a--atttttcttataaata 334  Q
    |   |||||||||||||||    
T  38590184 attttttttcttataaata 38590202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 334
Target Start/End: Original strand, 37515095 - 37515224
Alignment:
Q  205 ctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatga 304  Q
    ||||| ||| |||||||| ||| |||| |||||||| ||| ||||||||||| |||||||| ||| |||||| |||||| |||||| ||||| | |||||    
T  37515095 ctccgatctcatttataaaaaacatttaactttttttatttattgcataaataatgtatttaatccatattccagacaacatacattaattacttaatga 37515194  T
Q  305 atctaaaaagttaaatttttcttataaata 334  Q
    ||||||||||||||||||||||||||||||    
T  37515195 atctaaaaagttaaatttttcttataaata 37515224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 215 - 334
Target Start/End: Complemental strand, 8971361 - 8971242
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattcta-gacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    |||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||| | ||| |||||| ||||| ||||||||||||| ||    
T  8971361 atttataagaaatatttgacttttttgattcattgcataaataacgtgtttgatctatattctatgtcaa-atacattaattactcaatgaatctaacaa 8971263  T
Q  314 gttaaatttttcttataaata 334  Q
     |||| |||||||||||||||    
T  8971262 cttaattttttcttataaata 8971242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 215 - 337
Target Start/End: Complemental strand, 11386287 - 11386165
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatcta-aaaa 313  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||  |||||||||||||| ||| |||||||||| |||||||||||| ||||    
T  11386287 atttataagaaacatttgacttttt-gattcattgcataaatgatgtatttcgtctatattctagaccagaaacatcaattattcaatgaatctaaaaaa 11386189  T
Q  314 gttaaatttttcttataaataaga 337  Q
     | || ||||||||||||| ||||    
T  11386188 atcaattttttcttataaaaaaga 11386165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 220 - 313
Target Start/End: Complemental strand, 6661642 - 6661549
Alignment:
Q  220 taagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||| ||||| | ||||||||||||||    
T  6661642 taagaaacatttgacttttttgattaattgcataaatgatgtatttggtctatattctatacaagatacattaattactaaatgaatctaaaaa 6661549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 47912832 - 47912948
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||  ||||||||||||||| |||||  |||| ||| |||||||    
T  47912832 atttataagaaatatttgacttttttgatttattgtataaataatgtatttgatctata--ctagacaagatacattaattatacaataaatttaaaaag 47912929  T
Q  315 ttaaatttttcttataaata 334  Q
     | |||||||||||||||||    
T  47912930 -tcaatttttcttataaata 47912948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 26760188 - 26760307
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||| || |  ||||| ||| | ||||||||| ||||||     
T  26760188 atttataagaaacatttgacttttttgattcattgaataaatgatgtatttggtctatattctataccaagtacattaatgactcaatgaatttaaaaaa 26760287  T
Q  315 ttaaatttttcttataaata 334  Q
    | || |||||||||||||||    
T  26760288 tcaattttttcttataaata 26760307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 216 - 334
Target Start/End: Original strand, 24305681 - 24305799
Alignment:
Q  216 tttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    ||||||| |||||||||| |||||| |||||| |||||||||||||||  | | ||||||||| ||||||||||||||||| ||||| ||| |||||| |    
T  24305681 tttataaaaaatatttgattttttttattcatcgcataaatgatgtataaggtttatattctatacaagatacatcaattactcaataaatttaaaaaat 24305780  T
Q  316 taaatttttcttataaata 334  Q
    |||||||||||| ||||||    
T  24305781 taaatttttcttctaaata 24305799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 215 - 339
Target Start/End: Original strand, 34146820 - 34146943
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| |||| |||||||||||||||| || |||||||||||||||| |||||||||||  | |||||| ||||| |||||||||| |||||     
T  34146820 atttataagaaacatttaacttttttgattcattaca-aaatgatgtatttgatatatattctagatcaaatacattaattattcaatgaatcaaaaaaa 34146918  T
Q  315 ttaaatttttcttataaataagatc 339  Q
    | || ||||||||||||||| ||||    
T  34146919 tcaattttttcttataaataggatc 34146943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 206 - 337
Target Start/End: Complemental strand, 6793736 - 6793605
Alignment:
Q  206 tccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaa 305  Q
    |||||||  ||||| |||||| |||| |||||| |||||||||||||||||||||||||||| ||||| | || || |  ||||| ||||| ||||||||    
T  6793736 tccggtcctatttaaaagaaacatttaacttttatgattcattgcataaatgatgtatttgacctataatatatactaagtacattaattattcaatgaa 6793637  T
Q  306 tctaaaaagttaaatttttcttataaataaga 337  Q
    | |||||| |||| ||||||||||||||||||    
T  6793636 tttaaaaaattaactttttcttataaataaga 6793605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 199 - 349
Target Start/End: Original strand, 29256600 - 29256747
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||| ||||||||  |||||||||||| ||||   |||||||||||||||||||||||||||||||| ||| |||| || || | | |||| ||||| |    
T  29256600 tacttactccggtcctatttataagaaacatttt--ttttttgattcattgcataaatgatgtatttggtct-tattttataccaaaaacattaattact 29256696  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    ||||||||||||||||| || ||||||||||||||| || || ||||||||    
T  29256697 caatgaatctaaaaagtcaactttttcttataaataggaccggaggaagta 29256747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 34662830 - 34662696
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||| || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||||||||| |    
T  34662830 tactccctccggtcttatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattatt 34662732  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
     ||||||||||||||||||| ||||| |||||||||    
T  34662731 gaatgaatctaaaaagttaacttttttttataaata 34662696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 47678255 - 47678389
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||||||||| ||||||   || ||||||||||| |    
T  47678255 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttgatctat-ttctaggttaggtacatcaattatt 47678353  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
     ||||||||| |||||||||||||||||||||||||    
T  47678354 gaatgaatctcaaaagttaaatttttcttataaata 47678389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 640654 - 640530
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||||| |||| |||| | |||||| |||||||| |||||| ||||||||  |||||||| |||| ||||||||||||||| || ||||||||||||||    
T  640654 atttatatgaaacatttaatttttttcattcattgtataaattatgtatttagtctatattttagataagatacatcaattactc-atgaatctaaaaag 640556  T
Q  315 ttaaatttttcttataaataagatcg 340  Q
    | || |||||||||||||||| ||||    
T  640555 tcaattttttcttataaataaaatcg 640530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 199 - 306
Target Start/End: Complemental strand, 37179059 - 37178952
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||||||||||| |  | |||||||||| ||||||||||||||||| |||| |||||||||||||||  |||||||| |||||||||||||| |||||      
T  37179059 tacttcctccggccctaattataagaaacatttgacttttttgatttattgtataaatgatgtatttagtctatattttagacaagatacattaattaca 37178960  T
Q  299 caatgaat 306  Q
    ||||||||    
T  37178959 caatgaat 37178952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 199 - 331
Target Start/End: Complemental strand, 18744704 - 18744576
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  ||||| |||||| |||| |||||||| ||||||||||||||||||||| ||| |||||||||||||  | |||   |||||| |    
T  18744704 tactccctccggtcctatttaaaagaaacatttaactttttttattcattgcataaatgatgta-ttggtctatattctagatcaaata---caattatt 18744609  T
Q  299 caatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||||||||||||||| || ||||||||||||    
T  18744608 caatgaatctaaaaagtcaactttttcttataa 18744576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 47844663 - 47844548
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    ||||||||| | || ||||||||||||||||| |||  |||| |||||||||||| ||||||   || ||||||||||| | ||||||||| ||||||||    
T  47844663 tataagaaacaatttacttttttgattcattgaatagttgatatatttgatctat-ttctaggttaggtacatcaattattgaatgaatctcaaaagtta 47844565  T
Q  318 aatttttcttataaata 334  Q
    |||||||||||||||||    
T  47844564 aatttttcttataaata 47844548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 215 - 306
Target Start/End: Original strand, 15286024 - 15286115
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaat 306  Q
    |||||||||||| ||||||||||||| |||||||  |||||||||||||||||||||||||||| || |  ||||| ||||| |||||||||    
T  15286024 atttataagaaacatttgacttttttaattcattatataaatgatgtatttgatctatattctataccaagtacattaattattcaatgaat 15286115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 43929345 - 43929479
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||  |||  ||||||||||| ||||| |||||  | || ||||||||||| |    
T  43929345 tactccctccggtcctatatataagaaacaatttacttttttgattcattaaatagttgatgtatttggtctat-ttctaagctaggtacatcaattatt 43929443  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
     ||||||||||||||||||| |||||||||||||||    
T  43929444 gaatgaatctaaaaagttaactttttcttataaata 43929479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 39748616 - 39748684
Alignment:
Q  197 actacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtattt 265  Q
    |||||| |||| | ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39748616 actactccctcagatcttatttataagaaatatttgacttttttaattcattgcataaatgatgtattt 39748684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 334
Target Start/End: Original strand, 7375524 - 7375603
Alignment:
Q  255 atgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    |||| ||||||| | ||||||||||||||||||||| |||||  ||||||||||||||||| || |||||||||||||||    
T  7375524 atgaagtatttggtttatattctagacaagatacattaattacacaatgaatctaaaaagtcaattttttcttataaata 7375603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 357
Target Start/End: Complemental strand, 50155447 - 50155288
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||||||||||||  |||||||||||| | |||||||||| |||||||||  ||| ||||||||||| |||||| | ||||| | |||||||| |||      
T  50155447 tacttcctccggtcctatttataagaaaaagttgactttttagattcattgagtaattgatgtatttggtctataatatagaccaaatacatcatttatg 50155348  T
Q  299 caatgaa-tctaaaaagttaaatttttcttataaataagatcgaaggaagtagtagataa 357  Q
    ||||||| |  ||||| | |||| ||| ||||||||||||  |||| ||||| |||||||    
T  50155347 caatgaattaaaaaaaatcaaatatttattataaataagacggaagtaagtattagataa 50155288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 313
Target Start/End: Original strand, 5891725 - 5891839
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  ||||||||||||||||| |||||||| ||| |||||||| || ||||||||| | ||||||| | || | ||| || |||||||    
T  5891725 tactccctccggtcctatttataagaaatatttaacttttttaattaattgcatatataatgtatttggtttatattcaataccaaatatattaattaat 5891824  T
Q  299 caatgaatctaaaaa 313  Q
    |||||||| ||||||    
T  5891825 caatgaatataaaaa 5891839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 23923470 - 23923408
Alignment:
Q  272 tattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||||||||||||||||||| |||| ||||||||||| | ||||||||||||||||||    
T  23923470 tattctagacaagatacatcaattattcaacgaatctaaaaattcaaatttttcttataaata 23923408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 337
Target Start/End: Original strand, 26070823 - 26070961
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||| |||||||||  | |||||||||||| |||||||||  ||| |||||||| | ||||| | | ||||| | |||||| | |||      
T  26070823 tactccctccggtcttatttataagtgaaatttgactttttagattcattgagtaattgatgtatcttatctagaatatagaccaaatacattatttatg 26070922  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataaga 337  Q
    ||||||||| ||||||| |||| ||||||||||||||||    
T  26070923 caatgaatcaaaaaagtaaaatgtttcttataaataaga 26070961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 349
Target Start/End: Complemental strand, 38040425 - 38040275
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||||||||||||  |||||||||||| |||||||||||| |||||||||  ||| |||||||| |  |||| | | ||||  | ||| |||| |||      
T  38040425 tacttcctccggtcctatttataagaaaaatttgactttttagattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatg 38040326  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    ||||||||| ||||||| |||| ||||||||||||| || |||||| ||||    
T  38040325 caatgaatcaaaaaagtcaaatgtttcttataaataggaccgaagggagta 38040275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 52427346 - 52427412
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtattt 265  Q
    |||| |||||||||| ||| ||||||||  |||||||||||||||||||||||||||||||||||||    
T  52427346 tactccctccggtcttattcataagaaacgtttgacttttttgattcattgcataaatgatgtattt 52427412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 237 - 340
Target Start/End: Complemental strand, 26823248 - 26823145
Alignment:
Q  237 ttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataag 336  Q
    |||||||| ||||||| ||||||||| ||  |||||||||||||  ||||  |||||||| ||||| ||| ||||||||||| ||||| ||||||||| |    
T  26823248 ttttgatttattgcattaatgatgtacttcgtctatattctagattagatgtatcaattattcaataaatttaaaaagttaattttttattataaatagg 26823149  T
Q  337 atcg 340  Q
    ||||    
T  26823148 atcg 26823145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 334
Target Start/End: Original strand, 34332472 - 34332610
Alignment:
Q  196 gactacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaatt 295  Q
    ||||||| |||||  ||| || |||||||||  ||||||||||| |||||||||  ||| ||||||||||  |||| | | ||||| | |||||||| ||    
T  34332472 gactactccctccaatcttatatataagaaaactttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcattt 34332571  T
Q  296 aatcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    |  ||||||||| ||||||| |||| |||||||||||||    
T  34332572 atccaatgaatcaaaaaagtcaaatgtttcttataaata 34332610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 199 - 332
Target Start/End: Complemental strand, 37096243 - 37096110
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||| |||  |||||||  ||| ||||||||||| ||||||||| ||||||||||||| ||||||||    ||||| |||||||||  | | |    
T  37096243 tactccctccgatctcgtttataaacaatttttgactttttagattcattgaataaatgatgtatgtgatctatgacatagactagatacatctttcatt 37096144  T
Q  299 caatgaatctaaaaagttaaatttttcttataaa 332  Q
    ||||||| ||| |||||||||||||  |||||||    
T  37096143 caatgaacctacaaagttaaattttgtttataaa 37096110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 335
Target Start/End: Complemental strand, 34146937 - 34146818
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| | |||| ||||||||||||||| |||| | |||||||||||||| | | || |  | |||||||| ||  | |||||||| ||||||    
T  34146937 atttataagaaaaaattgatttttttgattcattgaataattaatgtatttgatctagaatatatatcaaatacatcattttgt-aatgaatcaaaaaag 34146839  T
Q  315 ttaaatttttcttataaataa 335  Q
    |||||| ||||||||||||||    
T  34146838 ttaaatgtttcttataaataa 34146818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 349
Target Start/End: Original strand, 15285466 - 15285585
Alignment:
Q  230 ttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttat 329  Q
    |||| ||||| |||| |||| |||| |||||||| ||||| |||||| |||  | |||||||||||| ||||| |||||||||| | || | | ||||||    
T  15285466 ttgaatttttagatttattgaataattgatgtatctgatccatattcaagatcaaatacatcaattattcaatcaatctaaaaaatcaagtgtctcttat 15285565  T
Q  330 aaataagatcgaaggaagta 349  Q
    ||||| ||||||| ||||||    
T  15285566 aaatatgatcgaaagaagta 15285585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 331
Target Start/End: Complemental strand, 18038819 - 18038705
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||| ||| |||||||||||| |||||||||  ||| |||||||| | ||||| |||    || |||||||||| |||| ||||||| |||||||||     
T  18038819 ttataaaaaacatttgactttttagattcattgtttaagtgatgtatctaatctacatttataacgagatacatcacttaagcaatgaacctaaaaagtc 18038720  T
Q  317 aaatttttcttataa 331  Q
    |||| ||||||||||    
T  18038719 aaatatttcttataa 18038705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 332
Target Start/End: Original strand, 2855100 - 2855217
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| | ||||||||||  ||| |||| | | ||||| |||||||| |||||| |||||  |||| ||||||||| |||||||| |||||||    
T  2855100 atttataagaaacaattgactttttaaatttattgaagagatgatttatttgatatatattttagacgggatatatcaattaaacaatgaatttaaaaag 2855199  T
Q  315 ttaaatttttcttataaa 332  Q
    | || | ||| |||||||    
T  2855200 tcaattgttttttataaa 2855217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 343
Target Start/End: Complemental strand, 38738064 - 38737936
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| |||| ||||||| |||||||||  ||| |||||||| |  |||| | | || || | |||||||  |||  ||||||||| ||||||    
T  38738064 atttataagaaaaatttaactttttagattcattgagtaattgatgtatcttgtctagaatataaaccaaatacatcctttatgcaatgaatcaaaaaag 38737965  T
Q  315 ttaaatttttcttataaataagatcgaag 343  Q
    | |||| ||||||||||||| ||||||||    
T  38737964 tcaaatgtttcttataaataggatcgaag 38737936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 206 - 334
Target Start/End: Original strand, 49944839 - 49944967
Alignment:
Q  206 tccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaa 305  Q
    |||||||  |||||||||||| |||| ||||||| ||||||||| |||| |||||||| |  |||| | | ||||| | |||||||| |||  |||||||    
T  49944839 tccggtcctatttataagaaaaatttaactttttagattcattgaataattgatgtatcttgtctagaatatagaccaaatacatcatttatacaatgaa 49944938  T
Q  306 tctaaaaagttaaatttttcttataaata 334  Q
    || ||||| | |||| |||||| ||||||    
T  49944939 tcaaaaaaatcaaatgtttcttgtaaata 49944967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 262
Target Start/End: Original strand, 2351148 - 2351195
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgta 262  Q
    |||||||||||| |||| ||||||||||||||||||||||||| ||||    
T  2351148 atttataagaaacatttaacttttttgattcattgcataaatgttgta 2351195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 331
Target Start/End: Original strand, 18038705 - 18038819
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtat-ttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    ||||||||||||||||||||||| | |||||||| ||| |||||||| | | | || | | ||||  |||||||||| |||| |||||||||||||||||    
T  18038705 ttataagaaatatttgactttttaggttcattgcttaagtgatgtatctcgttata-aatgtagattagatacatcacttaaacaatgaatctaaaaagt 18038803  T
Q  316 taaatttttcttataa 331  Q
     |||| ||| ||||||    
T  18038804 caaatgttttttataa 18038819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 26924212 - 26924347
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||||||| | ||||||||||  ||||||||  | | | ||||| ||| | || | | ||||| | |||||||| ||| |    
T  26924212 tactccctccggtcctatttataagaaaaagttgactttttaaattcattgagtcattaatgtacttggtatagaatatagaccaaatacatcatttatt 26924311  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||| ||||||| |||| |||||||||||||    
T  26924312 caatgaatcaaaaaagtcaaatgtttcttataaata 26924347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 312
Target Start/End: Complemental strand, 31362526 - 31362455
Alignment:
Q  241 gattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaa 312  Q
    ||||||||| |||| |||||||| || || ||||| |||||||||||||||| ||||||||| || ||||||    
T  31362526 gattcattgaataattgatgtatatggtccatattatagacaagatacatcagttaatcaataaagctaaaa 31362455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 334
Target Start/End: Original strand, 11386159 - 11386288
Alignment:
Q  205 ctccggtctaatttataagaaatatttgactttttt-gattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatg 303  Q
    |||||||||  ||||||||||| | |||| |||||| ||||||||| |||| |||||| | || |||| | | ||||| | |||||||| |||  |||||    
T  11386159 ctccggtcttttttataagaaaaaattgatttttttagattcattgaataattgatgtttctggtctagaatatagacgaaatacatcatttatgcaatg 11386258  T
Q  304 aatctaaaaagttaaatttttcttataaata 334  Q
    |||| ||||||| |||| |||||||||||||    
T  11386259 aatc-aaaaagtcaaatgtttcttataaata 11386288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 331
Target Start/End: Complemental strand, 28038938 - 28038840
Alignment:
Q  233 acttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||||| ||||||||   ||||||||||||||  | |||||| | ||| | ||||| || ||||| ||||||||||||||||||| |||| |||||||    
T  28038938 actttttagattcatttattaaatgatgtatttagtttatattattgaccaaatacaacatttaatgaatgaatctaaaaagttaatttttgcttataa 28038840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 7375197 - 7375238
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaat 256  Q
    |||||||| ||||||||||||||||||| |||||||||||||    
T  7375197 atttataaaaaatatttgacttttttgaatcattgcataaat 7375238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 312
Target Start/End: Complemental strand, 9002838 - 9002761
Alignment:
Q  235 ttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaa 312  Q
    ||||| ||||||||  ||||||||||||| |||||| |||| ||||||| |||||||| ||| | |||| ||||||||    
T  9002838 tttttagattcatttaataaatgatgtatgtgatctttattgtagacaacatacatcatttattgaatgcatctaaaa 9002761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 337
Target Start/End: Complemental strand, 45849003 - 45848950
Alignment:
Q  284 gatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataaga 337  Q
    ||||||||||||| | ||||||| ||||||||||| | ||||||||||||||||    
T  45849003 gatacatcaattattaaatgaatataaaaagttaattgtttcttataaataaga 45848950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 10506291 - 10506347
Alignment:
Q  277 tagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaat 333  Q
    ||||||| ||||||||| || |||||||||||||||||| ||||||| |||| ||||    
T  10506291 tagacaaaatacatcaactattcaatgaatctaaaaagtaaaattttacttaaaaat 10506347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 343
Target Start/End: Original strand, 23923565 - 23923693
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| |||||| ||||| |||||||||  ||| | |||||| |  |||| | | ||||| | || ||||| |||  |||||||||  |||||    
T  23923565 atttataagaaaaatttgaatttttagattcattgagtaattaatgtatattgtctagaatatagaccaaatgcatcatttatgcaatgaatcagaaaag 23923664  T
Q  315 ttaaatttttcttataaataagatcgaag 343  Q
    | || |||||||||||||||||| |||||    
T  23923665 taaattttttcttataaataagaccgaag 23923693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 349
Target Start/End: Original strand, 26545030 - 26545146
Alignment:
Q  233 acttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaa 332  Q
    ||||||| ||||||||  |||| | ||||||||| | ||  |||| ||| ||||||||  |||| |||||| ||||||||||| || ||| |||| ||||    
T  26545030 actttttagattcattaaataatttatgtatttggtttaagttcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttgtaaa 26545129  T
Q  333 taagatcgaaggaagta 349  Q
    ||||| || ||||||||    
T  26545130 taagaccggaggaagta 26545146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 275
Target Start/End: Original strand, 9387259 - 9387298
Alignment:
Q  236 tttttgattcattgcataaatgatgtatttgatctatatt 275  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  9387259 ttttttattcattacataaatgatgtatttgatctatatt 9387298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 14647011 - 14647062
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttg 266  Q
    |||||||||||| ||||  |||||||||||||||| ||||||| ||||||||    
T  14647011 atttataagaaacatttaccttttttgattcattgtataaatggtgtatttg 14647062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 316
Target Start/End: Complemental strand, 15290689 - 15290606
Alignment:
Q  233 acttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    ||||||| ||||||||  |||||||||||||||| || ||| | ||||| | |||||||| ||||| |||||| ||| ||||||    
T  15290689 actttttagattcatttaataaatgatgtatttggtcaataatatagactaaatacatcatttaatgaatgaacctacaaagtt 15290606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 334
Target Start/End: Original strand, 18744576 - 18744689
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| | |||||||||| ||||||||| |||| ||   ||||||||||| | | ||||| | |||||||| |||  ||||||||  ||||||||    
T  18744576 ttataagaaaaagttgactttttagattcattgaataattg---tatttgatctagaatatagacca-atacatcatttatgcaatgaataaaaaaagtt 18744671  T
Q  317 aaatttttcttataaata 334  Q
    |||| |||||| ||||||    
T  18744672 aaatgtttcttttaaata 18744689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 26760322 - 26760187
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||||||| | |||| |||||  ||||||||  | | | ||||| ||| | || | | ||||| | |||||||| ||| |    
T  26760322 tactccctccggtcctatttataagaaaaaattgattttttaaattcattgagtcattaatgtacttggtatagaatatagaccaaatacatcatttatt 26760223  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||| ||||||| |||| |||||||||||||    
T  26760222 caatgaatcaaaaaagtcaaatgtttcttataaata 26760187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 331
Target Start/End: Original strand, 41007725 - 41007804
Alignment:
Q  252 taaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    |||||||||||| || |||||| |  |||| | |||||||| ||||| ||||||||||||| ||| |||||| |||||||    
T  41007725 taaatgatgtatgtggtctataataaagaccacatacatcatttaatgaatgaatctaaaatgttgaattttgcttataa 41007804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 334
Target Start/End: Complemental strand, 44939199 - 44939080
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||| | | |||| ||||| |||||||||  ||| |||||||| | ||||| | | ||||| | |||||||| |||  ||||||||  ||||||    
T  44939199 atttataagagaaaattgattttttagattcattgagtaattgatgtatctaatctagaatatagaccaaatacatcatttatacaatgaataaaaaaag 44939100  T
Q  315 ttaaatttttcttataaata 334  Q
    | |||| |||||||||||||    
T  44939099 tcaaatgtttcttataaata 44939080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 335
Target Start/End: Complemental strand, 47884075 - 47883976
Alignment:
Q  236 tttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataa 335  Q
    |||||| || |||| |||||| || |||||  |||||||  || | ||||||||||||||| | ||| ||| |||||||| || ||||||||||||||||    
T  47884075 tttttggttaattgtataaataatttattttgtctatatcttaaataagatacatcaattactaaattaatttaaaaagtcaattttttcttataaataa 47883976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 2351182 - 2351132
Alignment:
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    ||||||||| |||||||||||| ||||||||||||| ||||| ||| ||||    
T  2351182 caatgaatcaaaaaagttaaatgtttcttataaataggatcggagggagta 2351132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 5368854 - 5368904
Alignment:
Q  284 gatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||| ||||| |||||| |||||||||||||| |||| ||||||||||    
T  5368854 gatacattaattattcaatgcatctaaaaagttaatttttgcttataaata 5368904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 331
Target Start/End: Original strand, 28038856 - 28038954
Alignment:
Q  233 acttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||||| ||||||||   |||||| |||||||| || ||| | || || | |||||||| ||||| ||||||||||||||||| | |||| |||||||    
T  28038856 actttttagattcattcattaaatgttgtatttggtcaataatataaactaaatacatcatttaataaatgaatctaaaaagttgatttttgcttataa 28038954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 29256747 - 29256697
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattg 249  Q
    ||||||||||||||  |||||||||||| | |||||||||| |||||||||    
T  29256747 tacttcctccggtcctatttataagaaaaagttgactttttagattcattg 29256697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 331
Target Start/End: Complemental strand, 31050381 - 31050267
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| | |||||||||| | || ||||  ||| ||||||||||  ||||||||    |||| |||||| |||||  |||||||||||||||||     
T  31050381 ttataagaaacaattgactttttaggtttattgtgtaagtgatgtatttagtctatatttacaacaaaatacattaattacacaatgaatctaaaaagtc 31050282  T
Q  317 aaatttttcttataa 331  Q
    |||  ||||||||||    
T  31050281 aaaagtttcttataa 31050267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 331
Target Start/End: Complemental strand, 34491253 - 34491211
Alignment:
Q  289 atcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    |||| ||||| ||||||||||||| ||||||||||||||||||    
T  34491253 atcatttaatgaatgaatctaaaatgttaaatttttcttataa 34491211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 334
Target Start/End: Complemental strand, 47946117 - 47946015
Alignment:
Q  232 gacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    |||||||| | ||||||| |||| | |||||| || ||| |||||||||   ||||||  ||||| | |||||||||||||||| ||  |||||||||||    
T  47946117 gactttttaggttcattggataatttatgtatgtggtctttattctagatcggatacaataattatttaatgaatctaaaaagtcaagcttttcttataa 47946018  T
Q  332 ata 334  Q
    |||    
T  47946017 ata 47946015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 318
Target Start/End: Complemental strand, 48636834 - 48636744
Alignment:
Q  228 atttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaa 318  Q
    |||||||||||| | ||||||   | ||||||||||||||| |||||| ||||| | |||||||| | | | |||||| ||||||||||||    
T  48636834 atttgactttttaggttcattcagttaatgatgtatttgatttatattatagaccacatacatcattgattgaatgaacctaaaaagttaa 48636744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 334
Target Start/End: Complemental strand, 25021294 - 25021245
Alignment:
Q  285 atacatcaattaatcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    |||||||||||| |||||||||||||||||| |  | |||||||||||||    
T  25021294 atacatcaattattcaatgaatctaaaaagtcatttgtttcttataaata 25021245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 33765837 - 33765914
Alignment:
Q  254 aatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    |||||||||| || ||| |||| ||||| | |||||||| ||||| ||||||||||||| ||| | |||| |||||||    
T  33765837 aatgatgtatatggtctttattatagaccacatacatcatttaataaatgaatctaaaatgttgatttttgcttataa 33765914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 312
Target Start/End: Original strand, 8984220 - 8984296
Alignment:
Q  236 tttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaa 312  Q
    |||| ||||||||  ||||||||||||| || ||| |||| ||||||| ||| |||| ||| | |||||||||||||    
T  8984220 ttttagattcattcaataaatgatgtatgtggtctttattgtagacaacataaatcatttattgaatgaatctaaaa 8984296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 316
Target Start/End: Original strand, 15290626 - 15290690
Alignment:
Q  252 taaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    ||||||||||||||  |||||||| | ||| | |||||||| ||| | |||||||||||||||||    
T  15290626 taaatgatgtatttagtctatattattgaccaaatacatcatttattaaatgaatctaaaaagtt 15290690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 15351823 - 15351747
Alignment:
Q  236 tttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaa 312  Q
    |||| ||||||||  ||||||||||||| || ||| |||| ||||||| |||||||| ||| | ||||||| |||||    
T  15351823 ttttagattcattcaataaatgatgtatgtggtctttattgtagacaacatacatcatttattgaatgaatttaaaa 15351747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 20273231 - 20273163
Alignment:
Q  233 acttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaa 301  Q
    |||||||| |||||||| |||||||||||||    |||||| | ||||| |||||||||||||| ||||    
T  20273231 acttttttaattcattgaataaatgatgtatccagtctataatatagaccagatacatcaattactcaa 20273163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 23392587 - 23392655
Alignment:
Q  254 aatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaattt 322  Q
    |||||||||| ||||| ||||| || || | |||||||||| | | |||||||||||||||| ||||||    
T  23392587 aatgatgtatatgatcaatattataaaccacatacatcaataattaaatgaatctaaaaagtaaaattt 23392655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 29064184 - 29064224
Alignment:
Q  235 ttttttgattcattgcataaatgatgtatttgatctatatt 275  Q
    ||||| ||||||||| ||||||||||||||| |||||||||    
T  29064184 tttttagattcattgtataaatgatgtatttaatctatatt 29064224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 39748687 - 39748615
Alignment:
Q  280 acaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagtagta 352  Q
    |||| |||||||| |||  ||||||||  ||||||| |||| ||||||||||||||||||  ||| |||||||    
T  39748687 acaaaatacatcatttatgcaatgaattaaaaaagtcaaatatttcttataaataagatctgagggagtagta 39748615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 47991867 - 47991799
Alignment:
Q  254 aatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaattt 322  Q
    |||||||||| ||||||||||| | ||| | |||||||| | ||| |||||| ||||||||| ||||||    
T  47991867 aatgatgtatgtgatctatattatggaccacatacatcattaaatgaatgaacctaaaaagtcaaattt 47991799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 95)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 215 - 334
Target Start/End: Complemental strand, 48361185 - 48361066
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||    
T  48361185 atttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatctaaaaag 48361086  T
Q  315 ttaaatttttcttataaata 334  Q
    | ||||||||||||||||||    
T  48361085 tcaaatttttcttataaata 48361066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 48196039 - 48195904
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||||||||||||  |||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |    
T  48196039 tacttcctccggtcctatttataagaaacatttgacttttttggttcattgcataaatgatgtatttggtctatattctagacaagatacgtcaattact 48195940  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    |||||||| ||||||||||  |||||||||||||||    
T  48195939 caatgaatttaaaaagttagttttttcttataaata 48195904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 8347794 - 8347659
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||| | |||||||| || |||| |||||||||| | |    
T  8347794 tacttcctccggtctaatttataagaaacatttgactttttttattcattgtataaatgatgtattcggtctatattttatacaaaatacatcaatcact 8347695  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||||||||||| ||||||||||||||||||    
T  8347694 caatgaatctaaaaagtcaaatttttcttataaata 8347659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 25477560 - 25477679
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||| |||||||    
T  25477560 atttataaaaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctacacaaaatacatcaattactcaatgaatttaaaaag 25477659  T
Q  315 ttaaatttttcttataaata 334  Q
    | ||| ||||||||||||||    
T  25477660 tcaaaattttcttataaata 25477679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 30192045 - 30191910
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |    
T  30192045 tactccctccggtcgtatttataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattact 30191946  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||||||||| | || |||||||||||||||    
T  30191945 caatgaatctaaaaaatcaattttttcttataaata 30191910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 199 - 350
Target Start/End: Original strand, 44111744 - 44111895
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||||||| ||||||||||||||||| ||| ||||||||||||||||| ||||||||||| | ||||||||||||||| |    
T  44111744 tactccctccggtcctatttataagaaacatttgacttttttgattaattacataaatgatgtatttggtctatattctaaagaagatacatcaattact 44111843  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagtag 350  Q
    ||||||||||||||||| || |||||||||||||||||| || ||| |||||    
T  44111844 caatgaatctaaaaagtcaactttttcttataaataagaccggagggagtag 44111895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 215 - 349
Target Start/End: Complemental strand, 50121570 - 50121436
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||||||||||||||| | ||||| |||||||||||    
T  50121570 atttataagaaacatttgacttttttaattcattgcataaatgatatatttggtctatatactagacaagatacatcaatcattcaataaatctaaaaag 50121471  T
Q  315 ttaaatttttcttataaataagatcgaaggaagta 349  Q
    | ||||||||||||||||||||| |||||| ||||    
T  50121470 tcaaatttttcttataaataagaccgaagggagta 50121436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 199 - 338
Target Start/End: Complemental strand, 4386285 - 4386146
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||||||||| || | |||||||||||| ||||||||||||||||||||| ||||||||||||||||  |||||||| |||| || |||||||||||| |    
T  4386285 tacttcctccagttttatttataagaaaaatttgacttttttgattcattacataaatgatgtatttagtctatattgtagataaaatacatcaattact 4386186  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagat 338  Q
     ||||||| |||||||| ||||||||||||||||||||||    
T  4386185 taatgaatttaaaaagtcaaatttttcttataaataagat 4386146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 199 - 337
Target Start/End: Complemental strand, 3163044 - 3162906
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||||| |||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| || |||||      
T  3163044 tacttcttccggtcttatttataaaaaacatttgacttttttgattcattgcataaatgatgtattgagtctatattctagacaagatatattaattaca 3162945  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataaga 337  Q
    |||||||| |||||||| || ||||||||||||||||||    
T  3162944 caatgaatttaaaaagtcaattttttcttataaataaga 3162906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 215 - 337
Target Start/End: Original strand, 36132650 - 36132772
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||||||||| || |||||| |||| |||||    
T  36132650 atttataagaaatatttgacttttttgattcattgtataaatgatgtatttagtctatattcaagacaagatacatcaactactcaatgtatcttaaaag 36132749  T
Q  315 ttaaatttttcttataaataaga 337  Q
    | || ||||||||||||||||||    
T  36132750 tcaattttttcttataaataaga 36132772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 215 - 349
Target Start/End: Complemental strand, 42670897 - 42670763
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| |||||||||||| ||||||||||||||||||| |||||| ||||||||||| || |||||||| |||||  ||||||||| ||||||    
T  42670897 atttataagaaacatttgactttttagattcattgcataaatgatatatttggtctatattctaaacgagatacattaattacacaatgaatcaaaaaag 42670798  T
Q  315 ttaaatttttcttataaataagatcgaaggaagta 349  Q
    |||| ||||||||||||||| ||||| | ||||||    
T  42670797 ttaactttttcttataaataggatcggaagaagta 42670763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 228 - 334
Target Start/End: Original strand, 42169071 - 42169177
Alignment:
Q  228 atttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttctt 327  Q
    ||||||||||||||||||||| ||||||||||||||||| || |||||| |||||| |||||||||||| ||||| |||||||||||| |||||||||||    
T  42169071 atttgacttttttgattcattacataaatgatgtatttggtccatattcaagacaaaatacatcaattattcaataaatctaaaaagtcaaatttttctt 42169170  T
Q  328 ataaata 334  Q
    |||||||    
T  42169171 ataaata 42169177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 16412364 - 16412248
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    ||||||||||||||||||| |||||  |||||||||||| ||||||||| |||||||||||||| | ||| |||||||| |||||||||||||||||| |    
T  16412364 tataagaaatatttgacttctttgacacattgcataaataatgtatttggtctatattctagaccaaatatatcaattattcaatgaatctaaaaagtca 16412265  T
Q  318 aatttttcttataaata 334  Q
    | |||||||||||||||    
T  16412264 attttttcttataaata 16412248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 215 - 311
Target Start/End: Original strand, 35429788 - 35429884
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaa 311  Q
    |||||||||||||||||||||||||| |||| ||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  35429788 atttataagaaatatttgactttttttattcgttgcataaaagatgtatttggtctatattctagacaagatacatcaattactcaattaatctaaa 35429884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 215 - 348
Target Start/End: Complemental strand, 41116694 - 41116562
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||||||||||  ||| | |||||| ||| |||| |||||| ||||||||| |||||||| |||| ||||||||||||||| |||||||||||||||||    
T  41116694 atttataagaaacttttcattttttttatttattgtataaat-atgtatttggtctatattttagataagatacatcaattactcaatgaatctaaaaag 41116596  T
Q  315 ttaaatttttcttataaataagatcgaaggaagt 348  Q
    |||||||||||||||||||| || || |||||||    
T  41116595 ttaaatttttcttataaataggaccggaggaagt 41116562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 199 - 315
Target Start/End: Original strand, 17284734 - 17284850
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  ||||||||  ||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||      
T  17284734 tactccctccggtcctatttataatgaatatttgatttttttgattcattgcataaatgatgtatgtggtctatattctagacaagatacatcaattata 17284833  T
Q  299 caatgaatctaaaaagt 315  Q
    |||| ||| ||||||||    
T  17284834 caataaatttaaaaagt 17284850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 21554124 - 21554242
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |  | |||||| ||||| ||||||||||||||||     
T  21554124 atttataaaaaatatttgactttttcgattcattgcataaatgatgtatttggtctatattctatatca-atacattaattactcaatgaatctaaaaaa 21554222  T
Q  315 ttaaatttttcttataaata 334  Q
    | || |||||||||||||||    
T  21554223 tcaactttttcttataaata 21554242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 55951670 - 55951777
Alignment:
Q  208 cggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatc 307  Q
    |||||| |||||||| ||||||||||||||||| |||| ||  |||||||||||||||||| ||||||| ||||||||||||| ||||||||||| ||||    
T  55951670 cggtcttatttataataaatatttgacttttttaattcgttatataaatgatgtatttgatttatattcaagacaagatacattaattaatcaataaatc 55951769  T
Q  308 taaaaagt 315  Q
    ||||||||    
T  55951770 taaaaagt 55951777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 206 - 312
Target Start/End: Original strand, 32714275 - 32714381
Alignment:
Q  206 tccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaa 305  Q
    |||||| | |||||||||||| ||||||||||||||||||||| ||||||||||||||||  |||||||||||||||| |||||||||| | | ||||||    
T  32714275 tccggttttatttataagaaacatttgacttttttgattcattacataaatgatgtatttagtctatattctagacaaaatacatcaatcattgaatgaa 32714374  T
Q  306 tctaaaa 312  Q
    |||||||    
T  32714375 tctaaaa 32714381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 215 - 313
Target Start/End: Complemental strand, 45096707 - 45096609
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    |||||||| ||| ||||||||||||||||| |||||||||||||| |||||| |||||| |||||||||||||||||||||| ||||| ||||||||||    
T  45096707 atttataaaaaacatttgacttttttgatttattgcataaatgatatatttggtctataatctagacaagatacatcaattattcaataaatctaaaaa 45096609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 228 - 334
Target Start/End: Original strand, 53225672 - 53225778
Alignment:
Q  228 atttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttctt 327  Q
    |||| |||||||||||||||||||||||||||||||||| |||| |||||| || | |||||| ||||| |||||||||||||||||| || ||||||||    
T  53225672 attttacttttttgattcattgcataaatgatgtatttggtctacattctataccaaatacattaattattcaatgaatctaaaaagtcaattttttctt 53225771  T
Q  328 ataaata 334  Q
    |||||||    
T  53225772 ataaata 53225778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 204 - 334
Target Start/End: Original strand, 53658368 - 53658498
Alignment:
Q  204 cctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatg 303  Q
    |||||||||  ||||||||||||||||| |||||||| |||||||| || ||| ||||||||| |||||||||||||||| |||||| | |||  ||||     
T  53658368 cctccggtcatatttataagaaatatttaactttttttattcattgtatgaataatgtatttggtctatattctagacaaaatacattagttatacaata 53658467  T
Q  304 aatctaaaaagttaaatttttcttataaata 334  Q
    |||||||||| |||| |||||||||||||||    
T  53658468 aatctaaaaaattaactttttcttataaata 53658498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 215 - 344
Target Start/End: Original strand, 45828430 - 45828559
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||| |||||||||| ||||||||||| || ||||||||||||||||| | |||||| ||||| | |||||| ||||| ||||||||||||||||     
T  45828430 atttataaaaaatatttgatttttttgattctttacataaatgatgtatttggtttatattatagaccaaatacattaattactcaatgaatctaaaaaa 45828529  T
Q  315 ttaaatttttcttataaataagatcgaagg 344  Q
    | || ||||||||||||||| || ||||||    
T  45828530 tcaattttttcttataaataggaccgaagg 45828559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 219 - 313
Target Start/End: Original strand, 9044406 - 9044500
Alignment:
Q  219 ataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||  ||||||||||||||| |||||||||||| ||||| |||| |||||    
T  9044406 ataagaaatatttgacttttttgattcattgtataaatgatgtctttggcctatattctagacaaaatacatcaattactcaataaatccaaaaa 9044500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 334
Target Start/End: Original strand, 44061388 - 44061521
Alignment:
Q  200 acttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatc 299  Q
    ||||| |||||||  ||||||||||||  ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||  |||||  |    
T  44061388 acttcttccggtcatatttataagaaacgtttgagttttttgattcattgcataaataatgtatttggtctatattctagacaagatacactaattacac 44061487  T
Q  300 aatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||| |||||| |  | |||||||||||||||    
T  44061488 aatgaatttaaaaa-tcgattttttcttataaata 44061521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 215 - 337
Target Start/End: Complemental strand, 46434231 - 46434110
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||||||||||||||||||||||| |||||||||| |||||| | |||||||||||||||||| |||| ||| || ||||| | || ||||||||||||    
T  46434231 atttataagaaatatttgacttttt-gattcattgcttaaatggtatatttgatctatattctaaacaatatatattaattacttaaagaatctaaaaag 46434133  T
Q  315 ttaaatttttcttataaataaga 337  Q
    | |||| ||| ||||||||||||    
T  46434132 tcaaatattttttataaataaga 46434110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 199 - 344
Target Start/End: Complemental strand, 47943876 - 47943731
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||| ||||||||  || ||||||| ||||||||||||||||||||||||||||||  |||||||| || || |  ||||| ||||| |    
T  47943876 tactccctccggtcttatttataaataacatttgacatttttgattcattgcataaatgatgtatttagtctatattttataccaagtacattaattact 47943777  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaagg 344  Q
    |||| |||||||||||| || |||||| |||||||| || ||||||    
T  47943776 caattaatctaaaaagtcaattttttcatataaataggaccgaagg 47943731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 47866184 - 47866050
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||||||||| |    
T  47866184 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattatt 47866086  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
     ||||||||||||||||||| |||||||||||||||    
T  47866085 gaatgaatctaaaaagttaactttttcttataaata 47866050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 43117867 - 43117988
Alignment:
Q  215 atttataagaaatatttgactttttt--gattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaa 312  Q
    ||||||| ||||||||| ||||||||  |||| ||||||||||||||||||||| |||||||| || || | |||||||||||| ||||||||| |||||    
T  43117867 atttatatgaaatatttaacttttttttgatttattgcataaatgatgtatttggtctatattttataccaaatacatcaattattcaatgaatgtaaaa 43117966  T
Q  313 agttaaatttttcttataaata 334  Q
    | | || |||||||||||||||    
T  43117967 aatcaattttttcttataaata 43117988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 229 - 334
Target Start/End: Original strand, 696379 - 696484
Alignment:
Q  229 tttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttctta 328  Q
    |||||||||||||||||||||||||||||||| ||||  ||||||||||| ||||||||||| |||||   ||| ||||| |||| |||| |||||||||    
T  696379 tttgacttttttgattcattgcataaatgatggatttagtctatattctaaacaagatacattaattatataataaatcttaaaaattaactttttctta 696478  T
Q  329 taaata 334  Q
    ||||||    
T  696479 taaata 696484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 229 - 334
Target Start/End: Original strand, 764677 - 764782
Alignment:
Q  229 tttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttctta 328  Q
    |||||||||||||||||||||||||||||||| ||||  ||||||||||| ||||||||||| |||||   ||| ||||| |||| |||| |||||||||    
T  764677 tttgacttttttgattcattgcataaatgatggatttagtctatattctaaacaagatacattaattatataataaatcttaaaaattaactttttctta 764776  T
Q  329 taaata 334  Q
    ||||||    
T  764777 taaata 764782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 20459259 - 20459374
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||||||||| | ||||||||||||||||||    
T  20459259 tataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaagtta 20459357  T
Q  318 aatttttcttataaata 334  Q
    | |||||||||||||||    
T  20459358 actttttcttataaata 20459374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 20745331 - 20745465
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||| ||| | || ||||||||||||||||| |||  ||||||||||||||||| |||||| | || ||||||||||| |    
T  20745331 tactccctccggtcctatatataaaaaacaatttacttttttgattcattgaatagttgatgtatttgatctat-ttctaggctaggtacatcaattatt 20745429  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
     |||||||||||||| |||| |||||||||||||||    
T  20745430 gaatgaatctaaaaaattaactttttcttataaata 20745465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 334
Target Start/End: Complemental strand, 9894721 - 9894639
Alignment:
Q  252 taaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |   |||||||||||||||| || |||||||||||||||    
T  9894721 taaatgatgtatttgatctatattctagacaagatacattaataacataatgaatctaaaaagtcaactttttcttataaata 9894639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 204 - 334
Target Start/End: Complemental strand, 43020899 - 43020770
Alignment:
Q  204 cctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatg 303  Q
    |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| ||||||   || ||||||||||| | ||||    
T  43020899 cctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggttaggtacatcaattattgaatg 43020801  T
Q  304 aatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||||||||| |||||||||||||||    
T  43020800 aatctaaaaagttaactttttcttataaata 43020770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 48361051 - 48361186
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||||||| |||||||||||| |||||||||  ||| ||||||||||  |||| | | ||||| | |||||||| |||      
T  48361051 tactccctccggtcctatttataagaaaaatttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatg 48361150  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||| ||||||| |||| |||||||||||||    
T  48361151 caatgaatcaaaaaagtcaaatgtttcttataaata 48361186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 218 - 344
Target Start/End: Complemental strand, 3043921 - 3043796
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    ||||||||| | || | ||||||||||||||| |||  ||||||||||| ||||| || ||||| || ||||||||||| | |||||||||||||| |||    
T  3043921 tataagaaacaatttatttttttgattcattgaatagttgatgtatttggtctatttt-tagactaggtacatcaattattgaatgaatctaaaaaatta 3043823  T
Q  318 aatttttcttataaataagatcgaagg 344  Q
    | ||||||||||||||| || ||||||    
T  3043822 actttttcttataaataggaccgaagg 3043796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 31977759 - 31977880
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatac--atcaattaatcaatgaatctaaaa 312  Q
    ||||||||||||||||||| |||||| |||| | ||||||||||| |||||| ||||||||||| ||   ||||  |||||||| |||||||||||||||    
T  31977759 atttataagaaatatttgattttttttattcctagcataaatgatatatttggtctatattctaaaccctatacatatcaattactcaatgaatctaaaa 31977858  T
Q  313 agttaaatttttcttataaata 334  Q
    ||   | |||||||||||||||    
T  31977859 agccgattttttcttataaata 31977880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 210 - 344
Target Start/End: Complemental strand, 33010812 - 33010678
Alignment:
Q  210 gtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatcta 309  Q
    |||| ||||||||||||| ||| | ||||||||||  ||  ||||||||||||||| || ||||||||| |||| ||| || |||||  |||| ||||||    
T  33010812 gtcttatttataagaaatgtttaatttttttgattttttttataaatgatgtatttaatatatattctaaacaaaatatattaattacacaattaatcta 33010713  T
Q  310 aaaagttaaatttttcttataaataagatcgaagg 344  Q
    |||| | || ||||||||||||||| |||||||||    
T  33010712 aaaaatcaattttttcttataaataggatcgaagg 33010678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 55190685 - 55190800
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    ||||||||| | || |||||||||||||| || |||| ||||||||||| ||||| |||||| | |||||||||||||| | ||||||| |||||| | |    
T  55190685 tataagaaacaatttacttttttgattcagtggataattgatgtatttggtctat-ttctaggctagatacatcaattattgaatgaatataaaaaatca 55190783  T
Q  318 aatttttcttataaata 334  Q
    | |||||||||||||||    
T  55190784 attttttcttataaata 55190800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 2583097 - 2583216
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||| ||||| ||| || |||| |||||||||||||||||||| |||||| |||||||| ||||||| ||| |  |||||  ||||||||||||||||    
T  2583097 atttattagaaacattcgatttttctgattcattgcataaatgatatatttggtctatattatagacaaaatataataattacacaatgaatctaaaaag 2583196  T
Q  315 ttaaatttttcttataaata 334  Q
    | |  |||| ||||||||||    
T  2583197 taatcttttccttataaata 2583216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 19150856 - 19150793
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattcta 278  Q
    |||||||||||| |||| ||||||| |||||||||||||||||||||||||| |||||||||||    
T  19150856 atttataagaaacattttactttttcgattcattgcataaatgatgtatttggtctatattcta 19150793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 42804404 - 42804270
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || | ||||||||||||||  |||  ||||||||||| ||||| ||||| |  || ||||||||||| |    
T  42804404 tactccctccggtcctatatataagaaacaatttatttttttgattcattaaatagttgatgtatttggtctat-ttctaaattaggtacatcaattatt 42804306  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
     ||||||||||||||||||| |||||||||||||||    
T  42804305 gaatgaatctaaaaagttaactttttcttataaata 42804270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 233 - 334
Target Start/End: Complemental strand, 26066484 - 26066383
Alignment:
Q  233 acttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaa 332  Q
    ||||||| ||||||||  |||| |||||||| || ||||||||||||||  ||||||||||||| |||||||||||  ||||| || | |||||||||||    
T  26066484 actttttagattcattaaataactgatgtatctggtctatattctagaccggatacatcaattattcaatgaatcttgaaagtcaattatttcttataaa 26066385  T
Q  333 ta 334  Q
    ||    
T  26066384 ta 26066383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 335
Target Start/End: Original strand, 4386151 - 4386271
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| ||||||||||||  |||||||   ||| |||||||||| ||||| | | ||||| | |||||||| |||   |||||||| ||||||    
T  4386151 atttataagaaaaatttgactttttaaattcattaagtaattgatgtattttatctacaatatagactaaatacatcatttatgtaatgaatcaaaaaag 4386250  T
Q  315 ttaaatttttcttataaataa 335  Q
    | |||||||||||||||||||    
T  4386251 tcaaatttttcttataaataa 4386271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 257 - 340
Target Start/End: Complemental strand, 23227041 - 23226958
Alignment:
Q  257 gatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataagatcg 340  Q
    |||||||||| ||||| || |||||||||||||| |||||   |||||||||||||||| || |||||||||||||||| ||||    
T  23227041 gatgtatttggtctattttttagacaagatacattaattacataatgaatctaaaaagtcaattttttcttataaataaaatcg 23226958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 30191911 - 30192030
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| | |||| ||||| |||||||||  ||| ||||||||||  |||| | | ||||| | |||||||| |||  ||||||||| ||||||    
T  30191911 atttataagaaaaaattgattttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaag 30192010  T
Q  315 ttaaatttttcttataaata 334  Q
    |||||| |||||||||||||    
T  30192011 ttaaatgtttcttataaata 30192030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 199 - 349
Target Start/End: Original strand, 40780249 - 40780396
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||  |||  |||||||||| |||||| || || || |||||||||||||| |    
T  40780249 tactccctccggtcctatatataagaaacaatttacttttttgattcattcaatagttgatgtatttaatctat-ttttaaactagatacatcaattatt 40780347  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
     ||| ||| |||||||||||  |||||||||||||| ||||| ||| ||||    
T  40780348 gaattaatttaaaaagttaa--ttttcttataaataggatcggaggtagta 40780396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 333
Target Start/End: Complemental strand, 14859802 - 14859720
Alignment:
Q  251 ataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaat 333  Q
    |||||||||||||||  | |||||| |||||||||||||||||||  |||||||||||||||  | |||||||| ||||||||    
T  14859802 ataaatgatgtatttagtatatattgtagacaagatacatcaatttctcaatgaatctaaaatatcaaatttttattataaat 14859720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 332
Target Start/End: Original strand, 28020496 - 28020609
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||||||||||||||| ||||||||||||     ||| |||||| |||||| ||||||||||| || | |||||| ||||| | ||| ||| |||||||    
T  28020496 atttataagaaatattttacttttttgatta----cattaatgatttatttggtctatattctatactaaatacattaattacttaataaatttaaaaag 28020591  T
Q  315 ttaaatttttcttataaa 332  Q
    | || |||||||||||||    
T  28020592 tcaactttttcttataaa 28020609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 349
Target Start/End: Original strand, 43141783 - 43141915
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| | || ||||||||| ||||||| |||| |||||||| | |||||||||    | ||||||||| ||||| || ||||| |||||||||     
T  43141783 ttataagaaacaattaacttttttggttcattgtataagtgatgtatctaatctatatttacaataagatacattaattattctatgaacctaaaaagtc 43141882  T
Q  317 aaatttttcttataaataagatcgaaggaagta 349  Q
    || ||||||||||||  |||| || ||||||||    
T  43141883 aactttttcttataataaagaccggaggaagta 43141915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 305
Target Start/End: Complemental strand, 41328755 - 41328671
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaa 305  Q
    ||||||||||||||||||||||||||||||||||||||      ||||||   | |||||| ||||||||||||||||||||  |||||||    
T  41328755 atttataagaaatatttgacttttttgattcattgcat------tgtattaagtttatattttagacaagatacatcaattacgcaatgaa 41328671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 233 - 315
Target Start/End: Complemental strand, 39897220 - 39897138
Alignment:
Q  233 acttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    ||||||| |||||||||||||  | |||||| ||||| ||||| ||||| |||||||||  ||| ||||||||||||||||||    
T  39897220 actttttagattcattgcatatctcatgtatctgatcaatattttagaccagatacatcggttattcaatgaatctaaaaagt 39897138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 283 - 349
Target Start/End: Complemental strand, 52536016 - 52535950
Alignment:
Q  283 agatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    ||||||||  |||| |||||| |||||||||||||| ||||||||||||||||||||| ||| ||||    
T  52536016 agatacatacattattcaatgtatctaaaaagttaactttttcttataaataagatcggagggagta 52535950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 340
Target Start/End: Complemental strand, 46462525 - 46462384
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| ||||||| || | ||||||| ||| ||| ||||||| | ||||||| ||||||||||||| |  ||| |||| || || | |||||||| ||| |    
T  46462525 tactccctccggcctcaattataagcaatttttcactttttaggttcattgaataaatgatgtatgtagtctttattataaaccatatacatcatttatt 46462426  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcg 340  Q
     |||||||||||||||| |||  || ||||||| ||||||||    
T  46462425 taatgaatctaaaaagtgaaaagttgcttataattaagatcg 46462384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 320
Target Start/End: Complemental strand, 53225793 - 53225672
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||||||| | |||||||||| ||||||||| |||| | ||||||||| | || | | ||||| | |||||||| |||      
T  53225793 tactccctccggtcctatttataagaaaaaattgactttttagattcattgaataattaatgtatttggtatagaatgtagaccaaatacatcatttatg 53225694  T
Q  299 caatgaatctaaaaagttaaat 320  Q
    ||||||||| ||||||| ||||    
T  53225693 caatgaatcaaaaaagtaaaat 53225672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 20957019 - 20956904
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    ||||||||| | || | ||||||||||||||  |||  ||||||||||| ||||| |||||| | || ||||||||||| | |||||||||||||| |||    
T  20957019 tataagaaacaatttatttttttgattcattcaatagttgatgtatttggtctat-ttctaggctagctacatcaattattgaatgaatctaaaaaatta 20956921  T
Q  318 aatttttcttataaata 334  Q
    |  |||| |||||||||    
T  20956920 acatttttttataaata 20956904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 315
Target Start/End: Original strand, 26066384 - 26066484
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||||| ||||||||   ||||||||| |||| ||||||||  | |||| | | ||||| |||||||||| ||| | |||||||||||||||    
T  26066384 atttataagaaataattgactttcaagattcattgaataattgatgtatccggtctagaatatagaccagatacatcagttatttaatgaatctaaaaag 26066483  T
Q  315 t 315  Q
    |    
T  26066484 t 26066484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 198 - 334
Target Start/End: Complemental strand, 44111895 - 44111759
Alignment:
Q  198 ctacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaa 297  Q
    ||||| |||||||||| |||||||||||| | |||||||||| |||||||||  ||| |||||||| |  | || | | ||||| | |||||||| |||     
T  44111895 ctactccctccggtcttatttataagaaaaagttgactttttagattcattgagtaattgatgtatcttctttagaatatagaccaaatacatcatttat 44111796  T
Q  298 tcaatgaatctaaaaagttaaatttttcttataaata 334  Q
      ||| |||| ||||||| |||| |||||||||||||    
T  44111795 gtaattaatcaaaaaagtcaaatgtttcttataaata 44111759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 54106583 - 54106507
Alignment:
Q  236 tttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaa 312  Q
    |||| ||||||||  ||||||||||||| |||||| |||| ||||||| |||||||| ||| | |||||||||||||    
T  54106583 ttttagattcattcaataaatgatgtatgtgatctttattgtagacaacatacatcatttattgaatgaatctaaaa 54106507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 331
Target Start/End: Complemental strand, 24100827 - 24100776
Alignment:
Q  280 acaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||||||||| ||||| ||||||||||||||||||||| | ||||||||||    
T  24100827 acaagatacattaattattcaatgaatctaaaaagttaattatttcttataa 24100776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 331
Target Start/End: Original strand, 24100884 - 24100935
Alignment:
Q  280 acaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||||||||| ||||| ||||||||||||||||||||| | ||||||||||    
T  24100884 acaagatacattaattattcaatgaatctaaaaagttaattatttcttataa 24100935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 50685471 - 50685530
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatat 274  Q
    ||||||| |||| ||||||||||||| ||| ||| ||||||||||||||||| |||||||    
T  50685471 atttatacgaaacatttgactttttttattaattccataaatgatgtatttggtctatat 50685530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 313
Target Start/End: Original strand, 25700456 - 25700566
Alignment:
Q  203 tcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaat 302  Q
    ||||||||||| ||||||||  ||  ||| ||||||| ||||||||   |||||||||||| ||||||| | | ||||| | |||||||| ||| | |||    
T  25700456 tcctccggtctcatttataaataaatttttactttttagattcattcagtaaatgatgtatgtgatctacaatatagaccacatacatcatttattgaat 25700555  T
Q  303 gaatctaaaaa 313  Q
    |||||||||||    
T  25700556 gaatctaaaaa 25700566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 25700566 - 25700468
Alignment:
Q  235 ttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaat 333  Q
    ||||| ||||||||  ||||||||||||| || |||||||| ||||  | |||||||| ||| | |||||||||||||||| ||| |||  ||||||||    
T  25700566 tttttagattcattcaataaatgatgtatgtggtctatattgtagatcacatacatcatttactgaatgaatctaaaaagtaaaaatttatttataaat 25700468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 331
Target Start/End: Original strand, 29686417 - 29686531
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| |||||||||||| | |||||||  |||||||||||| |  ||||||||    |||| |||||| |||||  |||||||| |||||| ||    
T  29686417 ttataagaaacatttgactttttaggttcattgtgtaaatgatgtatctagtctatatttataacaatatacattaattatacaatgaatttaaaaaatt 29686516  T
Q  317 aaatttttcttataa 331  Q
    || | ||||||||||    
T  29686517 aattgtttcttataa 29686531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 331
Target Start/End: Complemental strand, 54864195 - 54864081
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| | || ||||||||| ||||||| |||| |||||||| |  ||||||||    | ||||||||| ||||| || ||||| |||||||||     
T  54864195 ttataagaaacaattaacttttttggttcattgtataagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtc 54864096  T
Q  317 aaatttttcttataa 331  Q
    || ||||||||||||    
T  54864095 aactttttcttataa 54864081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 334
Target Start/End: Complemental strand, 27841969 - 27841846
Alignment:
Q  209 ggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatct 308  Q
    ||||| || ||||||||| | || | ||||||  ||||||| |||  ||||||||||||||||| |||||| | || ||||| ||||| | |||||||||    
T  27841969 ggtcttatatataagaaacaatttattttttttgttcattgaatagttgatgtatttgatctat-ttctaggctaggtacattaattattgaatgaatct 27841871  T
Q  309 aaaaagttaaatttttcttataaata 334  Q
    ||||| |||| ||||| |||||||||    
T  27841870 aaaaaattaacttttt-ttataaata 27841846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 37991501 - 37991550
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatt 264  Q
    |||||||||||| |||| | ||||||||||||||| ||||||||||||||    
T  37991501 atttataagaaacatttaaattttttgattcattgtataaatgatgtatt 37991550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 313
Target Start/End: Complemental strand, 1140980 - 1140900
Alignment:
Q  233 acttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    ||||||| |||||||||  ||| |||||||| || ||||||||    |||| |||||||||||| ||||||||||||||||    
T  1140980 actttttagattcattgtgtaagtgatgtatctggtctatatttataacaaaatacatcaattattcaatgaatctaaaaa 1140900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 16412233 - 16412305
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatcta 271  Q
    |||||||||||||   |||||||||||| | |||||||||| ||||||||| |||| |||| |||||| ||||    
T  16412233 tacttcctccggttctatttataagaaaaaattgactttttagattcattgaataattgatatatttggtcta 16412305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 349
Target Start/End: Complemental strand, 31853198 - 31853066
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| |||||||||||| | |||||||  ||| |||||||| |  ||||||||    ||||||||||| ||||| || ||||||  ||||| |     
T  31853198 ttataagaaaaatttgactttttaggttcattgtgtaagtgatgtatctagtctatatttataacaagatacattaattattctatgaattaaaaaaatc 31853099  T
Q  317 aaatttttcttataaataagatcgaaggaagta 349  Q
    || | ||||||||||  ||||||||||| ||||    
T  31853098 aattatttcttataataaagatcgaagggagta 31853066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 334
Target Start/End: Complemental strand, 32517860 - 32517784
Alignment:
Q  258 atgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||||| || ||||| ||| ||||||||  |||| |||||| ||||||||||| || ||| |||||||||||    
T  32517860 atgtatttgatttagattcttgactagatacatatattattcaatgtatctaaaaagtcaactttctcttataaata 32517784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 331
Target Start/End: Complemental strand, 2401132 - 2401053
Alignment:
Q  252 taaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||||||||||||  |||||||| | ||| | |||||||| ||| | ||||||| ||||||||||| |||| |||||||    
T  2401132 taaatgatgtatttagtctatattattgaccaaatacatcatttattgaatgaatttaaaaagttaacttttgcttataa 2401053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 331
Target Start/End: Original strand, 8347508 - 8347623
Alignment:
Q  217 ttataagaaatatttgactttttt-gattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    |||||||||| |||||| |||||| | ||||||| ||||||||||||| |  ||||||||    | ||||||||| | ||| || ||||| |||||||||    
T  8347508 ttataagaaacatttgattttttttggttcattgtataaatgatgtatctagtctatatttacaataagatacattatttattctatgaacctaaaaagt 8347607  T
Q  316 taaatttttcttataa 331  Q
     || ||||||||||||    
T  8347608 caactttttcttataa 8347623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 30206526 - 30206581
Alignment:
Q  258 atgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    ||||||||| |||||||| || || |||||||||||||| ||||||||||| ||||    
T  30206526 atgtatttggtctatattataaaccagatacatcaattattcaatgaatctgaaaa 30206581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 331
Target Start/End: Original strand, 31853084 - 31853198
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtat-ttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    |||||||||||| |||| |||||| |||||| | |||| | |||||| ||| | || ||  ||||| |||||||||| |||  ||||||| |||||||||    
T  31853084 ttataagaaataattgatttttttaattcatagaataattaatgtatcttgttataaata-tagactagatacatcacttacacaatgaacctaaaaagt 31853182  T
Q  316 taaatttttcttataa 331  Q
     |||||||||||||||    
T  31853183 caaatttttcttataa 31853198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 41116562 - 41116625
Alignment:
Q  200 acttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtat 263  Q
    |||||||||||||  |||||||||||| |||| ||||||| |||||||||  ||| ||||||||    
T  41116562 acttcctccggtcctatttataagaaaaatttaactttttagattcattgagtaattgatgtat 41116625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 305
Target Start/End: Complemental strand, 42160123 - 42160016
Alignment:
Q  198 ctacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaa 297  Q
    ||||||||||||||||   |||||||||| |||||||||||| || |||||   ||| ||||||||||  ||||||||    ||||||||||| |||||     
T  42160123 ctacttcctccggtctttattataagaaacatttgactttttagaatcattatgtaagtgatgtatttagtctatatttataacaagatacattaattat 42160024  T
Q  298 tcaatgaa 305  Q
    || |||||    
T  42160023 tctatgaa 42160016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 50121436 - 50121571
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| ||| |||||| |||||||||||| |||||||||||| |||| |||| || | |||||||| |  ||||   | ||||| | ||| |||| |||      
T  50121436 tactcccttcggtcttatttataagaaaaatttgactttttagatttattgaatgattgatgtatcttgtctagtatatagaccaaatatatcatttatg 50121535  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||  ||||||| |||| |||||||||||||    
T  50121536 caatgaattaaaaaagtcaaatgtttcttataaata 50121571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 20814554 - 20814640
Alignment:
Q  229 tttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    ||||||||||| | ||||||  |||||||||| || ||||||| | ||||||| | || ||||| ||| | ||||||||||||||||    
T  20814554 tttgactttttaggttcattcaataaatgatgcatgtgatctacaatctagaccacatgcatcatttattgaatgaatctaaaaagt 20814640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 331
Target Start/End: Complemental strand, 35877445 - 35877331
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| | || | ||||||| |||||||  ||| ||||||||||   |||||||    | ||||||||| ||||| || |||||||||||||||     
T  35877445 ttataagaaacaattaatttttttggttcattgtgtaagtgatgtatttagactatatttacaataagatacattaattattctatgaatctaaaaagtc 35877346  T
Q  317 aaatttttcttataa 331  Q
    || ||||||||||||    
T  35877345 aactttttcttataa 35877331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 42169176 - 42169126
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtattt 265  Q
    |||||||||||| |||||||||||| |||| |||| |||| ||||||||||    
T  42169176 atttataagaaaaatttgactttttagatttattgaataattgatgtattt 42169126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 245
Target Start/End: Original strand, 46434098 - 46434144
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattc 245  Q
    ||||| ||||||||| |||||||| |||||||||||||||| |||||    
T  46434098 tactttctccggtcttatttataaaaaatatttgactttttagattc 46434144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 21586965 - 21587030
Alignment:
Q  251 ataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    ||||||||||||| ||  ||||||| ||||| | |||||||| ||| | |||||||||||||||||    
T  21586965 ataaatgatgtatgtgtcctatattatagactacatacatcatttattgaatgaatctaaaaagtt 21587030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 34226402 - 34226459
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctat 272  Q
    |||||||| ||| | || ||||||||||||||||| |||| ||||||||||| |||||    
T  34226402 atttataataaacaatttacttttttgattcattgaataattgatgtatttggtctat 34226459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 333
Target Start/End: Complemental strand, 39533848 - 39533767
Alignment:
Q  252 taaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaat 333  Q
    |||||||||||| ||||||||| |  |||  | |||||||| ||||| ||||||||||||| ||||| |||| |||| ||||    
T  39533848 taaatgatgtatgtgatctataataaagattatatacatcatttaataaatgaatctaaaatgttaatttttgcttacaaat 39533767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 349
Target Start/End: Original strand, 8826779 - 8826839
Alignment:
Q  289 atcaattaatcaatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    |||||||| |||||||||||||||||| || |||||| || ||||| || || ||||||||    
T  8826779 atcaattattcaatgaatctaaaaagtaaattttttcatacaaataggaccggaggaagta 8826839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 19150720 - 19150672
Alignment:
Q  286 tacatcaattaatcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||| ||||| ||||| |||||||||||| || |||||||||||||||    
T  19150720 tacattaattactcaataaatctaaaaagtcaactttttcttataaata 19150672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 19878376 - 19878300
Alignment:
Q  254 aatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttata 330  Q
    |||||||||| |||||| |||| ||| | | |||||||  ||||| ||||||||||||| ||||| |||| ||||||    
T  19878376 aatgatgtatatgatctttattatagtccacatacatcgtttaatgaatgaatctaaaatgttaatttttgcttata 19878300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 311
Target Start/End: Complemental strand, 20114192 - 20114096
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaa 311  Q
    |||||||| ||| | || ||||||| |||| |||| |||| | |||||| || ||||||||||| || | |||||| ||||| |||||| |||||||    
T  20114192 atttataaaaaacaatttactttttagattaattgaataactaatgtatatggtctatattctaaaccaaatacataaattattcaatgtatctaaa 20114096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 31262641 - 31262721
Alignment:
Q  251 ataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||||||||||| |||||||||||  |||| | ||| |||| |||   ||||||||||||| || ||||||| |||||||    
T  31262641 ataaatgatgtatgtgatctatattaaagactacatatatcatttatcgaatgaatctaaaatgtcaaattttgcttataa 31262721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 333
Target Start/End: Original strand, 39993123 - 39993171
Alignment:
Q  285 atacatcaattaatcaatgaatctaaaaagttaaatttttcttataaat 333  Q
    |||||| ||||| ||||||||||||||||||||  |||| |||||||||    
T  39993123 atacattaattattcaatgaatctaaaaagttattttttacttataaat 39993171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 337
Target Start/End: Original strand, 41459439 - 41459547
Alignment:
Q  229 tttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttctta 328  Q
    ||||| ||||| ||||||||  |||||||||||||  ||| |||||| || || | ||| |||| ||| | ||||||||||||||||  || ||| |||     
T  41459439 tttgattttttagattcattcaataaatgatgtatgagatatatattgtaaactacataaatcatttattgaatgaatctaaaaagtagaaatttgcttg 41459538  T
Q  329 taaataaga 337  Q
    |||||||||    
T  41459539 taaataaga 41459547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 46518467 - 46518547
Alignment:
Q  251 ataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    |||||||||||||||| | |||||| | ||| | |||||||| ||| | ||| || |||||||||||| |||| |||||||    
T  46518467 ataaatgatgtatttggtatatattattgactaaatacatcatttattgaataaacctaaaaagttaatttttgcttataa 46518547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 9e-49; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 215 - 349
Target Start/End: Complemental strand, 5031597 - 5031463
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| | ||||||| |||||||    
T  5031597 atttataagaaacatttgacttttttgattcattgcataaatgatgtatttagtctatattctagacaagatacatcaattacttaatgaatttaaaaag 5031498  T
Q  315 ttaaatttttcttataaataagatcgaaggaagta 349  Q
    |||||||||||||||||||| || || ||||||||    
T  5031497 ttaaatttttcttataaataggaccggaggaagta 5031463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 199 - 333
Target Start/End: Original strand, 16448788 - 16448922
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||| |||||| | ||||||||| | ||||||||||||||| |    
T  16448788 tacttcctccggtcctatttataagaaacatttgacttttttgattcattgcataaatgatatatttggtttatattctatataagatacatcaattact 16448887  T
Q  299 caatgaatctaaaaagttaaatttttcttataaat 333  Q
    |||||||||||||||||||||||||||||||||||    
T  16448888 caatgaatctaaaaagttaaatttttcttataaat 16448922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 215 - 349
Target Start/End: Original strand, 35149683 - 35149817
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||  |||| ||||||||||     
T  35149683 atttataagaaacatttgacttttttgattaattgcataaatgatgtatttggtctatattctagacaagatacattaattacacaataaatctaaaaaa 35149782  T
Q  315 ttaaatttttcttataaataagatcgaaggaagta 349  Q
    | || ||||||||||||||| || |||||| ||||    
T  35149783 tcaactttttcttataaataggaccgaagggagta 35149817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 215 - 349
Target Start/End: Original strand, 42122981 - 42123117
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||| |||||||||||||||||    
T  42122981 atttataagaaacgtttgacttttttgattcattgcataaatgatgtatttggtatatattctagacaagatacattaattactcaatgaatctaaaaag 42123080  T
Q  315 ttaa--atttttcttataaataagatcgaaggaagta 349  Q
    | ||   ||||| |||||||||||| || ||||||||    
T  42123081 tcaatttttttttttataaataagaccggaggaagta 42123117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 205 - 334
Target Start/End: Complemental strand, 8793862 - 8793733
Alignment:
Q  205 ctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatga 304  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||| | |||||||||||| |||||||    
T  8793862 ctccggtcctatttataagaaatatttgacttttttgattcattgcataaatgatgtatttagtctatattatagaccaaatacatcaattactcaatga 8793763  T
Q  305 atctaaaaagttaaatttttcttataaata 334  Q
    ||||||||  | || |||| ||||||||||    
T  8793762 atctaaaatatcaacttttacttataaata 8793733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 199 - 349
Target Start/End: Complemental strand, 3236479 - 3236331
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||||||||||||||||||||| |||||||| |||||||||||||||| |||| ||| || || |||||||||||||| |    
T  3236479 tactccctccggtcatatttataagaaatatttgacttttttaattcattgtataaatgatgtatttggtctaaattttaaactagatacatcaattatt 3236380  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    |||||||| |||||||| || ||||||  ||||||||||||| ||| ||||    
T  3236379 caatgaatttaaaaagtcaattttttc--ataaataagatcggagggagta 3236331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 8803377 - 8803242
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||||||||| ||  |||||||| |||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||      
T  8803377 tacttcctccgatcctatttataaaaaatatttaacttttttgattcattacataaatgatgtatttggtctatattctagacaagatacattaattaca 8803278  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
     ||| ||| ||||||||||| |||||||| ||||||    
T  8803277 taataaatataaaaagttaactttttcttgtaaata 8803242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 40483282 - 40483417
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  ||||||||||||||||| |||||||| ||||||||||||||||||||||||| || |||||||||| |||||| |||||||| |    
T  40483282 tactacctccggtcctatttataagaaatatttaacttttttaattcattgcataaatgatgtatttggtccatattctagataagatatatcaattact 40483381  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    |||| |||  ||||||| |||||||||| |||||||    
T  40483382 caataaattgaaaaagtcaaatttttctaataaata 40483417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 215 - 340
Target Start/End: Original strand, 8453610 - 8453734
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||||| |||| |||||| |||||||||||||| ||||||| |||||||| ||||||||||||||||||||| |||||||| |||||| |||||||||     
T  8453610 atttataggaaacatttgaattttttgattcattacataaataatgtattt-atctatattctagacaagatatatcaattactcaatgtatctaaaaaa 8453708  T
Q  315 ttaaatttttcttataaataagatcg 340  Q
    | |||||||||||||||||| |||||    
T  8453709 tcaaatttttcttataaataggatcg 8453734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 225 - 349
Target Start/End: Original strand, 10184576 - 10184700
Alignment:
Q  225 aatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaattttt 324  Q
    |||||||||||||||| |||||||| |||||||||||||||| |||||||||| ||  | |||||||||||| ||||||||||||||||||  | |||||    
T  10184576 aatatttgactttttttattcattgtataaatgatgtatttggtctatattctggatcatatacatcaattattcaatgaatctaaaaagtcgatttttt 10184675  T
Q  325 cttataaataagatcgaaggaagta 349  Q
    |||||||||| ||||| ||||||||    
T  10184676 cttataaatatgatcggaggaagta 10184700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 7693048 - 7693167
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||  |||||||| || || | |||||| ||||| |||||||||||||||||    
T  7693048 atttataagaaacattttacttttttgattcattgcataaatgatgtatttagtctatattttataccaaatacattaattactcaatgaatctaaaaag 7693147  T
Q  315 ttaaatttttcttataaata 334  Q
    | || |||||||||||||||    
T  7693148 tcaattttttcttataaata 7693167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 206 - 334
Target Start/End: Complemental strand, 10839904 - 10839777
Alignment:
Q  206 tccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaa 305  Q
    |||||||  |||||||||||| |||| ||||||| |||||||||||||||||||||||||| ||||||||||| || |  ||||| ||||| ||||||||    
T  10839904 tccggtcctatttataagaaacatttaacttttt-gattcattgcataaatgatgtatttggtctatattctataccaagtacattaattattcaatgaa 10839806  T
Q  306 tctaaaaagttaaatttttcttataaata 334  Q
    |||||||||| || |||||||||||||||    
T  10839805 tctaaaaagtcaattttttcttataaata 10839777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 199 - 349
Target Start/End: Original strand, 15726759 - 15726908
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||||||||| ||  ||||||||||||||||||| |||||| ||| || |||||||||||||||||  | |||||| || ||||||||  ||||||| |    
T  15726759 tacttcctccgatcctatttataagaaatatttga-ttttttaatttatcgcataaatgatgtattttgtatatattttaaacaagataagtcaattact 15726857  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    ||||||||||||||||| || ||||||||||||||| |||||  |||||||    
T  15726858 caatgaatctaaaaagtcaattttttcttataaataggatcggcggaagta 15726908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 197 - 334
Target Start/End: Complemental strand, 43332712 - 43332574
Alignment:
Q  197 actacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttga-tctatattctagacaagatacatcaatt 295  Q
    |||||| ||||| |||  |||||||| |||||||||| ||||||||||||||||||||||||||| |||   |||  ||||||||||||||| || ||||    
T  43332712 actactccctccagtcctatttataaaaaatatttgatttttttgattcattgcataaatgatgtttttttgtcttcattctagacaagatatattaatt 43332613  T
Q  296 aatcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    | |||||||||||||||||| ||| ||||||||||||||    
T  43332612 actcaatgaatctaaaaagtcaaaattttcttataaata 43332574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 215 - 330
Target Start/End: Original strand, 16008538 - 16008653
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| ||||||||||||| ||  ||||||||||| ||||||||| || ||||||||||||| ||||||||| || ||||| ||||||| |||    
T  16008538 atttataagaaacatttgacttttttaatctattgcataaataatgtatttggtcaatattctagacaaaatacatcaagtactcaataaatctaagaag 16008637  T
Q  315 ttaaatttttcttata 330  Q
    | ||||||||||||||    
T  16008638 tcaaatttttcttata 16008653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 215 - 337
Target Start/End: Original strand, 32597513 - 32597635
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| ||||||||||||||||||||||| |||| |||||||||  |||||||| || || |  ||||| ||||| ||||||||| | |||||    
T  32597513 atttataagaaacatttgacttttttgattcattgcgtaaacgatgtattttgtctatattttataccacgtacattaattactcaatgaattttaaaag 32597612  T
Q  315 ttaaatttttcttataaataaga 337  Q
    |||| ||||||||||||||||||    
T  32597613 ttaactttttcttataaataaga 32597635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 24618973 - 24619091
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattcta-gacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||  ||||| ||||| ||||| ||||||||||| ||||    
T  24618973 atttataagaaacctttgacttttttgattcattgcataaatgatgtatttggtctatattctataacaag-tacattaattactcaatgaatct-aaaa 24619070  T
Q  314 gttaaatttttcttataaata 334  Q
    || || || ||||||||||||    
T  24619071 gtcaacttgttcttataaata 24619091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 233 - 337
Target Start/End: Complemental strand, 34711196 - 34711092
Alignment:
Q  233 acttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaa 332  Q
    |||||||||||| ||||||| ||||||||||||  | |||||| ||||||| |||||||||||| |||||||||||||||||| || ||||| |||||||    
T  34711196 acttttttgatttattgcattaatgatgtatttagtttatattttagacaaaatacatcaattactcaatgaatctaaaaagtcaatttttttttataaa 34711097  T
Q  333 taaga 337  Q
    |||||    
T  34711096 taaga 34711092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 6899568 - 6899434
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||||||||| ||||||   || ||||||||||| |    
T  6899568 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttgatctat-ttctaggttaggtacatcaattatt 6899470  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
     ||||||||| |||||||||||||||||||||||||    
T  6899469 gaatgaatctcaaaagttaaatttttcttataaata 6899434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 229 - 334
Target Start/End: Complemental strand, 1223242 - 1223137
Alignment:
Q  229 tttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttctta 328  Q
    ||||||| |||| ||||||||||||||| ||||||||| |||||||| | |||||||||||| |||||  ||||||||||||||||| |  |||||||||    
T  1223242 tttgactattttaattcattgcataaattatgtatttggtctatatttttgacaagatacattaattacacaatgaatctaaaaagtcacttttttctta 1223143  T
Q  329 taaata 334  Q
    ||||||    
T  1223142 taaata 1223137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 199 - 340
Target Start/End: Complemental strand, 12958924 - 12958784
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||  | || ||||||||||| |    
T  12958924 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaagctaggtacatcaattatt 12958826  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcg 340  Q
     ||||||||||||||||||| ||||||||||||||| |||||    
T  12958825 gaatgaatctaaaaagttaactttttcttataaataggatcg 12958784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 44796490 - 44796356
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | |  ||||||||||| |    
T  44796490 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctatgtacatcaattatt 44796392  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
     ||||||||||||||||||| |||||||||||||||    
T  44796391 gaatgaatctaaaaagttaactttttcttataaata 44796356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 334
Target Start/End: Complemental strand, 15720319 - 15720213
Alignment:
Q  228 atttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttctt 327  Q
    |||| |||||||||||||||| ||||||| |||||||||||||||||| || |  | |||||||||||| || || | ||||||||||||| ||||||||    
T  15720319 atttaacttttttgattcattccataaataatgtatttgatctatattttataacaaatacatcaattactctataagtctaaaaagttaattttttctt 15720220  T
Q  328 ataaata 334  Q
    |||||||    
T  15720219 ataaata 15720213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 199 - 352
Target Start/End: Original strand, 36366024 - 36366176
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||  |||  ||||||||||| ||||| |||||| | || ||||||||||| |    
T  36366024 tactccctccggtcctatatataagaaacaatttacttttttgattcattcaatagttgatgtatttggtctat-ttctaggctaggtacatcaattatt 36366122  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagtagta 352  Q
     |||||||||||||| |||| ||||||||||||||| || || ||| |||||||    
T  36366123 gaatgaatctaaaaaattaactttttcttataaataggaccggaggtagtagta 36366176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 36191773 - 36191856
Alignment:
Q  226 atatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaa 311  Q
    |||||||||||||||  ||||||||||||||||||||||||   |||||| || ||||||||||||||||| ||||||||||||||    
T  36191773 atatttgacttttttctttcattgcataaatgatgtatttg--gtatattttatacaagatacatcaattattcaatgaatctaaa 36191856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 199 - 296
Target Start/End: Complemental strand, 40651370 - 40651275
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaatta 296  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||  | |||||| ||||||||  | |||||| |||||||||||||| |||||    
T  40651370 tacttcttccggtcttatttataagaaatatttgacttttttgattca--gtataaataatgtatttagtttatattatagacaagatacattaatta 40651275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 35011341 - 35011226
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||| ||||| | |||||||||||||| |||    
T  35011341 tataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacattaattattgaatgaatctaaaaaatta 35011243  T
Q  318 aatttttcttataaata 334  Q
    | |||||||||||||||    
T  35011242 actttttcttataaata 35011226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 334
Target Start/End: Original strand, 883653 - 883752
Alignment:
Q  235 ttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    |||||| |||| ||||||||||||| |||||||| |||||| ||||||| ||| || |||||  |||| |||||||||||| || |||||||||||||||    
T  883653 ttttttaattcgttgcataaatgatatatttgatttatattttagacaaaatatattaattacacaatcaatctaaaaagtcaactttttcttataaata 883752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 22429683 - 22429549
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||| ||||| |    
T  22429683 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacattaattatt 22429585  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
     ||| |||||||||| |||| |||||||||||||||    
T  22429584 gaataaatctaaaaaattaactttttcttataaata 22429549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 331
Target Start/End: Original strand, 43932066 - 43932180
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| | |||||||||| | ||||||| | ||||||||||| | |||||||||    ||||||||||| ||||| ||||||||||||||||||     
T  43932066 ttataagaaacaattgactttttaggttcattgtacaaatgatgtatctaatctatatttataacaagatacattaattattcaatgaatctaaaaagtc 43932165  T
Q  317 aaatttttcttataa 331  Q
    || | ||||||||||    
T  43932166 aattgtttcttataa 43932180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 209 - 334
Target Start/End: Original strand, 24915179 - 24915303
Alignment:
Q  209 ggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatct 308  Q
    ||||| ||||||||| || | || | ||||||||||||||  |||| ||||||||||  ||||| |||||  | |||||||||||||| | |||||||||    
T  24915179 ggtcttatttataagtaacaatttatttttttgattcattaaataattgatgtattttgtctat-ttctaagctagatacatcaattatttaatgaatct 24915277  T
Q  309 aaaaagttaaatttttcttataaata 334  Q
    |||||||||| |||||| ||||||||    
T  24915278 aaaaagttaattttttcatataaata 24915303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 24178101 - 24177986
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    ||||||||| | || | ||||||||||||||| |||  ||||||||||| ||||| |||||  | || |||||||| || | ||||||||||||||||||    
T  24178101 tataagaaacagtttatttttttgattcattgaatagttgatgtatttggtctat-ttctaagctaggtacatcaaatattgaatgaatctaaaaagtta 24178003  T
Q  318 aatttttcttataaata 334  Q
    | |||||||||||||||    
T  24178002 actttttcttataaata 24177986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 337
Target Start/End: Complemental strand, 42786513 - 42786375
Alignment:
Q  197 actacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaatta 296  Q
    ||||||||||||||||  || ||||||||| | || ||||||| |||| |||| |||  | ||||||||| ||||| |||||  | |  |||||||||||    
T  42786513 actacttcctccggtcctatatataagaaacaatttacttttt-gatttattgaatagttaatgtatttggtctat-ttctaagctaagtacatcaatta 42786416  T
Q  297 atcaatgaatctaaaaagttaaatttttcttataaataaga 337  Q
     | ||||||||||||||||||| ||||||||||||||||||    
T  42786415 ttgaatgaatctaaaaagttaactttttcttataaataaga 42786375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 6354663 - 6354781
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||||| | || |||||||||| |||| |||| | |||||| |||| |||||||||||    |||||| ||||| ||||||||||||||||     
T  6354663 atttataagaaataat-gaattttttgatttattgaataattaatgtatatgatatatattctagatcgaatacataaattattcaatgaatctaaaaaa 6354761  T
Q  315 ttaaatttttcttataaata 334  Q
    |||| | |||||||||||||    
T  6354762 ttaattatttcttataaata 6354781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 10839762 - 10839896
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||||||||| |||  |||||||||||| | |||||||||| ||||||||| |||| | ||||| ||| | || | | ||||| | |||||||| |||      
T  10839762 tacttcctccagtcctatttataagaaaaaattgactttttagattcattgaataattaatgtacttggtatagaatatagaccaaatacatcatttatg 10839861  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||| |||||||||||| |||||||||||||    
T  10839862 caatgaatc-aaaaagttaaatgtttcttataaata 10839896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 215 - 290
Target Start/End: Original strand, 24821906 - 24821981
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacat 290  Q
    |||||||||||| |||| |||||||| ||| ||| ||||||| |||||||| || |||||||||||||||||||||    
T  24821906 atttataagaaacatttaacttttttaatttattacataaataatgtatttaatatatattctagacaagatacat 24821981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 343
Target Start/End: Original strand, 5031463 - 5031607
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||||||||||||  |||||||||||| |||| |||||||  |||||||   ||| |||||||| |  |||| | | ||||| | |||||||| |||      
T  5031463 tacttcctccggtcctatttataagaaaaatttaactttttaaattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatg 5031562  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaag 343  Q
    ||||||||| ||||||| |||| ||||||||||||| || |||||    
T  5031563 caatgaatcaaaaaagtcaaatgtttcttataaataggagcgaag 5031607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 334
Target Start/End: Complemental strand, 7693175 - 7693047
Alignment:
Q  206 tccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaa 305  Q
    |||||||  |||||||||||| | |||||||||| |||||||||  ||| | ||||||||| | || | | ||||| | |||||||| |||  |||||||    
T  7693175 tccggtcctatttataagaaaaaattgactttttagattcattgagtaattaatgtatttggtataaaatatagactaaatacatcatttatgcaatgaa 7693076  T
Q  306 tctaaaaagttaaatttttcttataaata 334  Q
    || ||||||| |||| |||||||||||||    
T  7693075 tcaaaaaagtaaaatgtttcttataaata 7693047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 30255829 - 30255785
Alignment:
Q  252 taaatgatgtatttgatctatattctagacaagatacatcaatta 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  30255829 taaatgatgtatttgatatatattctagacaagatacatcaatta 30255785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 8793734 - 8793853
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||||||| || | ||||  |||| |||||||||  ||| ||||||||||| |||||| | ||||| | |||||||| |||  ||||||||| ||||||    
T  8793734 atttataagtaaaagttgatattttagattcattgagtaattgatgtatttggtctataatatagactaaatacatcatttatgcaatgaatcaaaaaag 8793833  T
Q  315 ttaaatttttcttataaata 334  Q
    | |||| |||||||||||||    
T  8793834 tcaaatatttcttataaata 8793853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 5888439 - 5888349
Alignment:
Q  241 gattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||||||  || |||||||||| || ||| |||| ||||||| |||||||| ||||| ||||||||||||| ||||| |||| |||||||    
T  5888439 gattcattcaattaatgatgtatatggtctttattatagacaacatacatcatttaatgaatgaatctaaaacgttaatttttgcttataa 5888349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 27789385 - 27789314
Alignment:
Q  242 attcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    |||||||| |||| ||||||||||| || ||||| || || |||||||||||||| |||||||||| |||||    
T  27789385 attcattgaataactgatgtatttggtcaatattatataccagatacatcaattattcaatgaatcaaaaaa 27789314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 340
Target Start/End: Complemental strand, 30924801 - 30924710
Alignment:
Q  250 cataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttt-tcttataaataagatcg 340  Q
    ||||||| || |||||| |||||||||||||  | |||||||||||||| ||| |||||||||||| || |||| | |||||||||| ||||    
T  30924801 cataaataatatatttggtctatattctagatcaaatacatcaattaattaataaatctaaaaagtcaatttttattttataaataatatcg 30924710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 39756400 - 39756471
Alignment:
Q  240 tgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaa 311  Q
    ||||| |||| ||||||||| |||| |||| ||||| |||| || |||||||||||| ||||||||||||||    
T  39756400 tgatttattgaataaatgatatattcgatcgatattttagataaaatacatcaattattcaatgaatctaaa 39756471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 331
Target Start/End: Original strand, 13831892 - 13832006
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| | || ||||||||| ||||||| |||| |||||||| |  ||||||||    | ||||||||| ||||| || ||||| |||||||||     
T  13831892 ttataagaaacaattaacttttttggttcattgtataagtgatgtatatagtctatatttacaataagatacattaattattctatgaacctaaaaagtc 13831991  T
Q  317 aaatttttcttataa 331  Q
    || ||||||||||||    
T  13831992 aactttttcttataa 13832006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 32575323 - 32575185
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatac----atcaat 294  Q
    |||| |||||||||  || ||||| ||| | || |||||||| |||||||| |||| ||||||||||| ||||| || ||| | || |||    ||||||    
T  32575323 tactgcctccggtcctatatataaaaaacaatttactttttttattcattgaataattgatgtatttggtctat-ttttaggctaggtacatcaatcaat 32575225  T
Q  295 taatcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    || | ||||||||||||||||||| |||||||| ||||||    
T  32575224 tattgaatgaatctaaaaagttaactttttcttgtaaata 32575185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 331
Target Start/End: Complemental strand, 35584014 - 35583900
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| | || ||||||||| ||||||| |||| |||||||| | |||||||||    | ||||||||| ||||| || ||||| |||||| ||     
T  35584014 ttataagaaacaattaacttttttggttcattgtataagtgatgtatctaatctatatttacaataagatacattaattattctatgaacctaaaaggtc 35583915  T
Q  317 aaatttttcttataa 331  Q
    | |||||||||||||    
T  35583914 atatttttcttataa 35583900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 320
Target Start/End: Complemental strand, 10184700 - 10184579
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||||||||| ||  |||||||||||| | | |||||||| ||||||||| |||| |||||||| ||||| | | | ||||| | |||||||| |||      
T  10184700 tacttcctccgatcatatttataagaaaaaatcgactttttagattcattgaataattgatgtatatgatccagaatatagaccaaatacatcatttata 10184601  T
Q  299 caatgaatctaaaaagttaaat 320  Q
    ||||||||  ||||||| ||||    
T  10184600 caatgaataaaaaaagtcaaat 10184579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 330
Target Start/End: Complemental strand, 45372836 - 45372723
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    ||||||| || | ||||||||||||||||| ||  ||| |||||||| |  |||||||| |  | ||||||||| ||||| || ||||| |||||||||     
T  45372836 ttataagtaacaattgacttttttgattcaatgtgtaagtgatgtatctagtctatattttcaataagatacattaattattctatgaacctaaaaagtc 45372737  T
Q  317 aaatttttcttata 330  Q
    || |||||||||||    
T  45372736 aactttttcttata 45372723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 331
Target Start/End: Complemental strand, 29690585 - 29690453
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||||||||||||    |||||||||| | || ||||||||| ||||||| |||| |||||||| |  ||||||||    | ||||||||| ||||| |    
T  29690585 tacttcctccggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatctagtctatatttataataagatacattaattatt 29690486  T
Q  299 caatgaatctaaaaagttaaatttttcttataa 331  Q
    | ||||| ||||||||| |  ||||||||||||    
T  29690485 ctatgaacctaaaaagtcagttttttcttataa 29690453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 13964457 - 13964528
Alignment:
Q  242 attcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    |||||||  ||||||||||||| || |||||||| ||||| |  ||||||| ||| ||||||||||||||||    
T  13964457 attcattcaataaatgatgtatgtggtctatattatagaccatgtacatcatttactcaatgaatctaaaaa 13964528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 331
Target Start/End: Complemental strand, 17871855 - 17871776
Alignment:
Q  252 taaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||||||||||||  |||||||| | ||| | |||||||| ||||| |||||| |||||||||| | |||| |||||||    
T  17871855 taaatgatgtatttagtctatattattgaccaaatacatcatttaatgaatgaacctaaaaagttgatttttgcttataa 17871776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 331
Target Start/End: Original strand, 26998717 - 26998796
Alignment:
Q  252 taaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||||||||||||| |||| ||| | ||| | |||||||| ||||| ||| ||| ||||||||||| |||| |||||||    
T  26998717 taaatgatgtatttggtctacattattgaccaaatacatcatttaataaataaatttaaaaagttaatttttacttataa 26998796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 280 - 331
Target Start/End: Original strand, 35794606 - 35794657
Alignment:
Q  280 acaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||||||||| ||||| |||||||||||||||||| |||  ||||||||||    
T  35794606 acaagatacattaattactcaatgaatctaaaaagtaaaaagtttcttataa 35794657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 334
Target Start/End: Complemental strand, 4156468 - 4156394
Alignment:
Q  261 tatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaa-atttttcttataaata 334  Q
    |||||| ||||||||  | ||||||||||||||||| |||||| |||||| |||| ||  |||||||||||||||    
T  4156468 tatttggtctatatttcaaacaagatacatcaattactcaatgtatctaacaagtcaatttttttcttataaata 4156394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 334
Target Start/End: Original strand, 13831398 - 13831495
Alignment:
Q  237 ttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaa-atttttcttataaata 334  Q
    |||| |||||||  |||| ||||||||| | ||||| || ||||| | |||||||||||| | |||||||||||||||| ||  |||||||||||||||    
T  13831398 tttttattcattaaataattgatgtattcggtctatttt-tagactaaatacatcaattatttaatgaatctaaaaagtcaatttttttcttataaata 13831495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 308
Target Start/End: Complemental strand, 28872234 - 28872156
Alignment:
Q  230 ttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatct 308  Q
    |||| |||||| |||||||| |||| | |||||| || |||||||||||||   |||||||||| || |||||||||||    
T  28872234 ttgattttttttattcattgaataattaatgtatctggtctatattctagagcggatacatcaactactcaatgaatct 28872156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 331
Target Start/End: Complemental strand, 34604912 - 34604798
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| | |||| ||||||| ||||||| |||| |||||||| |  ||||||||    | ||||||||| | ||| || ||||| |||||||||     
T  34604912 ttataagaaacaattgatttttttggttcattgtataagtgatgtatctagtctatatttacaataagatacattatttattctatgaacctaaaaagtc 34604813  T
Q  317 aaatttttcttataa 331  Q
    || ||||||||||||    
T  34604812 aactttttcttataa 34604798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 340
Target Start/End: Complemental strand, 43295137 - 43295071
Alignment:
Q  274 ttctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataagatcg 340  Q
    |||| ||| ||||||||  |||| |||||| |||||||||||||| ||| ||||||||||| |||||    
T  43295137 ttcttgactagatacatacattattcaatgtatctaaaaagttaactttctcttataaataggatcg 43295071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 8803328 - 8803377
Alignment:
Q  300 aatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    |||||||| |||||||||||| ||| ||||||||| ||||| ||||||||    
T  8803328 aatgaatcaaaaaagttaaatattttttataaataggatcggaggaagta 8803377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 331
Target Start/End: Original strand, 24418907 - 24419007
Alignment:
Q  230 ttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttat 329  Q
    ||||||||||   ||||||  ||||||||||||| || |||||||  ||||| | |||||||| ||| | |||||||||||||||| || |||| |||||    
T  24418907 ttgactttttaagttcattcaataaatgatgtatgtggtctatata-tagacgacatacatcatttattgaatgaatctaaaaagtgaatttttgcttat 24419005  T
Q  330 aa 331  Q
    ||    
T  24419006 aa 24419007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 313
Target Start/End: Complemental strand, 24478537 - 24478460
Alignment:
Q  236 tttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    ||||||||| ||||||||||  || ||||||||||||||| || |  | |||||||||||| ||||||  ||||||||    
T  24478537 tttttgatttattgcataaaaaatatatttgatctatattataaattaaatacatcaattactcaatggctctaaaaa 24478460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 312
Target Start/End: Complemental strand, 29358724 - 29358647
Alignment:
Q  235 ttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaa 312  Q
    ||||| ||| ||||| |||||||||||||||  | |||||| ||| | |||||||| ||||| |||||||| ||||||    
T  29358724 tttttagatacattgtataaatgatgtatttagtttatattatagtctagatacattaattattcaatgaacctaaaa 29358647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 311
Target Start/End: Original strand, 32272678 - 32272731
Alignment:
Q  258 atgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaa 311  Q
    ||||||||| || ||||| ||||| |||||||||| ||| ||||||||||||||    
T  32272678 atgtatttggtcaatattatagacgagatacatcatttattcaatgaatctaaa 32272731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 6189742 - 6189662
Alignment:
Q  236 tttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||| ||||||||  |||||||||||||||  |||||||| | ||| | |||||||| ||| || ||||| ||||||||||    
T  6189742 ttttagattcattcaataaatgatgtatttagtctatattattgaccaaatacatcatttattcgatgaacctaaaaagtt 6189662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 24599686 - 24599734
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtattt 265  Q
    |||||||||||| ||||||||||  |||||||| |||||| ||||||||    
T  24599686 ttataagaaataattgactttttaaattcattgaataaataatgtattt 24599734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 9e-49; HSPs: 102)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 215 - 333
Target Start/End: Original strand, 32457228 - 32457346
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| | |||||||||||||||    
T  32457228 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttagtctatattctagacaagatacatcaattacttaatgaatctaaaaag 32457327  T
Q  315 ttaaatttttcttataaat 333  Q
    | |||||||||||||||||    
T  32457328 tcaaatttttcttataaat 32457346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 7943438 - 7943574
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| |||||||||||||||||||| |    
T  7943438 tacttcctccggtcttatttataagagatatttgactttttttattcattgcataaatgatatatttggtctatattgtagacaagatacatcaattatt 7943537  T
Q  299 caatgaatctaaaaagttaa-atttttcttataaata 334  Q
    ||||||||||||||||| ||  |||||||||||||||    
T  7943538 caatgaatctaaaaagtcaatttttttcttataaata 7943574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 11030191 - 11030326
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||||||||| ||  || ||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||| |  |||||||||||||| |    
T  11030191 tacttcctccgatcctatatataagaaacatttgacttttttgattcattacataaatgatgtatttggtctatattctatatcagatacatcaattact 11030290  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    |||||||||||||||||||| |||||||||||||||    
T  11030291 caatgaatctaaaaagttaattttttcttataaata 11030326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 38982998 - 38983133
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||      
T  38982998 tactccctccggtcctatttataaaaaatatttgacttttttgattcattgcataaatgatgtattttgtctatattctagacaagatacatcaattaca 38983097  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||||||||| | || ||||| |||||||||    
T  38983098 caatgaatctaaaaaatcaacttttttttataaata 38983133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 215 - 357
Target Start/End: Original strand, 30758735 - 30758876
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||| | |||||||||||||||||||| ||||| |||||||||||    
T  30758735 atttataagaaatatttgactttttttattcattgcataaatggtgtatttggtctatactttagacaagatacatcaattactcaat-aatctaaaaag 30758833  T
Q  315 ttaaatttttcttataaataagatcgaaggaagtagtagataa 357  Q
    | |||||||||||||||||| || | |||| ||||| ||||||    
T  30758834 tcaaatttttcttataaataggaccaaagggagtagaagataa 30758876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 215 - 343
Target Start/End: Complemental strand, 33824483 - 33824355
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| ||||| || |||||| ||||||||||| |||||||| ||||||||| |||||||    
T  33824483 atttataagaaatatttgacttttctgattcattgtataaatgatatatttaatatatattttagacaagatatatcaattactcaatgaatttaaaaag 33824384  T
Q  315 ttaaatttttcttataaataagatcgaag 343  Q
    | |||||||||||||||||||||| ||||    
T  33824383 tcaaatttttcttataaataagatggaag 33824355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 217 - 349
Target Start/End: Original strand, 41153128 - 41153260
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| || || | |||||||||||| ||||||||||||||||||     
T  41153128 ttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattataaaccaaatacatcaattactcaatgaatctaaaaagtc 41153227  T
Q  317 aaatttttcttataaataagatcgaaggaagta 349  Q
    || ||||||||||||||| ||||| ||| ||||    
T  41153228 aactttttcttataaataggatcggagggagta 41153260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 35728479 - 35728599
Alignment:
Q  215 atttataagaaatatttga-cttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||| ||||||||| ||||||    
T  35728479 atttataagaaatatttgatcttttttgattcattgcataaatgatatatttggtctatattctaaacaagatacatcaattattcaatgaatttaaaaa 35728578  T
Q  314 gttaaatttttcttataaata 334  Q
    |  |||||||| |||||||||    
T  35728579 gccaaattttttttataaata 35728599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 215 - 334
Target Start/End: Complemental strand, 10205059 - 10204941
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||  |||||||| |||||||||||||||||||  |||||||||||||||||    
T  10205059 atttataagaaatatttgactcttttgattcattgtataaatgatgtatttagtctatattttagacaagatacatcaattgctcaatgaatctaaaaag 10204960  T
Q  315 ttaaatttttcttataaata 334  Q
     |||| ||||||||||||||    
T  10204959 -taaaattttcttataaata 10204941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 215 - 342
Target Start/End: Complemental strand, 29989025 - 29988898
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||  |||||||| ||||||     
T  29989025 atttagaagaaacatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaaaatatattaattacacaatgaatataaaaaa 29988926  T
Q  315 ttaaatttttcttataaataagatcgaa 342  Q
    | || ||||| |||||||||||||||||    
T  29988925 tcaatttttttttataaataagatcgaa 29988898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 215 - 337
Target Start/End: Complemental strand, 12962838 - 12962716
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| || || |  ||||| ||||| |||||||||||||||||    
T  12962838 atttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattttataccaagtacattaattactcaatgaatctaaaaag 12962739  T
Q  315 ttaaatttttcttataaataaga 337  Q
    | || ||||||||||||||||||    
T  12962738 tcaactttttcttataaataaga 12962716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 20555406 - 20555272
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  ||||||| |||| |||| |||||||| ||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| |    
T  20555406 tactccctccggtcctatttataggaaacatttaactttttt-attcattacataaataatgtatttggtctatattctagacaagatacatcaattatt 20555308  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||| ||||||||| |||| |||||||||||||||    
T  20555307 caatgtatctaaaaaattaattttttcttataaata 20555272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 30761527 - 30761392
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||||||| |||||||||||||||||||||||| |||  ||||||||  |||||||||||||||||||| || ||||| |    
T  30761527 tactccctccggtcctatttataagaaacatttgacttttttgattcattgcacaaaatatgtatttagtctatattctagacaagataaattaattact 30761428  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    |||||||| |||||||| |||| |||||||||||||    
T  30761427 caatgaatgtaaaaagtcaaatgtttcttataaata 30761392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 215 - 330
Target Start/End: Complemental strand, 39445128 - 39445013
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||||  ||||||||||| ||| |||||||||||| ||||||| ||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  39445128 atttataagaaattattgacttttttaatttattgcataaatggtgtatttaatctatattctagacaaaatacatcaattactcaatgaatcttaaaag 39445029  T
Q  315 ttaaatttttcttata 330  Q
    | ||||||||||||||    
T  39445028 tcaaatttttcttata 39445013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 28248948 - 28249067
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||  ||||||||||| || | |||||| ||||| | |||||||||||||||    
T  28248948 atttataagaaatatttgacttttttgattaattgcataaataatgtatttagtctatattctataccaaatacattaattatttaatgaatctaaaaag 28249047  T
Q  315 ttaaatttttcttataaata 334  Q
    | || |||||||||||||||    
T  28249048 tcaactttttcttataaata 28249067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 199 - 337
Target Start/End: Original strand, 9152378 - 9152516
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  ||||| |||||| ||||||||||||||| |||||  |||| ||||||||||| |||||||| ||||| |||||||||||||| |    
T  9152378 tactccctccggtcctatttacaagaaacatttgacttttttgagtcattaaataattgatgtatttggtctatattttagactagatacatcaattact 9152477  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataaga 337  Q
    ||||||||||||||||| || | |||||| |||||||||    
T  9152478 caatgaatctaaaaagtcaattgtttcttgtaaataaga 9152516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 215 - 349
Target Start/End: Complemental strand, 12873856 - 12873722
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||  ||||||||||| || | |||||| ||||| | |||||||||||||||    
T  12873856 atttataaaaaatatttgactttattgattcattgcataaatgatgtatttagtctatattctataccaaatacattaattacttaatgaatctaaaaag 12873757  T
Q  315 ttaaatttttcttataaataagatcgaaggaagta 349  Q
    | || ||||||||||||| | ||||| ||| ||||    
T  12873756 tcaactttttcttataaaaaggatcggagggagta 12873722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 215 - 335
Target Start/End: Original strand, 29169850 - 29169970
Alignment:
Q  215 atttataagaaatatttgacttttttga-ttcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    |||||||||||||||||||||||||| | |||||||  ||||||||||||||||||||||||||| |||| ||| |||||||| ||||| ||| ||||||    
T  29169850 atttataagaaatatttgactttttttaattcattgtctaaatgatgtatttgatctatattctaaacaa-atatatcaattactcaataaatttaaaaa 29169948  T
Q  314 gttaaatttttcttataaataa 335  Q
    || |||||||||||||||||||    
T  29169949 gtcaaatttttcttataaataa 29169970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 4410792 - 4410912
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| |||| || ||||||||| |||||||||||||||||||||||||||||| || ||||||||||| |||||  ||||||||||||||||    
T  4410792 atttataagaaacatttaacctttttgatttattgcataaatgatgtatttgatctatattttaaacaagatacattaattacacaatgaatctaaaaag 4410891  T
Q  315 ttaa-atttttcttataaata 334  Q
    | ||  |||||||||||||||    
T  4410892 tcaacttttttcttataaata 4410912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 202 - 334
Target Start/End: Complemental strand, 5109509 - 5109377
Alignment:
Q  202 ttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaa 301  Q
    ||||| || ||| ||||||||||||||||||||||||||||||||  | |||||| ||||||||   |||||||||| || | |||||| ||||| ||||    
T  5109509 ttccttcgatcttatttataagaaatatttgacttttttgattcaaagtataaattatgtatttagcctatattctataccaaatacattaattactcaa 5109410  T
Q  302 tgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||||||||||| |||||||||||||||    
T  5109409 tgaatctaaaaagttaactttttcttataaata 5109377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 38554473 - 38554592
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| |||||||| |||||||||||| ||||||| ||||||||| ||||||||||| || |  ||||| ||||| ||||||||| |||||||    
T  38554473 atttataagaaacatttgactattttgattcattacataaataatgtatttggtctatattctataccaagtacattaattactcaatgaatttaaaaag 38554572  T
Q  315 ttaaatttttcttataaata 334  Q
    |||| |||||||||||||||    
T  38554573 ttaactttttcttataaata 38554592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 43713973 - 43714107
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||| ||| |||||||||||| | |||| ||||||||||||||| |||||| ||||||||| |||||||| |||||||||||||||||||| |    
T  43713973 tactccctccgctcttatttataagaaacaattgatttttttgattcattgaataaattatgtatttggtctatatt-tagacaagatacatcaattact 43714071  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    || | |||||||||||| |||  |||||||||||||    
T  43714072 cagtaaatctaaaaagtcaaaaatttcttataaata 43714107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 199 - 324
Target Start/End: Complemental strand, 28014422 - 28014297
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||||||||| ||  |||||||||||| ||||||| ||||| ||||||||||||||||||||||||| |||||| | |||||||||||||  |||||      
T  28014422 tacttcctccgatcctatttataagaaacatttgaccttttttattcattgcataaatgatgtatttggtctatactatagacaagatacaataattata 28014323  T
Q  299 caatgaatctaaaaagttaaattttt 324  Q
    ||||||||||||||||| || |||||    
T  28014322 caatgaatctaaaaagtcaatttttt 28014297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 34447503 - 34447637
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||||| |||||||  |||||||||||| |||||||||||||  |||||||||||||| ||||||||| | |||||| ||||||||||||||  ||||      
T  34447503 tacttcatccggtcctatttataagaaa-atttgacttttttagttcattgcataaataatgtatttggtttatattttagacaagatacattgattaca 34447601  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||||||||| | || |||||||||||||||    
T  34447602 caatgaatctaaaaaatcaactttttcttataaata 34447637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 215 - 349
Target Start/End: Original strand, 42698079 - 42698213
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||||||||  ||||||| |||||| | |||||| || | |||| ||| |||||||  |||||||||||||||| |||||||||||||||||    
T  42698079 atttataagaaatatttagctttttttattcatggtataaataatatgtttggtctttattctaagcaagatacatcaattactcaatgaatctaaaaag 42698178  T
Q  315 ttaaatttttcttataaataagatcgaaggaagta 349  Q
    | |||||||| ||||||||| ||||| ||| ||||    
T  42698179 tcaaattttttttataaatatgatcggagggagta 42698213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 224 - 340
Target Start/End: Original strand, 5281202 - 5281317
Alignment:
Q  224 aaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttt 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || || | |||||| |||||   ||| ||| |||||||| || ||||    
T  5281202 aaatatttgacttttttgattcattgcataaatgatgtatttgatctatattttataccaaatacattaattacaaaat-aatataaaaagtcaactttt 5281300  T
Q  324 tcttataaataagatcg 340  Q
    ||||||||||| |||||    
T  5281301 tcttataaatatgatcg 5281317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 28494837 - 28494757
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaatt 295  Q
    |||||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||    
T  28494837 atttataagaaacatttgatttttttgattcattgcataaatgatatatttggtctatattctagacaatatacatcaatt 28494757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 199 - 351
Target Start/End: Complemental strand, 45571178 - 45571027
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||||||||| |    
T  45571178 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattatt 45571080  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagtagt 351  Q
     ||||||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  45571079 gaatgaatctaaaaagttaattttttcttataaataggaccggaggtagtagt 45571027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 199 - 351
Target Start/End: Complemental strand, 45574845 - 45574694
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||||||||| |    
T  45574845 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattatt 45574747  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagtagt 351  Q
     ||||||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  45574746 gaatgaatctaaaaagttaattttttcttataaataggaccggaggtagtagt 45574694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 199 - 351
Target Start/End: Complemental strand, 45578512 - 45578361
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||||||||| |    
T  45578512 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattatt 45578414  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagtagt 351  Q
     ||||||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  45578413 gaatgaatctaaaaagttaattttttcttataaataggaccggaggtagtagt 45578361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 199 - 351
Target Start/End: Complemental strand, 45582179 - 45582028
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||||||||| |    
T  45582179 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattatt 45582081  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagtagt 351  Q
     ||||||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  45582080 gaatgaatctaaaaagttaattttttcttataaataggaccggaggtagtagt 45582028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 199 - 351
Target Start/End: Complemental strand, 45585846 - 45585695
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||||||||| |    
T  45585846 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattatt 45585748  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagtagt 351  Q
     ||||||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  45585747 gaatgaatctaaaaagttaattttttcttataaataggaccggaggtagtagt 45585695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 199 - 351
Target Start/End: Complemental strand, 45589513 - 45589362
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||||||||| |    
T  45589513 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattatt 45589415  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagtagt 351  Q
     ||||||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  45589414 gaatgaatctaaaaagttaattttttcttataaataggaccggaggtagtagt 45589362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 199 - 351
Target Start/End: Complemental strand, 45593180 - 45593029
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||||||||| |    
T  45593180 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattatt 45593082  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagtagt 351  Q
     ||||||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  45593081 gaatgaatctaaaaagttaattttttcttataaataggaccggaggtagtagt 45593029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 199 - 351
Target Start/End: Complemental strand, 45596847 - 45596696
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||||||||| |    
T  45596847 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattatt 45596749  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagtagt 351  Q
     ||||||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  45596748 gaatgaatctaaaaagttaattttttcttataaataggaccggaggtagtagt 45596696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 199 - 351
Target Start/End: Complemental strand, 45600514 - 45600363
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||||||||| |    
T  45600514 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattatt 45600416  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagtagt 351  Q
     ||||||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  45600415 gaatgaatctaaaaagttaattttttcttataaataggaccggaggtagtagt 45600363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 199 - 351
Target Start/End: Complemental strand, 45604181 - 45604030
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||||||||| |    
T  45604181 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattatt 45604083  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagtagt 351  Q
     ||||||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  45604082 gaatgaatctaaaaagttaattttttcttataaataggaccggaggtagtagt 45604030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 199 - 351
Target Start/End: Complemental strand, 45607848 - 45607697
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||||||||| |    
T  45607848 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattatt 45607750  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagtagt 351  Q
     ||||||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  45607749 gaatgaatctaaaaagttaattttttcttataaataggaccggaggtagtagt 45607697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 199 - 351
Target Start/End: Complemental strand, 45611515 - 45611364
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||||||||| |    
T  45611515 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattatt 45611417  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagtagt 351  Q
     ||||||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  45611416 gaatgaatctaaaaagttaattttttcttataaataggaccggaggtagtagt 45611364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 199 - 351
Target Start/End: Complemental strand, 45615182 - 45615031
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||||||||| |    
T  45615182 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattatt 45615084  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagtagt 351  Q
     ||||||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  45615083 gaatgaatctaaaaagttaattttttcttataaataggaccggaggtagtagt 45615031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 11794598 - 11794463
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||||||| |||| || |||||| ||||| ||||||||||||||||||||||| |||||| || |  ||||| ||||| |    
T  11794598 tactccctccggtcctatttataagaaacattttacatttttgtttcatggcataaatgatgtatttgatctacattctataccaagtacattaattatt 11794499  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    |||| |||||||||| | || |||||||||||||||    
T  11794498 caataaatctaaaaaatcaattttttcttataaata 11794463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 210 - 313
Target Start/End: Complemental strand, 39118152 - 39118049
Alignment:
Q  210 gtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatcta 309  Q
    |||| |||||||| ||||| ||||||||||||||| |||| |||||| ||||||||| ||||||||||||| |||||| |||||||| |||||| |||||    
T  39118152 gtcttatttataaaaaatagttgacttttttgatttattgtataaattatgtatttggtctatattctagataagatatatcaattactcaatggatcta 39118053  T
Q  310 aaaa 313  Q
    ||||    
T  39118052 aaaa 39118049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 215 - 333
Target Start/End: Original strand, 33273985 - 33274103
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||| ||||||   |||||| ||||||| |||||||||||| | |||||||||||||||    
T  33273985 atttataagaaaactttgacttttttgattcattgtataaatgatatatttggcttatattttagacaacatacatcaattacttaatgaatctaaaaag 33274084  T
Q  315 ttaaatttttcttataaat 333  Q
    | ||| || | ||||||||    
T  33274085 taaaagttcttttataaat 33274103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 215 - 334
Target Start/End: Complemental strand, 36881660 - 36881547
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||| |||||| ||||||||||||||||||||| ||||||| ||| ||||| ||||||||      ||||||||| ||||| |||||| ||||||||||    
T  36881660 atttacaagaaacatttgacttttttgattcattacataaataatgaatttggtctatatt------aagatacattaattactcaatgtatctaaaaag 36881567  T
Q  315 ttaaatttttcttataaata 334  Q
    | ||||||||||||||||||    
T  36881566 tcaaatttttcttataaata 36881547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 218 - 313
Target Start/End: Original strand, 3837428 - 3837523
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||||||| |||||||| || |||||||| |||||||| |||||| ||| |||||    
T  3837428 tataagaaacatttgatttttttgattcattgcataaataatgtatttggtctatattttaaacaagatagatcaattactcaatgcatcgaaaaa 3837523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 3838417 - 3838551
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||||||||| |||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||||| |  ||||||||| | |    
T  3838417 tacttcctccagtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctagacgaagtacatcaatcatt 3838515  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
     ||||||||||||||||||| |||||||||||||||    
T  3838516 gaatgaatctaaaaagttaactttttcttataaata 3838551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 45034546 - 45034412
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| ||||||   || ||||||||||| |    
T  45034546 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggttaggtacatcaattatt 45034448  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
     ||||||||||||||||||| |||||||||||||||    
T  45034447 gaatgaatctaaaaagttaactttttcttataaata 45034412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 11182183 - 11182289
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    |||||| || ||||||||||||||||||||| |||||||||||||||||||  |||||||| |  | |||||||||||| ||||| ||| ||||||||||    
T  11182183 tataagcaacatttgacttttttgattcattccataaatgatgtatttgattcatattctatatcatatacatcaattactcaataaatttaaaaagtta 11182282  T
Q  318 aattttt 324  Q
    | |||||    
T  11182283 atttttt 11182289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 215 - 331
Target Start/End: Original strand, 22333540 - 22333656
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctaga-caagatacatcaattaatcaatgaatctaaaaa 313  Q
    |||||||||||| |||  |||||||||||||||||||||||| |||||||||||||||||| || | |||| || || ||||| ||||||||||||||||    
T  22333540 atttataagaaacattaaacttttttgattcattgcataaataatgtatttgatctatattatatatcaag-tatattaattactcaatgaatctaaaaa 22333638  T
Q  314 gttaaatttttcttataa 331  Q
    || || ||||||| ||||    
T  22333639 gtcaattttttctaataa 22333656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 4063420 - 4063286
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||  ||||| |||||||  || ||||||||||| |    
T  4063420 tactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtattttgtctat-ttctagagtaggtacatcaattatt 4063322  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
     |||||||||||||| |||| |||||||||||||||    
T  4063321 gaatgaatctaaaaaattaactttttcttataaata 4063286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 32487123 - 32487052
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagat 286  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||  ||||||||||    
T  32487123 atttataagaagtatttgacttttttgattcattgcataaataatgtatttggtctatatcgtagacaagat 32487052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 4044593 - 4044708
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||||||||| | |||||||||||||| ||     
T  4044593 tataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaatttt 4044691  T
Q  318 aatttttcttataaata 334  Q
    | |||||||||||||||    
T  4044692 actttttcttataaata 4044708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 313
Target Start/End: Complemental strand, 2936426 - 2936328
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    |||||||||||| |||||||||||||||||||||| ||| ||||| |||||  ||||||||||| || |  ||||| ||||| ||||||||||| ||||    
T  2936426 atttataagaaacatttgacttttttgattcattggatagatgatatatttagtctatattctataccaagtacattaattactcaatgaatctcaaaa 2936328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 333
Target Start/End: Complemental strand, 15384575 - 15384442
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||||| |||||||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| | | || | || ||||||||||| |    
T  15384575 tacttcttccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctatttccaag-ctaggtacatcaattatt 15384477  T
Q  299 caatgaatctaaaaagttaaatttttcttataaat 333  Q
     ||| ||||||||||||||| ||||||||||||||    
T  15384476 aaataaatctaaaaagttaattttttcttataaat 15384442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 221 - 315
Target Start/End: Complemental strand, 37670445 - 37670351
Alignment:
Q  221 aagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    |||||| |||||| |||||| ||||||||||||||| || |||||| | ||||||||||| ||||| ||||||||| |||||  |||||||||||    
T  37670445 aagaaacatttgatttttttaattcattgcataaataatctatttggtatatattctagataagatgcatcaattattcaatatatctaaaaagt 37670351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 331
Target Start/End: Complemental strand, 41153244 - 41153128
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| | |||||||||| |||||||||  ||| ||||||||||| | |||| | ||||| | |||||||| |||  ||||||||| ||||||    
T  41153244 atttataagaaaaagttgactttttagattcattgagtaattgatgtatttggtttataatatagaccaaatacatcatttatgcaatgaatcaaaaaag 41153145  T
Q  315 ttaaatttttcttataa 331  Q
    | |||| ||||||||||    
T  41153144 tcaaatgtttcttataa 41153128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 202 - 265
Target Start/End: Complemental strand, 5559659 - 5559596
Alignment:
Q  202 ttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtattt 265  Q
    |||||||| ||  |||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  5559659 ttcctccgatcctatttataagacatatttgatttttttgattcattgcataaatgatgtattt 5559596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 349
Target Start/End: Complemental strand, 7833372 - 7833281
Alignment:
Q  258 atgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    |||||| ||||||||||| || |  |||||||||||||| |||||||||||||||| || | | ||||||||| |||||| |||||||||||    
T  7833372 atgtatctgatctatattttaaatcagatacatcaattattcaatgaatctaaaaaattgattgtttcttatatataagaccgaaggaagta 7833281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 5559425 - 5559377
Alignment:
Q  286 tacatcaattaatcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  5559425 tacatcaattactcaatgaatctaaaaagtcaaatttttcttataaata 5559377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 315
Target Start/End: Complemental strand, 920534 - 920448
Alignment:
Q  228 atttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    ||||||||||||||||| ||| ||||||| ||||||||  ||||||||||| ||||||||| | |||||  ||||| |||||||||||    
T  920534 atttgacttttttgatttatttcataaataatgtatttagtctatattctaaacaagatacgttaattacacaatg-atctaaaaagt 920448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 9152528 - 9152393
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||| ||||| |||||| | |||||||||| |||||||||  ||| |||||||| |  |||| | | ||||| | |||||||||||| |    
T  9152528 tactccctccggtcttatttacaagaaacaattgactttttagattcattgagtaattgatgtatctagtctaaaatatagaccaaatacatcaattatt 9152429  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
     ||||| || ||||||| |||| |||||| ||||||    
T  9152428 taatgactcaaaaaagtcaaatgtttcttgtaaata 9152393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 334
Target Start/End: Complemental strand, 12486125 - 12486006
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||| |||||| | |||||||||| ||||||||| |||| ||||||||||| |||||||||||| |    | ||| ||||| |||||||| ||||||||    
T  12486125 atttacaagaaacaattgactttttagattcattgaataattgatgtatttggtctatattctaggccgagtccataaattattcaatgaacctaaaaag 12486026  T
Q  315 ttaaatttttcttataaata 334  Q
    | || | |||||| ||||||    
T  12486025 tcaattctttcttgtaaata 12486006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 12962704 - 12962839
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||| ||| ||||| |||||||||||| | |||||||||| |||||||||  ||| | ||||| ||| | || | | ||||| | |||||||| |||      
T  12962704 tactttctcaggtcttatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggtataaaatatagaccaaatacatcatttatg 12962803  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||| ||||||| |||| |||||||||||||    
T  12962804 caatgaatcaaaaaagtcaaatgtttcttataaata 12962839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 334
Target Start/End: Complemental strand, 32457346 - 32457227
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| |||||||||||| ||||||||   ||| |||||||| |  |||| | | ||||| | |||||||| |||  ||||||||| ||||||    
T  32457346 atttataagaaaaatttgactttttagattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatgcaatgaatcaaaaaag 32457247  T
Q  315 ttaaatttttcttataaata 334  Q
    | |||| |||||||||||||    
T  32457246 tcaaatatttcttataaata 32457227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 345
Target Start/End: Original strand, 7833281 - 7833427
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||||||| |||||| || ||||||||| | |  | ||||| ||||||||| |||| |||||||| |||| || | | ||||  |||||||| || || |    
T  7833281 tacttccttcggtcttatatataagaaacaatcaattttttagattcattgaataattgatgtatctgatttaaaatatagatcagatacattaactatt 7833380  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaagga 345  Q
     ||| |||||||||| |||| | ||||||||| ||||||||||||||    
T  7833381 taataaatctaaaaaattaagtgtttcttatatataagatcgaagga 7833427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 349
Target Start/End: Complemental strand, 11030325 - 11030191
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| | || ||||||| |||||||||  ||| |||||||| |||| || | | ||||| | |||||||| |||   |||||||| ||||||    
T  11030325 atttataagaaaaaattaactttttagattcattgagtaattgatgtatctgatatagaatatagaccaaatacatcatttatgtaatgaatcaaaaaag 11030226  T
Q  315 ttaaatttttcttataaataagatcgaaggaagta 349  Q
    | |||| ||||||||| ||| ||||| ||||||||    
T  11030225 tcaaatgtttcttatatataggatcggaggaagta 11030191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 331
Target Start/End: Complemental strand, 3365406 - 3365292
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtat-ttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    |||||||||||| |||| ||||||||||||||| |||| | || ||| ||| | || ||  ||||  |||||||||| |||  ||||||| |||||||||    
T  3365406 ttataagaaataattgatttttttgattcattgaataattaatatatcttgttataaata-tagattagatacatcacttatacaatgaacctaaaaagt 3365308  T
Q  316 taaatttttcttataa 331  Q
    ||||||||||||||||    
T  3365307 taaatttttcttataa 3365292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 349
Target Start/End: Complemental strand, 7943589 - 7943438
Alignment:
Q  199 tacttcctccggtctaatttataagaaatat-ttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaa 297  Q
    |||| |||||||||  |||||||||||| |  |||||||||| ||||||||| |||| |||||||| |  |||| | | ||||| | ||| |||| |||     
T  7943589 tactccctccggtcctatttataagaaaaaaattgactttttagattcattgaataattgatgtatcttgtctacaatatagaccaaatatatcatttat 7943490  T
Q  298 tcaatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
     ||||||||  ||||||| |||| | |||||||||||||| || ||||||||    
T  7943489 gcaatgaataaaaaaagtcaaatatctcttataaataagaccggaggaagta 7943438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 331
Target Start/End: Complemental strand, 6971701 - 6971587
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| |||||||||||| | |||||||  |||||||||||| | |||||||||    |||| |||||| |||||  |||| ||| ||||||||     
T  6971701 ttataagaaacatttgactttttaggttcattgtgtaaatgatgtatctaatctatatttataacaatatacattaattatacaataaatttaaaaagtc 6971602  T
Q  317 aaatttttcttataa 331  Q
    || | ||||||||||    
T  6971601 aattgtttcttataa 6971587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 349
Target Start/End: Complemental strand, 41205639 - 41205489
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||||||| ||||  |||||||||| ||| || | ||||| |||  |||  |||| | ||||||||| | |||||| |  || |||||||| ||||| |    
T  41205639 tacttcctctggtcctatttataagagataattaattttttagatatattaaataatttatgtatttggtttatattttttactagatacataaattatt 41205540  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    ||||  ||||||||| | || ||| |||||||||||||| |||||||||||    
T  41205539 caatatatctaaaaaatcaactttctcttataaataagaccgaaggaagta 41205489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 346
Target Start/End: Original strand, 5109368 - 5109509
Alignment:
Q  205 ctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatga 304  Q
    ||||||||  |||||||||||| | || ||||||| |||||||||  ||| | ||||||||| | || | | ||| | | |||||| | |||  |  |||    
T  5109368 ctccggtcctatttataagaaaaagttaactttttagattcattgagtaattaatgtatttggtatagaatataggctaaatacataatttatactttga 5109467  T
Q  305 atctaaaaagttaaatttttcttataaataagatcgaaggaa 346  Q
    ||| ||||||| |||| |||||||||||||||||||||||||    
T  5109468 atcaaaaaagtcaaatatttcttataaataagatcgaaggaa 5109509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 12226317 - 12226378
Alignment:
Q  119 tttttgtgtatggtacaaaactgaccttttcactattaatttattgttaaaatcttcaatgg 180  Q
    |||||||||||||||||||| ||| |||||||| ||| ||||||| ||||| | ||||||||    
T  12226317 tttttgtgtatggtacaaaaatgaacttttcaccattgatttattattaaattattcaatgg 12226378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 334
Target Start/End: Complemental strand, 32750457 - 32750356
Alignment:
Q  233 acttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaa 332  Q
    ||||||| ||| |||| ||||| | ||||||||||| || ||||| ||| ||||||||  |||| |||||| ||||||||||| || ||| |||| ||||    
T  32750457 actttttagatacattacataatttatgtatttgatttagattcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttgtaaa 32750358  T
Q  333 ta 334  Q
    ||    
T  32750357 ta 32750356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 342
Target Start/End: Complemental strand, 27306777 - 27306717
Alignment:
Q  282 aagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataagatcgaa 342  Q
    ||||||||| ||||| |||||||| ||||||||| || ||||||||||||  |||||||||    
T  27306777 aagatacattaattattcaatgaacctaaaaagtcaactttttcttataataaagatcgaa 27306717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 349
Target Start/End: Complemental strand, 40430809 - 40430665
Alignment:
Q  205 ctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatga 304  Q
    ||||||||  |||||||||| | | || ||||||| ||| ||||  |||| | ||||||||| | ||  |||| ||| ||||||||  |||| | ||||     
T  40430809 ctccggtcctatttataagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattgaatgt 40430710  T
Q  305 atctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    ||||||||||| || ||| ||||||||||| ||||||||| ||||    
T  40430709 atctaaaaagtcaattttctcttataaataggatcgaagggagta 40430665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 315
Target Start/End: Complemental strand, 3037838 - 3037756
Alignment:
Q  235 ttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaat--taatcaatgaatctaaaaagt 315  Q
    ||||| ||||||||| |||| | ||||||||| | ||||||||||||  |||||||||||  || |||||| |||||||||||    
T  3037838 tttttagattcattgaataatttatgtatttggtgtatattctagaccggatacatcaattatattcaatgtatctaaaaagt 3037756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 334
Target Start/End: Complemental strand, 7765927 - 7765808
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||| | | || ||||||| ||| ||||  |||||| ||||||||||| ||  |||| ||| ||||||||  |||| |||||| ||||||||||    
T  7765927 atttataagagacaatttactttttagatacattaaataaattatgtatttgatttaggttcttgactagatacatacattattcaatgtatctaaaaag 7765828  T
Q  315 ttaaatttttcttataaata 334  Q
    | || ||| |||| ||||||    
T  7765827 tcaactttctcttgtaaata 7765808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 12485992 - 12486126
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| ||||||||||| |||| |||||| | |||||||||| | ||||||| |||| | ||| | | |  ||| | | ||||| | |||||||||||| |    
T  12485992 tactccctccggtcta-tttacaagaaagaattgactttttaggttcattgaataatttatggactcggcctagaatatagaccaaatacatcaattatt 12486090  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||||||||||| || | |||||| ||||||    
T  12486091 caatgaatctaaaaagtcaattgtttcttgtaaata 12486126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 337
Target Start/End: Original strand, 20427059 - 20427138
Alignment:
Q  258 atgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataaga 337  Q
    ||||||||||| ||  |||| ||| ||||||||  |||| |||||| ||||||||||| || ||| ||||||||||||||    
T  20427059 atgtatttgatttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaattttctcttataaataaga 20427138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 331
Target Start/End: Original strand, 23377974 - 23378069
Alignment:
Q  236 tttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    |||| ||||||||  || |||||||||| |||||| |||| ||||  | |||||||| ||||| |||||||||||||  |||| |||| |||||||    
T  23377974 ttttagattcattcaattaatgatgtatatgatctttattgtagatcacatacatcatttaataaatgaatctaaaatattaatttttgcttataa 23378069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 349
Target Start/End: Original strand, 28014303 - 28014422
Alignment:
Q  230 ttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttat 329  Q
    |||||||||| ||||||||| |||| |  ||||| |  |||||| | ||||| | |||||||| |||  ||||||||  |||| || |||| ||||||||    
T  28014303 ttgactttttagattcattgtataattattgtatcttgtctatagtatagaccaaatacatcatttatgcaatgaataaaaaaggtcaaatgtttcttat 28014402  T
Q  330 aaataagatcgaaggaagta 349  Q
    ||||| ||||| ||||||||    
T  28014403 aaataggatcggaggaagta 28014422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 334
Target Start/End: Complemental strand, 28249066 - 28248947
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| | |||||||||| ||||||||  |||| | ||||||||| | || | | ||||| | |||||| | |||  |||| |||| ||||||    
T  28249066 atttataagaaaaagttgactttttagattcattaaataattaatgtatttggtatagaatatagactaaatacattatttatgcaattaatcaaaaaag 28248967  T
Q  315 ttaaatttttcttataaata 334  Q
    | |||| |||||||||||||    
T  28248966 tcaaatatttcttataaata 28248947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 339
Target Start/End: Complemental strand, 43135156 - 43135041
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| | || |||||||||||| |||  |||| |||||||||||||||||        | | |||| ||||||| | ||||||||||||||     
T  43135156 atttataagaaacaattcacttttttgatttattaaataattgatgtatttgatctat--------ctatatacgtcaattatttaatgaatctaaaaaa 43135065  T
Q  315 ttaaatttttcttataaataagatc 339  Q
    || ||||||||||||||||| ||||    
T  43135064 tt-aatttttcttataaataggatc 43135041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 199 - 349
Target Start/End: Complemental strand, 44736928 - 44736777
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||||||| ||||   |||| |||||| | |||||||||| ||| | ||  |||||| |||||||||   || ||||||| | |||| ||| |||||||    
T  44736928 tacttcctctggtcctttttacaagaaacaattgactttttagatacgttagataaattatgtatttggcttagattctagtctagatgcataaattaat 44736829  T
Q  299 caatgaatctaaaaagttaaatt-tttcttataaataagatcgaaggaagta 349  Q
    ||||  |||||||||  |||||| |||||| |||||| ||||| ||||||||    
T  44736828 caatatatctaaaaaagtaaattgtttcttgtaaataggatcggaggaagta 44736777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 6458593 - 6458658
Alignment:
Q  258 atgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaattttt 324  Q
    |||||||||||||||||| ||||  | |||||  ||||||||||| |||||||||| ||||||||||    
T  6458593 atgtatttgatctatattatagatcaaatacaaaaattaatcaataaatctaaaaa-ttaaattttt 6458658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 345
Target Start/End: Original strand, 10204942 - 10205071
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| |||| ||||||| |||||||||   || |||||||| |  |||| | | ||||| | |||||||| |||  ||||||||| ||| ||    
T  10204942 atttataagaaa-attttactttttagattcattgagcaattgatgtatcttgtctaaaatatagactaaatacatcatttatacaatgaatcaaaagag 10205040  T
Q  315 ttaaatttttcttataaataagatcgaagga 345  Q
    | |||| ||||||||||||| ||||| ||||    
T  10205041 tcaaatatttcttataaataggatcggagga 10205071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 14803130 - 14803068
Alignment:
Q  251 ataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    |||| |||||||||||||||||||| ||||  | |||||||||||| || || ||||||||||    
T  14803130 ataattgatgtatttgatctatattatagatcaaatacatcaattattctataaatctaaaaa 14803068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 1961359 - 1961436
Alignment:
Q  254 aatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    |||||||||| || ||| |||| ||||| | |||||||| ||||| ||||||||||||| ||| | |||| |||||||    
T  1961359 aatgatgtatatggtctttattatagaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataa 1961436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 331
Target Start/End: Complemental strand, 15119867 - 15119790
Alignment:
Q  254 aatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    |||||||||| |  ||| |||| ||||| | |||||||| ||||| ||||||||||||| ||||| |||| |||||||    
T  15119867 aatgatgtatattgtctttattatagaccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataa 15119790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 342
Target Start/End: Complemental strand, 22333656 - 22333531
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||| ||||| | |||||||||| |||||||||  ||| | || || ||||| |||| | ||||  | |||||| | |||  ||||||||| ||||||||    
T  22333656 ttattagaaaaaattgactttttagattcattgagtaattaatatacttgatatataatatagatcaaatacattatttatgcaatgaatcaaaaaagtt 22333557  T
Q  317 aaatttttcttataaataagatcgaa 342  Q
     ||| ||||||||||||| |||||||    
T  22333556 taatgtttcttataaataggatcgaa 22333531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 262
Target Start/End: Complemental strand, 29060280 - 29060239
Alignment:
Q  221 aagaaatatttgacttttttgattcattgcataaatgatgta 262  Q
    |||||| |||| |||| |||||||||||||||||||||||||    
T  29060280 aagaaacatttaacttctttgattcattgcataaatgatgta 29060239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 334
Target Start/End: Complemental strand, 45065695 - 45065594
Alignment:
Q  233 acttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaa 332  Q
    ||||||| ||| ||||  |||| | |||||||| || || ||||||||| ||||||||  |||| |||||| ||||||||||| || ||| | |||||||    
T  45065695 actttttagatacattaaataatttatgtatttaatttagattctagactagatacatacattattcaatgtatctaaaaagtcaactttcttttataaa 45065596  T
Q  333 ta 334  Q
    ||    
T  45065595 ta 45065594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 315
Target Start/End: Original strand, 6761464 - 6761580
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  ||||| |||| | | || ||||||| ||| ||||| |||| | ||||||||| | ||| |||| ||| ||||||||  |||| |    
T  6761464 tactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttatgttcttgactagatacatacattatt 6761563  T
Q  299 caatgaatctaaaaagt 315  Q
    ||||| |||||||||||    
T  6761564 caatgtatctaaaaagt 6761580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 13021772 - 13021716
Alignment:
Q  277 tagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaat 333  Q
    ||||| |||||||| | ||| | ||||||||||||||||||| ||| ||||||||||    
T  13021772 tagactagatacataatttattaaatgaatctaaaaagttaactttctcttataaat 13021716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 313
Target Start/End: Original strand, 15492707 - 15492802
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    |||||||||| |||||| ||||| |||| |||| |||| |||| ||||||||||||| | |||   |||||||| ||||| ||||| ||| ||||||    
T  15492707 ttataagaaa-atttgattttttagattgattgaataactgatttatttgatctataatataggttagatacataaattattcaataaatttaaaaa 15492802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 23143533 - 23143613
Alignment:
Q  251 ataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||||||||||||||||||| ||| | ||| | |||||||| ||| | ||| || |||||||||| | |||| |||||||    
T  23143533 ataaatgatgtatttgatctacattatggaccaaatacatcatttattgaataaacctaaaaagttgatttttgcttataa 23143613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 23555323 - 23555403
Alignment:
Q  251 ataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||||||||||||||||||| ||| | ||| | |||||||| ||| | ||| || |||||||||| | |||| |||||||    
T  23555323 ataaatgatgtatttgatctacattatggaccaaatacatcatttattgaataaacctaaaaagttgatttttgcttataa 23555403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 343
Target Start/End: Complemental strand, 30758852 - 30758725
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| |||||||||||| |||| ||||  ||| |||||||| |  |||| | | ||||| | ||||| || |||  ||||||||  ||||||    
T  30758852 atttataagaaaaatttgactttttagatt-attgagtaattgatgtatcttgtctaaagtatagaccaaatacaccatttatgcaatgaataaaaaaag 30758754  T
Q  315 ttaaatttttcttataaataagatcgaag 343  Q
    | |||| ||||||||||||| || |||||    
T  30758753 tcaaatatttcttataaataggaccgaag 30758725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 331
Target Start/End: Original strand, 31570997 - 31571085
Alignment:
Q  243 ttcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||||| |||||||||||||||||  |||||| |||   | ||| |||||||| ||||| ||||||||| || || |||| |||||||    
T  31570997 ttcattgaataaatgatgtatttgaattatattataggacacatatatcaattattcaataaatctaaaaggtaaatttttacttataa 31571085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #100
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 33727075 - 33727122
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtattt 265  Q
    ||||||||||||||||| ||||||  ||||||| |||||||||||||||    
T  33727075 ttataagaaatatttga-ttttttttttcattgtataaatgatgtattt 33727122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #101
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 41823763 - 41823859
Alignment:
Q  226 atatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaattt 322  Q
    ||||||| ||||||  |||||||  || ||||||||||||||| |||||| ||||| | |||||||| | | | |||||| ||||||| ||| ||||    
T  41823763 atatttgtctttttaaattcatttaattaatgatgtatttgatttatattatagaccacatacatcattaattaaatgaacctaaaaaattatattt 41823859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #102
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 315
Target Start/End: Original strand, 44587682 - 44587754
Alignment:
Q  243 ttcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    ||||||| ||||||||||||| || ||||||||   ||| | |||||||| | | ||||||||||||||||||    
T  44587682 ttcattgaataaatgatgtatgtggtctatattgatgaccacatacatcactcattcaatgaatctaaaaagt 44587754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 2e-46; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 215 - 349
Target Start/End: Complemental strand, 54537576 - 54537442
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||    
T  54537576 atttataagaaattattgacttttttgattcattgcataaattgtgtatttgatctatattctagactagatacatcaattactcaatgaatcttaaaag 54537477  T
Q  315 ttaaatttttcttataaataagatcgaaggaagta 349  Q
    | |||||||||||||||||| ||||||||| ||||    
T  54537476 tcaaatttttcttataaataggatcgaagggagta 54537442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 215 - 343
Target Start/End: Complemental strand, 44518169 - 44518041
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||||||||||  |||||||||||||||||||||  ||||||||||||||| |||||||| |||||||||||||| ||||| |||||||||||||||||    
T  44518169 atttataagaaaactttgacttttttgattcattgtctaaatgatgtatttggtctatattttagacaagatacattaattactcaatgaatctaaaaag 44518070  T
Q  315 ttaaatttttcttataaataagatcgaag 343  Q
    | ||| |||||||||||||| ||||||||    
T  44518069 tcaaagttttcttataaataggatcgaag 44518041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 215 - 335
Target Start/End: Complemental strand, 52865084 - 52864964
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| |||||  |||||||| |||| ||||||||||||||| |||||||||||||||||    
T  52865084 atttataaaaaataattgacttttttgattcattgcataaatgatatatttagtctatattttagataagatacatcaattactcaatgaatctaaaaag 52864985  T
Q  315 ttaaatttttcttataaataa 335  Q
    |||||||||||| ||||||||    
T  52864984 ttaaatttttctcataaataa 52864964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 21663035 - 21662900
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||| |||| || |  ||||| ||||| |    
T  21663035 tactccctccggtcttatttataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctataatctataccaagtacattaattact 21662936  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||||||||||| || |||||||||||||||    
T  21662935 caatgaatctaaaaagtcaactttttcttataaata 21662900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 215 - 339
Target Start/End: Complemental strand, 43449091 - 43448967
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||||||||||| | |||||  ||||||||||| |||||||| ||||||||||||||||     
T  43449091 atttataagaaatatttgatttttttggttcattgtataaatgatgtatttggtttatatcatagacaagatatatcaattactcaatgaatctaaaaaa 43448992  T
Q  315 ttaaatttttcttataaataagatc 339  Q
    | || ||||||||||||||| ||||    
T  43448991 tcaactttttcttataaataggatc 43448967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 45010765 - 45010884
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||| | || ||||||||||| || |||||||||||||| ||||| ||||||||||     
T  45010765 atttataagaaatatttgacttttttgatttattgtataaatgatgtttgtggtctatattctaaactagatacatcaattattcaataaatctaaaaaa 45010864  T
Q  315 ttaaatttttcttataaata 334  Q
    |||| ||| |||||||||||    
T  45010865 ttaattttctcttataaata 45010884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 208 - 334
Target Start/End: Original strand, 23222966 - 23223091
Alignment:
Q  208 cggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatc 307  Q
    |||||| |||||||||||| ||||||||||||| ||| |||  |||||||||||||||| |||||||| |||||||||||||||| ||| ||||||||||    
T  23222966 cggtcttatttataagaaacatttgacttttttaatttattatataaatgatgtatttggtctatattttagacaagatacatcagttactcaatgaatc 23223065  T
Q  308 taaaaagttaaatttttcttataaata 334  Q
    |||||| | || |||||||||||||||    
T  23223066 taaaaa-tcaattttttcttataaata 23223091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 199 - 351
Target Start/End: Original strand, 53441906 - 53442058
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||||||| |||| |||||||||||||||||||||||||||||||||| | || |||||| || |  ||||| ||||| |    
T  53441906 tactccctccggtcctatttataagaaacattttacttttttgattcattgcataaatgatgtatttggtatacattctataccaagtacattaattatt 53442005  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagtagt 351  Q
    |||||||| |||||||| || ||||||||||||||| || || ||| ||||||    
T  53442006 caatgaatttaaaaagtcaactttttcttataaataggaccggagggagtagt 53442058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 215 - 334
Target Start/End: Complemental strand, 36985289 - 36985170
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||| |||||  |||| ||||| ||||     
T  36985289 atttataagaaatttttgacttttttgattcattgcataaataatgtatttagtctatattctaaacaagatacattaattatacaataaatcttaaaaa 36985190  T
Q  315 ttaaatttttcttataaata 334  Q
    ||||  ||||||||||||||    
T  36985189 ttaacattttcttataaata 36985170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 215 - 334
Target Start/End: Complemental strand, 37010728 - 37010609
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||| |||||  |||| ||||| ||||     
T  37010728 atttataagaaatttttgacttttttgattcattgcataaataatgtatttagtctatattctaaacaagatacattaattatacaataaatcttaaaaa 37010629  T
Q  315 ttaaatttttcttataaata 334  Q
    ||||  ||||||||||||||    
T  37010628 ttaacattttcttataaata 37010609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 215 - 313
Target Start/End: Original strand, 25954037 - 25954135
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    ||||||||||||| |||||||||||| |||||||  ||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||| ||||||    
T  25954037 atttataagaaatgtttgacttttttaattcattatataaatgatatatttgatctatattctagacaagatacattaattactcaatgaatttaaaaa 25954135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 208 - 340
Target Start/End: Complemental strand, 9236227 - 9236094
Alignment:
Q  208 cggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatc 307  Q
    |||||| || |||| |||||||||||||||||||||||||| |||||||||| |||||  ||||||||||| |  |||||||||||||| ||||||||||    
T  9236227 cggtcttatatatacgaaatatttgacttttttgattcattacataaatgatatatttagtctatattctatatcagatacatcaattactcaatgaatc 9236128  T
Q  308 taaaaagttaa-atttttcttataaataagatcg 340  Q
     ||||||||||  |||||||||||| || |||||    
T  9236127 aaaaaagttaacttttttcttataagtaggatcg 9236094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 199 - 351
Target Start/End: Complemental strand, 51517106 - 51516955
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattcta-gacaagatacatcaattaa 297  Q
    |||| |||||||||  |||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||| | |||| ||||| |||||     
T  51517106 tactccctccggtcctatttataagaaacatttgacttttttggttcattgcataaatgatgtatttggtctatattctatgccaag-tacattaattac 51517008  T
Q  298 tcaatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagtagt 351  Q
    || || |||||||||||| || ||||||||||||||| || || ||| ||||||    
T  51517007 tccat-aatctaaaaagtcaactttttcttataaataggaccggagggagtagt 51516955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 35099070 - 35099189
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||||||||||||||| |||||||| ||| |||| |||||||||||||||| |||||||||||||||||||| || |||||  |||| ||| ||||| |    
T  35099070 atttataagaaatatttaacttttttaatttattgtataaatgatgtatttggtctatattctagacaagatatattaattacacaataaatttaaaagg 35099169  T
Q  315 ttaaatttttcttataaata 334  Q
    | || |||||||||||||||    
T  35099170 tcaactttttcttataaata 35099189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 199 - 320
Target Start/End: Complemental strand, 8266380 - 8266261
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||||||| |||||||||||||||||||||| |||||| |||| ||||   |||||| |||| || |||||||||||| |    
T  8266380 tactccctccggtcctatttataagaaacatttgacttttttgattcattgtataaataatgtgtttg--gtatattttagataaaatacatcaattact 8266283  T
Q  299 caatgaatctaaaaagttaaat 320  Q
    ||||||||||||||||||||||    
T  8266282 caatgaatctaaaaagttaaat 8266261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 220 - 334
Target Start/End: Original strand, 12747717 - 12747831
Alignment:
Q  220 taagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaa 319  Q
    ||||||| |||||| ||||||||||||||||||||||  |||||||| | |||||||||||| | |||||||||||| || ||||||||||||| | ||     
T  12747717 taagaaacatttgatttttttgattcattgcataaattgtgtatttggtgtatattctagaccaaatacatcaattactcgatgaatctaaaaaatcaat 12747816  T
Q  320 tttttcttataaata 334  Q
    |||||||||||||||    
T  12747817 tttttcttataaata 12747831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 199 - 332
Target Start/End: Original strand, 12064908 - 12065041
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  | |||||||||| |||| |||||||||||||||||||| ||||||||||||| ||||||||||| || | ||| || ||||| |    
T  12064908 tactccctccggtcctacttataagaaacattttacttttttgattcattgcattaatgatgtatttggtctatattctatactaaatatattaattact 12065007  T
Q  299 caatgaatctaaaaagttaaatttttcttataaa 332  Q
     ||||||| |||||||| || |||||||||||||    
T  12065008 taatgaatttaaaaagtcaattttttcttataaa 12065041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 19649594 - 19649713
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||| |||||| |||||||||||||||||||||| |||| ||||||||||  |||||||| |||||   |||||||||||| ||||||||||||||||     
T  19649594 atttacaagaaacatttgacttttttgattcattgaataattgatgtatttagtctatattttagaccgaatacatcaattactcaatgaatctaaaaaa 19649693  T
Q  315 ttaaatttttcttataaata 334  Q
    | |||| |||||| ||||||    
T  19649694 tcaaatgtttcttgtaaata 19649713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 29457839 - 29457973
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||||||||| |||  || ||||||||| | || ||||||||||||||||| |||  ||||||||||| ||||| |||||||| || ||||||||| | |    
T  29457839 tacttcctccagtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctagactaggtacatcaatcatt 29457937  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
     ||||||||||||||||||| |||||||||||||||    
T  29457938 gaatgaatctaaaaagttaactttttcttataaata 29457973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 43343579 - 43343449
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgt-----atttgatctatattctagacaagatacatcaattaatcaatgaatcta 309  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||     | ||| |||||||||||||  |||||||| |||||  |||| ||||||    
T  43343579 atttataagaaacatttgacttttttgattcattgtataaatgatgtacaccaattggtctatattctagagtagatacattaattacgcaattaatcta 43343480  T
Q  310 aaaagttaaatttttcttataaataagatcg 340  Q
    |||||| || ||||||||||||||| |||||    
T  43343479 aaaagtcaattttttcttataaatatgatcg 43343449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 218 - 351
Target Start/End: Complemental strand, 49885508 - 49885376
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    ||||||||| | || |||||||||||| | || |||| ||||||||||| ||||| |||||||| |||||||||||||| | |||||||||||||| |||    
T  49885508 tataagaaacaatttacttttttgattaagtggataattgatgtatttggtctat-ttctagactagatacatcaattattgaatgaatctaaaaaatta 49885410  T
Q  318 aatttttcttataaataagatcgaaggaagtagt 351  Q
    | |||||||||||||||  |||| ||| ||||||    
T  49885409 attttttcttataaatagaatcggaggtagtagt 49885376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 9197096 - 9197164
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaa 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  9197096 atttataagaaatatttgacttttttgattcattgcataaatgatgtattttgtctatattctaaacaa 9197164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 20028486 - 20028603
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||  | |  || || ||||| ||||||||||| |||||    
T  20028486 atttataaaaaatatttgactttttt-attcatttcataaatgatgtatttgatctatattctatcccaagtatattaattattcaatgaatct-aaaag 20028583  T
Q  315 ttaaatttttcttataaata 334  Q
    |||  |||||||||||||||    
T  20028584 ttagctttttcttataaata 20028603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 223 - 342
Target Start/End: Complemental strand, 51723503 - 51723384
Alignment:
Q  223 gaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaattt 322  Q
    |||| |||| ||||||||||||||||| ||||||||| |||||  ||||||||||| |  | |||||| ||||| |||||||||||||||| | || |||    
T  51723503 gaaaaatttaacttttttgattcattgtataaatgatatatttagtctatattctatatcaaatacattaattactcaatgaatctaaaaaatcaacttt 51723404  T
Q  323 ttcttataaataagatcgaa 342  Q
    |||||||||||| |||||||    
T  51723403 ttcttataaataggatcgaa 51723384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 246 - 358
Target Start/End: Complemental strand, 40460448 - 40460335
Alignment:
Q  246 attgcataaatgatgtatttgatctatattctagacaagatacatc-aattaatcaatgaatctaaaaagttaaatttttcttataaataagatcgaagg 344  Q
    |||| |||||||||||||||| |||||||| || |||||||||||  |||||  |||||||||||||||||||| |||||||||||||||||| || | |    
T  40460448 attgtataaatgatgtatttggtctatattttaaacaagatacatttaattacacaatgaatctaaaaagttaattttttcttataaataagaccggatg 40460349  T
Q  345 aagtagtagataaa 358  Q
    ||||| ||| ||||    
T  40460348 aagtattagttaaa 40460335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 199 - 337
Target Start/End: Original strand, 21662885 - 21663023
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||||||| | |||||||||| |||||||||  ||| | ||||| ||| | || ||| ||||| | |||||||| |||      
T  21662885 tactccctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggtatagattatagaccaaatacatcatttatg 21662984  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataaga 337  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  21662985 caatgaatcaaaaaagttaaatgtttcttataaataaga 21663023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 233 - 334
Target Start/End: Original strand, 53357321 - 53357423
Alignment:
Q  233 acttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat-caatgaatctaaaaagttaaatttttcttataa 331  Q
    |||||||| ||| |||||||||||||| |||||| |||||||||||||||||||| |||||||| | |||| |||||||||||| ||  |||||||| ||    
T  53357321 acttttttaatttattgcataaatgatatatttggtctatattctagacaagatagatcaattactccaataaatctaaaaagtcaatgttttcttacaa 53357420  T
Q  332 ata 334  Q
    |||    
T  53357421 ata 53357423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 13622502 - 13622595
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatct 308  Q
    |||||||||||| |||||||||||||  ||||||||||||||||| |||||| |||||||| || ||||||||||| || ||  ||||||||||    
T  13622502 atttataagaaacatttgacttttttagttcattgcataaatgatatatttggtctatattttacacaagatacattaactacacaatgaatct 13622595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 215 - 331
Target Start/End: Original strand, 25910206 - 25910322
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| ||||||  ||||| ||||| ||||||||  ||||||||| ||||||||||| || | |||||| ||||| ||||| ||| |||||||    
T  25910206 atttataagaaacatttgagattttttattcactgcataaagaatgtatttggtctatattctacaccaaatacattaattactcaataaatttaaaaag 25910305  T
Q  315 ttaaatttttcttataa 331  Q
    | || ||||||||||||    
T  25910306 tcaactttttcttataa 25910322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 28406466 - 28406601
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  ||||| |||||| | |||||||||| ||||| ||| |||| | ||||||||| ||||||||||||||  | ||||| ||||| |    
T  28406466 tactccctccggtcctatttacaagaaacaattgactttttagattcgttgaataattaatgtatttggtctatattctagaccgggtacataaattatt 28406565  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||| ||||||||| || | |||||| ||||||    
T  28406566 caatgaacctaaaaagtcaattgtttcttgtaaata 28406601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 315
Target Start/End: Original strand, 32711235 - 32711317
Alignment:
Q  233 acttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    ||||||| | ||||||| |||| |||||||||||  ||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  32711235 actttttaggttcattgaataattgatgtatttggcctatattatagaccagatacatcaattattcaatgaatctaaaaagt 32711317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 2544586 - 2544489
Alignment:
Q  221 aagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctaga-caagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    |||||| | |||||||||| ||||||||| |||| ||||||||||| |||||| | || | |||||||||||||||| |||||||| |||||||||||    
T  2544586 aagaaacaattgactttttagattcattgtataagtgatgtatttggtctataatttataacaagatacatcaattattcaatgaacctaaaaagtta 2544489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 335
Target Start/End: Complemental strand, 19649712 - 19649592
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||| |||||| |||||| ||||| |||||||||  ||| ||||||||| | |||| | | ||||| | |||||||||||| |||||||||| ||||||    
T  19649712 atttacaagaaacatttgattttttagattcattgagtaattgatgtattcggtctaaaatatagactaaatacatcaattattcaatgaatcaaaaaag 19649613  T
Q  315 ttaaatttttcttataaataa 335  Q
    | |||| |||||| |||||||    
T  19649612 tcaaatgtttcttgtaaataa 19649592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 349
Target Start/End: Complemental strand, 33372003 - 33371860
Alignment:
Q  205 ctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatga 304  Q
    ||||||||  || ||||||||||| || | ||||||||||||||| |||  ||||||||||| ||||| || ||| | || ||||||||||| | ||| |    
T  33372003 ctccggtcctatatataagaaataatttatttttttgattcattgaatagttgatgtatttggtctatttt-taggctaggtacatcaattattgaataa 33371905  T
Q  305 atctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    || |||||| |||| ||||||||||||||| ||||| ||| ||||    
T  33371904 atttaaaaaattaactttttcttataaatatgatcggaggtagta 33371860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 343
Target Start/End: Original strand, 33808325 - 33808452
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||| |||||||||| |||||| ||| ||||||||||| || || ||| || ||||||||  | | |||||||||||| ||||| ||| |||||||    
T  33808325 atttataaaaaatatttgattttttttatttattgcataaataatatacttggtcaatattctaatccaaatacatcaattattcaattaatttaaaaag 33808424  T
Q  315 ttaaatttttcttataaataagatcgaag 343  Q
     | ||||||||||||||||| || |||||    
T  33808425 -tcaatttttcttataaataggaccgaag 33808452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 315
Target Start/End: Complemental strand, 48593255 - 48593175
Alignment:
Q  235 ttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    ||||| ||||||||| |||| | ||||||||| ||||||||||||||  ||||||||||||| |||||| |||||||||||    
T  48593255 tttttagattcattgaataatttatgtatttggtctatattctagacccgatacatcaattattcaatgtatctaaaaagt 48593175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 271 - 333
Target Start/End: Complemental strand, 16295463 - 16295401
Alignment:
Q  271 atattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaat 333  Q
    |||||||||||||||||||||||||| ||||| ||||||| ||||| || |||||||||||||    
T  16295463 atattctagacaagatacatcaattattcaataaatctaagaagttgaagttttcttataaat 16295401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 337
Target Start/End: Complemental strand, 40198541 - 40198406
Alignment:
Q  202 ttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaa 301  Q
    |||||||||||| |||||||  ||| | |||||||||| |||| |||| | || |||||||| || || |||||||||||   |||||| ||||| ||||    
T  40198541 ttcctccggtcttatttatagtaaacaattgactttttagatttattgaacaattgatgtatctggtcgatattctagaccgaatacataaattattcaa 40198442  T
Q  302 tgaatctaaaaagttaaatttttcttataaataaga 337  Q
    |||||  ||||| | || | ||||||||||||||||    
T  40198441 tgaataaaaaaattcaattgtttcttataaataaga 40198406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 331
Target Start/End: Original strand, 44118200 - 44118314
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    ||||| ||||||||||||||||| |||||||||  |||||||||||| |  ||||||||    |||| |||||| |||||   ||||||||||||||||     
T  44118200 ttataggaaatatttgactttttagattcattgtgtaaatgatgtatctagtctatatttataacaatatacattaattatataatgaatctaaaaagtc 44118299  T
Q  317 aaatttttcttataa 331  Q
    || | ||||||||||    
T  44118300 aattgtttcttataa 44118314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 205 - 259
Target Start/End: Complemental strand, 50354379 - 50354325
Alignment:
Q  205 ctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgat 259  Q
    ||||||||  |||||||| |||||||||| |||||||||||||||||||||||||    
T  50354379 ctccggtcctatttataaaaaatatttgatttttttgattcattgcataaatgat 50354325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 337
Target Start/End: Complemental strand, 8987853 - 8987740
Alignment:
Q  224 aaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttt 323  Q
    |||||||||||||||| ||| ||||  |||| | ||||||||| | || ||||||||| | |||||| | ||| |||||| ||||||||| |||| | ||    
T  8987853 aaatatttgactttttagatacattcaataatttatgtatttggtttaaattctagaccaaatacataagttattcaatgcatctaaaaaattaattatt 8987754  T
Q  324 tcttataaataaga 337  Q
    | ||||||||||||    
T  8987753 tattataaataaga 8987740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 47505304 - 47505231
Alignment:
Q  259 tgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaa 332  Q
    |||||||||||||||||||| ||||||||||| ||||| | ||||||| |||| ||| ||  ||||||||||||    
T  47505304 tgtatttgatctatattctaaacaagatacattaattagtaaatgaatgtaaagagtcaatattttcttataaa 47505231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 334
Target Start/End: Complemental strand, 53442058 - 53441921
Alignment:
Q  197 actacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaatta 296  Q
    |||||| |||||||||  |||||||||||| | ||||||||||  |||||||| |||| | ||||| ||| | || | | || || | |||||||| |||    
T  53442058 actactccctccggtcctatttataagaaaaagttgactttttaaattcattgaataattaatgtacttggtatagaatgtataccaaatacatcattta 53441959  T
Q  297 atcaatgaatctaaaaagttaaatttttcttataaata 334  Q
      ||||||||| ||||||| |||| |||||||||||||    
T  53441958 tgcaatgaatcaaaaaagtaaaatgtttcttataaata 53441921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 5177851 - 5177899
Alignment:
Q  286 tacatcaattaatcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||||| | ||||||||||||||||||| |||||||||||||||    
T  5177851 tacatcaattattgaatgaatctaaaaagttaattttttcttataaata 5177899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 236 - 332
Target Start/End: Complemental strand, 29290890 - 29290794
Alignment:
Q  236 tttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaa 332  Q
    ||||| |||||||| |||| | ||||||||  |||||| | ||||  |||||||||| ||  |||||||||||||||||| || |||||||||||||    
T  29290890 tttttaattcattgaataacttatgtatttagtctataatatagatcagatacatcagttgttcaatgaatctaaaaagtgaattttttcttataaa 29290794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 346
Target Start/End: Original strand, 40198405 - 40198541
Alignment:
Q  210 gtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatcta 309  Q
    |||| |||||||||||| | |||| |||||| |||||||| |||| | ||||||| | |||| | | | ||| |||||||||||||  ||||| ||||||    
T  40198405 gtcttatttataagaaacaattgaatttttttattcattgaataatttatgtattcggtctagaatatcgaccagatacatcaattgttcaataaatcta 40198504  T
Q  310 aaaagttaaatttttcttataaataagatcgaaggaa 346  Q
    |||||| || | |||  ||||||||||| || |||||    
T  40198505 aaaagtcaattgtttactataaataagaccggaggaa 40198541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 258 - 349
Target Start/End: Original strand, 9190086 - 9190177
Alignment:
Q  258 atgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    ||||||||| | || ||||| ||| ||||||||  |||| |||||| ||||||||||| || ||| ||||||||||| ||||||||| ||||    
T  9190086 atgtatttggtttaaattcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttataaataggatcgaagggagta 9190177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 16295716 - 16295648
Alignment:
Q  215 atttataagaaatatttgacttttttgattcatt----gcataaatgatgtatttgatctatattctag 279  Q
    ||||||||||||||||||| ||||||||| ||||    |||| ||||||||||||| ||||||||||||    
T  16295716 atttataagaaatatttgatttttttgatccattaattgcatgaatgatgtatttggtctatattctag 16295648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 315
Target Start/End: Original strand, 29290794 - 29290892
Alignment:
Q  216 tttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    ||||||||||| | || ||||||| ||||||||| | || |||||||| ||||||||||| ||||| | |||||| | ||| ||||||||| ||||||||    
T  29290794 tttataagaaaaaattcactttttagattcattgaacaactgatgtatctgatctatattatagactaaatacataagttattcaatgaat-taaaaagt 29290892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 44518051 - 44518170
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||||||||||  ||||||||||| |||||||||  ||| | |||||| |  |||| | | ||||| | |||||||| |||  ||||||||| ||||||    
T  44518051 atttataagaaaactttgactttttagattcattgagtaattaatgtatcttgtctaaaatatagaccaaatacatcatttagacaatgaatcaaaaaag 44518150  T
Q  315 ttaaatttttcttataaata 334  Q
    | ||| ||||||||||||||    
T  44518151 tcaaagttttcttataaata 44518170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 340
Target Start/End: Complemental strand, 47978024 - 47977930
Alignment:
Q  246 attgcataaatgatgtatttgatctatattctagacaagatacatcaatta-atcaatgaatctaaaaagttaaatttttcttataaataagatcg 340  Q
    |||| |||||| || ||| |||| |||||| |||||||||||||| ||||| || ||||||| ||||||||| ||||||| ||||||||| |||||    
T  47978024 attgtataaataatatatctgatttatattttagacaagatacattaattatataaatgaatttaaaaagtt-aattttttttataaataggatcg 47977930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 51723393 - 51723512
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| | |||| ||||| |||||||||  ||| | ||||||||||| || | | ||||| | ||| |||| |||  ||||||||| ||||||    
T  51723393 atttataagaaaaagttgattttttagattcattgagtaattaatgtatttgatatagaatatagactaaatatatcatttatacaatgaatcaaaaaag 51723492  T
Q  315 ttaaatttttcttataaata 334  Q
    ||||||||||| ||| ||||    
T  51723493 ttaaatttttcctattaata 51723512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 315
Target Start/End: Complemental strand, 32711317 - 32711235
Alignment:
Q  233 acttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    ||||||| ||||||||| |||| |||||||| || |||||| | ||| | | |||||||||||| |||||||| |||||||||    
T  32711317 actttttagattcattgaataattgatgtatctggtctataatataggccaaatacatcaattattcaatgaacctaaaaagt 32711235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 23920731 - 23920678
Alignment:
Q  219 ataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctat 272  Q
    |||||||| |||||||||||||||||||||| ||| ||||| |||||| |||||    
T  23920731 ataagaaacatttgacttttttgattcattgtatatatgatatatttggtctat 23920678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 323
Target Start/End: Complemental strand, 54783467 - 54783398
Alignment:
Q  254 aatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttt 323  Q
    ||||||||||  ||||| |||| ||||| | |||||||||||||| ||||||||||||| ||||| ||||    
T  54783467 aatgatgtataagatctttattatagaccacatacatcaattaattaatgaatctaaaatgttaattttt 54783398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 337
Target Start/End: Complemental strand, 8243831 - 8243693
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  ||||| |||| | | || ||||||| ||| ||||| |||| | ||||||||| | || ||||| ||| ||||||||  |||| |    
T  8243831 tactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttagattcttgactagatacatacattatt 8243732  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataaga 337  Q
    ||||| ||||||||||| || | | |||| |||||||||    
T  8243731 caatgtatctaaaaagtcaattgtctcttgtaaataaga 8243693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 312
Target Start/End: Complemental strand, 29222889 - 29222835
Alignment:
Q  258 atgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaa 312  Q
    |||||| |||||| |||| ||||||| |||||||| ||||| |||||||||||||    
T  29222889 atgtatatgatctttattatagacaacatacatcatttaataaatgaatctaaaa 29222835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 331
Target Start/End: Complemental strand, 43901712 - 43901598
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| | || ||||||||| |||||||  |||||||||||  |  |||||||| |  | ||||||||| ||||| || ||||| |||||||||     
T  43901712 ttataagaaacaattaacttttttggttcattgtgtaaatgatgtacctagtctatattttcaataagatacattaattattctatgaacctaaaaagtc 43901613  T
Q  317 aaatttttcttataa 331  Q
    || |||||| |||||    
T  43901612 aactttttcatataa 43901598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 331
Target Start/End: Original strand, 45113751 - 45113865
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| | |||| ||||||| |||||||  ||| |||||||| |  ||||||||    | ||||||||| ||||| || ||||| |||||||||     
T  45113751 ttataagaaacaattgatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatacattaattattctatgaacctaaaaagtc 45113850  T
Q  317 aaatttttcttataa 331  Q
    || ||||||||||||    
T  45113851 aactttttcttataa 45113865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 9197152 - 9197095
Alignment:
Q  277 tagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||| |||||||| |||  ||||||||| ||||||| |||| |||||||||||||    
T  9197152 tagacaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatttcttataaata 9197095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 335
Target Start/End: Original strand, 55139203 - 55139308
Alignment:
Q  230 ttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttat 329  Q
    |||||||||| ||| ||||| |||| | ||||||||| | || ||||| ||| | |||||| ||||| |||||  |||||||||||| | | |||||| |    
T  55139203 ttgactttttagatacattgaataatttatgtatttgttttaaattcttgaccaaatacataaattattcaatatatctaaaaagttgattgtttctttt 55139302  T
Q  330 aaataa 335  Q
    ||||||    
T  55139303 aaataa 55139308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 4182021 - 4181945
Alignment:
Q  254 aatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttata 330  Q
    |||||||||| ||||||||||| ||||| | |||||||| | | | ||| ||||||| |||||||| ||| ||||||    
T  4182021 aatgatgtatatgatctatattatagaccacatacatcattaattgaataaatctaacaagttaaaatttgcttata 4181945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 331
Target Start/End: Original strand, 52215931 - 52216007
Alignment:
Q  255 atgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||||||| |||||| |||| ||||| | |||||||| ||||| | ||||||||||| ||| | |||| |||||||    
T  52215931 atgatgtatatgatctttattatagaccacatacatcatttaatgagtgaatctaaaatgttgatttttgcttataa 52216007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 1e-41; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 215 - 337
Target Start/End: Complemental strand, 30627956 - 30627834
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| ||| ||||||     
T  30627956 atttataagaaacatttgacttttctgattcattgcataaatgatgtatttggtctatattttagacaagatacatcaattactcaataaatataaaaaa 30627857  T
Q  315 ttaaatttttcttataaataaga 337  Q
    | |||||||||||||||||||||    
T  30627856 tcaaatttttcttataaataaga 30627834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 215 - 343
Target Start/End: Original strand, 17265736 - 17265864
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||| || |||||| ||||||     
T  17265736 atttataagaaacatttgacttttttgattcattgcataaatgacgtatttagtctatattctagacaagatacatcaattactcgatgaatttaaaaaa 17265835  T
Q  315 ttaaatttttcttataaataagatcgaag 343  Q
    | |||||||||||||||||| || |||||    
T  17265836 tcaaatttttcttataaatatgaccgaag 17265864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 3065032 - 3064897
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  ||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||| || ||||||||||| |||||      
T  3065032 tactccctccggtcctatttataagaaatattttacttttttgattcattgcataaatggtgtatttggtctatattttatacaagatacattaattata 3064933  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    |||||||||||||||| ||| |||||||||||||||    
T  3064932 caatgaatctaaaaagataattttttcttataaata 3064897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 214 - 333
Target Start/End: Complemental strand, 12450485 - 12450366
Alignment:
Q  214 aatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||| || |||||||||||| |||||||||| |||||    
T  12450485 aatttataagaaatatttgacttttttaattcattgcataaatgatgtatttaatctatattttagataaaatacatcaattattcaatgaatccaaaaa 12450386  T
Q  314 gttaaatttttcttataaat 333  Q
    ||||||  ||||||||||||    
T  12450385 gttaaacatttcttataaat 12450366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 215 - 334
Target Start/End: Complemental strand, 28630886 - 28630767
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| | |||||||||| |||||||||||||||| ||||||||| |||||||| |||||||||||||||||||| |||||||||  ||||||    
T  28630886 atttataagaaacaattgactttttagattcattgcataaattatgtatttggtctatattatagacaagatacatcaattactcaatgaataaaaaaag 28630787  T
Q  315 ttaaatttttcttataaata 334  Q
    | ||||||||||||||||||    
T  28630786 tcaaatttttcttataaata 28630767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 204 - 296
Target Start/End: Complemental strand, 9077730 - 9077638
Alignment:
Q  204 cctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaatta 296  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||    
T  9077730 cctccggtcttatttataagaaatatttgacttttttgattcattgcataaatgatgcatttggtctatattctagacaagatacattaatta 9077638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 216 - 337
Target Start/End: Complemental strand, 2972296 - 2972175
Alignment:
Q  216 tttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    ||||||||||| ||| ||| ||||||||||||||||||||||||||||||  |||||||| |||| |||||||| |||||| ||||| ||||||||||||    
T  2972296 tttataagaaacattagacgtttttgattcattgcataaatgatgtattttgtctatattttagataagatacaccaattactcaataaatctaaaaagt 2972197  T
Q  316 taaatttttcttataaataaga 337  Q
     |||||| ||||||||||||||    
T  2972196 caaatttctcttataaataaga 2972175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 8053005 - 8052869
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatc-aattaa 297  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||||||| | |||| ||||||||  ||| |||||||||||||||||||| || ||     
T  8053005 tacttcctccggtcatatttataagaaatatttgacttttttaattcattgtacaaataatgtatttagtctttattctagacaagatacatcaaaatat 8052906  T
Q  298 tcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    |||||| || |||||||| ||| ||||||||||||||    
T  8052905 tcaatgcatttaaaaagtcaaaattttcttataaata 8052869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 33119919 - 33120036
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| ||||||||| |||||||||||| ||||||| |||||||| |||||||  | ||||||||||||| |||| |||||||||||||||||    
T  33119919 atttataagaaacatttgacttctttgattcattgtataaatgttgtatttggtctatat--ttgacaagatacatcgattattcaatgaatctaaaaag 33120016  T
Q  315 ttaaatttttcttataaata 334  Q
    | ||| ||||||||||||||    
T  33120017 tcaaaattttcttataaata 33120036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 215 - 334
Target Start/End: Original strand, 10283309 - 10283428
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||| |||||||||||||||||||||||| | |||||||||||||||||| |||||| ||||||  |||||||||||| ||||| ||| ||||||     
T  10283309 atttataaaaaatatttgacttttttgattcatggtataaatgatgtatttgatatatattttagacagtatacatcaattactcaataaatttaaaaaa 10283408  T
Q  315 ttaaatttttcttataaata 334  Q
    |||| |||| ||||||||||    
T  10283409 ttaatttttgcttataaata 10283428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 215 - 349
Target Start/End: Original strand, 12999770 - 12999905
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatct-aaaaa 313  Q
    ||||| |||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||| || |  ||||| ||||| ||||||||||| |||||    
T  12999770 atttacaagaaacatttaacttttttgattcattgcataaaagatgtatttgatctatattctataccaagtacattaattactcaatgaatctgaaaaa 12999869  T
Q  314 gttaaatttttcttataaataagatcgaaggaagta 349  Q
    || || |||| |||||||||||||||| ||| ||||    
T  12999870 gtcaacttttacttataaataagatcggagggagta 12999905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 233 - 334
Target Start/End: Original strand, 2230382 - 2230483
Alignment:
Q  233 acttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaa 332  Q
    ||||| ||||||| ||| |||||||||||| ||| ||||||||||||||||||||||| ||||| |||||||||||||||||| ||| ||||||||||||    
T  2230382 actttattgattcgttgaataaatgatgtacttggtctatattctagacaagatacattaattactcaatgaatctaaaaagtcaaagttttcttataaa 2230481  T
Q  333 ta 334  Q
    ||    
T  2230482 ta 2230483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 210 - 342
Target Start/End: Complemental strand, 30895322 - 30895190
Alignment:
Q  210 gtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatcta 309  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||| || |  ||||| ||||   |||||||| ||    
T  30895322 gtcttatttataagaaacatttgacttttttgattcattgcataaatgatatatttggtctatattctataccaagtacattaattgtccaatgaattta 30895223  T
Q  310 aaaagttaaatttttcttataaataagatcgaa 342  Q
    |||| | || ||||||||||||||| |||||||    
T  30895222 aaaattcaactttttcttataaatatgatcgaa 30895190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 315
Target Start/End: Complemental strand, 27909126 - 27909007
Alignment:
Q  197 actacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaatta 296  Q
    |||||| |||| ||||  ||||| |||||| ||||||||||||| |||||||| |||| |||||||||||||||||||| |||||  |||||||||||||    
T  27909126 actactccctctggtcctatttacaagaaacatttgacttttttaattcattgaataattgatgtatttgatctatattttagaccggatacatcaatta 27909027  T
Q  297 atcaa-tgaatctaaaaagt 315  Q
     |||| ||||||||||||||    
T  27909026 ctcaattgaatctaaaaagt 27909007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 215 - 331
Target Start/End: Complemental strand, 28863453 - 28863337
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| |||| | || ||||||| ||||||||||||||||||||| | ||||||||||||||||||||| |||||  ||||||| |||||||     
T  28863453 atttataagaaacatttaaattctttgatttattgcataaatgatgtatttggtttatattctagacaagatacataaattatacaatgaaactaaaaaa 28863354  T
Q  315 ttaaatttttcttataa 331  Q
    | || ||| ||||||||    
T  28863353 tcaattttatcttataa 28863337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 199 - 349
Target Start/End: Complemental strand, 2810227 - 2810078
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  || ||||||||||| || |||||||| |||||||| |||  |||||||||||  |||| |||||||| || ||||||||||| |    
T  2810227 tactccctccggtcctatatataagaaataatttacttttttcattcattgaatagttgatgtatttggactat-ttctagactaggtacatcaattatt 2810129  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
     |||||||||||||| |||| ||||| ||||||||| || |||||| ||||    
T  2810128 gaatgaatctaaaaaattaacttttttttataaataggaccgaagggagta 2810078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 206 - 333
Target Start/End: Original strand, 12450357 - 12450484
Alignment:
Q  206 tccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaa 305  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||| |||| |||||||||| ||||| | | ||||  | |||||||| |||  |||||||    
T  12450357 tccggtctaatttataagaaatgtttaactttttggattcattgaataattgatgtattttatctaaaatatagattaaatacatcatttatgcaatgaa 12450456  T
Q  306 tctaaaaagttaaatttttcttataaat 333  Q
    |  ||||||| |||| ||||||||||||    
T  12450457 ttaaaaaagtcaaatatttcttataaat 12450484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 351
Target Start/End: Original strand, 1836978 - 1837110
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    ||||||||| | || |||||||||||| |||| |||| ||||||||||| ||||| |||||| | || ||||||||||| | ||| |||||||||| |||    
T  1836978 tataagaaacaatttacttttttgattaattgaataattgatgtatttggtctat-ttctaggctaggtacatcaattattgaataaatctaaaaaatta 1837076  T
Q  318 aatttttcttataaataagatcgaaggaagtagt 351  Q
    | ||||||||||||||| | ||| ||| ||||||    
T  1837077 actttttcttataaatagggtcggaggtagtagt 1837110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 360
Target Start/End: Original strand, 8646697 - 8646838
Alignment:
Q  218 tataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtta 317  Q
    ||||||||||| || ||||||||||||||||| |||  ||||| ||||| ||||| |||||    || ||||||||||| | ||| ||||||||||| ||    
T  8646697 tataagaaataatttacttttttgattcattgaatagttgatgcatttggtctat-ttctaagttaggtacatcaattattaaataaatctaaaaagata 8646795  T
Q  318 aatttttcttataaataagatcgaaggaagtagtagataaatt 360  Q
    | ||||||||||||||| ||||| ||| |||| || |||||||    
T  8646796 actttttcttataaataggatcggagggagtattaaataaatt 8646838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 337
Target Start/End: Complemental strand, 7649941 - 7649810
Alignment:
Q  208 cggtctaatttataagaaatatttgacttttttga--ttcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaa 305  Q
    |||||| |||| ||||||||| || | |||||| |  ||||||| |||| |||| |||||| | |||||| ||||| | |||||||||||| ||||||||    
T  7649941 cggtcttatttctaagaaataattaattttttttaaattcattgaataattgatttatttggtatatattttagaccaaatacatcaattattcaatgaa 7649842  T
Q  306 tctaaaaagttaaatttttcttataaataaga 337  Q
    ||||||||| ||| | ||| ||||||||||||    
T  7649841 tctaaaaagataattatttattataaataaga 7649810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 334
Target Start/End: Original strand, 28630759 - 28630887
Alignment:
Q  206 tccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaa 305  Q
    |||||||  |||||||||||| ||||||||||||| ||||||||  ||| |||||||| |  |||||| | ||||| | |||||| | |||  |||||||    
T  28630759 tccggtcctatttataagaaaaatttgactttttttattcattgagtaattgatgtatcttgtctataatatagaccaaatacataatttatgcaatgaa 28630858  T
Q  306 tctaaaaagttaaatttttcttataaata 334  Q
    |||||||||| || | |||||||||||||    
T  28630859 tctaaaaagtcaattgtttcttataaata 28630887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 334
Target Start/End: Original strand, 1158273 - 1158379
Alignment:
Q  228 atttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttctt 327  Q
    |||| ||||||| ||||||||| |||| | ||||||| | |||||||||||||| | |||||||||||| |||||| || |||||||| || | ||||||    
T  1158273 atttaactttttagattcattgaataattaatgtattcggtctatattctagaccaaatacatcaattattcaatgtatttaaaaagtcaattatttctt 1158372  T
Q  328 ataaata 334  Q
     ||||||    
T  1158373 gtaaata 1158379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 215 - 320
Target Start/End: Complemental strand, 1158378 - 1158273
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||| |||||||| ||||||||||  || ||||| |||| ||||||||||| |||| | | |||||   |||||| ||||| |||||||||||||||||    
T  1158378 atttacaagaaataattgactttttaaatacattgaataattgatgtatttggtctagaatatagaccgaatacattaattattcaatgaatctaaaaag 1158279  T
Q  315 ttaaat 320  Q
    ||||||    
T  1158278 ttaaat 1158273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 315
Target Start/End: Original strand, 24985975 - 24986047
Alignment:
Q  243 ttcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    ||||||| |||| |||||||||||||||||||| ||||| | ||||||||||||  ||||||| |||||||||    
T  24985975 ttcattgaataactgatgtatttgatctatattatagaccatatacatcaattatccaatgaacctaaaaagt 24986047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 330
Target Start/End: Original strand, 29168476 - 29168611
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcatt----gcataaatgatgtatttgatctatattctagacaagatacatcaat 294  Q
    |||| |||||||||| ||||||||| ||  ||||||||||| ||||||||    | ||||||||||||| || |||||||| || || | |||||| | |    
T  29168476 tactccctccggtctcatttataagcaaattttgactttttagattcattcgatgaataaatgatgtatgtggtctatattatataccacatacataatt 29168575  T
Q  295 taatcaatgaatctaaaaagttaaatttttcttata 330  Q
    || ||||||||||||||| || ||| ||| ||||||    
T  29168576 tattcaatgaatctaaaaggtgaaaatttgcttata 29168611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 2937095 - 2937175
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaatta 296  Q
    |||||||||||| |||| ||||||| ||||||||||||||||| |||||||| | || ||| ||||||||||| || |||||    
T  2937095 atttataagaaacatttaactttttagattcattgcataaatg-tgtatttggtttacattttagacaagatatattaatta 2937175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 315
Target Start/End: Original strand, 5483876 - 5483976
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||| || ||||||||||||||||  ||| |||  |||| ||||||||||  |||||||| ||||| | |||||| ||||| |||| ||||||||||||    
T  5483876 atttacaataaatatttgactttttaaatttattaaataattgatgtattttgtctatattttagactaaatacattaattattcaacgaatctaaaaag 5483975  T
Q  315 t 315  Q
    |    
T  5483976 t 5483976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 217 - 349
Target Start/End: Complemental strand, 30438874 - 30438742
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||||| || ||||||||| || |||| |||| |||||||| |  ||||||||    | || |||||| ||||| || |||||||||||||||     
T  30438874 ttataagaaataattaacttttttggtttattgtataagtgatgtatctagtctatatttacaataaaatacattaattattctatgaatctaaaaagtc 30438775  T
Q  317 aaatttttcttataaataagatcgaaggaagta 349  Q
    || ||||||||||||  | ||||||||| ||||    
T  30438774 aactttttcttataataaggatcgaagggagta 30438742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 249
Target Start/End: Complemental strand, 25538090 - 25538047
Alignment:
Q  206 tccggtctaatttataagaaatatttgacttttttgattcattg 249  Q
    |||||||| ||||||||||||||||| |||||||||||||||||    
T  25538090 tccggtcttatttataagaaatatttaacttttttgattcattg 25538047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 332
Target Start/End: Original strand, 2972170 - 2972296
Alignment:
Q  206 tccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaa 305  Q
    |||||||| |||||||||| | |||||||||||| |||| ||||  ||| || ||||| | ||||| | | ||||||| |||||||| |||  |||||||    
T  2972170 tccggtcttatttataagagaaatttgactttttagatttattgagtaattggtgtatcttatctaaaatatagacaaaatacatcatttatgcaatgaa 2972269  T
Q  306 tctaaaaagttaaatttttcttataaa 332  Q
    || |||| ||  ||| |||||||||||    
T  2972270 tcaaaaacgtctaatgtttcttataaa 2972296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 21162415 - 21162473
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctata 273  Q
    |||||||||||| |||| |||||||| ||||||||||||||| |||||| || ||||||    
T  21162415 atttataagaaacatttaacttttttaattcattgcataaataatgtatatggtctata 21162473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 3046738 - 3046652
Alignment:
Q  223 gaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    |||| ||||||||||||| ||||||| | |||||||||||| || |||||||| ||||| ||    |||||||| ||||||||| ||||||    
T  3046738 gaaacatttgacttttttaattcattacttaaatgatgtatgtggtctatattgtagaccag----atcaattactcaatgaatttaaaaa 3046652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 7649807 - 7649912
Alignment:
Q  208 cggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatc 307  Q
    |||||| |||||||| ||||| ||  |||||| ||||||||| |||| ||||||||||| |||| | | || || | ||| |||||||| |||||||||     
T  7649807 cggtcttatttataataaataattatctttttagattcattgaataattgatgtatttggtctaaaatatataccaaataaatcaattattcaatgaatt 7649906  T
Q  308 taaaaa 313  Q
    ||||||    
T  7649907 taaaaa 7649912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 15836647 - 15836574
Alignment:
Q  236 tttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatcta 309  Q
    |||| ||||||||  ||||||||||||| ||| ||||||| ||||||| |||||||| ||| | ||||||||||    
T  15836647 ttttagattcattcaataaatgatgtatgtgacctatattgtagacaacatacatcatttattgaatgaatcta 15836574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 16121003 - 16121092
Alignment:
Q  242 attcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    |||||||  |||||||||||| ||| |||||||| | ||| | |||||||| ||| | ||||||||||||||||| | |||| |||||||    
T  16121003 attcattcaataaatgatgtacttggtctatattattgaccaaatacatcatttatttaatgaatctaaaaagttgatttttgcttataa 16121092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 345
Target Start/End: Original strand, 17705930 - 17706007
Alignment:
Q  268 tctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataagatcgaagga 345  Q
    |||||||| || ||||||||||||||| |  |||| |||  ||||||| || ||||||||||||||||||||| ||||    
T  17705930 tctatattttaaacaagatacatcaatcacgcaatcaattcaaaaagtcaattttttcttataaataagatcggagga 17706007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 334
Target Start/End: Original strand, 30627828 - 30627957
Alignment:
Q  205 ctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatga 304  Q
    ||||||||| |||||||||||| |||||| |||||  ||| ||||  ||| |||||||| |  |||| | | ||||| | |||||||| |||  ||||||    
T  30627828 ctccggtcttatttataagaaaaatttgattttttatatttattgagtaattgatgtatcttgtctaaaatatagaccaaatacatcatttatgcaatga 30627927  T
Q  305 atctaaaaagttaaatttttcttataaata 334  Q
    |||  |||||| |||| |||||||||||||    
T  30627928 atcagaaaagtcaaatgtttcttataaata 30627957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 2937129 - 2937089
Alignment:
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatc 339  Q
    |||||||||||||||||||||| ||||||||||||| ||||    
T  2937129 caatgaatctaaaaagttaaatgtttcttataaataggatc 2937089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 312
Target Start/End: Original strand, 33053797 - 33053873
Alignment:
Q  236 tttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaa 312  Q
    |||| ||||||||  ||||||||||||| |||||| |||| ||||||| |||||||| ||| | |||| ||||||||    
T  33053797 ttttagattcattcaataaatgatgtatgtgatctttattgtagacaacatacatcatttattgaatgtatctaaaa 33053873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 199 - 318
Target Start/End: Complemental strand, 6047945 - 6047826
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  ||||| |||| ||| || ||||||| ||| ||||  |||| | ||||||||||| ||  |||| ||| ||||||||  |||| |    
T  6047945 tactccctccggtcatatttacaagagataatttactttttagatacattaaataatttatgtatttgatttaggttcttgactagatacatacattatt 6047846  T
Q  299 caatgaatctaaaaagttaa 318  Q
    ||||| ||||||||||||||    
T  6047845 caatgtatctaaaaagttaa 6047826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 339
Target Start/End: Original strand, 7257354 - 7257469
Alignment:
Q  224 aaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttt 323  Q
    ||||||||||||||||| ||||||||||||||| |  |||||    |||||| || |  | |||||| ||||| ||||||||| |||||||| || |||     
T  7257354 aaatatttgactttttttattcattgcataaataacttatttagcttatattatatatcaaatacattaattattcaatgaatttaaaaagtcaatttta 7257453  T
Q  324 tcttataaataagatc 339  Q
    | ||||||||| ||||    
T  7257454 ttttataaataggatc 7257469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 331
Target Start/End: Original strand, 13281566 - 13281661
Alignment:
Q  236 tttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    |||| ||||||||  || |||||||||| |||||| | || ||| | | |||||||| |||||||||||||||||||  || |||||| |||||||    
T  13281566 ttttagattcattcaattaatgatgtatatgatctttcttatagtccacatacatcatttaatcaatgaatctaaaatattgaattttacttataa 13281661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 331
Target Start/End: Original strand, 12605627 - 12605741
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| | |||| |||||| ||||||| | ||| ||||||||||  ||||||||    | ||||||||| ||||| || ||||| |||||| ||     
T  12605627 ttataagaaacaattgattttttttattcattacgtaagtgatgtatttagtctatatttacaataagatacattaattattccatgaacctaaaatgtc 12605726  T
Q  317 aaatttttcttataa 331  Q
    || ||||||||||||    
T  12605727 aactttttcttataa 12605741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 331
Target Start/End: Complemental strand, 16121076 - 16120978
Alignment:
Q  233 acttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataa 331  Q
    ||||||| ||||||||  |||||||||||||||| || ||| | ||||| |  ||||||| ||| | ||||||| ||||||| ||| |||| |||||||    
T  16121076 actttttagattcattaaataaatgatgtatttggtcaataatatagaccaagtacatcatttattgaatgaatttaaaaagataacttttacttataa 16120978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 25538047 - 25538085
Alignment:
Q  299 caatgaatctaaaaagttaaatttttcttataaataaga 337  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  25538047 caatgaatcaaaaaagttaaatatttcttataaataaga 25538085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 331
Target Start/End: Original strand, 28605587 - 28605701
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| | || ||||||||| |||||||  ||| |||||||||| | |||||||    | ||||||||| ||||| || |||||||||||| ||     
T  28605587 ttataagaaacaattaacttttttggttcattgtgtaagtgatgtatttaaactatatttacaataagatacattaattattctatgaatctaaaaggtc 28605686  T
Q  317 aaatttttcttataa 331  Q
    |  ||||||||||||    
T  28605687 agctttttcttataa 28605701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 334
Target Start/End: Complemental strand, 5483988 - 5483875
Alignment:
Q  221 aagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaat 320  Q
    |||||| | |||||||||| ||||| ||| |||| | ||||||||  |||| | | ||||||| |||||||||||| | ||| ||| |||||||| ||||    
T  5483988 aagaaacaattgactttttagattcgttgaataattaatgtatttagtctaaaatatagacaaaatacatcaattatttaataaatttaaaaagtcaaat 5483889  T
Q  321 ttttcttataaata 334  Q
     ||| || ||||||    
T  5483888 atttattgtaaata 5483875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 7158303 - 7158364
Alignment:
Q  251 ataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaa 312  Q
    ||||||||||||| || ||| |||| ||||||| |||||||| ||| | |||||||||||||    
T  7158303 ataaatgatgtatgtggtctttattgtagacaatatacatcatttattgaatgaatctaaaa 7158364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 17265854 - 17265729
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    |||||||||||| |||||| |||||  |||||| |  ||| |||||||| |  |||| | | ||||| | |||| ||| |||  ||||||||| ||||||    
T  17265854 atttataagaaaaatttgattttttaaattcatcgagtaattgatgtatcttgtctagaatatagactaaatacgtcatttatgcaatgaatcaaaaaag 17265755  T
Q  315 ttaaatttttcttataaataagatcg 340  Q
    | |||| ||||||||||||| |||||    
T  17265754 tcaaatgtttcttataaataggatcg 17265729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 334
Target Start/End: Complemental strand, 6045771 - 6045695
Alignment:
Q  258 atgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||||| || ||||| ||| ||||||||  |||| |||||| |||||||| || || ||| |||||||||||    
T  6045771 atgtatttgatttagattcttgactagatacatagattattcaatgtatctaaaaggtcaactttctcttataaata 6045695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 349
Target Start/End: Original strand, 10145232 - 10145364
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||||| |||| |||||||||||||   |||| |||||||| |  ||||||||    | ||||||||| ||||| |  ||||| |||||||||     
T  10145232 ttataagaaataattgatttttttgattcatcatataagtgatgtatctagtctatatttacaataagatacattaattattttatgaacctaaaaagtc 10145331  T
Q  317 aaatttttcttataaataagatcgaaggaagta 349  Q
    || ||||| ||||||  |||| |||||| ||||    
T  10145332 aatttttttttataataaagaccgaagggagta 10145364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 33120051 - 33119987
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtat 263  Q
    |||||||||||||   ||||||||||||  ||||||||||| ||||||||| ||||  |||||||    
T  33120051 tacttcctccggttctatttataagaaaattttgactttttagattcattgaataatcgatgtat 33119987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 208 - 336
Target Start/End: Complemental strand, 16669 - 16541
Alignment:
Q  208 cggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatc 307  Q
    |||||| ||||||||||||  ||||||||||||||||||||| |||||| ||||||||| |||||||||||| |||||| ||||||||| |||||||||     
T  16669 cggtcttatttataagaaacgtttgacttttttgattcattgtataaataatgtatttggtctatattctagtcaagatgcatcaattactcaatgaatt 16570  T
Q  308 taaaaagttaaatttttcttataaataag 336  Q
     ||||||||||||||||||||||||||||    
T  16569 aaaaaagttaaatttttcttataaataag 16541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 199 - 337
Target Start/End: Original strand, 1532 - 1669
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    ||||||||||||||  |||||||  ||| |||||||||||||||||| |||||||||||||| |||||||||||| ||||||| | |||||||||||| |    
T  1532 tacttcctccggtcctatttatataaaacatttgacttttttgattcgttgcataaatgatgcatttgatctatactctagacta-atacatcaattatt 1630  T
Q  299 caatgaatctaaaaagttaaatttttcttataaataaga 337  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  1631 caatgaatctaaaaaattaattttttcttataaataaga 1669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 1681 - 1616
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatt 264  Q
    |||| |||||||||| |||||||||||| | || | ||||| ||||||||| |||| |||||||||    
T  1681 tactccctccggtcttatttataagaaaaaattaattttttagattcattgaataattgatgtatt 1616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 209 - 330
Target Start/End: Original strand, 28096 - 28219
Alignment:
Q  209 ggtctaatttataagaaatatttgacttttttg--attcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaat 306  Q
    ||||| ||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||| |||    
T  28096 ggtcttatttataagaaatatttaacttttttgtgattcattgcataaatgatgtatttgatctatattttagacaagatatatcaattattcaataaat 28195  T
Q  307 ctaaaaagttaaatttttcttata 330  Q
     | |||||| ||||||||||||||    
T  28196 tttaaaagtcaaatttttcttata 28219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 334
Target Start/End: Original strand, 29241 - 29378
Alignment:
Q  197 actacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaatta 296  Q
    |||||| |||||||||  ||||| |||||| | || ||||||| ||| ||||  |||| | ||||||||| | ||  |||| ||| ||||||||  ||||    
T  29241 actactccctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacatta 29340  T
Q  297 atcaatgaatctaaaaagttaaatttttcttataaata 334  Q
     |||||| ||||||||||| || ||| |||| ||||||    
T  29341 ttcaatgtatctaaaaagtcaactttctcttgtaaata 29378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 228 - 334
Target Start/End: Original strand, 16679 - 16782
Alignment:
Q  228 atttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttctt 327  Q
    ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||    | ||||||||||    
T  16679 atttgacttttttgattcattgcataaaatatgtatttggtctatattctagacaagatacatcaattactcaatgaatttaaa---gtcaatttttctt 16775  T
Q  328 ataaata 334  Q
    |||||||    
T  16776 ataaata 16782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 1556 - 1489
Alignment:
Q  228 atttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaatta 296  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1556 atttgacttttttgattcat-gcataaatgatgtatttgatctatattctagacaagatatatcaatta 1489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 156767 - 156902
Alignment:
Q  199 tacttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaat 298  Q
    |||| |||||||||  |||||||||||| |||| |||||||| |||||||||||||| ||| |||||| ||||||||||| || |  ||||| ||||| |    
T  156767 tactccctccggtcctatttataagaaacatttaacttttttaattcattgcataaacgatatatttggtctatattctataccaagtacattaattact 156866  T
Q  299 caatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||| ||||||| |  | |||||||||||||||    
T  156867 caatgaaactaaaaaatctattttttcttataaata 156902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 334
Target Start/End: Complemental strand, 40270 - 40159
Alignment:
Q  224 aaatatttgacttttttgattcattgcataaa-tgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaattt 322  Q
    |||||||||| |||||| ||||||| |||||| ||||||||||| |||||||| || |  ||||||||||||||   |||||||||||| |||||| |||    
T  40270 aaatatttgatttttttaattcattccataaaatgatgtatttggtctatattttatatcagatacatcaattacataatgaatctaaagagttaatttt 40171  T
Q  323 ttcttataaata 334  Q
    | ||||||||||    
T  40170 tccttataaata 40159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 3802 - 3734
Alignment:
Q  269 ctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaataaga 337  Q
    ||||||||||||||| |||||||||||| ||||| ||| |||||||| |||||||||||||| ||||||    
T  3802 ctatattctagacaaaatacatcaattactcaataaatgtaaaaagtcaaatttttcttatatataaga 3734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 5341 - 5288
Alignment:
Q  202 ttcctccggtctaatttataagaaatatttgacttttttgattcattgcataaa 255  Q
    |||||||||||  | |||||||||| ||||||||||||||||| ||||||||||    
T  5341 ttcctccggtcctacttataagaaacatttgacttttttgatttattgcataaa 5288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 235 - 334
Target Start/End: Complemental strand, 16619 - 16521
Alignment:
Q  235 ttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttataaata 334  Q
    ||||||||||||||| |||  ||||||||||| ||||| |||||| | || ||||||||||| | |||||||||||||| |||| |||||||| ||||||    
T  16619 ttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaaattaactttttcttgtaaata 16521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 2609 - 2539
Alignment:
Q  243 ttcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaa 313  Q
    ||||||||||||| |||||||||||||||||||||| |  | |||||| ||||| ||||||||||||||||    
T  2609 ttcattgcataaacgatgtatttgatctatattctatatcaaatacattaattactcaatgaatctaaaaa 2539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 311
Target Start/End: Original strand, 5287 - 5382
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaa 311  Q
    |||||||||||| ||||||||||||| ||| ||||||||||| ||||||||| ||||||||||| | |   ||||| ||||| ||||| ||||||||    
T  5287 atttataagaaacatttgactttttt-attgattgcataaattatgtatttggtctatattctatatatagtacattaattactcaataaatctaaa 5382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 349
Target Start/End: Original strand, 71864 - 71999
Alignment:
Q  215 atttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaag 314  Q
    ||||||||||||  ||| | ||||||||||||||| |||||| ||||||||  |||||||| || |||| |||||| |||||  |||||||| ||| ||     
T  71864 atttataagaaaattttaatttttttgattcattgtataaattatgtatttagtctatattttatacaaaatacattaattacacaatgaatttaataaa 71963  T
Q  315 ttaaatttttctt-ataaataagatcgaaggaagta 349  Q
    | || ||||| || ||||||| ||||| ||||||||    
T  71964 tcaacttttttttaataaataggatcggaggaagta 71999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 71898 - 71848
Alignment:
Q  299 caatgaatctaaaaagttaaatttttcttataaataagatcgaaggaagta 349  Q
    ||||||||| ||||| ||||| |||||||||||||| ||||||||| ||||    
T  71898 caatgaatcaaaaaaattaaaattttcttataaataggatcgaagggagta 71848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 252 - 316
Target Start/End: Complemental strand, 36946 - 36882
Alignment:
Q  252 taaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    ||||||||||||||||||||| || | ||| | |||||||| ||||| |||||||||||||||||    
T  36946 taaatgatgtatttgatctatgttattgaccaaatacatcatttaatgaatgaatctaaaaagtt 36882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 217 - 329
Target Start/End: Original strand, 112840 - 112952
Alignment:
Q  217 ttataagaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtt 316  Q
    |||||||||| | ||||| |||| | ||||||| | ||||||||||| | |||||||||    ||||||||||| ||||| ||||| ||||||||||||     
T  112840 ttataagaaacaattgacgttttaggttcattgtacaaatgatgtatctaatctatatttataacaagatacattaattattcaataaatctaaaaagtc 112939  T
Q  317 aaatttttcttat 329  Q
    || | ||||||||    
T  112940 aattgtttcttat 112952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 337
Target Start/End: Complemental strand, 423366 - 423259
Alignment:
Q  230 ttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaatttttcttat 329  Q
    |||||||||| ||||||||| |||| ||||||||| | |||||||||||  | | || ||||||||| ||||| |||||||||  | || | ||||||||    
T  423366 ttgactttttagattcattgaataattgatgtattcggtctatattctaatccatatgcatcaattattcaataaatctaaaatatgaattgtttcttat 423267  T
Q  330 aaataaga 337  Q
    | ||||||    
T  423266 atataaga 423259  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 315
Target Start/End: Original strand, 135830 - 135887
Alignment:
Q  258 atgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagt 315  Q
    ||||||||||| |||||| ||||| | |||||| | ||||||||||| ||||||||||    
T  135830 atgtatttgatttatattatagactaaatacataagttaatcaatgagtctaaaaagt 135887  T

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Target: scaffold1786 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 600 - 532
Alignment:
Q  254 aatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagttaaattt 322  Q
    |||||||||| ||||| ||||| || || | |||||||||| | | |||||||||||||||| ||||||    
T  600 aatgatgtatgtgatcaatattataaaccacatacatcaataattaaatgaatctaaaaagtaaaattt 532  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 146076 - 146000
Alignment:
Q  236 tttttgattcattgcataaatgatgtatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaa 312  Q
    |||| ||||||||  || |||||||||| || ||| |||| ||||| | |||||||| ||||| |||||||||||||    
T  146076 ttttagattcattcaattaatgatgtatatggtctttattttagaccacatacatcatttaatgaatgaatctaaaa 146000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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