View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6175_low_4 (Length: 232)
Name: NF6175_low_4
Description: NF6175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6175_low_4 |
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Alignment Details
Target: chr6 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 215
Target Start/End: Complemental strand, 963602 - 963398
Alignment:
| Q |
11 |
atcatcactttataagtccatactataaatacatcatttaattagttaaaaagaccatttcctaacttcaacttagtgttagccactcattatcttatca |
110 |
Q |
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| T |
963602 |
atcatcactttataagtccatactataaatacatcatttaattagttaaaaagaccatttcctaacttcaacttagtgttagccactcattatcttatca |
963503 |
T |
|
| Q |
111 |
aataaatatgtgcttctcacttgattttcttacctataagctaagcaattttcagtctagacatcaagtaaagttacataaaagcattaccatttttgga |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
963502 |
aataaatatgtgcttctcacttgattttcttacctataagctaagcaattttcagtctagacatcaagtaaagttacataaaagcattaccatttttgga |
963403 |
T |
|
| Q |
211 |
aatcc |
215 |
Q |
| |
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||||| |
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| T |
963402 |
aatcc |
963398 |
T |
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