View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6177_high_12 (Length: 239)

Name: NF6177_high_12
Description: NF6177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6177_high_12
NF6177_high_12
[»] chr3 (6 HSPs)
chr3 (15-223)||(47986653-47986861)
chr3 (15-223)||(47995940-47996148)
chr3 (15-223)||(48005227-48005435)
chr3 (15-223)||(48014512-48014720)
chr3 (58-124)||(6905806-6905872)
chr3 (64-124)||(32411083-32411143)
[»] chr6 (27 HSPs)
chr6 (59-160)||(5157472-5157573)
chr6 (56-146)||(5426043-5426133)
chr6 (61-160)||(5354458-5354557)
chr6 (56-146)||(5066552-5066642)
chr6 (56-146)||(5073766-5073856)
chr6 (55-132)||(5128289-5128366)
chr6 (61-131)||(5102487-5102557)
chr6 (65-137)||(5096850-5096922)
chr6 (64-146)||(5181785-5181867)
chr6 (56-124)||(5176872-5176940)
chr6 (56-124)||(5243793-5243861)
chr6 (56-124)||(5278699-5278767)
chr6 (56-132)||(5370704-5370780)
chr6 (56-160)||(5397083-5397187)
chr6 (55-124)||(5344993-5345062)
chr6 (55-124)||(5690039-5690108)
chr6 (56-132)||(5383459-5383535)
chr6 (56-146)||(5350527-5350611)
chr6 (56-131)||(5434168-5434243)
chr6 (56-129)||(5447720-5447793)
chr6 (159-222)||(5397215-5397278)
chr6 (56-146)||(5284247-5284337)
chr6 (58-113)||(5179676-5179731)
chr6 (58-113)||(5281435-5281490)
chr6 (97-126)||(2938282-2938311)
chr6 (103-132)||(5137538-5137567)
chr6 (163-223)||(5073660-5073720)
[»] chr5 (5 HSPs)
chr5 (56-129)||(8877742-8877815)
chr5 (67-122)||(20812421-20812476)
chr5 (64-122)||(12599054-12599112)
chr5 (64-122)||(20838773-20838831)
chr5 (66-124)||(30417963-30418021)
[»] chr7 (1 HSPs)
chr7 (56-126)||(36213707-36213777)
[»] scaffold0294 (1 HSPs)
scaffold0294 (56-137)||(8767-8848)
[»] chr4 (18 HSPs)
chr4 (64-126)||(4344787-4344849)
chr4 (55-121)||(4320502-4320568)
chr4 (64-126)||(4361218-4361280)
chr4 (55-132)||(4123811-4123888)
chr4 (64-129)||(4335486-4335551)
chr4 (68-129)||(6498401-6498462)
chr4 (58-125)||(6532111-6532178)
chr4 (61-129)||(6545323-6545391)
chr4 (61-129)||(6588071-6588139)
chr4 (61-129)||(6675841-6675909)
chr4 (55-128)||(6758856-6758929)
chr4 (61-129)||(6728544-6728612)
chr4 (61-128)||(6753098-6753165)
chr4 (58-128)||(6822826-6822896)
chr4 (59-129)||(6837410-6837480)
chr4 (76-128)||(4133290-4133342)
chr4 (61-129)||(6651205-6651273)
chr4 (61-129)||(6815608-6815676)
[»] chr8 (8 HSPs)
chr8 (69-122)||(3262629-3262682)
chr8 (68-124)||(3407323-3407379)
chr8 (64-121)||(3314999-3315056)
chr8 (64-123)||(3286516-3286575)
chr8 (64-122)||(31175988-31176046)
chr8 (64-121)||(3325003-3325060)
chr8 (64-124)||(3391536-3391596)
chr8 (64-124)||(3364310-3364370)
[»] scaffold0468 (1 HSPs)
scaffold0468 (58-124)||(6146-6212)
[»] scaffold0373 (1 HSPs)
scaffold0373 (59-129)||(9826-9896)
[»] scaffold0813 (1 HSPs)
scaffold0813 (61-129)||(4701-4769)
[»] chr2 (1 HSPs)
chr2 (56-124)||(22584094-22584162)


Alignment Details
Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 47986861 - 47986653
Alignment:
Q  15 actgcgataacaagagtgcctttatcagtagtgaggtcacctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47986861 actgcgataacaagagtgcctttatcagtagtgaggtcacctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatg 47986762  T
Q  115 tcaccaacaaataatctcacatcaccatttcatgcacctgctgccaagtagtagttcccatgaactatcctctttttctaaccaccttcaaaggcttcga 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  47986761 tcaccaacaaataatctcacatcaccatttcatgcacctgctgccaagtagtagttcccatgaactatcctccttttctaaccaccttcaaaggcttcga 47986662  T
Q  215 agtctttgg 223  Q
    |||||||||    
T  47986661 agtctttgg 47986653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 47996148 - 47995940
Alignment:
Q  15 actgcgataacaagagtgcctttatcagtagtgaggtcacctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47996148 actgcgataacaagagtgcctttatcagtagtgaggtcacctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatg 47996049  T
Q  115 tcaccaacaaataatctcacatcaccatttcatgcacctgctgccaagtagtagttcccatgaactatcctctttttctaaccaccttcaaaggcttcga 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  47996048 tcaccaacaaataatctcacatcaccatttcatgcacctgctgccaagtagtagttcccatgaactatcctccttttctaaccaccttcaaaggcttcga 47995949  T
Q  215 agtctttgg 223  Q
    |||||||||    
T  47995948 agtctttgg 47995940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 48005435 - 48005227
Alignment:
Q  15 actgcgataacaagagtgcctttatcagtagtgaggtcacctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48005435 actgcgataacaagagtgcctttatcagtagtgaggtcacctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatg 48005336  T
Q  115 tcaccaacaaataatctcacatcaccatttcatgcacctgctgccaagtagtagttcccatgaactatcctctttttctaaccaccttcaaaggcttcga 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  48005335 tcaccaacaaataatctcacatcaccatttcatgcacctgctgccaagtagtagttcccatgaactatcctccttttctaaccaccttcaaaggcttcga 48005236  T
Q  215 agtctttgg 223  Q
    |||||||||    
T  48005235 agtctttgg 48005227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 48014720 - 48014512
Alignment:
Q  15 actgcgataacaagagtgcctttatcagtagtgaggtcacctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48014720 actgcgataacaagagtgcctttatcagtagtgaggtcacctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatg 48014621  T
Q  115 tcaccaacaaataatctcacatcaccatttcatgcacctgctgccaagtagtagttcccatgaactatcctctttttctaaccaccttcaaaggcttcga 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  48014620 tcaccaacaaataatctcacatcaccatttcatgcacctgctgccaagtagtagttcccatgaactatcctccttttctaaccaccttcaaaggcttcga 48014521  T
Q  215 agtctttgg 223  Q
    |||||||||    
T  48014520 agtctttgg 48014512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 6905872 - 6905806
Alignment:
Q  58 tgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaa 124  Q
    ||||| ||||||||||| ||||||||| | ||||| ||| |||||||||||||||||||||||||||    
T  6905872 tgcggatatgaaggattatcacgtgatatttttccttctctcatttggtcttggatgtcaccaacaa 6905806  T

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Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 32411143 - 32411083
Alignment:
Q  64 tatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaa 124  Q
    ||||||||||| |||| ||| || ||||| ||| |||||||||||| ||||||||||||||    
T  32411143 tatgaaggattatcacatgaagtatttccctctctcatttggtcttagatgtcaccaacaa 32411083  T

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Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 5157573 - 5157472
Alignment:
Q  59 gcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctcacatcaccatttcatgcacctgctgc 158  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||  || |||||||    
T  5157573 gcggctatgaaggattttctcgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctcccatctccatttcaaacatctgctgc 5157474  T
Q  159 ca 160  Q
    ||    
T  5157473 ca 5157472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 56 - 146
Target Start/End: Original strand, 5426043 - 5426133
Alignment:
Q  56 tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctcacatcaccatttca 146  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  5426043 tgtgcggctatgaaggattttcacgtgatgtgtttccagcgatcatttggtcttggatgtcaccaacaaataatctcccatccccatttca 5426133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 61 - 160
Target Start/End: Complemental strand, 5354557 - 5354458
Alignment:
Q  61 ggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctcacatcaccatttcatgcacctgctgcca 160  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||  || |||||||||    
T  5354557 ggctatgaaggattctcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctccgatctccatttcaaacatctgctgcca 5354458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 56 - 146
Target Start/End: Complemental strand, 5066642 - 5066552
Alignment:
Q  56 tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctcacatcaccatttca 146  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| | ||||||    
T  5066642 tgtgcggctatgaaggattctcgcgtgatgtgtttccatctatcattttgtcttggatgtcaccaacaaataatctcccatccctatttca 5066552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 56 - 146
Target Start/End: Complemental strand, 5073856 - 5073766
Alignment:
Q  56 tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctcacatcaccatttca 146  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| || ||||||||    
T  5073856 tgtgcggctatgaaggattctcacgtgatgtgttcccatcgatcatttggtcttggatgtcaccgacaaataatctcacttccccatttca 5073766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 5128366 - 5128289
Alignment:
Q  55 ctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctc 132  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  5128366 ctgtgcggccatgaaggattttcaagtgatgtgtttccatctatcatctggtcttggatgtcaccaacaaatgatctc 5128289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 61 - 131
Target Start/End: Complemental strand, 5102557 - 5102487
Alignment:
Q  61 ggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatct 131  Q
    |||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5102557 ggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttggatgtcaccaacaaataatct 5102487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 5096850 - 5096922
Alignment:
Q  65 atgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctcacatc 137  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||| ||||    
T  5096850 atgaaggattttcacgtgatgtgtttccgtctatcatctggtcttggttgtcaccaacaaataatctctcatc 5096922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 146
Target Start/End: Complemental strand, 5181867 - 5181785
Alignment:
Q  64 tatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctcacatcaccatttca 146  Q
    ||||||||||| |||| ||||||||||||| | ||||||||||||||||||||||| |||||||||||| |||| ||||||||    
T  5181867 tatgaaggattctcacatgatgtgtttccagcgatcatttggtcttggatgtcaccgacaaataatctcccatccccatttca 5181785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 5176872 - 5176940
Alignment:
Q  56 tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaa 124  Q
    ||||||||||||||||||| ||||||||| | |||||||| ||||||||||||||||||||||||||||    
T  5176872 tgtgcggctatgaaggattctcacgtgatatatttccatcaatcatttggtcttggatgtcaccaacaa 5176940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 5243861 - 5243793
Alignment:
Q  56 tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaa 124  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  5243861 tgtgtggctatgaaggattttcacgcgatgtatttccatctatcatctggtcttggatgtcaccaacaa 5243793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 5278699 - 5278767
Alignment:
Q  56 tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaa 124  Q
    ||||||||||||||||||| ||||||||| | |||||||| ||||||||||||||||||||||||||||    
T  5278699 tgtgcggctatgaaggattctcacgtgatatatttccatcaatcatttggtcttggatgtcaccaacaa 5278767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 5370704 - 5370780
Alignment:
Q  56 tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctc 132  Q
    |||| ||| ||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  5370704 tgtgtggccatgtaggattttcacatgatgtttttccatctatcatttggtcttggatgtcaccaacaaattatctc 5370780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 160
Target Start/End: Original strand, 5397083 - 5397187
Alignment:
Q  56 tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctcacatcaccatttcatgcacctgc 155  Q
    ||||||| ||||||||||||||| |||| ||||||||| ||||||||| |||||||||||||||||||| ||| ||| |||  ||||||||  || ||||    
T  5397083 tgtgcggatatgaaggattttcatgtgaagtgtttccagctatcatttcgtcttggatgtcaccaacaattaacctcccatttccatttcaaacatctgc 5397182  T
Q  156 tgcca 160  Q
    |||||    
T  5397183 tgcca 5397187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 5344993 - 5345062
Alignment:
Q  55 ctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaa 124  Q
    ||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  5344993 ctgtgtggctatgaaggattctcacgcgatgtatttccatctatcatctggtcttggatgtcaccaacaa 5345062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 5690108 - 5690039
Alignment:
Q  55 ctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaa 124  Q
    ||||||||  |||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  5690108 ctgtgcggacatgaaggattctcacgtgatatatttccatctatcatttggtcttggatgtcaccaacaa 5690039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 5383459 - 5383535
Alignment:
Q  56 tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctc 132  Q
    |||||||| |||||||||| |||||||||||||||||||| ||||||  ||||||||||||  ||||||||||||||    
T  5383459 tgtgcggccatgaaggattctcacgtgatgtgtttccatccatcattaagtcttggatgtcctcaacaaataatctc 5383535  T

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Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 146
Target Start/End: Original strand, 5350527 - 5350611
Alignment:
Q  56 tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctcacatcaccatttca 146  Q
    ||||||||||||||||||||||||||||||||||      |||||||   ||||||||||||||||||||||||| | |||| ||||||||    
T  5350527 tgtgcggctatgaaggattttcacgtgatgtgtt------tatcattcattcttggatgtcaccaacaaataatcacccatccccatttca 5350611  T

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Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 5434168 - 5434243
Alignment:
Q  56 tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatct 131  Q
    ||||||| ||||||||||| ||||  ||| | ||||||| |||||||  |||||||||||||||||||||||||||    
T  5434168 tgtgcggttatgaaggattctcacacgatttatttccatttatcattcagtcttggatgtcaccaacaaataatct 5434243  T

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Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 5447720 - 5447793
Alignment:
Q  56 tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat 129  Q
    ||||||| | ||||||||  || | |||||||||||||||||| ||| |||||||||||||||||| |||||||    
T  5447720 tgtgcggatttgaaggatcctcgcatgatgtgtttccatctattattcggtcttggatgtcaccaagaaataat 5447793  T

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Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 5397215 - 5397278
Alignment:
Q  159 caagtagtagttcccatgaactatcctctttttctaaccaccttcaaaggcttcgaagtctttg 222  Q
    ||||||||||||| || |||||||| |||||||| || || |||| ||||||||||||||||||    
T  5397215 caagtagtagttcgcacgaactatcatctttttcgaaacaacttccaaggcttcgaagtctttg 5397278  T

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Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 146
Target Start/End: Complemental strand, 5284337 - 5284247
Alignment:
Q  56 tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctcacatcaccatttca 146  Q
    ||||||| ||||| ||| ||||| | |||||||||||||  || |||| ||| ||||||||| |||||||||||||| |||  ||||||||    
T  5284337 tgtgcggttatgagggactttcaagcgatgtgtttccattaataattttgtcatggatgtcagcaacaaataatctcccatttccatttca 5284247  T

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Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 5179676 - 5179731
Alignment:
Q  58 tgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggat 113  Q
    ||||||||| ||||||| |||||||||||  |||||| ||||||| ||||||||||    
T  5179676 tgcggctataaaggattctcacgtgatgtagttccatatatcattcggtcttggat 5179731  T

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Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 5281435 - 5281490
Alignment:
Q  58 tgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggat 113  Q
    ||||||||| ||||||| |||||||||||  |||||| ||||||| ||||||||||    
T  5281435 tgcggctataaaggattctcacgtgatgtagttccatatatcattcggtcttggat 5281490  T

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Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 126
Target Start/End: Original strand, 2938282 - 2938311
Alignment:
Q  97 atcatttggtcttggatgtcaccaacaaat 126  Q
    ||||||||||||||||||||||||||||||    
T  2938282 atcatttggtcttggatgtcaccaacaaat 2938311  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 132
Target Start/End: Complemental strand, 5137567 - 5137538
Alignment:
Q  103 tggtcttggatgtcaccaacaaataatctc 132  Q
    ||||||||||||||||||||||||||||||    
T  5137567 tggtcttggatgtcaccaacaaataatctc 5137538  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 5073720 - 5073660
Alignment:
Q  163 tagtagttcccatgaactatcctctttttctaaccaccttcaaaggcttcgaagtctttgg 223  Q
    ||||||||||||||||||||| ||| |||| ||  |||||| | |||||||| ||||||||    
T  5073720 tagtagttcccatgaactatcatctatttccaattaccttccatggcttcgatgtctttgg 5073660  T

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Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 8877742 - 8877815
Alignment:
Q  56 tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat 129  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8877742 tgtgcggctatgaaggattttcgcgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat 8877815  T

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Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 20812421 - 20812476
Alignment:
Q  67 gaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaac 122  Q
    |||||||| ||||||||||| ||||| ||| |||||||||||||||||||||||||    
T  20812421 gaaggattatcacgtgatgtttttccttctctcatttggtcttggatgtcaccaac 20812476  T

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Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 12599112 - 12599054
Alignment:
Q  64 tatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaac 122  Q
    ||||||||||| ||||||||||| ||||| ||| ||| |||||||||||||||||||||    
T  12599112 tatgaaggattatcacgtgatgtttttccttctctcaattggtcttggatgtcaccaac 12599054  T

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Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 20838773 - 20838831
Alignment:
Q  64 tatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaac 122  Q
    ||||||||||| |||| |||||| ||||| ||| |||||||||||||||||||||||||    
T  20838773 tatgaaggattatcacatgatgtttttccttctctcatttggtcttggatgtcaccaac 20838831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 124
Target Start/End: Original strand, 30417963 - 30418021
Alignment:
Q  66 tgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaa 124  Q
    |||||||||| |||||||||| ||||| | | ||||  |||||||||||||||||||||    
T  30417963 tgaaggatttgcacgtgatgtttttccttgtctcatacggtcttggatgtcaccaacaa 30418021  T

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Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 36213777 - 36213707
Alignment:
Q  56 tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaat 126  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36213777 tgtgcggctatgaaggattctcacatgatgtgtttccatctatcatttggtcttggatgtcaccaacaaat 36213707  T

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Target: scaffold0294 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 8848 - 8767
Alignment:
Q  56 tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctcacatc 137  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||||||| ||||    
T  8848 tgtgcggccatgaaggattctcacgtgatgtgtttccatctatcattaagtcttggatgtctccaacaaataatctcccatc 8767  T

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Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 4344787 - 4344849
Alignment:
Q  64 tatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaat 126  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4344787 tatgaaggattctcacgtgatgtgtttccttctatcatttggtcttggatgtcaccaacaaat 4344849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 4320568 - 4320502
Alignment:
Q  55 ctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaa 121  Q
    ||||| || ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  4320568 ctgtgtggatatgaaggattctcacgtgatgtgtttccttctatcatttggtcttggatgtcaccaa 4320502  T

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Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 4361218 - 4361280
Alignment:
Q  64 tatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaat 126  Q
    ||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  4361218 tatgaaggattctcacgtgatgtgtttccttctatcatttcgtcttggatgtcaccaacaaat 4361280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 4123888 - 4123811
Alignment:
Q  55 ctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctc 132  Q
    ||||| || ||||||||||| || |||||||||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  4123888 ctgtgtggatatgaaggattctctcgtgatgtgtttccttctatcatttcgtcttggatgttaccaacaaataatctc 4123811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 4335486 - 4335551
Alignment:
Q  64 tatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat 129  Q
    ||||||||||| || |||||||||||||| ||||| |||||||||||||||  |||||||||||||    
T  4335486 tatgaaggattctcccgtgatgtgtttccttctataatttggtcttggatggtaccaacaaataat 4335551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 6498462 - 6498401
Alignment:
Q  68 aaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat 129  Q
    ||||||||||||||||||| ||||| ||| ||||| ||||||||||||||||| ||||||||    
T  6498462 aaggattttcacgtgatgtatttccttctctcattcggtcttggatgtcaccatcaaataat 6498401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 6532178 - 6532111
Alignment:
Q  58 tgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaa 125  Q
    ||||||| |||||||||||||  |||||| ||||| ||||||||| ||||||||||||||||| ||||    
T  6532178 tgcggctttgaaggattttcaaatgatgtatttccttctatcattcggtcttggatgtcaccatcaaa 6532111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 6545391 - 6545323
Alignment:
Q  61 ggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat 129  Q
    |||| ||||||||||||||||||||| || || ||| ||||| |||||||| |||||||| ||||||||    
T  6545391 ggctttgaaggattttcacgtgatgtattcccttctctcattcggtcttggctgtcaccatcaaataat 6545323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 6588139 - 6588071
Alignment:
Q  61 ggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat 129  Q
    |||| ||||||||||||||||||||| || || ||| ||||| ||||||||||||| ||| ||||||||    
T  6588139 ggctttgaaggattttcacgtgatgtattcccttctctcattcggtcttggatgtcgccatcaaataat 6588071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 6675841 - 6675909
Alignment:
Q  61 ggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat 129  Q
    |||| |||||||||||||| |||||| ||||| ||| |||||  |||||||||||||||| ||||||||    
T  6675841 ggctttgaaggattttcacttgatgtatttccttctctcattaagtcttggatgtcaccatcaaataat 6675909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 6758856 - 6758929
Alignment:
Q  55 ctgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataa 128  Q
    ||||| |||| |||||||||| |||||||| | ||||| | | ||||| ||||| |||||||||||||||||||    
T  6758856 ctgtgtggctttgaaggatttgcacgtgatatatttccttttgtcattcggtctaggatgtcaccaacaaataa 6758929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 6728544 - 6728612
Alignment:
Q  61 ggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat 129  Q
    |||| ||||||||||||||||||||| || || ||| |  |||||||||||||||| ||| ||||||||    
T  6728544 ggctttgaaggattttcacgtgatgtattcccttctcttgtttggtcttggatgtcgccatcaaataat 6728612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 6753098 - 6753165
Alignment:
Q  61 ggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataa 128  Q
    |||| ||||||||||||||||||||| || || ||| ||||| |||||||||| || ||| |||||||    
T  6753098 ggctttgaaggattttcacgtgatgtattcccttctctcattcggtcttggatatcgccatcaaataa 6753165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 6822826 - 6822896
Alignment:
Q  58 tgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataa 128  Q
    ||||||| ||||||||||||||||||||| || || ||| ||||| | |||||||| || ||| |||||||    
T  6822826 tgcggctttgaaggattttcacgtgatgtattcccttctctcattcgctcttggatatcgccatcaaataa 6822896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 6837410 - 6837480
Alignment:
Q  59 gcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat 129  Q
    |||||| ||||||||||||||||||||| || || ||| ||||| | ||||||||||| ||  ||||||||    
T  6837410 gcggctttgaaggattttcacgtgatgtattcccttctctcattcgctcttggatgtcgccttcaaataat 6837480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 4133342 - 4133290
Alignment:
Q  76 tcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataa 128  Q
    |||||||| || ||||| |||||||||  | ||||||||||||||||||||||    
T  4133342 tcacgtgaagtatttccttctatcattcagacttggatgtcaccaacaaataa 4133290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 6651205 - 6651273
Alignment:
Q  61 ggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat 129  Q
    |||| ||||||||||||||| ||||| ||||| | | || || ||||||||||||||||| ||| ||||    
T  6651205 ggctttgaaggattttcacgagatgtatttccttttctcgttcggtcttggatgtcaccatcaactaat 6651273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 6815608 - 6815676
Alignment:
Q  61 ggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat 129  Q
    |||| |||||||||| |||||||||| ||| | ||| || || | ||||||||||||||| ||||||||    
T  6815608 ggctttgaaggatttacacgtgatgtattttcttctctcgttcgctcttggatgtcaccatcaaataat 6815676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 122
Target Start/End: Complemental strand, 3262682 - 3262629
Alignment:
Q  69 aggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaac 122  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  3262682 aggattttcacgtgatgtttttccctctatcatttggtcttggatgtcaccaac 3262629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 3407379 - 3407323
Alignment:
Q  68 aaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaa 124  Q
    ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  3407379 aaggattatcacgtgatgtttttccttctatcatttggtcttggatgtcaccaacaa 3407323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 3314999 - 3315056
Alignment:
Q  64 tatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaa 121  Q
    |||||||| || ||||||||||| ||||| ||||||||||||||||||||||||||||    
T  3314999 tatgaaggtttatcacgtgatgtttttccttctatcatttggtcttggatgtcaccaa 3315056  T

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Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 3286575 - 3286516
Alignment:
Q  64 tatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaaca 123  Q
    ||||||||||| |||| |||||| |||| |||| ||||| ||||||||||||||||||||    
T  3286575 tatgaaggattatcacatgatgtttttcaatctctcattaggtcttggatgtcaccaaca 3286516  T

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Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 31175988 - 31176046
Alignment:
Q  64 tatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaac 122  Q
    ||||||||||| ||| |||| || ||||| ||| |||||||||||||||||||||||||    
T  31175988 tatgaaggattatcatgtgacgtttttccttctctcatttggtcttggatgtcaccaac 31176046  T

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Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 3325060 - 3325003
Alignment:
Q  64 tatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaa 121  Q
    ||||||||| | ||||  ||||| ||||| ||||||||||||||||||||||||||||    
T  3325060 tatgaaggactatcacacgatgtttttccttctatcatttggtcttggatgtcaccaa 3325003  T

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Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 3391596 - 3391536
Alignment:
Q  64 tatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaa 124  Q
    ||||||||||| |||| | |||| ||||| ||| ||||| |||||||||||||||||||||    
T  3391596 tatgaaggattatcacatcatgtttttccttctctcattaggtcttggatgtcaccaacaa 3391536  T

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Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 3364310 - 3364370
Alignment:
Q  64 tatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaa 124  Q
    ||||||||||| |||| | |||| ||||| ||| ||||| |||||||||| ||||||||||    
T  3364310 tatgaaggattatcacatcatgtttttccttctctcattaggtcttggatatcaccaacaa 3364370  T

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Target: scaffold0468 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 6212 - 6146
Alignment:
Q  58 tgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaa 124  Q
    ||||| ||||||||||| ||||||||||| ||||| ||  | |||||||||||||||||||||||||    
T  6212 tgcggatatgaaggattatcacgtgatgtttttccttcccttatttggtcttggatgtcaccaacaa 6146  T

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Target: scaffold0373 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 9826 - 9896
Alignment:
Q  59 gcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat 129  Q
    |||||| ||||||||||||||||||||| || || ||| ||||| | ||||||||||| ||  ||||||||    
T  9826 gcggctttgaaggattttcacgtgatgtattcccttctctcattcgctcttggatgtcgccttcaaataat 9896  T

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Target: scaffold0813 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0813
Description:

Target: scaffold0813; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 4769 - 4701
Alignment:
Q  61 ggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat 129  Q
    |||| ||||||||||||||| ||||| ||||| | | || || ||||||||||||||||| ||| ||||    
T  4769 ggctttgaaggattttcacgagatgtatttccttttctcgttcggtcttggatgtcaccatcaactaat 4701  T

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Target: chr2 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 22584162 - 22584094
Alignment:
Q  56 tgtgcggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaa 124  Q
    |||| |||||||||||| | | | | |||||  |||||||||| |||||||||||||||||| ||||||    
T  22584162 tgtgtggctatgaaggactcttaagcgatgtagttccatctatgatttggtcttggatgtcatcaacaa 22584094  T

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