View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6177_high_2 (Length: 671)

Name: NF6177_high_2
Description: NF6177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6177_high_2
NF6177_high_2
[»] chr7 (35 HSPs)
chr7 (516-624)||(38826614-38826722)
chr7 (241-293)||(45639738-45639790)
chr7 (246-293)||(43596526-43596573)
chr7 (248-293)||(47973872-47973917)
chr7 (249-293)||(18655375-18655419)
chr7 (249-293)||(28000132-28000176)
chr7 (249-293)||(31417516-31417560)
chr7 (249-293)||(44412546-44412590)
chr7 (239-293)||(24374515-24374570)
chr7 (250-288)||(5031922-5031960)
chr7 (245-293)||(15108338-15108387)
chr7 (243-291)||(36374513-36374562)
chr7 (248-288)||(17167805-17167845)
chr7 (250-293)||(1263785-1263828)
chr7 (356-391)||(5835730-5835765)
chr7 (249-288)||(13592734-13592773)
chr7 (247-293)||(19336296-19336343)
chr7 (250-293)||(27241526-27241569)
chr7 (245-293)||(43746126-43746176)
chr7 (250-293)||(48848154-48848197)
chr7 (248-290)||(10659730-10659772)
chr7 (252-290)||(15108090-15108128)
chr7 (247-293)||(18656292-18656337)
chr7 (557-631)||(38814145-38814219)
chr7 (249-290)||(45633715-45633757)
chr7 (233-293)||(1263958-1264019)
chr7 (250-290)||(13701979-13702020)
chr7 (249-290)||(19336042-19336083)
chr7 (247-280)||(21852762-21852795)
chr7 (249-290)||(21852987-21853028)
chr7 (356-389)||(25622137-25622170)
chr7 (249-290)||(30335399-30335440)
chr7 (248-293)||(35097778-35097822)
chr7 (356-391)||(21852992-21853028)
chr7 (356-396)||(35097786-35097826)
[»] chr3 (69 HSPs)
chr3 (249-293)||(31341225-31341269)
chr3 (249-291)||(41301294-41301336)
chr3 (241-290)||(39846597-39846646)
chr3 (249-293)||(1421430-1421473)
chr3 (249-293)||(44512278-44512322)
chr3 (249-293)||(55090257-55090301)
chr3 (250-293)||(33898073-33898116)
chr3 (250-293)||(40066706-40066749)
chr3 (239-293)||(41747295-41747350)
chr3 (250-293)||(44986755-44986798)
chr3 (248-291)||(48418652-48418695)
chr3 (248-290)||(1351484-1351526)
chr3 (248-290)||(11761080-11761122)
chr3 (247-293)||(21549995-21550041)
chr3 (249-291)||(29853406-29853448)
chr3 (249-291)||(30908584-30908625)
chr3 (249-291)||(35359471-35359513)
chr3 (248-293)||(3820492-3820537)
chr3 (249-290)||(9559034-9559075)
chr3 (249-290)||(17261024-17261065)
chr3 (245-290)||(29853644-29853689)
chr3 (248-293)||(31341455-31341500)
chr3 (249-290)||(35434089-35434130)
chr3 (249-290)||(54012605-54012646)
chr3 (248-293)||(54087744-54087789)
chr3 (356-396)||(1421425-1421465)
chr3 (241-293)||(1421552-1421604)
chr3 (249-289)||(25024538-25024578)
chr3 (241-293)||(30271791-30271843)
chr3 (356-392)||(51102333-51102369)
chr3 (249-293)||(53667679-53667723)
chr3 (245-291)||(3841319-3841366)
chr3 (250-289)||(19598926-19598965)
chr3 (247-290)||(33898289-33898332)
chr3 (248-291)||(38703318-38703361)
chr3 (250-293)||(51688011-51688054)
chr3 (250-293)||(54087522-54087565)
chr3 (356-394)||(2680038-2680076)
chr3 (240-289)||(7226058-7226108)
chr3 (251-293)||(8487931-8487973)
chr3 (249-290)||(9650122-9650164)
chr3 (248-290)||(13468246-13468287)
chr3 (248-293)||(15096522-15096568)
chr3 (249-291)||(19301178-19301220)
chr3 (248-293)||(25924039-25924085)
chr3 (356-394)||(30908581-30908619)
chr3 (249-290)||(4548545-4548586)
chr3 (251-280)||(9161250-9161279)
chr3 (250-291)||(20123876-20123917)
chr3 (250-291)||(23388913-23388953)
chr3 (250-291)||(23390086-23390127)
chr3 (249-293)||(24286151-24286196)
chr3 (248-289)||(30451549-30451590)
chr3 (356-396)||(35434094-35434135)
chr3 (249-290)||(51102328-51102368)
chr3 (240-293)||(54012348-54012401)
chr3 (249-293)||(2680041-2680084)
chr3 (249-281)||(16876141-16876173)
chr3 (250-290)||(19756862-19756902)
chr3 (249-288)||(29013405-29013445)
chr3 (356-391)||(31341463-31341499)
chr3 (254-290)||(33887265-33887301)
chr3 (250-293)||(44512499-44512543)
chr3 (246-290)||(45151621-45151665)
chr3 (356-388)||(46550807-46550839)
chr3 (248-280)||(46994118-46994150)
chr3 (249-293)||(52491572-52491616)
chr3 (253-293)||(53460994-53461034)
chr3 (249-293)||(53523391-53523435)
[»] chr4 (58 HSPs)
chr4 (247-290)||(34318653-34318696)
chr4 (251-293)||(8974270-8974312)
chr4 (248-293)||(3475484-3475529)
chr4 (248-293)||(12878673-12878718)
chr4 (248-293)||(13033140-13033185)
chr4 (245-293)||(12144794-12144841)
chr4 (249-293)||(26144157-26144201)
chr4 (249-293)||(46360907-46360951)
chr4 (243-289)||(6439439-6439485)
chr4 (247-293)||(7085839-7085885)
chr4 (251-293)||(20514901-20514943)
chr4 (248-290)||(27450113-27450155)
chr4 (248-290)||(36405657-36405699)
chr4 (249-291)||(54097099-54097141)
chr4 (249-290)||(1952734-1952775)
chr4 (248-293)||(3475708-3475753)
chr4 (248-293)||(15782260-15782305)
chr4 (356-393)||(23981373-23981410)
chr4 (248-293)||(28292051-28292096)
chr4 (243-288)||(31857226-31857271)
chr4 (249-290)||(35370405-35370446)
chr4 (249-290)||(36405870-36405911)
chr4 (249-293)||(46730947-46730992)
chr4 (249-293)||(7086080-7086124)
chr4 (249-293)||(30966611-30966655)
chr4 (248-288)||(33294939-33294979)
chr4 (249-293)||(35904615-35904659)
chr4 (249-293)||(52439338-52439382)
chr4 (250-293)||(5326312-5326355)
chr4 (250-293)||(8590645-8590688)
chr4 (356-391)||(12144802-12144837)
chr4 (247-290)||(13032884-13032927)
chr4 (250-293)||(22451933-22451976)
chr4 (250-293)||(26144361-26144404)
chr4 (250-293)||(34318405-34318448)
chr4 (248-291)||(35904868-35904911)
chr4 (250-293)||(46360688-46360731)
chr4 (249-288)||(47858448-47858487)
chr4 (250-293)||(48613061-48613103)
chr4 (248-290)||(12144543-12144585)
chr4 (248-293)||(24670739-24670785)
chr4 (356-390)||(48613061-48613095)
chr4 (247-293)||(51902124-51902169)
chr4 (249-291)||(52439582-52439623)
chr4 (248-289)||(6439183-6439224)
chr4 (257-290)||(15782528-15782561)
chr4 (249-290)||(23981368-23981408)
chr4 (248-289)||(35804084-35804125)
chr4 (248-293)||(40450256-40450301)
chr4 (250-290)||(4431292-4431332)
chr4 (250-293)||(5419986-5420030)
chr4 (356-392)||(9884953-9884989)
chr4 (249-293)||(9884954-9884997)
chr4 (248-288)||(18509981-18510021)
chr4 (240-288)||(29104149-29104197)
chr4 (356-391)||(35904874-35904910)
chr4 (249-281)||(42861380-42861412)
chr4 (249-293)||(42861628-42861672)
[»] chr2 (58 HSPs)
chr2 (250-293)||(5558466-5558509)
chr2 (248-293)||(13691989-13692034)
chr2 (249-290)||(23834483-23834524)
chr2 (245-290)||(24951899-24951944)
chr2 (248-293)||(32845676-32845721)
chr2 (246-291)||(35916379-35916424)
chr2 (248-293)||(36944244-36944289)
chr2 (249-293)||(7327767-7327811)
chr2 (246-290)||(8214576-8214620)
chr2 (243-291)||(14793245-14793293)
chr2 (249-293)||(16139130-16139174)
chr2 (249-293)||(28739407-28739451)
chr2 (249-293)||(32845456-32845500)
chr2 (249-293)||(45632739-45632783)
chr2 (244-291)||(8214337-8214384)
chr2 (244-290)||(1060837-1060883)
chr2 (248-290)||(14793472-14793514)
chr2 (248-290)||(24952072-24952114)
chr2 (248-290)||(43766498-43766540)
chr2 (241-290)||(8898290-8898339)
chr2 (252-293)||(40385245-40385286)
chr2 (250-290)||(17920245-17920285)
chr2 (249-293)||(22552504-22552548)
chr2 (250-290)||(29640763-29640803)
chr2 (249-293)||(41611574-41611618)
chr2 (249-293)||(45632542-45632586)
chr2 (250-293)||(8467207-8467250)
chr2 (246-293)||(11115256-11115303)
chr2 (250-293)||(17688167-17688210)
chr2 (250-293)||(31108597-31108640)
chr2 (250-289)||(32596405-32596444)
chr2 (249-288)||(34181824-34181863)
chr2 (247-290)||(43015218-43015260)
chr2 (356-391)||(43015223-43015258)
chr2 (356-401)||(14793477-14793523)
chr2 (251-293)||(17920092-17920134)
chr2 (248-290)||(33441503-33441545)
chr2 (250-288)||(38358510-38358548)
chr2 (248-290)||(39341264-39341306)
chr2 (248-290)||(39341372-39341414)
chr2 (249-293)||(493726-493771)
chr2 (249-293)||(13691743-13691788)
chr2 (359-399)||(16361159-16361200)
chr2 (356-393)||(18048814-18048851)
chr2 (248-293)||(25299329-25299374)
chr2 (248-293)||(36944002-36944047)
chr2 (253-293)||(1020383-1020423)
chr2 (250-293)||(7785079-7785123)
chr2 (249-293)||(8898446-8898490)
chr2 (356-399)||(8898454-8898498)
chr2 (249-293)||(18544020-18544064)
chr2 (254-290)||(26756444-26756480)
chr2 (357-392)||(32649852-32649888)
chr2 (237-293)||(33563719-33563775)
chr2 (240-280)||(38877048-38877088)
chr2 (248-288)||(41101029-41101069)
chr2 (250-290)||(44610927-44610967)
chr2 (250-293)||(44612503-44612547)
[»] chr8 (44 HSPs)
chr8 (356-394)||(43888949-43888987)
chr8 (240-293)||(3448886-3448939)
chr8 (248-293)||(22686741-22686786)
chr8 (248-293)||(23564100-23564145)
chr8 (248-293)||(38687525-38687570)
chr8 (247-291)||(45530499-45530543)
chr8 (250-293)||(3785525-3785568)
chr8 (249-291)||(39301880-39301922)
chr8 (249-291)||(43383006-43383048)
chr8 (248-293)||(11961117-11961162)
chr8 (249-290)||(21692622-21692663)
chr8 (245-290)||(29723850-29723895)
chr8 (248-293)||(38132075-38132120)
chr8 (249-290)||(41708827-41708868)
chr8 (253-293)||(15152303-15152343)
chr8 (250-290)||(19158184-19158224)
chr8 (249-293)||(23565893-23565937)
chr8 (250-290)||(26537971-26538011)
chr8 (247-290)||(12523545-12523588)
chr8 (250-289)||(18367026-18367065)
chr8 (250-293)||(23566140-23566182)
chr8 (248-293)||(5160513-5160559)
chr8 (245-290)||(11105765-11105811)
chr8 (248-293)||(11105963-11106009)
chr8 (356-390)||(23566148-23566182)
chr8 (252-290)||(26711350-26711388)
chr8 (356-394)||(39302138-39302176)
chr8 (356-390)||(43889052-43889086)
chr8 (356-392)||(4923514-4923551)
chr8 (247-291)||(11424109-11424154)
chr8 (252-281)||(12501994-12502023)
chr8 (249-290)||(19157929-19157970)
chr8 (356-396)||(21692627-21692668)
chr8 (252-293)||(29724098-29724139)
chr8 (248-289)||(30222105-30222146)
chr8 (246-290)||(31343360-31343405)
chr8 (249-293)||(37611495-37611540)
chr8 (247-290)||(20076401-20076445)
chr8 (253-293)||(23564250-23564289)
chr8 (356-392)||(23564258-23564294)
chr8 (249-293)||(26538191-26538235)
chr8 (247-290)||(38661632-38661676)
chr8 (244-292)||(38687344-38687392)
chr8 (249-293)||(41709027-41709071)
[»] chr1 (40 HSPs)
chr1 (249-291)||(24004084-24004126)
chr1 (246-293)||(10176433-10176480)
chr1 (248-291)||(16555323-16555366)
chr1 (247-290)||(36454278-36454321)
chr1 (250-293)||(37847785-37847828)
chr1 (248-290)||(13296033-13296075)
chr1 (249-291)||(26486785-26486827)
chr1 (246-291)||(36454499-36454545)
chr1 (250-291)||(7454889-7454930)
chr1 (249-290)||(13295834-13295875)
chr1 (356-397)||(15710817-15710858)
chr1 (248-293)||(16555543-16555588)
chr1 (249-290)||(52413120-52413161)
chr1 (249-293)||(17724280-17724324)
chr1 (249-293)||(24004764-24004808)
chr1 (250-293)||(24465903-24465947)
chr1 (240-288)||(31883443-31883491)
chr1 (250-290)||(35384473-35384513)
chr1 (250-290)||(39160549-39160589)
chr1 (249-293)||(50880070-50880114)
chr1 (250-293)||(27142818-27142861)
chr1 (247-290)||(35168025-35168068)
chr1 (247-293)||(46208196-46208243)
chr1 (250-293)||(46583826-46583869)
chr1 (246-288)||(21771059-21771101)
chr1 (248-293)||(37847600-37847645)
chr1 (249-290)||(39160433-39160474)
chr1 (247-280)||(39657270-39657303)
chr1 (247-291)||(48954950-48954995)
chr1 (250-290)||(972841-972881)
chr1 (249-293)||(1632498-1632542)
chr1 (249-293)||(4352121-4352164)
chr1 (250-290)||(6607173-6607213)
chr1 (249-293)||(15710809-15710852)
chr1 (356-391)||(16555551-16555587)
chr1 (251-291)||(18654012-18654052)
chr1 (248-288)||(23889675-23889715)
chr1 (249-293)||(26399531-26399575)
chr1 (251-291)||(31879944-31879984)
chr1 (248-288)||(31974775-31974815)
[»] chr5 (32 HSPs)
chr5 (249-286)||(27433519-27433556)
chr5 (248-293)||(28593538-28593583)
chr5 (240-293)||(35936528-35936581)
chr5 (250-293)||(4633954-4633997)
chr5 (250-293)||(9672897-9672940)
chr5 (250-293)||(10598319-10598362)
chr5 (250-293)||(13012435-13012478)
chr5 (250-293)||(13083845-13083888)
chr5 (250-293)||(36518873-36518916)
chr5 (251-290)||(37631599-37631638)
chr5 (248-293)||(5661888-5661933)
chr5 (249-293)||(18254382-18254426)
chr5 (250-290)||(31601749-31601789)
chr5 (253-293)||(34889579-34889618)
chr5 (250-293)||(1497329-1497372)
chr5 (249-288)||(25963140-25963179)
chr5 (251-293)||(4221737-4221779)
chr5 (248-293)||(12014485-12014531)
chr5 (356-390)||(13012647-13012681)
chr5 (240-293)||(18254141-18254195)
chr5 (356-390)||(28519649-28519683)
chr5 (248-293)||(31261229-31261272)
chr5 (249-290)||(34048235-34048277)
chr5 (249-286)||(2724483-2724520)
chr5 (240-293)||(7899939-7899992)
chr5 (245-293)||(10331900-10331949)
chr5 (256-293)||(28519493-28519530)
chr5 (247-291)||(35980915-35980960)
chr5 (251-291)||(4633761-4633801)
chr5 (249-293)||(20992701-20992745)
chr5 (247-290)||(27433741-27433785)
chr5 (250-290)||(28519644-28519683)
[»] scaffold0032 (1 HSPs)
scaffold0032 (249-289)||(71651-71691)
[»] chr6 (47 HSPs)
chr6 (249-293)||(7017069-7017113)
chr6 (356-396)||(21226720-21226760)
chr6 (250-293)||(7017312-7017355)
chr6 (250-293)||(7313451-7313494)
chr6 (245-293)||(33352375-33352425)
chr6 (250-293)||(33352629-33352672)
chr6 (248-291)||(33552786-33552829)
chr6 (240-293)||(1310085-1310139)
chr6 (251-293)||(19417947-19417989)
chr6 (249-291)||(25562153-25562195)
chr6 (249-291)||(26101667-26101709)
chr6 (248-293)||(24602428-24602473)
chr6 (249-293)||(1309785-1309829)
chr6 (238-290)||(19376054-19376105)
chr6 (356-392)||(19376064-19376100)
chr6 (249-293)||(19376204-19376248)
chr6 (359-394)||(229547-229582)
chr6 (250-293)||(2181317-2181360)
chr6 (243-290)||(21604113-21604160)
chr6 (250-293)||(27967466-27967509)
chr6 (248-291)||(31733050-31733093)
chr6 (249-290)||(308321-308363)
chr6 (358-392)||(2181571-2181605)
chr6 (248-293)||(10366399-10366445)
chr6 (356-390)||(10790356-10790390)
chr6 (251-293)||(15959607-15959649)
chr6 (248-293)||(21604368-21604414)
chr6 (356-409)||(25562136-25562189)
chr6 (356-409)||(26101650-26101703)
chr6 (251-293)||(27967713-27967755)
chr6 (244-293)||(31826420-31826470)
chr6 (253-290)||(7313694-7313731)
chr6 (250-291)||(10790350-10790390)
chr6 (249-290)||(13420188-13420229)
chr6 (248-289)||(14985326-14985367)
chr6 (249-290)||(29239718-29239759)
chr6 (249-290)||(31656366-31656406)
chr6 (249-290)||(31826214-31826255)
chr6 (249-290)||(33225441-33225482)
chr6 (249-293)||(2181561-2181604)
chr6 (356-392)||(7998506-7998542)
chr6 (249-289)||(13462619-13462659)
chr6 (249-289)||(21226725-21226764)
chr6 (249-289)||(22362955-22362995)
chr6 (236-288)||(28038881-28038933)
chr6 (253-293)||(33225603-33225643)
chr6 (251-291)||(33936441-33936481)
[»] scaffold0053 (1 HSPs)
scaffold0053 (248-291)||(29893-29936)
[»] scaffold0318 (1 HSPs)
scaffold0318 (247-293)||(12395-12441)
[»] scaffold1797 (1 HSPs)
scaffold1797 (249-293)||(471-516)
[»] scaffold0597 (1 HSPs)
scaffold0597 (244-293)||(6492-6541)
[»] scaffold0192 (1 HSPs)
scaffold0192 (249-290)||(14464-14505)
[»] scaffold0013 (1 HSPs)
scaffold0013 (248-293)||(149483-149528)
[»] scaffold0010 (1 HSPs)
scaffold0010 (249-293)||(145562-145607)
[»] scaffold0009 (2 HSPs)
scaffold0009 (244-293)||(263197-263246)
scaffold0009 (244-290)||(150242-150289)
[»] scaffold0111 (1 HSPs)
scaffold0111 (249-293)||(29697-29741)
[»] scaffold0334 (3 HSPs)
scaffold0334 (250-293)||(4315-4357)
scaffold0334 (356-390)||(4323-4357)
scaffold0334 (356-396)||(4066-4106)
[»] scaffold0002 (2 HSPs)
scaffold0002 (356-394)||(342659-342697)
scaffold0002 (249-293)||(342651-342694)
[»] scaffold0001 (1 HSPs)
scaffold0001 (248-290)||(53539-53581)
[»] scaffold0511 (2 HSPs)
scaffold0511 (249-290)||(5443-5484)
scaffold0511 (248-293)||(5217-5264)
[»] scaffold0034 (1 HSPs)
scaffold0034 (250-293)||(83429-83473)


Alignment Details
Target: chr7 (Bit Score: 101; Significance: 1e-49; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 516 - 624
Target Start/End: Complemental strand, 38826722 - 38826614
Alignment:
Q  516 attgaagaacgtgacttgaagggaaaaataagtgtgtgttgtgaatgtgatgaatatgaataagaacgaggattgttcaaactcatatcttcctgaagaa 615  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38826722 attgaagaacgtgacttgaagggaaaaataagtgcgtgttgtgaatgtgatgaatatgaataagaacgaggattgttcaaactcatatctttctgaagaa 38826623  T
Q  616 ttatgggca 624  Q
    |||||||||    
T  38826622 ttatgggca 38826614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 241 - 293
Target Start/End: Complemental strand, 45639790 - 45639738
Alignment:
Q  241 ttaattatagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||| ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  45639790 ttaattttagggttaatggtgctttaccccctgtaatataggtcattttttgt 45639738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 43596573 - 43596526
Alignment:
Q  246 tatagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  43596573 tatagggttaatggtgctttaccccctgtaatataggtcattttttgt 43596526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 47973917 - 47973872
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||||||||||||||||| || |||||||||    
T  47973917 tagggttaatggtgctttatcccctgtaatataggttattttttgt 47973872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 18655375 - 18655419
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  18655375 agggttaatggtgctttaccccctgtaatataggtcattttttgt 18655419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 28000176 - 28000132
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  28000176 agggttaatggtgctttaccccctgtaatataggtcattttttgt 28000132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 31417560 - 31417516
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  31417560 agggttaatggtgctttaccccctgtaatataggtcattttttgt 31417516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 44412590 - 44412546
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  44412590 agggttaatggtgctttaccccctgtaatataggtcattttttgt 44412546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 24374570 - 24374515
Alignment:
Q  239 tattaattatagggttaatggtgctttat-cccctgtaatatatgtcattttttgt 293  Q
    |||| ||| |||||||||||||||||||| ||||||||||||| ||||||||||||    
T  24374570 tatttattttagggttaatggtgctttatccccctgtaatataggtcattttttgt 24374515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 288
Target Start/End: Original strand, 5031922 - 5031960
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattt 288  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  5031922 gggttaatggtgctttaccccctgtaatatatgtcattt 5031960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 15108387 - 15108338
Alignment:
Q  245 ttatagggttaatggtgctttatcc-cctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||||||| || ||||||||||| ||||||||||||    
T  15108387 ttatagggttaatggtgctttaccctcctgtaatataggtcattttttgt 15108338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 243 - 291
Target Start/End: Complemental strand, 36374562 - 36374513
Alignment:
Q  243 aattatagggttaatggtgctttatccc-ctgtaatatatgtcatttttt 291  Q
    ||||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  36374562 aattatagggttaatagtgctttatccctctgtaatataggtcatttttt 36374513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 17167845 - 17167805
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattt 288  Q
    |||||||||| |||||||||||||||||||||| |||||||    
T  17167845 tagggttaatagtgctttatcccctgtaatataggtcattt 17167805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 1263785 - 1263828
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| |||||||||||||  |||||||||||    
T  1263785 gggttaatggtgctttaccccctgtaatatagatcattttttgt 1263828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 356 - 391
Target Start/End: Complemental strand, 5835765 - 5835730
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaaccct 391  Q
    |||||||||||||||||||||| |||||||||||||    
T  5835765 tgacctatattacaggagtaaaacaccattaaccct 5835730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 13592734 - 13592773
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattt 288  Q
    |||||||||||||| ||| |||||||||||||||||||||    
T  13592734 agggttaatggtgcattaccccctgtaatatatgtcattt 13592773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 19336343 - 19336296
Alignment:
Q  247 atagggttaatggtgctttatcccc-tgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  19336343 atagggttaatggtgctttacccccctgtaatataggtcattttttgt 19336296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 27241526 - 27241569
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||| |||| |||| ||||||||||||||||||||||||||    
T  27241526 gggttaaaggtgttttaccccctgtaatatatgtcattttttgt 27241569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 43746176 - 43746126
Alignment:
Q  245 ttatagggttaatggtgctttatcccc--tgtaatatatgtcattttttgt 293  Q
    |||||||||||||||| ||||| ||||  ||||||||||||||||||||||    
T  43746176 ttatagggttaatggtactttaccccccctgtaatatatgtcattttttgt 43746126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 48848197 - 48848154
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| ||||| ||||||| ||||||||||||    
T  48848197 gggttaatggtgctttaccccctataatataggtcattttttgt 48848154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 290
Target Start/End: Original strand, 10659730 - 10659772
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||||| |||||| |||||| |||||||||    
T  10659730 tagggttaatggtgctttaccccctgcaatataggtcattttt 10659772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 15108090 - 15108128
Alignment:
Q  252 gttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  15108090 gttaatggtgctttaccccctgtaatataggtcattttt 15108128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 18656337 - 18656292
Alignment:
Q  247 atagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||||||    
T  18656337 atagggttaatggtgatttatccc-tgtaatataggtcattttttgt 18656292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 557 - 631
Target Start/End: Complemental strand, 38814219 - 38814145
Alignment:
Q  557 tgaatgtgatgaatatgaataagaacgaggattgttcaaactcatatcttcctgaagaattatgggcaattatat 631  Q
    ||||||||||| |||||||||||   | ||| |||||||||||| |||||| |||||| || |||| ||||||||    
T  38814219 tgaatgtgatggatatgaataaggtagtggagtgttcaaactcaaatcttcttgaagatttgtgggtaattatat 38814145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 45633757 - 45633715
Alignment:
Q  249 agggttaatggtgctttatcccc-tgtaatatatgtcattttt 290  Q
    ||||||||||||||||||||||| ||||||||| |||||||||    
T  45633757 agggttaatggtgctttatccccatgtaatataggtcattttt 45633715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 1264019 - 1263958
Alignment:
Q  233 cactattattaattatagggttaatggtgctttatcccc-tgtaatatatgtcattttttgt 293  Q
    |||||| | ||| |||||||||||||||| |||| |||| ||||||||| ||||||||||||    
T  1264019 cactataaataaatatagggttaatggtgttttacccccttgtaatataggtcattttttgt 1263958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 13702020 - 13701979
Alignment:
Q  250 gggttaatggtgctttat-cccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  13702020 gggttaatggtgctttattcccctgtaatataggtcattttt 13701979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 19336042 - 19336083
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||| |||| ||||||||||||| |||||||||    
T  19336042 agggttaatggtgttttaccccctgtaatataggtcattttt 19336083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 280
Target Start/End: Original strand, 21852762 - 21852795
Alignment:
Q  247 atagggttaatggtgctttatcccctgtaatata 280  Q
    |||||||||||||||||||| |||||||||||||    
T  21852762 atagggttaatggtgctttaccccctgtaatata 21852795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 21853028 - 21852987
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| | ||||||||||| |||||||||    
T  21853028 agggttaatggtgctttacctcctgtaatataggtcattttt 21852987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 389
Target Start/End: Complemental strand, 25622170 - 25622137
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaacc 389  Q
    |||||||||||||||| |||||||||||||||||    
T  25622170 tgacctatattacaggggtaaagcaccattaacc 25622137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 30335440 - 30335399
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||| ||||||||||| ||||||||||||| |||||||||    
T  30335440 agggttgatggtgctttaccccctgtaatataggtcattttt 30335399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 35097822 - 35097778
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||    
T  35097822 tagggttaatggtgtttta-cccctgtaatataggtcattttttgt 35097778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 356 - 391
Target Start/End: Original strand, 21852992 - 21853028
Alignment:
Q  356 tgacctatattacaggag-taaagcaccattaaccct 391  Q
    |||||||||||||||||| ||||||||||||||||||    
T  21852992 tgacctatattacaggaggtaaagcaccattaaccct 21853028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 35097786 - 35097826
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaacccttaatt 396  Q
    |||||||||||||||| ||||| ||||||||||||| ||||    
T  35097786 tgacctatattacaggggtaaaacaccattaaccctaaatt 35097826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 31341225 - 31341269
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  31341225 agggttaatggtgctttatcccctgtaatataggtcattttttgt 31341269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 249 - 291
Target Start/End: Complemental strand, 41301336 - 41301294
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  41301336 agggttaatggtgctttaccccctgtaatatatgtcatttttt 41301294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 290
Target Start/End: Complemental strand, 39846646 - 39846597
Alignment:
Q  241 ttaattatagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||| ||||||||||||||||||| ||||||||||||| |||||||||    
T  39846646 ttaattttagggttaatggtgctttaccccctgtaatataggtcattttt 39846597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 1421430 - 1421473
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  1421430 agggttaatggtgcttta-cccctgtaatatatgtcattttttgt 1421473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 44512278 - 44512322
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||    
T  44512278 agggttaatggtgctttaccccctataatatatgtcattttttgt 44512322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 55090301 - 55090257
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  55090301 agggttaatggtgctttaccccctgtaatataggtcattttttgt 55090257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 33898073 - 33898116
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  33898073 gggttaatggtgctttaccccctgtaatataggtcattttttgt 33898116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 40066706 - 40066749
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  40066706 gggttaatggtgctttaccccctgtaatataggtcattttttgt 40066749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 41747295 - 41747350
Alignment:
Q  239 tattaattatagggttaatggtgcttta-tcccctgtaatatatgtcattttttgt 293  Q
    |||||||| |||||||||||||||||||  ||||||||||||| ||||||||||||    
T  41747295 tattaattctagggttaatggtgctttacccccctgtaatataggtcattttttgt 41747350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 44986798 - 44986755
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||| |||||||||||||||||| ||||||||||||    
T  44986798 gggttaatggtgttttatcccctgtaatataggtcattttttgt 44986755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 248 - 291
Target Start/End: Original strand, 48418652 - 48418695
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  48418652 tagggttaatggtgctttaccccctgtaatataggtcatttttt 48418695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 290
Target Start/End: Complemental strand, 1351526 - 1351484
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  1351526 tagggttaatggtgctttaccccctgtaatataggtcattttt 1351484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 290
Target Start/End: Original strand, 11761080 - 11761122
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  11761080 tagggttaatggtgctttaccccctgtaatataggtcattttt 11761122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 21550041 - 21549995
Alignment:
Q  247 atagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||    
T  21550041 atagggttaatggtgctttaccgcctgtaatataggtcattttttgt 21549995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 291
Target Start/End: Original strand, 29853406 - 29853448
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||||||| ||||||||||||| ||||||||||    
T  29853406 agggttaatggtgctttaccccctgtaatataagtcatttttt 29853448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 291
Target Start/End: Original strand, 30908584 - 30908625
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  30908584 agggttaatggtgcttta-cccctgtaatatatgtcatttttt 30908625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 291
Target Start/End: Original strand, 35359471 - 35359513
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||||||| ||||||||||||| ||||||||||    
T  35359471 agggttaatggtgctttaccccctgtaatataggtcatttttt 35359513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 3820492 - 3820537
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||    
T  3820492 tagggttaatggtgttttaccccctgtaatataggtcattttttgt 3820537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 9559034 - 9559075
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| |||||||||||||||| ||||||    
T  9559034 agggttaatggtgctttaccccctgtaatatatgttattttt 9559075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 17261024 - 17261065
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  17261024 agggttaatggtgctttaccccctgtaatataggtcattttt 17261065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 290
Target Start/End: Complemental strand, 29853689 - 29853644
Alignment:
Q  245 ttatagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||||||| ||||||||||||| ||| |||||    
T  29853689 ttatagggttaatggtgctttaccccctgtaatataggtcgttttt 29853644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 31341500 - 31341455
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||||    
T  31341500 tagggttaatggtgctttacctcctgtaatataggtcattttttgt 31341455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 35434130 - 35434089
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  35434130 agggttaatggtgctttaccccctgtaatataggtcattttt 35434089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 54012646 - 54012605
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  54012646 agggttaatggtgctttaccccctgtaatataggtcattttt 54012605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 54087789 - 54087744
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||    
T  54087789 tagggttaatggtgttttaccccctgtaatataggtcattttttgt 54087744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 1421465 - 1421425
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaacccttaatt 396  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  1421465 tgacatatattacaggggtaaagcaccattaacccttaatt 1421425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 293
Target Start/End: Complemental strand, 1421604 - 1421552
Alignment:
Q  241 ttaattatagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||| |||||||||||||| | || ||||||||||||| ||||||||||||    
T  1421604 ttaattttagggttaatggtgatgtaccccctgtaatataggtcattttttgt 1421552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 25024538 - 25024578
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcatttt 289  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  25024538 agggttaatagtgctttaccccctgtaatatatgtcatttt 25024578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 293
Target Start/End: Complemental strand, 30271843 - 30271791
Alignment:
Q  241 ttaattatagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| |  ||||| | ||||||||||||||||||||||||    
T  30271843 ttaattatagggttaataggtctttacctcctgtaatatatgtcattttttgt 30271791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 51102333 - 51102369
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaaccctt 392  Q
    |||||||||||||||| ||||||||||||||||||||    
T  51102333 tgacctatattacaggggtaaagcaccattaaccctt 51102369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 53667679 - 53667723
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||||    
T  53667679 agggttaatggtgatttaccccctgtaatataggtcattttttgt 53667723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 3841366 - 3841319
Alignment:
Q  245 ttatagggttaatggtgcttta-tcccctgtaatatatgtcatttttt 291  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  3841366 ttatagggttaatggtgctttacccccctgtaatataggtcatttttt 3841319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 289
Target Start/End: Complemental strand, 19598965 - 19598926
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcatttt 289  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  19598965 gggttaatggtgctttaccccctgtaatataagtcatttt 19598926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 247 - 290
Target Start/End: Complemental strand, 33898332 - 33898289
Alignment:
Q  247 atagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||||| ||||||||||||| || ||||||    
T  33898332 atagggttaatggtgctttaccccctgtaatataggttattttt 33898289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 291
Target Start/End: Complemental strand, 38703361 - 38703318
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||    
T  38703361 tagggttaatagtgttttaccccctgtaatatatgtcatttttt 38703318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 51688011 - 51688054
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| |||||||||||||  |||||||||||    
T  51688011 gggttaatggtgctttaccccctgtaatatagatcattttttgt 51688054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 54087522 - 54087565
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| ||||| ||||||| ||||||||||||    
T  54087522 gggttaatggtgctttaccccctctaatataggtcattttttgt 54087565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 394
Target Start/End: Complemental strand, 2680076 - 2680038
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaacccttaa 394  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  2680076 tgacctatattacagggggaaagcaccattaacccttaa 2680038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 7226058 - 7226108
Alignment:
Q  240 attaattatagggttaatggtgcttta-tcccctgtaatatatgtcatttt 289  Q
    |||||||||||||||||| ||||||||  ||||||||||||| ||||||||    
T  7226058 attaattatagggttaatagtgctttacccccctgtaatataggtcatttt 7226108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 8487973 - 8487931
Alignment:
Q  251 ggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||| |||| ||||||||||||| ||||||||||||    
T  8487973 ggttaatggtgttttaccccctgtaatataggtcattttttgt 8487931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 9650164 - 9650122
Alignment:
Q  249 agggttaatggtgctttatcccc-tgtaatatatgtcattttt 290  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  9650164 agggttaatggtgctttacccccatgtaatatatgtcattttt 9650122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 290
Target Start/End: Original strand, 13468246 - 13468287
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  13468246 tagggttaatggtgcttta-ccccagtaatatatgtcattttt 13468287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 15096522 - 15096568
Alignment:
Q  248 tagggttaatggtgctttatcccc-tgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  15096522 tagggttaatggtgctttacccccctgtaatataggtcattttttgt 15096568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 291
Target Start/End: Original strand, 19301178 - 19301220
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||    
T  19301178 agggttaatggtgttttaccccctgtaatataggtcatttttt 19301220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 25924039 - 25924085
Alignment:
Q  248 tagggttaatggtgctttatcccc-tgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  25924039 tagggttaatggtgctttacccccctgtaatataggtcattttttgt 25924085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 394
Target Start/End: Complemental strand, 30908619 - 30908581
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaacccttaa 394  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  30908619 tgacatatattacaggggtaaagcaccattaacccttaa 30908581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 4548545 - 4548586
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| ||||| ||||||| |||||||||    
T  4548545 agggttaatggtgctttaccccctctaatataggtcattttt 4548586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 280
Target Start/End: Original strand, 9161250 - 9161279
Alignment:
Q  251 ggttaatggtgctttatcccctgtaatata 280  Q
    ||||||||||||||||||||||||||||||    
T  9161250 ggttaatggtgctttatcccctgtaatata 9161279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 20123917 - 20123876
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||| |||| ||||||||||||| ||||||||||    
T  20123917 gggttaatggtgttttaccccctgtaatataggtcatttttt 20123876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 23388953 - 23388913
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    ||||||||||||||||| ||||||||||| ||||||||||||    
T  23388953 gggttaatggtgcttta-cccctgtaatacatgtcatttttt 23388913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 23390086 - 23390127
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||||||  ||||||||||||||| |||||||    
T  23390086 gggttaatggtgctttactccctgtaatatatgttatttttt 23390127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 24286151 - 24286196
Alignment:
Q  249 agggttaatggtgctttatccc-ctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||    
T  24286151 agggttaatggtgctttaccccactgtaatataggtcattttttgt 24286196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 30451590 - 30451549
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcatttt 289  Q
    |||||||||| |||||||| ||||||||||||| ||||||||    
T  30451590 tagggttaattgtgctttaccccctgtaatataggtcatttt 30451549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 35434094 - 35434135
Alignment:
Q  356 tgacctatattacaggag-taaagcaccattaacccttaatt 396  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  35434094 tgacctatattacagggggtaaagcaccattaacccttaatt 35434135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 51102368 - 51102328
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  51102368 agggttaatggtgcttta-cccctgtaatataggtcattttt 51102328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 54012348 - 54012401
Alignment:
Q  240 attaattatagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||| ||| ||||||||||||| |||| ||| ||||||||| ||||||||||||    
T  54012348 attatttaaagggttaatggtgttttaccccatgtaatataggtcattttttgt 54012401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 2680041 - 2680084
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||  ||||||||||||| ||||||||||||    
T  2680041 agggttaatggtgctttc-cccctgtaatataggtcattttttgt 2680084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 281
Target Start/End: Original strand, 16876141 - 16876173
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatat 281  Q
    |||||||||||||||||| ||||||||||||||    
T  16876141 agggttaatggtgctttaccccctgtaatatat 16876173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 19756862 - 19756902
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||| ||||| ||||||| |||||||||    
T  19756862 gggttaatggtgctttaccccctataatataggtcattttt 19756902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 29013405 - 29013445
Alignment:
Q  249 agggttaatggtgctttat-cccctgtaatatatgtcattt 288  Q
    ||||||||||||||||||| ||||||||||||| |||||||    
T  29013405 agggttaatggtgctttatccccctgtaatataggtcattt 29013445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 356 - 391
Target Start/End: Original strand, 31341463 - 31341499
Alignment:
Q  356 tgacctatattacaggag-taaagcaccattaaccct 391  Q
    |||||||||||||||||| ||||||||||||||||||    
T  31341463 tgacctatattacaggaggtaaagcaccattaaccct 31341499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 254 - 290
Target Start/End: Complemental strand, 33887301 - 33887265
Alignment:
Q  254 taatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||| || ||||||||||||||||||||    
T  33887301 taatggtgctttaccctctgtaatatatgtcattttt 33887265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 44512543 - 44512499
Alignment:
Q  250 gggttaatggtgctttatcccc-tgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||||    
T  44512543 gggttaatggtgctttacccccctgtaatataggtcattttttgt 44512499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 45151621 - 45151665
Alignment:
Q  246 tatagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||  |||||||| ||||||||||||| |||||||||    
T  45151621 tatagggttaacagtgctttaccccctgtaatataggtcattttt 45151665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 46550839 - 46550807
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaac 388  Q
    |||||||||||||||| ||||||||||||||||    
T  46550839 tgacctatattacaggggtaaagcaccattaac 46550807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 280
Target Start/End: Complemental strand, 46994150 - 46994118
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatata 280  Q
    ||||||||||||||||||| |||||||||||||    
T  46994150 tagggttaatggtgctttaccccctgtaatata 46994118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 52491572 - 52491616
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||| |||| ||| ||||||||| ||||||||||||    
T  52491572 agggttaatggtgttttaccccatgtaatataggtcattttttgt 52491616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 53460994 - 53461034
Alignment:
Q  253 ttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||| ||||||||||||||||||  |||||||||||    
T  53460994 ttaatggtgttttatcccctgtaatatagttcattttttgt 53461034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 53523391 - 53523435
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| | | ||||||||| ||||||||||||    
T  53523391 agggttaatggtgctttacctcttgtaatataggtcattttttgt 53523435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 247 - 290
Target Start/End: Complemental strand, 34318696 - 34318653
Alignment:
Q  247 atagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  34318696 atagggttaatggtgctttaccccctgtaatatatgtcattttt 34318653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 8974270 - 8974312
Alignment:
Q  251 ggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  8974270 ggttaatggtgctttatcccctgtaatataggtcattttttgt 8974312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 3475484 - 3475529
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  3475484 tagggttaatggtgctttaccccctgtaatataggtcattttttgt 3475529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 12878673 - 12878718
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  12878673 tagggttaatggtgctttaccccctgtaatataggtcattttttgt 12878718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 13033185 - 13033140
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  13033185 tagggttaatggtgctttaccccctgtaatataggtcattttttgt 13033140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 12144841 - 12144794
Alignment:
Q  245 ttatagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  12144841 ttatagggttaatggtgcttta-cccctgtaatataggtcattttttgt 12144794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 26144157 - 26144201
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  26144157 agggttaatggtgctttaccccctgtaatataggtcattttttgt 26144201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 46360951 - 46360907
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  46360951 agggttaatggtgctttaccccctgtaatataggtcattttttgt 46360907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 6439485 - 6439439
Alignment:
Q  243 aattatagggttaatggtgctttatcccctgtaatatatgtcatttt 289  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||||    
T  6439485 aattatagggttattggtgctttaccccctgtaatataggtcatttt 6439439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 7085839 - 7085885
Alignment:
Q  247 atagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||||    
T  7085839 atagggttaatagtgctttactccctgtaatatatgtcattttttgt 7085885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 20514943 - 20514901
Alignment:
Q  251 ggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||| ||||||||||||| ||||||||||||    
T  20514943 ggttaatggtgctttaccccctgtaatataggtcattttttgt 20514901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 290
Target Start/End: Complemental strand, 27450155 - 27450113
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||| |||| |||||||||||||||||||||||    
T  27450155 tagggttaatggtgttttaccccctgtaatatatgtcattttt 27450113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 290
Target Start/End: Original strand, 36405657 - 36405699
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  36405657 tagggttaatggtgctttaccccctgtaatataggtcattttt 36405699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 291
Target Start/End: Original strand, 54097099 - 54097141
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||||||| ||||||||||||| ||||||||||    
T  54097099 agggttaatggtgctttaccccctgtaatataggtcatttttt 54097141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 1952734 - 1952775
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  1952734 agggttaatggtgctttaccccctgtaatataggtcattttt 1952775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 3475753 - 3475708
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  3475753 tagggttaatggtgctttgccccctgtaatataggtcattttttgt 3475708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 15782260 - 15782305
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  15782260 tagggttaatggtgctttaccccttgtaatataggtcattttttgt 15782305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 356 - 393
Target Start/End: Original strand, 23981373 - 23981410
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaaccctta 393  Q
    |||||||||||||||| |||||||||||||||||||||    
T  23981373 tgacctatattacaggggtaaagcaccattaaccctta 23981410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 28292051 - 28292096
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||    
T  28292051 tagggttaatggtgttttaccccctgtaatataggtcattttttgt 28292096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 31857271 - 31857226
Alignment:
Q  243 aattatagggttaatggtgctttatcccctgtaatatatgtcattt 288  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||    
T  31857271 aattaaagggttaatagtgctttaccccctgtaatatatgtcattt 31857226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 35370446 - 35370405
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  35370446 agggttaatggtgctttaccccctgtaatataggtcattttt 35370405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 36405911 - 36405870
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  36405911 agggttaatggtgctttaccccctgtaatataggtcattttt 36405870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 46730947 - 46730992
Alignment:
Q  249 agggttaatggtgctttatcccct-gtaatatatgtcattttttgt 293  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||    
T  46730947 agggttaatggtgttttatccccttgtaatatatgtcattttttgt 46730992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 7086124 - 7086080
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||||    
T  7086124 agggttaatggtgttttaccccctgtaatataggtcattttttgt 7086080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 30966611 - 30966655
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||||    
T  30966611 agggttaatggtgctttaccccctataatataggtcattttttgt 30966655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 33294939 - 33294979
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattt 288  Q
    ||||||||||||||||||| ||||||||||||| |||||||    
T  33294939 tagggttaatggtgctttaccccctgtaatataggtcattt 33294979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 35904615 - 35904659
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||||||||||||| || |||||||||    
T  35904615 agggttaatggtgctttaccccctgtaatataagttattttttgt 35904659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 52439338 - 52439382
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||||    
T  52439338 agggttaatggtgttttaccccctgtaatataggtcattttttgt 52439382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 5326355 - 5326312
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||| ||||| ||||||||||||| ||||||||||||    
T  5326355 gggttaatggtactttaacccctgtaatataggtcattttttgt 5326312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 8590645 - 8590688
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||    
T  8590645 gggttaatggtgatttaccccctgtaatataggtcattttttgt 8590688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 356 - 391
Target Start/End: Original strand, 12144802 - 12144837
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaaccct 391  Q
    |||||||||||||||| |||||||||||||||||||    
T  12144802 tgacctatattacaggggtaaagcaccattaaccct 12144837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 247 - 290
Target Start/End: Original strand, 13032884 - 13032927
Alignment:
Q  247 atagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||| |||| ||||||||||||| |||||||||    
T  13032884 atagggttaatggtgttttaccccctgtaatataggtcattttt 13032927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 22451933 - 22451976
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||    
T  22451933 gggttaatggtgttttaccccctgtaatataggtcattttttgt 22451976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 26144404 - 26144361
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| |||||||||||||  |||||||||||    
T  26144404 gggttaatggtgctttaccccctgtaatatagatcattttttgt 26144361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 34318405 - 34318448
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||    
T  34318405 gggttaatggtgttttaccccctgtaatataggtcattttttgt 34318448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 291
Target Start/End: Complemental strand, 35904911 - 35904868
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||||||||  |||||||||||| ||||||||||    
T  35904911 tagggttaatggtgctttactccctgtaatataggtcatttttt 35904868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 46360688 - 46360731
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||    
T  46360688 gggttaatggtgttttagcccctgtaatataggtcattttttgt 46360731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 47858487 - 47858448
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattt 288  Q
    |||||||||||||||||| ||||||||||||| |||||||    
T  47858487 agggttaatggtgctttaccccctgtaatataggtcattt 47858448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 48613061 - 48613103
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  48613061 gggttaatggtgcttta-cccctgtaatataggtcattttttgt 48613103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 290
Target Start/End: Original strand, 12144543 - 12144585
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||    
T  12144543 tagggttaatggtgctttaccccctgtaatataggtctttttt 12144585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 24670785 - 24670739
Alignment:
Q  248 tagggttaatggtgctttatcccc-tgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  24670785 tagggttaatggtgctttacccccctgtaatataggtcattttttgt 24670739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 390
Target Start/End: Complemental strand, 48613095 - 48613061
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaaccc 390  Q
    |||||||||||||||| ||||||||||||||||||    
T  48613095 tgacctatattacaggggtaaagcaccattaaccc 48613061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 51902169 - 51902124
Alignment:
Q  247 atagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||| |||| |||||||||||||||| |||||||||    
T  51902169 atagggttaatggtgtttta-cccctgtaatatatgttattttttgt 51902124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 291
Target Start/End: Complemental strand, 52439623 - 52439582
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||||||| || |||||||||||||||||||||    
T  52439623 agggttaatggtgcttta-cctctgtaatatatgtcatttttt 52439582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 6439183 - 6439224
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcatttt 289  Q
    |||||||||| |||||||| ||||||||||||| ||||||||    
T  6439183 tagggttaatagtgctttaccccctgtaatataggtcatttt 6439224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 290
Target Start/End: Complemental strand, 15782561 - 15782528
Alignment:
Q  257 tggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||||||||| |||||||||    
T  15782561 tggtgctttatcccctgtaatataggtcattttt 15782528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 23981408 - 23981368
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  23981408 agggttaatggtgcttta-cccctgtaatataggtcattttt 23981368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 35804125 - 35804084
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcatttt 289  Q
    |||||||||||||||||||  |||||||||||| ||||||||    
T  35804125 tagggttaatggtgctttacaccctgtaatataggtcatttt 35804084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 40450256 - 40450301
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||| |||| ||||||||||||| || |||||||||    
T  40450256 tagggttaatggtgttttaccccctgtaatataggttattttttgt 40450301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 4431292 - 4431332
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||| ||||||||||||| || ||||||    
T  4431292 gggttaatggtgctttaccccctgtaatataggttattttt 4431332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 5419986 - 5420030
Alignment:
Q  250 gggttaatggtgcttta-tcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||| |||| |||||||||||||| ||||||||||||    
T  5419986 gggttaatggtgttttactcccctgtaatataggtcattttttgt 5420030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 9884989 - 9884953
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaaccctt 392  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  9884989 tgacctatattacaggggtaaaacaccattaaccctt 9884953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 9884954 - 9884997
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||||    
T  9884954 agggttaatggtgtttta-cccctgtaatataggtcattttttgt 9884997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 18509981 - 18510021
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattt 288  Q
    |||||||||| ||| |||||||||||||||||| |||||||    
T  18509981 tagggttaatagtgttttatcccctgtaatataggtcattt 18510021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 29104149 - 29104197
Alignment:
Q  240 attaattatagggttaatggtgctttatcccctgtaatatatgtcattt 288  Q
    ||||| |||||||||||| ||| |||| ||||||||||||| |||||||    
T  29104149 attaaatatagggttaatagtgttttaccccctgtaatataggtcattt 29104197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 356 - 391
Target Start/End: Original strand, 35904874 - 35904910
Alignment:
Q  356 tgacctatattacagg-agtaaagcaccattaaccct 391  Q
    |||||||||||||||| ||||||||||||||||||||    
T  35904874 tgacctatattacagggagtaaagcaccattaaccct 35904910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 281
Target Start/End: Original strand, 42861380 - 42861412
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatat 281  Q
    |||||||||||||||||| ||||||||||||||    
T  42861380 agggttaatggtgctttaccccctgtaatatat 42861412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 42861672 - 42861628
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||| || |||| ||||||||||||| ||||||||||||    
T  42861672 agggttaatgatgatttaccccctgtaatataggtcattttttgt 42861628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 5558509 - 5558466
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  5558509 gggttaatggtgctttatcccctgtaatataggtcattttttgt 5558466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 13692034 - 13691989
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  13692034 tagggttaatggtgctttaccccctgtaatataagtcattttttgt 13691989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 23834524 - 23834483
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  23834524 agggttaatggtgctttaccccctgtaatatatgtcattttt 23834483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 24951899 - 24951944
Alignment:
Q  245 ttatagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||    
T  24951899 ttatagggttaatggtgctttaacccctgtaatataggtcattttt 24951944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 32845721 - 32845676
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  32845721 tagggttaatggtgctttaccccctgtaatataggtcattttttgt 32845676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 246 - 291
Target Start/End: Original strand, 35916379 - 35916424
Alignment:
Q  246 tatagggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||||||||||  |||||||||||||||||||||||    
T  35916379 tatagggttaatggtgctttactccctgtaatatatgtcatttttt 35916424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 36944289 - 36944244
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  36944289 tagggttaatggtgctttaccccctgtaatataggtcattttttgt 36944244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 7327767 - 7327811
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  7327767 agggttaatggtgctttaccccctgtaatataggtcattttttgt 7327811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 8214620 - 8214576
Alignment:
Q  246 tatagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  8214620 tatagggttaatggtgctttaccccctgtaatataggtcattttt 8214576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 243 - 291
Target Start/End: Original strand, 14793245 - 14793293
Alignment:
Q  243 aattatagggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    ||||||||||||||||||| |||| ||||||||||||| ||||||||||    
T  14793245 aattatagggttaatggtgttttaccccctgtaatataggtcatttttt 14793293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 16139174 - 16139130
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||    
T  16139174 agggttaatagtgctttatcccctgtaatataggtcattttttgt 16139130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 28739407 - 28739451
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  28739407 agggttaatggtgctttaccccctgtaatataggtcattttttgt 28739451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 32845456 - 32845500
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  32845456 agggttaatggtgctttaccccctgtaatataggtcattttttgt 32845500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 45632783 - 45632739
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||    
T  45632783 agggttaatggtgctttatcccctttaatataggtcattttttgt 45632739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 244 - 291
Target Start/End: Original strand, 8214337 - 8214384
Alignment:
Q  244 attatagggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||||    
T  8214337 attatagggttaatggtgttttaccccctgtaatataggtcatttttt 8214384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 1060883 - 1060837
Alignment:
Q  244 attatagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||||||||| |||| |||||||| |||||||||    
T  1060883 attatagggttaatggtgctttaccccccgtaatataagtcattttt 1060837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 290
Target Start/End: Complemental strand, 14793514 - 14793472
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  14793514 tagggttaatggtgctttaccccctgtaatataggtcattttt 14793472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 290
Target Start/End: Complemental strand, 24952114 - 24952072
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  24952114 tagggttaatggtgctttaccccctgtaatataggtcattttt 24952072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 290
Target Start/End: Complemental strand, 43766540 - 43766498
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  43766540 tagggttaatggtgctttaccccctgtaatataggtcattttt 43766498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 8898290 - 8898339
Alignment:
Q  241 ttaattatagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||| ||||||||||||||||||||| || |||||||||| |||||||||    
T  8898290 ttaaatatagggttaatggtgctttaccctctgtaatataggtcattttt 8898339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 40385245 - 40385286
Alignment:
Q  252 gttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||| ||||||||||||| ||||||||||||    
T  40385245 gttaatggtgctttaccccctgtaatataggtcattttttgt 40385286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 17920285 - 17920245
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  17920285 gggttaatggtgctttaccccctgtaatataggtcattttt 17920245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 22552504 - 22552548
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||||    
T  22552504 agggttaatggtgttttaccccctgtaatataggtcattttttgt 22552548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 29640763 - 29640803
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  29640763 gggttaatggtgctttaccccctgtaatataggtcattttt 29640803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 41611618 - 41611574
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||||    
T  41611618 agggttaatggtgttttaccccctgtaatataggtcattttttgt 41611574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 45632542 - 45632586
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||||    
T  45632542 agggttaatggtgttttaccccctgtaatataggtcattttttgt 45632586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 8467207 - 8467250
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||  |||||||||||| ||||||||||||    
T  8467207 gggttaatggtgctttactccctgtaatataggtcattttttgt 8467250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 11115256 - 11115303
Alignment:
Q  246 tatagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||| |||| ||||||||||||| || |||||||||    
T  11115256 tatagggttaatggtgttttaccccctgtaatataggttattttttgt 11115303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 17688210 - 17688167
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||    
T  17688210 gggttaatggtgttttaccccctgtaatataggtcattttttgt 17688167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 31108640 - 31108597
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||    
T  31108640 gggttaatggtgttttaccccctgtaatataggtcattttttgt 31108597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 289
Target Start/End: Original strand, 32596405 - 32596444
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcatttt 289  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  32596405 gggttaatggtgctttatcccctgtaatataggttatttt 32596444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 34181863 - 34181824
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattt 288  Q
    |||||||||||||||||| ||||| |||||||||||||||    
T  34181863 agggttaatggtgctttaccccctataatatatgtcattt 34181824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 247 - 290
Target Start/End: Complemental strand, 43015260 - 43015218
Alignment:
Q  247 atagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  43015260 atagggttaatggtgcttta-cccctgtaatataggtcattttt 43015218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 356 - 391
Target Start/End: Original strand, 43015223 - 43015258
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaaccct 391  Q
    |||||||||||||||| |||||||||||||||||||    
T  43015223 tgacctatattacaggggtaaagcaccattaaccct 43015258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 401
Target Start/End: Original strand, 14793477 - 14793523
Alignment:
Q  356 tgacctatattacaggag-taaagcaccattaacccttaattataat 401  Q
    |||||||||||||||| | |||||||||||||||||| |||||||||    
T  14793477 tgacctatattacagggggtaaagcaccattaaccctaaattataat 14793523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 17920092 - 17920134
Alignment:
Q  251 ggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||| |||| ||||||||||||| ||||||||||||    
T  17920092 ggttaatggtgttttaccccctgtaatataggtcattttttgt 17920134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 290
Target Start/End: Original strand, 33441503 - 33441545
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||||| ||||||||||||| || ||||||    
T  33441503 tagggttaatggtgctttaccccctgtaatataggttattttt 33441545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 288
Target Start/End: Complemental strand, 38358548 - 38358510
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattt 288  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  38358548 gggttaatggtgctttaccccctgtaatataggtcattt 38358510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 290
Target Start/End: Original strand, 39341264 - 39341306
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||| |||| ||||||||||||| |||||||||    
T  39341264 tagggttaatggtgttttaccccctgtaatataggtcattttt 39341306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 290
Target Start/End: Complemental strand, 39341414 - 39341372
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||| |||| ||||||||||||| |||||||||    
T  39341414 tagggttaatggtgttttaccccctgtaatataggtcattttt 39341372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 493726 - 493771
Alignment:
Q  249 agggttaatggtgctttatcccc-tgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||    
T  493726 agggttaatggtgctttacccccctgtaatataggtcattttttgt 493771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 13691743 - 13691788
Alignment:
Q  249 agggttaatggtgctttatcccc-tgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||    
T  13691743 agggttaatggtgctttacccccctgtaatataggtcattttttgt 13691788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 16361159 - 16361200
Alignment:
Q  359 cctatattacaggag-taaagcaccattaacccttaattata 399  Q
    ||||||||||||||| ||||||||||||||||||| ||||||    
T  16361159 cctatattacaggaggtaaagcaccattaaccctttattata 16361200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 393
Target Start/End: Complemental strand, 18048851 - 18048814
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaaccctta 393  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  18048851 tgacctatattacaggggtaaagcactattaaccctta 18048814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 25299329 - 25299374
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||| ||||||||||| |||||||||||  |||||||||||    
T  25299329 tagggttaacggtgctttatctcctgtaatatagatcattttttgt 25299374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 36944002 - 36944047
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||| ||||||||| |||| ||||||||||||| ||||||||||||    
T  36944002 taggattaatggtgttttaccccctgtaatataggtcattttttgt 36944047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 1020423 - 1020383
Alignment:
Q  253 ttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||| |||||| ||||||| |||||||||||    
T  1020423 ttaatggtgctttaccccctgaaatatatatcattttttgt 1020383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 7785079 - 7785123
Alignment:
Q  250 gggttaatggtgctttat-cccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| |||||| |||||| ||||||||||||    
T  7785079 gggttaatggtgctttatccccctgaaatataggtcattttttgt 7785123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 8898490 - 8898446
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| | ||| ||||||| ||||||||||||    
T  8898490 agggttaatggtgctttacctcctataatataggtcattttttgt 8898446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 356 - 399
Target Start/End: Original strand, 8898454 - 8898498
Alignment:
Q  356 tgacctatattacaggag-taaagcaccattaacccttaattata 399  Q
    |||||||||||| ||||| ||||||||||||||||||||| ||||    
T  8898454 tgacctatattataggaggtaaagcaccattaacccttaaatata 8898498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 18544064 - 18544020
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||| |||| || |||||||||| ||||||||||||    
T  18544064 agggttaatggtgttttaccctctgtaatataggtcattttttgt 18544020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 254 - 290
Target Start/End: Original strand, 26756444 - 26756480
Alignment:
Q  254 taatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  26756444 taatggtgctttaccccctgtaatataggtcattttt 26756480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 357 - 392
Target Start/End: Complemental strand, 32649888 - 32649852
Alignment:
Q  357 gacctatattacagg-agtaaagcaccattaaccctt 392  Q
    ||||||||||||||| |||||||||||||||||||||    
T  32649888 gacctatattacagggagtaaagcaccattaaccctt 32649852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 33563719 - 33563775
Alignment:
Q  237 attattaattatagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||| ||||| | ||||||||||| |||| ||||||||||||| || |||||||||    
T  33563719 attataaattaaaaggttaatggtgttttaccccctgtaatataggttattttttgt 33563775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 38877088 - 38877048
Alignment:
Q  240 attaattatagggttaatggtgctttatcccctgtaatata 280  Q
    |||||||||||||||||| | |||||| |||||||||||||    
T  38877088 attaattatagggttaatagggctttaccccctgtaatata 38877048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 41101069 - 41101029
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattt 288  Q
    |||||||||| |||||||| ||||||||||||| |||||||    
T  41101069 tagggttaatagtgctttaccccctgtaatataggtcattt 41101029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 44610927 - 44610967
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||| ||||||||||||| || ||||||    
T  44610927 gggttaatggtgctttaccccctgtaatataggttattttt 44610967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 44612547 - 44612503
Alignment:
Q  250 gggttaatggtgctttatcccc-tgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||||    
T  44612547 gggttaatggtgctttacccccctgtaatataggtcattttttgt 44612503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 356 - 394
Target Start/End: Complemental strand, 43888987 - 43888949
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaacccttaa 394  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43888987 tgacctatattacaggagtaaagcaccattaacccttaa 43888949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 3448939 - 3448886
Alignment:
Q  240 attaattatagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||| |||| ||||||||||| |||||||||||||||||| ||||||||||||    
T  3448939 attaaatataaggttaatggtgttttatcccctgtaatataggtcattttttgt 3448886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 22686741 - 22686786
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  22686741 tagggttaatggtgctttaccccctgtaatataggtcattttttgt 22686786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 23564100 - 23564145
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  23564100 tagggttaatggtgctttaccccctgtaatataggtcattttttgt 23564145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 38687570 - 38687525
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||    
T  38687570 tagggttaatggtgttttatcccctgtaatataggtcattttttgt 38687525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 45530499 - 45530543
Alignment:
Q  247 atagggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  45530499 atagggttaatggtgctttaccccctgtaatataggtcatttttt 45530543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 3785525 - 3785568
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  3785525 gggttaatggtgctttaccccctgtaatataggtcattttttgt 3785568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 291
Target Start/End: Original strand, 39301880 - 39301922
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||||||||||||||||||||| || |||||||    
T  39301880 agggttaatggtgctttatcccctgtaatataggttatttttt 39301922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 291
Target Start/End: Complemental strand, 43383048 - 43383006
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||||||| ||||||||||||| ||||||||||    
T  43383048 agggttaatggtgctttaccccctgtaatataggtcatttttt 43383006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 11961162 - 11961117
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||    
T  11961162 tagggttaatggtggtttaccccctgtaatataggtcattttttgt 11961117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 21692663 - 21692622
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  21692663 agggttaatggtgctttaccccctgtaatataggtcattttt 21692622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 29723850 - 29723895
Alignment:
Q  245 ttatagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||| ||||||| |||||||||| ||||||||||||||||||||||    
T  29723850 ttattgggttaacggtgctttataccctgtaatatatgtcattttt 29723895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 38132120 - 38132075
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||    
T  38132120 tagggttaatggtgttttaccccctgtaatataggtcattttttgt 38132075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 41708827 - 41708868
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  41708827 agggttaatggtgctttaccccctgtaatataggtcattttt 41708868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 15152343 - 15152303
Alignment:
Q  253 ttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||| ||||||||||||| ||||||||||||    
T  15152343 ttaatggtgctttaccccctgtaatataggtcattttttgt 15152303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 19158224 - 19158184
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  19158224 gggttaatggtgctttaccccctgtaatataggtcattttt 19158184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 23565893 - 23565937
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| || |||||||||| ||||||||||||    
T  23565893 agggttaatggtgctttaccctctgtaatataggtcattttttgt 23565937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 26537971 - 26538011
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  26537971 gggttaatggtgctttaccccttgtaatatatgtcattttt 26538011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 247 - 290
Target Start/End: Original strand, 12523545 - 12523588
Alignment:
Q  247 atagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||| |||||||||||||||||||| ||||||| |||||||||    
T  12523545 ataggattaatggtgctttatcccctataatataggtcattttt 12523588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 289
Target Start/End: Original strand, 18367026 - 18367065
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcatttt 289  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  18367026 gggttaatggtgctttaccccctgtaatataggtcatttt 18367065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 23566182 - 23566140
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  23566182 gggttaatggtgcttta-cccctgtaatataggtcattttttgt 23566140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 5160559 - 5160513
Alignment:
Q  248 tagggttaatggtgctttatcccc-tgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  5160559 tagggttaatggtgctttacccccctgtaatataggtcattttttgt 5160513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 11105765 - 11105811
Alignment:
Q  245 ttatagggttaatggtgctttat-cccctgtaatatatgtcattttt 290  Q
    |||| |||||||||||||||||| ||||||||||||| |||||||||    
T  11105765 ttattgggttaatggtgctttatccccctgtaatataggtcattttt 11105811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 11106009 - 11105963
Alignment:
Q  248 tagggttaatggtgctttatcccc-tgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  11106009 tagggttaatggtgctttacccccctgtaatataggtcattttttgt 11105963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 390
Target Start/End: Original strand, 23566148 - 23566182
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaaccc 390  Q
    |||||||||||||||| ||||||||||||||||||    
T  23566148 tgacctatattacaggggtaaagcaccattaaccc 23566182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 26711350 - 26711388
Alignment:
Q  252 gttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  26711350 gttaatggtgttttaccccctgtaatatatgtcattttt 26711388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 394
Target Start/End: Original strand, 39302138 - 39302176
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaacccttaa 394  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  39302138 tgacctatattacaggggtaaaacaccattaacccttaa 39302176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 390
Target Start/End: Original strand, 43889052 - 43889086
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaaccc 390  Q
    |||||||||||||||| ||||||||||||||||||    
T  43889052 tgacctatattacaggggtaaagcaccattaaccc 43889086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 4923514 - 4923551
Alignment:
Q  356 tgacctatattaca-ggagtaaagcaccattaaccctt 392  Q
    |||||||||||||| |||||||||||||||||||||||    
T  4923514 tgacctatattacaaggagtaaagcaccattaaccctt 4923551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 11424109 - 11424154
Alignment:
Q  247 atagggttaatggtgctttatcccc-tgtaatatatgtcatttttt 291  Q
    |||||||||||||||||||| |||| ||||||||| ||||||||||    
T  11424109 atagggttaatggtgctttacccccttgtaatataggtcatttttt 11424154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 281
Target Start/End: Complemental strand, 12502023 - 12501994
Alignment:
Q  252 gttaatggtgctttatcccctgtaatatat 281  Q
    ||||||||||||||||||||||||||||||    
T  12502023 gttaatggtgctttatcccctgtaatatat 12501994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 19157929 - 19157970
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| ||||||| ||||| |||||||||    
T  19157929 agggttaatggtgctttaccccctgttatataggtcattttt 19157970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 21692627 - 21692668
Alignment:
Q  356 tgacctatattacaggag-taaagcaccattaacccttaatt 396  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  21692627 tgacctatattacagggggtaaagcaccattaacccttaatt 21692668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 293
Target Start/End: Complemental strand, 29724139 - 29724098
Alignment:
Q  252 gttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||    
T  29724139 gttaatggtgctttaccccctataatataggtcattttttgt 29724098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 30222146 - 30222105
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcatttt 289  Q
    |||||||||| |||||||| ||||||||||||| ||||||||    
T  30222146 tagggttaatagtgctttaccccctgtaatataggtcatttt 30222105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 31343360 - 31343405
Alignment:
Q  246 tatagggttaatggtgcttta-tcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||||||  ||||||||||||| |||||||||    
T  31343360 tatagggttaatggtgctttacccccctgtaatataggtcattttt 31343405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 37611540 - 37611495
Alignment:
Q  249 agggttaatggtgctttatcccc-tgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||    
T  37611540 agggttaatggtgctttacccccctgtaatataggtcattttttgt 37611495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 290
Target Start/End: Complemental strand, 20076445 - 20076401
Alignment:
Q  247 atagggttaatggtgctttat-cccctgtaatatatgtcattttt 290  Q
    |||||||||||||| |||||| ||||||||||||| |||||||||    
T  20076445 atagggttaatggtactttatccccctgtaatataggtcattttt 20076401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 23564289 - 23564250
Alignment:
Q  253 ttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||| ||||||||||||| ||||||||||||    
T  23564289 ttaatggtgcttta-cccctgtaatataggtcattttttgt 23564250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 23564258 - 23564294
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaaccctt 392  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  23564258 tgacctatattacaggggtaaagcaccattaatcctt 23564294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 26538235 - 26538191
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||| || |||| ||||||||||||| ||||||||||||    
T  26538235 agggttaatgatgttttaccccctgtaatataggtcattttttgt 26538191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 290
Target Start/End: Complemental strand, 38661676 - 38661632
Alignment:
Q  247 atagggttaatggtgctttat-cccctgtaatatatgtcattttt 290  Q
    ||||||||||||||| ||||| ||||||||||||| |||||||||    
T  38661676 atagggttaatggtgttttatccccctgtaatataggtcattttt 38661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 38687344 - 38687392
Alignment:
Q  244 attatagggttaatggtgctttatcccctgtaatatatgtcattttttg 292  Q
    |||| ||||||||| |||||||| ||| ||||||||| |||||||||||    
T  38687344 attaaagggttaatagtgctttaccccttgtaatatacgtcattttttg 38687392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 41709071 - 41709027
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||| ||||||| |||||||| |||| ||||||||||||    
T  41709071 agggttaatgatgctttaccccctgtattataggtcattttttgt 41709027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 249 - 291
Target Start/End: Original strand, 24004084 - 24004126
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  24004084 agggttaatggtgctttaccccctgtaatatatgtcatttttt 24004126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 10176433 - 10176480
Alignment:
Q  246 tatagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||||||    
T  10176433 tatagggttaatggtgctttaccccccgtaatataggtcattttttgt 10176480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 248 - 291
Target Start/End: Original strand, 16555323 - 16555366
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  16555323 tagggttaatggtgctttaccccctgtaatataggtcatttttt 16555366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 290
Target Start/End: Original strand, 36454278 - 36454321
Alignment:
Q  247 atagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||||| ||||| |||||||||||||||||    
T  36454278 atagggttaatggtgctttaccccctttaatatatgtcattttt 36454321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 37847828 - 37847785
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  37847828 gggttaatggtgctttaccccctgtaatataggtcattttttgt 37847785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 290
Target Start/End: Complemental strand, 13296075 - 13296033
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  13296075 tagggttaatggtgctttaccccctgtaatataagtcattttt 13296033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 291
Target Start/End: Complemental strand, 26486827 - 26486785
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||||||| ||||||||||||| ||||||||||    
T  26486827 agggttaatggtgctttaccccctgtaatataggtcatttttt 26486785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 36454545 - 36454499
Alignment:
Q  246 tatagggttaatggtgctttatcc-cctgtaatatatgtcatttttt 291  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  36454545 tatagggttaatggtgctttatcctcctgtaatataggtcatttttt 36454499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 7454889 - 7454930
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    ||||||||||||||||| ||||||||||||| ||||||||||    
T  7454889 gggttaatggtgctttaccccctgtaatataggtcatttttt 7454930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 13295834 - 13295875
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  13295834 agggttaatggtgctttaccccctgtaatataagtcattttt 13295875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 356 - 397
Target Start/End: Original strand, 15710817 - 15710858
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaacccttaatta 397  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  15710817 tgacctatattacaagggtaaagcaccattaacccttaatta 15710858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 16555588 - 16555543
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||||  |||||||||||| ||||||||||||    
T  16555588 tagggttaatggtgctttactccctgtaatataggtcattttttgt 16555543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 52413120 - 52413161
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  52413120 agggttaatggtgctttaccccctgtaatataggtcattttt 52413161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 17724324 - 17724280
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||||    
T  17724324 agggttaatggtgttttaccccctgtaatataggtcattttttgt 17724280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 24004808 - 24004764
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||||    
T  24004808 agggttaatggtgctttaccccttgtaatataggtcattttttgt 24004764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 24465903 - 24465947
Alignment:
Q  250 gggttaatggtgctttatc-ccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||    
T  24465903 gggttaatggtgctttatcaccctgtaatataggtcattttttgt 24465947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 31883443 - 31883491
Alignment:
Q  240 attaattatagggttaatggtgctttatcccctgtaatatatgtcattt 288  Q
    ||||||| |||||||||| ||| |||| |||||||||||||||||||||    
T  31883443 attaattttagggttaatagtgttttaccccctgtaatatatgtcattt 31883491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 35384513 - 35384473
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  35384513 gggttaatggtgctttaccccctgtaatataggtcattttt 35384473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 39160589 - 39160549
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  39160589 gggttaatggtgctttaccccctgtaatataggtcattttt 39160549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 50880114 - 50880070
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||||    
T  50880114 agggttaatggtgttttaccccctgtaatataagtcattttttgt 50880070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 27142861 - 27142818
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| ||||||||||||| || |||||||||    
T  27142861 gggttaatggtgctttaccccctgtaatataggttattttttgt 27142818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 247 - 290
Target Start/End: Complemental strand, 35168068 - 35168025
Alignment:
Q  247 atagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||| |||||||| ||||||||||||| |||||||||    
T  35168068 atagggttaatagtgctttaccccctgtaatataggtcattttt 35168025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 46208196 - 46208243
Alignment:
Q  247 atagggttaatggtgctttatc-ccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||||| | |||||||||||| ||||||||||||    
T  46208196 atagggttaatggtgctttacctccctgtaatataggtcattttttgt 46208243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 46583826 - 46583869
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| || |||||||||| ||||||||||||    
T  46583826 gggttaatggtgctttaccctctgtaatataggtcattttttgt 46583869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 21771101 - 21771059
Alignment:
Q  246 tatagggttaatggtgctttatcccctgtaatatatgtcattt 288  Q
    |||||||||||| |||||||| ||||||||||||| |||||||    
T  21771101 tatagggttaatagtgctttaccccctgtaatataggtcattt 21771059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 37847600 - 37847645
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| ||| |||||||||  |||||||||||    
T  37847600 tagggttaatggtgctttaccccatgtaatatagttcattttttgt 37847645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 39160433 - 39160474
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| ||||||| ||||| |||||||||    
T  39160433 agggttaatggtgctttaccccctgtcatataggtcattttt 39160474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 280
Target Start/End: Original strand, 39657270 - 39657303
Alignment:
Q  247 atagggttaatggtgctttatcccctgtaatata 280  Q
    |||||||||||||||||||| |||||||||||||    
T  39657270 atagggttaatggtgctttaccccctgtaatata 39657303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 48954950 - 48954995
Alignment:
Q  247 atagggttaatggtgcttta-tcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||||||| | |||||||||||||| ||||||||||    
T  48954950 atagggttaatggtgcttgactcccctgtaatataggtcatttttt 48954995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 972841 - 972881
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||| |||| ||||||||||||| |||||||||    
T  972841 gggttaatggtgttttaccccctgtaatataggtcattttt 972881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 1632542 - 1632498
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||| || | ||||||||||||| ||||||||||||    
T  1632542 agggttaatggtgtttaaccccctgtaatataggtcattttttgt 1632498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 4352121 - 4352164
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||||||||| ||| ||||||||||||    
T  4352121 agggttaatggtgctttaccccctgtaa-ataggtcattttttgt 4352164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 6607173 - 6607213
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||| | ||||||||||||| |||||||    
T  6607173 gggttaatggtgctttacctcctgtaatatatgccattttt 6607213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 15710852 - 15710809
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||||    
T  15710852 agggttaatggtgcttta-cccttgtaatataggtcattttttgt 15710809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 356 - 391
Target Start/End: Original strand, 16555551 - 16555587
Alignment:
Q  356 tgacctatattacagg-agtaaagcaccattaaccct 391  Q
    |||||||||||||||| ||||||||||||||||||||    
T  16555551 tgacctatattacagggagtaaagcaccattaaccct 16555587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 18654052 - 18654012
Alignment:
Q  251 ggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  18654052 ggttaatggtgttttaccccatgtaatatatgtcatttttt 18654012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 23889675 - 23889715
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattt 288  Q
    ||||||||| ||||||||| ||||||||||||| |||||||    
T  23889675 tagggttaaaggtgctttaccccctgtaatataggtcattt 23889715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 26399575 - 26399531
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| | ||||||||||| || |||||||||    
T  26399575 agggttaatggtgctttacctcctgtaatataggttattttttgt 26399531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 31879944 - 31879984
Alignment:
Q  251 ggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||| ||||||||| ||||||||||||| ||||||||||    
T  31879944 ggttaaaggtgctttaccccctgtaatataggtcatttttt 31879984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 31974775 - 31974815
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattt 288  Q
    ||||||||||||| ||||| ||||||||||||| |||||||    
T  31974775 tagggttaatggtactttaccccctgtaatataggtcattt 31974815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000004; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 27433519 - 27433556
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcat 286  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27433519 agggttaatggtgctttatcccctgtaatatatgtcat 27433556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 28593583 - 28593538
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  28593583 tagggttaatggtgctttaacccctgtaatataggtcattttttgt 28593538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 35936528 - 35936581
Alignment:
Q  240 attaattatagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||  |||||||||||||||||| |||||||||||||||| |||||||||    
T  35936528 attaatttaagggttaatggtgctttaccccctgtaatatatgttattttttgt 35936581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 4633954 - 4633997
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  4633954 gggttaatggtgctttaccccctgtaatataggtcattttttgt 4633997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 9672897 - 9672940
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  9672897 gggttaatggtgctttaccccctgtaatataggtcattttttgt 9672940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 10598319 - 10598362
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  10598319 gggttaatggtgctttaccccctgtaatataggtcattttttgt 10598362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 13012435 - 13012478
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  13012435 gggttaatggtgctttaccccctgtaatataggtcattttttgt 13012478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 13083845 - 13083888
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  13083845 gggttaatggtgctttaccccctgtaatataggtcattttttgt 13083888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 36518916 - 36518873
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  36518916 gggttaatggtgctttaccccctgtaatataggtcattttttgt 36518873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 251 - 290
Target Start/End: Original strand, 37631599 - 37631638
Alignment:
Q  251 ggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  37631599 ggttaatggtgctttaccccctgtaatatatgtcattttt 37631638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 5661933 - 5661888
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||    
T  5661933 tagggttaatggtgctttaccccctgtaatatagatcattttttgt 5661888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 18254426 - 18254382
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||||    
T  18254426 agggttaatggtgatttaccccctgtaatataggtcattttttgt 18254382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 31601749 - 31601789
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  31601749 gggttaatggtgttttaccccctgtaatatatgtcattttt 31601789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 34889579 - 34889618
Alignment:
Q  253 ttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  34889579 ttaatggtgctttatccc-tgtaatatatgtcattttttgt 34889618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 1497329 - 1497372
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||    
T  1497329 gggttaatggtgatttaccccctgtaatataggtcattttttgt 1497372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 25963179 - 25963140
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattt 288  Q
    ||||||||| |||||||||||||||||||||| |||||||    
T  25963179 agggttaatagtgctttatcccctgtaatataggtcattt 25963140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 4221737 - 4221779
Alignment:
Q  251 ggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||| |||| ||||||||||||| ||||||||||||    
T  4221737 ggttaatggtgttttagcccctgtaatataggtcattttttgt 4221779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 12014485 - 12014531
Alignment:
Q  248 tagggttaatggtgctttatcccc-tgtaatatatgtcattttttgt 293  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  12014485 tagggttaagggtgctttatccccctgtaatataggtcattttttgt 12014531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 390
Target Start/End: Original strand, 13012647 - 13012681
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaaccc 390  Q
    |||||||||||||||| ||||||||||||||||||    
T  13012647 tgacctatattacaggggtaaagcaccattaaccc 13012681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 18254141 - 18254195
Alignment:
Q  240 attaattatagggttaatggtgctttat-cccctgtaatatatgtcattttttgt 293  Q
    |||| ||||||||||||||||| ||||| |||||||||||||  |||||||||||    
T  18254141 attatttatagggttaatggtgttttatccccctgtaatatagatcattttttgt 18254195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 390
Target Start/End: Original strand, 28519649 - 28519683
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaaccc 390  Q
    |||||||||||||||| ||||||||||||||||||    
T  28519649 tgacctatattacaggggtaaagcaccattaaccc 28519683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 31261272 - 31261229
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||    
T  31261272 tagggttaatggtgctttat--cctgtaatataggtcattttttgt 31261229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 34048235 - 34048277
Alignment:
Q  249 agggttaatggtgctttat-cccctgtaatatatgtcattttt 290  Q
    |||||||| |||||||||| |||||||||||||||||||||||    
T  34048235 agggttaacggtgctttatacccctgtaatatatgtcattttt 34048277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 2724483 - 2724520
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcat 286  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  2724483 agggttaatggtgctttaccccctgtaatataggtcat 2724520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 7899992 - 7899939
Alignment:
Q  240 attaattatagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||| || |||||||||| || |||| ||||||||||||| ||||||||||||    
T  7899992 attaaataaagggttaatgatgttttaccccctgtaatataggtcattttttgt 7899939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 10331949 - 10331900
Alignment:
Q  245 ttatagggttaatggtgctttatcccc-tgtaatatatgtcattttttgt 293  Q
    |||||||||||||||| ||||| |||| ||||||||| ||||||||||||    
T  10331949 ttatagggttaatggtactttacccccctgtaatataggtcattttttgt 10331900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 28519493 - 28519530
Alignment:
Q  256 atggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  28519493 atggtgctttaccccctgtaatataggtcattttttgt 28519530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 35980915 - 35980960
Alignment:
Q  247 atagggttaatggtgctttatccc-ctgtaatatatgtcatttttt 291  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||    
T  35980915 atagggttaatggtgctttacccctctataatatatgtcatttttt 35980960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 4633761 - 4633801
Alignment:
Q  251 ggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||||| ||| ||||||||| ||||||||||    
T  4633761 ggttaatggtgctttaccccatgtaatataggtcatttttt 4633801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 20992701 - 20992745
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||  |||| ||||||||||||| ||||||||||||    
T  20992701 agggttaatggtaatttaccccctgtaatataggtcattttttgt 20992745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 290
Target Start/End: Complemental strand, 27433785 - 27433741
Alignment:
Q  247 atagggttaatggtgctttatcccc-tgtaatatatgtcattttt 290  Q
    |||||||||||||||||||| |||| ||||||||| |||||||||    
T  27433785 atagggttaatggtgctttacccccttgtaatataggtcattttt 27433741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 28519683 - 28519644
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  28519683 gggttaatggtgcttta-cccctgtaatataggtcattttt 28519644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 71651 - 71691
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcatttt 289  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  71651 agggttaatggtgctttatcccctgtaatatatgttatttt 71691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000002; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 7017069 - 7017113
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  7017069 agggttaatggtgctttaccccctgtaatataggtcattttttgt 7017113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 21226760 - 21226720
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaacccttaatt 396  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  21226760 tgacctatattacaggggtaaagcaccattaacccttaatt 21226720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 7017355 - 7017312
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  7017355 gggttaatggtgctttaccccctgtaatataggtcattttttgt 7017312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 7313451 - 7313494
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  7313451 gggttaatggtgctttaccccctgtaatataggtcattttttgt 7313494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 33352375 - 33352425
Alignment:
Q  245 ttatagggttaatggtgctttatcccc--tgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||||||||    
T  33352375 ttatagggttaatggtgctttaccccccctgtaatatatgtcattttttgt 33352425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 33352672 - 33352629
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  33352672 gggttaatggtgctttaccccctgtaatataggtcattttttgt 33352629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 248 - 291
Target Start/End: Complemental strand, 33552829 - 33552786
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||| |||||||||||||||||| ||||||||||    
T  33552829 tagggttaatggtgttttatcccctgtaatataggtcatttttt 33552786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 1310139 - 1310085
Alignment:
Q  240 attaattatagggttaatggtgcttta-tcccctgtaatatatgtcattttttgt 293  Q
    |||| ||| |||||||||||||||||| |||||||||||||| ||||||||||||    
T  1310139 attatttaaagggttaatggtgctttactcccctgtaatataggtcattttttgt 1310085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 19417947 - 19417989
Alignment:
Q  251 ggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||| ||||||||||||| ||||||||||||    
T  19417947 ggttaatggtgctttaccccctgtaatataggtcattttttgt 19417989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 291
Target Start/End: Original strand, 25562153 - 25562195
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||||||| ||||||||||||| ||||||||||    
T  25562153 agggttaatggtgctttaccccctgtaatataggtcatttttt 25562195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 291
Target Start/End: Original strand, 26101667 - 26101709
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||||||| ||||||||||||| ||||||||||    
T  26101667 agggttaatggtgctttaccccctgtaatataggtcatttttt 26101709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 24602428 - 24602473
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  24602428 tagggttaatggtgctttaccccttgtaatataggtcattttttgt 24602473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 1309785 - 1309829
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||||    
T  1309785 agggttaatggtgatttaccccctgtaatataggtcattttttgt 1309829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 19376054 - 19376105
Alignment:
Q  238 ttattaattatagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||  |||||||||||||||||| ||||||||||||| |||||||||    
T  19376054 ttattaattgaagggttaatggtgcttta-cccctgtaatataggtcattttt 19376105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 19376100 - 19376064
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaaccctt 392  Q
    |||||||||||||||| ||||||||||||||||||||    
T  19376100 tgacctatattacaggggtaaagcaccattaaccctt 19376064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 19376248 - 19376204
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||||    
T  19376248 agggttaatggtgctttaccccctataatataggtcattttttgt 19376204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 359 - 394
Target Start/End: Complemental strand, 229582 - 229547
Alignment:
Q  359 cctatattacaggagtaaagcaccattaacccttaa 394  Q
    ||||||||||||| ||||||||||||||||||||||    
T  229582 cctatattacaggggtaaagcaccattaacccttaa 229547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 2181317 - 2181360
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||    
T  2181317 gggttaatggtgttttaccccctgtaatataggtcattttttgt 2181360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 243 - 290
Target Start/End: Original strand, 21604113 - 21604160
Alignment:
Q  243 aattatagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||||||||| ||||| ||||||| || ||||||    
T  21604113 aattatagggttaatggtgctttaccccctataatataggtaattttt 21604160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 27967466 - 27967509
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||||    
T  27967466 gggttaatggtgctttaccccctgtaatataggtcatcttttgt 27967509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 291
Target Start/End: Original strand, 31733050 - 31733093
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||| ||||||||| |||||||| ||||||||||    
T  31733050 tagggttaatggtgttttatccccagtaatataggtcatttttt 31733093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 308321 - 308363
Alignment:
Q  249 agggttaatggtgctttatcccc-tgtaatatatgtcattttt 290  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  308321 agggttaatggtgctttagccccctgtaatatatgtcattttt 308363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 392
Target Start/End: Original strand, 2181571 - 2181605
Alignment:
Q  358 acctatattacaggagtaaagcaccattaaccctt 392  Q
    |||||||||||||| ||||||||||||||||||||    
T  2181571 acctatattacaggggtaaagcaccattaaccctt 2181605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 10366399 - 10366445
Alignment:
Q  248 tagggttaatggtgctttatcccc-tgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  10366399 tagggttaatggtgctttacccccctgtaatataggtcattttttgt 10366445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 390
Target Start/End: Original strand, 10790356 - 10790390
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaaccc 390  Q
    |||||||||||||||| ||||||||||||||||||    
T  10790356 tgacctatattacaggggtaaagcaccattaaccc 10790390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 15959649 - 15959607
Alignment:
Q  251 ggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||| |||| ||||||||||||| ||||||||||||    
T  15959649 ggttaatggtgttttaccccctgtaatataggtcattttttgt 15959607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 21604414 - 21604368
Alignment:
Q  248 tagggttaatggtgctttatcccc-tgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  21604414 tagggttaatggtgctttacccccctgtaatataggtcattttttgt 21604368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 409
Target Start/End: Complemental strand, 25562189 - 25562136
Alignment:
Q  356 tgacctatattacaggag-taaagcaccattaacccttaattataattctaattt 409  Q
    |||||||||||||||| | ||||||||||||||||||||||| |||| |||||||    
T  25562189 tgacctatattacagggggtaaagcaccattaacccttaatt-taatactaattt 25562136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 409
Target Start/End: Complemental strand, 26101703 - 26101650
Alignment:
Q  356 tgacctatattacaggag-taaagcaccattaacccttaattataattctaattt 409  Q
    |||||||||||||||| | ||||||||||||||||||||||| |||| |||||||    
T  26101703 tgacctatattacagggggtaaagcaccattaacccttaatt-taatactaattt 26101650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 27967755 - 27967713
Alignment:
Q  251 ggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||| |||||||||||||  |||||||||||    
T  27967755 ggttaatggtgctttagcccctgtaatatagatcattttttgt 27967713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 31826470 - 31826420
Alignment:
Q  244 attatagggttaatggtgctttatcccc-tgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| |||| |||| ||||||||| ||||||||||||    
T  31826470 attatagggttaatggtgttttacccccctgtaatataggtcattttttgt 31826420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 290
Target Start/End: Complemental strand, 7313731 - 7313694
Alignment:
Q  253 ttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  7313731 ttaatggtgttttaccccctgtaatatatgtcattttt 7313694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 10790390 - 10790350
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    ||||||||||||||||| ||||||||||||| ||||||||||    
T  10790390 gggttaatggtgcttta-cccctgtaatataggtcatttttt 10790350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 13420188 - 13420229
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||||||| |||| ||||||||||||| |||||||||    
T  13420188 agggttaatggtgttttaccccctgtaatataagtcattttt 13420229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 14985367 - 14985326
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcatttt 289  Q
    |||||||||||||| |||| ||||||||||||| ||||||||    
T  14985367 tagggttaatggtgttttaccccctgtaatataagtcatttt 14985326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 29239759 - 29239718
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| || |||||||||| |||||||||    
T  29239759 agggttaatggtgctttacccactgtaatataggtcattttt 29239718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 31656366 - 31656406
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  31656366 agggttaatagtgcttta-cccctgtaatatatgtcattttt 31656406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 31826214 - 31826255
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| ||||||||||||| || ||||||    
T  31826214 agggttaatggtgctttaccccctgtaatataggtgattttt 31826255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 33225441 - 33225482
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| ||||||||||||| || ||||||    
T  33225441 agggttaatggtgctttaccccctgtaatataggttattttt 33225482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 2181604 - 2181561
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||||||||||||| || |||||||||    
T  2181604 agggttaatggtgcttta-cccctgtaatataggttattttttgt 2181561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 7998506 - 7998542
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaaccctt 392  Q
    |||| |||||||||||||||||| |||||||||||||    
T  7998506 tgacatatattacaggagtaaagtaccattaaccctt 7998542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 13462619 - 13462659
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcatttt 289  Q
    |||||||||  || |||||||||||||||||||||||||||    
T  13462619 agggttaataatgttttatcccctgtaatatatgtcatttt 13462659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 21226725 - 21226764
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcatttt 289  Q
    |||||||||||||||||| ||||||||||||| ||||||||    
T  21226725 agggttaatggtgcttta-cccctgtaatataggtcatttt 21226764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 22362995 - 22362955
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcatttt 289  Q
    ||||||||| |||||||| ||||||||||||| ||||||||    
T  22362995 agggttaatagtgctttaccccctgtaatataggtcatttt 22362955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 28038881 - 28038933
Alignment:
Q  236 tattattaattatagggttaatggtgctttatcccctgtaatatatgtcattt 288  Q
    ||||||| |||||||||||||| ||| |||   ||||||||||||||||||||    
T  28038881 tattatttattatagggttaatagtgtttttcaccctgtaatatatgtcattt 28038933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 33225643 - 33225603
Alignment:
Q  253 ttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||| |||| ||||||||||||| ||||||||||||    
T  33225643 ttaatggtgatttaccccctgtaatataggtcattttttgt 33225603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 33936481 - 33936441
Alignment:
Q  251 ggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    |||||||||||||||| |||| |||||||| ||||||||||    
T  33936481 ggttaatggtgctttaccccccgtaatataggtcatttttt 33936441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 248 - 291
Target Start/End: Complemental strand, 29936 - 29893
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcatttttt 291  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  29936 tagggttaatggtgctttaccccctgtaatataggtcatttttt 29893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 12395 - 12441
Alignment:
Q  247 atagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  12395 atagggttaatgatgctttaccccctgtaatataggtcattttttgt 12441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1797 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1797
Description:

Target: scaffold1797; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 471 - 516
Alignment:
Q  249 agggttaatggtgctttat-cccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  471 agggttaatggtgctttatccccctgtaatataggtcattttttgt 516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 6541 - 6492
Alignment:
Q  244 attatagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||| |||||||||| ||||||| ||||||||||||| ||||||||||||    
T  6541 attaaagggttaatgttgctttaccccctgtaatataggtcattttttgt 6492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 14505 - 14464
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  14505 agggttaatggtgctttaccccctgtaatataggtcattttt 14464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 149483 - 149528
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| |||||| |||||| ||||||||||||    
T  149483 tagggttaatggtgctttaccccctgaaatataggtcattttttgt 149528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 145607 - 145562
Alignment:
Q  249 agggttaatggtgctttat-cccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  145607 agggttaatggtgctttatccccctgtaatataggtcattttttgt 145562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 263197 - 263246
Alignment:
Q  244 attatagggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||| ||||| |||||||| ||||||||||||| ||||||||||||    
T  263197 attataggtttaatagtgctttaccccctgtaatataggtcattttttgt 263246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 150289 - 150242
Alignment:
Q  244 attatagggttaatggtgcttta-tcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||    
T  150289 attatagggttaatggtgctttacacccctgtaatataggtcattttt 150242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 29741 - 29697
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||||    
T  29741 agggttaatggtgttttaccccctgtaatataggtcattttttgt 29697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 32; Significance: 0.00000002; HSPs: 3)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 4357 - 4315
Alignment:
Q  250 gggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  4357 gggttaatggtgcttta-cccctgtaatataggtcattttttgt 4315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 390
Target Start/End: Original strand, 4323 - 4357
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaaccc 390  Q
    |||||||||||||||| ||||||||||||||||||    
T  4323 tgacctatattacaggggtaaagcaccattaaccc 4357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 4106 - 4066
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaacccttaatt 396  Q
    |||| ||||||||||| ||||| ||||||||||||||||||    
T  4106 tgacttatattacaggggtaaatcaccattaacccttaatt 4066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 394
Target Start/End: Original strand, 342659 - 342697
Alignment:
Q  356 tgacctatattacaggagtaaagcaccattaacccttaa 394  Q
    |||||||||||| ||| ||||||||||||||||||||||    
T  342659 tgacctatattagaggggtaaagcaccattaacccttaa 342697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 342694 - 342651
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttttgt 293  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||||    
T  342694 agggttaatggtgcttta-cccctctaatataggtcattttttgt 342651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 290
Target Start/End: Complemental strand, 53581 - 53539
Alignment:
Q  248 tagggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    ||||||||| ||||||||| ||||||||||||| |||||||||    
T  53581 tagggttaacggtgctttaccccctgtaatataggtcattttt 53539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 5484 - 5443
Alignment:
Q  249 agggttaatggtgctttatcccctgtaatatatgtcattttt 290  Q
    |||||||||||||||||| ||| ||||||||| |||||||||    
T  5484 agggttaatggtgctttaccccttgtaatataggtcattttt 5443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 5217 - 5264
Alignment:
Q  248 tagggttaatggtgctttatcccc--tgtaatatatgtcattttttgt 293  Q
    |||||||||||||| |||| ||||  ||||||||||||||||||||||    
T  5217 tagggttaatggtgttttaccccccctgtaatatatgtcattttttgt 5264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 83429 - 83473
Alignment:
Q  250 gggttaatggtgctttatcccc-tgtaatatatgtcattttttgt 293  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||||    
T  83429 gggttaatggtgctttacccccatgtaatatacgtcattttttgt 83473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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