View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6178_high_45 (Length: 343)

Name: NF6178_high_45
Description: NF6178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6178_high_45
NF6178_high_45
[»] chr5 (10 HSPs)
chr5 (20-335)||(1437577-1437892)
chr5 (31-140)||(32172653-32172762)
chr5 (31-83)||(11457154-11457207)
chr5 (31-130)||(2568667-2568767)
chr5 (35-130)||(35095751-35095847)
chr5 (43-141)||(41957424-41957522)
chr5 (32-70)||(7674718-7674756)
chr5 (31-129)||(30217092-30217190)
chr5 (41-90)||(38766516-38766566)
chr5 (31-83)||(38047840-38047893)
[»] chr6 (15 HSPs)
chr6 (161-250)||(28088529-28088618)
chr6 (53-130)||(28088206-28088283)
chr6 (162-250)||(27998720-27998808)
chr6 (264-328)||(28069682-28069746)
chr6 (252-335)||(28030025-28030108)
chr6 (31-128)||(281809-281907)
chr6 (31-124)||(2460112-2460206)
chr6 (31-83)||(769194-769247)
chr6 (31-83)||(32917253-32917306)
chr6 (284-336)||(28014329-28014381)
chr6 (257-328)||(27910031-27910102)
chr6 (32-70)||(26559201-26559239)
chr6 (161-242)||(28069564-28069645)
chr6 (31-130)||(2455819-2455919)
chr6 (31-130)||(32975987-32976087)
[»] chr3 (8 HSPs)
chr3 (34-130)||(37273143-37273240)
chr3 (31-130)||(43115065-43115165)
chr3 (37-84)||(2923533-2923581)
chr3 (60-125)||(36200110-36200176)
chr3 (35-131)||(21574498-21574595)
chr3 (74-130)||(23785264-23785320)
chr3 (31-130)||(26542546-26542646)
chr3 (51-90)||(41724261-41724301)
[»] chr2 (8 HSPs)
chr2 (31-140)||(36415635-36415743)
chr2 (31-130)||(7283005-7283105)
chr2 (53-131)||(34652019-34652098)
chr2 (31-84)||(5759536-5759589)
chr2 (31-123)||(41809206-41809299)
chr2 (38-90)||(44606078-44606131)
chr2 (31-82)||(5902510-5902562)
chr2 (35-90)||(9878647-9878703)
[»] chr4 (5 HSPs)
chr4 (32-130)||(23819098-23819197)
chr4 (31-124)||(27123313-27123407)
chr4 (31-130)||(4798527-4798627)
chr4 (54-130)||(53673642-53673719)
chr4 (32-131)||(19304934-19305034)
[»] chr1 (7 HSPs)
chr1 (58-140)||(27140478-27140560)
chr1 (31-128)||(32515402-32515500)
chr1 (50-125)||(28689432-28689508)
chr1 (31-138)||(35080031-35080138)
chr1 (31-92)||(38578575-38578637)
chr1 (94-130)||(8130445-8130481)
chr1 (31-130)||(17420212-17420312)
[»] chr7 (4 HSPs)
chr7 (31-130)||(33645921-33646021)
chr7 (29-70)||(6633934-6633975)
chr7 (31-82)||(29574586-29574638)
chr7 (31-90)||(36537957-36538017)
[»] chr8 (5 HSPs)
chr8 (55-130)||(25869251-25869327)
chr8 (31-129)||(13000385-13000484)
chr8 (31-140)||(11569418-11569527)
chr8 (31-71)||(2487969-2488009)
chr8 (31-130)||(7714251-7714351)
[»] scaffold0110 (1 HSPs)
scaffold0110 (54-140)||(4207-4293)
[»] scaffold0147 (1 HSPs)
scaffold0147 (53-140)||(12687-12775)


Alignment Details
Target: chr5 (Bit Score: 296; Significance: 1e-166; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 20 - 335
Target Start/End: Original strand, 1437577 - 1437892
Alignment:
Q  20 ctcctccactgcttgtgagactgtttggatgaacttatggaaacaacttatacatgtccataagtcgttttgatcttgtttccatgagctttccatgata 119  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1437577 ctcctacactgcttgtgagactgtttggacgaacttatggaaacaacttatacatgtccataagtcgttttgatcttgtttccatgagctttccatgata 1437676  T
Q  120 gcttatgaaaaacagcttataatgctaaccaatgttttgagcttcttgcagagggttaaccaatgtttgtgtgatgcctgccgtaatgctaatctaacta 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  1437677 gcttatgaaaaacagcttataatgctaaccaatgttttgagcttcttgcagagggttaaccaatgtttgcgtgatgcctgccgtaatgctaatctaactg 1437776  T
Q  220 gatgcatggaattgattgattgtaattctaatgctacatggaggaatgataagggtgccaatgattgtttgaattcctcatctggtgttttttcttatgg 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1437777 gatgcatggaattgattgattgtaattctaatgctacatggaggaatgataagggtgccaatgattgtttgaattcctcatctggtgttttttcttatgg 1437876  T
Q  320 aatctatgcctatgct 335  Q
    |||||||||| |||||    
T  1437877 aatctatgccaatgct 1437892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 140
Target Start/End: Complemental strand, 32172762 - 32172653
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaa 129  Q
    |||||||||  ||||||  || |||||||||||||||||| ||||||||||||| | |||| | ||| ||||||| || | | |||||||||||||| ||    
T  32172762 cttgtgagatagtttgggagagcttatggaaacaacttatgacatgtccataagccattttcagcttatttccattagttcttcatgatagcttatg-aa 32172664  T
Q  130 aacagcttata 140  Q
    |||||||||||    
T  32172663 aacagcttata 32172653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 11457207 - 11457154
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataag 83  Q
    ||||||||||||||| || || |||||||||||||||||| |||||||||||||    
T  11457207 cttgtgagactgttttgaagagcttatggaaacaacttatgacatgtccataag 11457154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 2568767 - 2568667
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaa 129  Q
    |||| |||||||||| || ||||||||| ||||| ||||| |||| | |||||||  |||| | ||| ||| ||| |||| |||||||||||||||||||    
T  2568767 cttgagagactgtttagaagaacttatgaaaacagcttatgacatattcataagttatttttagcttattttcattagctctccatgatagcttatgaaa 2568668  T
Q  130 a 130  Q
    |    
T  2568667 a 2568667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 35095751 - 35095847
Alignment:
Q  35 tgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaaa 130  Q
    |||||||||||||| || |||||||||| | ||||| |||||| |||| | |||||| | ||| ||||||| |||||| || ||||||| |||||||    
T  35095751 tgagactgtttggaagagcttatggaaatatcttatgacatgtacatatgccgttttcaacttatttccataagctttacaagatagctcatgaaaa 35095847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 141
Target Start/End: Original strand, 41957424 - 41957522
Alignment:
Q  43 tttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaaaacagcttataa 141  Q
    |||||| || |||| ||||||| ||||| |||||||||||||| ||||| ||||| ||| ||| || | || | ||||||||||| ||||||||||||||    
T  41957424 tttggaagagcttacggaaacagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatg-aaaacagcttataa 41957522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 7674756 - 7674718
Alignment:
Q  32 ttgtgagactgtttggatgaacttatggaaacaacttat 70  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  7674756 ttgtgagactgcttggaagaacttatggaaacaacttat 7674718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 30217190 - 30217092
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttatacatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaa 129  Q
    ||||||||||||||| |  || |||||||||  | ||||| ||||||||||||| |||||    || ||||||| |||| |||| ||||||||||||||    
T  30217190 cttgtgagactgtttaggagagcttatggaattatcttatgcatgtccataagttgttttaggtttatttccataagctctccaggatagcttatgaaa 30217092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 38766516 - 38766566
Alignment:
Q  41 tgtttggatgaacttatggaaacaacttat-acatgtccataagtcgtttt 90  Q
    |||||||| ||||||||||||||||||||| ||| |||||||||| |||||    
T  38766516 tgtttggaagaacttatggaaacaacttatgacacgtccataagttgtttt 38766566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 38047840 - 38047893
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataag 83  Q
    |||||| ||||||||||  || |||||||||||||||||| |||||||||||||    
T  38047840 cttgtgtgactgtttgggagagcttatggaaacaacttatgacatgtccataag 38047893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 161 - 250
Target Start/End: Original strand, 28088529 - 28088618
Alignment:
Q  161 cttcttgcagagggttaaccaatgtttgtgtgatgcctgccgtaatgctaatctaactagatgcatggaattgattgattgtaattctaa 250  Q
    |||||| ||||||||||||||||||||| |||||||||||| ||||||||| |||  | |||||||||||||||||||||||||||||||    
T  28088529 cttcttccagagggttaaccaatgtttgcgtgatgcctgccataatgctaaactacttggatgcatggaattgattgattgtaattctaa 28088618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 28088206 - 28088283
Alignment:
Q  53 cttatggaaacaacttatacatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaaa 130  Q
    ||||||||||||||||||||||||| ||| || ||||||| ||| |||||||||||| ||||||||||||||||||||    
T  28088206 cttatggaaacaacttatacatgtctataggttgttttgagcttatttccatgagctctccatgatagcttatgaaaa 28088283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 27998720 - 27998808
Alignment:
Q  162 ttcttgcagagggttaaccaatgtttgtgtgatgcctgccgtaatgctaatctaactagatgcatggaattgattgattgtaattctaa 250  Q
    ||||| ||||||||||||||||||||| | |||||||||| | || ||||||||  | |||||||||| |||||||||||| |||||||    
T  27998720 ttcttccagagggttaaccaatgtttgcgagatgcctgccatcattctaatctacttggatgcatggacttgattgattgtgattctaa 27998808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 264 - 328
Target Start/End: Original strand, 28069682 - 28069746
Alignment:
Q  264 aatgataagggtgccaatgattgtttgaattcctcatctggtgttttttcttatggaatctatgc 328  Q
    ||||||||||||||||||| |||||| ||  || ||||||||| |||||||||||||||||||||    
T  28069682 aatgataagggtgccaatgcttgtttaaacgccacatctggtgctttttcttatggaatctatgc 28069746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 335
Target Start/End: Original strand, 28030025 - 28030108
Alignment:
Q  252 gctacatggaggaatgataagggtgccaatgattgtttgaattcctcatctggtgttttttcttatggaatctatgcctatgct 335  Q
    |||||||||||  |||||||||||||| ||| ||||||||||||| ||||||||| | ||  ||||||||| |||||| |||||    
T  28030025 gctacatggagtgatgataagggtgccgatgcttgtttgaattccacatctggtgctattaattatggaatatatgccaatgct 28030108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 281809 - 281907
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaa 128  Q
    |||||||||||||||||  || || |||||| |||||||| ||||||| |||||| ||||| | ||| |||||||||||| || | |||||||||||||    
T  281809 cttgtgagactgtttgggagagctaatggaagcaacttatgacatgtctataagttgttttcagcttatttccatgagctctctaggatagcttatgaa 281907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 2460112 - 2460206
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagctta 124  Q
    ||||||||||||||||   || |||||||||||||||||| |||||||  ||||| ||||| | ||| ||||||| |||| ||||| ||||||||    
T  2460112 cttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctctccataatagctta 2460206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 769247 - 769194
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataag 83  Q
    |||||||||||||||||||||||||||| ||||| ||||| |||||| ||||||    
T  769247 cttgtgagactgtttggatgaacttatgaaaacatcttatgacatgttcataag 769194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 32917306 - 32917253
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataag 83  Q
    |||||||||||||||||  || |||||||||||||||||| |||||||||||||    
T  32917306 cttgtgagactgtttgggagagcttatggaaacaacttatgacatgtccataag 32917253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 28014329 - 28014381
Alignment:
Q  284 ttgtttgaattcctcatctggtgttttttcttatggaatctatgcctatgcta 336  Q
    |||| ||||| || ||||||||| |||||||||||||||||||||| ||||||    
T  28014329 ttgtatgaatgccacatctggtgctttttcttatggaatctatgccaatgcta 28014381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 27910031 - 27910102
Alignment:
Q  257 atggaggaatgataagggtgccaatgattgtttgaattcctcatctggtgttttttcttatggaatctatgc 328  Q
    |||||| || |||||||||||  ||| |||||| ||  || ||||||||| |||||||||||||||||||||    
T  27910031 atggagtaaagataagggtgctgatgcttgtttaaacgccacatctggtgctttttcttatggaatctatgc 27910102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 26559201 - 26559239
Alignment:
Q  32 ttgtgagactgtttggatgaacttatggaaacaacttat 70  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  26559201 ttgtgagactgtttggaagaacttatgaaaacaacttat 26559239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 242
Target Start/End: Original strand, 28069564 - 28069645
Alignment:
Q  161 cttcttgcagagggttaaccaatgtttgtgtgatgcctgccgtaatgctaatctaactagatgcatggaattgattgattgt 242  Q
    |||||| |||||||||||||||||||||   |||||||||| |  | | ||| || || |||||||||| ||||||||||||    
T  28069564 cttcttccagagggttaaccaatgtttgcaagatgcctgccatcgttcgaatttacctggatgcatggacttgattgattgt 28069645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 2455919 - 2455819
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaa 129  Q
    |||| |||| ||||| || || |||||||||||||||||| ||||| ||||||    |||| | ||| ||||||| |||| |||| ||||||||||||||    
T  2455919 cttgcgagattgtttagaagagcttatggaaacaacttatgacatgcccataaactattttcaacttatttccataagctctccaagatagcttatgaaa 2455820  T
Q  130 a 130  Q
    |    
T  2455819 a 2455819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 32976087 - 32975987
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaa 129  Q
    |||||||||||||||||| || ||||| |||||| ||||| |||| ||||||||  ||||| | | || ||| || | | ||||| ||||||||||||||    
T  32976087 cttgtgagactgtttggaagagcttatagaaacagcttatgacatttccataagctgttttcagcgtgcttctataatcattccaggatagcttatgaaa 32975988  T
Q  130 a 130  Q
    |    
T  32975987 a 32975987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 37273240 - 37273143
Alignment:
Q  34 gtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaaa 130  Q
    ||||||||||||||  || |||||||||||||||||| |||||||||||||| ||||| | ||| ||||||| || | |||| |||||||||||||||    
T  37273240 gtgagactgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaa 37273143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 43115165 - 43115065
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaa 129  Q
    ||||||||| |||||||| ||  ||||||||||||||||| |||||||||||| | ||||| | ||| ||||||| |||| || ||||||| | ||||||    
T  43115165 cttgtgagattgtttggaagagtttatggaaacaacttatgacatgtccataacttgttttcagcttatttccataagctctcaatgatagttcatgaaa 43115066  T
Q  130 a 130  Q
    |    
T  43115065 a 43115065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 2923581 - 2923533
Alignment:
Q  37 agactgtttggatgaacttatggaaacaactta-tacatgtccataagt 84  Q
    |||||||||||| |||||||| ||||||||||| |||||||||||||||    
T  2923581 agactgtttggaagaacttatagaaacaacttactacatgtccataagt 2923533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 36200176 - 36200110
Alignment:
Q  60 aaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttat 125  Q
    ||||||||||| |||||||||||||| ||||| | ||| |||||||||||| | || ||||||||||    
T  36200176 aaacaacttatgacatgtccataagttgttttcagcttatttccatgagctctacaggatagcttat 36200110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 21574595 - 21574498
Alignment:
Q  35 tgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaaaa 131  Q
    |||||||||||||  || |||||| ||||||||||| |||||| ||||||  | ||| | ||| ||||||| |||| |||||| |||||||| |||||    
T  21574595 tgagactgtttgggagagcttatgaaaacaacttatgacatgttcataagctgcttttagcttatttccataagctctccatgttagcttataaaaaa 21574498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 23785320 - 23785264
Alignment:
Q  74 tgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaaa 130  Q
    ||||||||||| ||||| | ||||||||||| |||| ||||||| ||||| ||||||    
T  23785320 tgtccataagttgttttcagcttgtttccataagctctccatgagagcttgtgaaaa 23785264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 26542646 - 26542546
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaa 129  Q
    ||||| |||||||||||| || ||||  |||||||||||| | ||||| |||| | ||||| | ||| ||||||| | || ||||| |||||||||||||    
T  26542646 cttgtaagactgtttggaagagcttactgaaacaacttatgatatgtctataacttgttttcaacttatttccataaactctccataatagcttatgaaa 26542547  T
Q  130 a 130  Q
    |    
T  26542546 a 26542546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 41724301 - 41724261
Alignment:
Q  51 aacttatggaaacaacttat-acatgtccataagtcgtttt 90  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  41724301 aacttatggaaacaacttatgacatgtccataagttgtttt 41724261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 140
Target Start/End: Original strand, 36415635 - 36415743
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttatacatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaaa 130  Q
    ||||||| | |||||||  |||||||| |||||||||||||||||| ||||||| ||||| ||||| ||| | | || | | |||||||||||||| |||    
T  36415635 cttgtgacattgtttgggagaacttatagaaacaacttatacatgtgcataagttgttttcatcttattttcgtaagttctacatgatagcttatg-aaa 36415733  T
Q  131 acagcttata 140  Q
    ||||||||||    
T  36415734 acagcttata 36415743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 7283105 - 7283005
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaa 129  Q
    ||||||||||| ||||||| | ||| |||||||||||||| | |||||||||||| ||||| ||||| | ||||| |||| |||   |||||||||||||    
T  7283105 cttgtgagactatttggattagcttttggaaacaacttatgatatgtccataagttgttttcatcttatatccataagctctcccacatagcttatgaaa 7283006  T
Q  130 a 130  Q
    |    
T  7283005 a 7283005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 131
Target Start/End: Original strand, 34652019 - 34652098
Alignment:
Q  53 cttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaaaa 131  Q
    ||||| |||||||||||| |||||||||||||  ||||| | ||| ||||||| |||| |||| ||||||||||||||||    
T  34652019 cttatagaaacaacttatgacatgtccataagctgttttcaacttatttccataagctctccaagatagcttatgaaaaa 34652098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 5759536 - 5759589
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttatacatgtccataagt 84  Q
    |||||||||||||||||  || |||||||||||| |||| ||||||||||||||    
T  5759536 cttgtgagactgtttgggagagcttatggaaacagcttagacatgtccataagt 5759589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 41809206 - 41809299
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagctt 123  Q
    |||||||||||| ||| | || ||| |||||||||||||| |||||| ||||||| ||||| | ||| ||||||| ||||||| | ||||||||    
T  41809206 cttgtgagactgattgtaagagcttgtggaaacaacttatgacatgttcataagttgtttttagcttatttccataagctttctaagatagctt 41809299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 44606078 - 44606131
Alignment:
Q  38 gactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgtttt 90  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||| |||||    
T  44606078 gactgtttggaagaacttatgaaaacaacttatgacatgtccataagttgtttt 44606131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 5902510 - 5902562
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataa 82  Q
    |||||||||||||||||| ||||||||| ||||| ||||| |||||| |||||    
T  5902510 cttgtgagactgtttggaagaacttatgaaaacagcttatgacatgttcataa 5902562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 9878647 - 9878703
Alignment:
Q  35 tgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgtttt 90  Q
    |||||||||  ||| || |||||||||||||||||| |||||||||||||| |||||    
T  9878647 tgagactgtagggaagagcttatggaaacaacttatgacatgtccataagttgtttt 9878703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 23819197 - 23819098
Alignment:
Q  32 ttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaaa 130  Q
    ||||||||||||||||| ||  ||| | ||||| ||||| |||||||||||||| ||||| ||||| |||| || |||| | || |||||||||||||||    
T  23819197 ttgtgagactgtttggaagagtttaagaaaacagcttatgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttatgaaaa 23819098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 27123313 - 27123407
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagctta 124  Q
    ||||||||||||||||   || |||||||||||||||||| |||||||  ||||| ||||| | ||| ||||||| |||| ||||| ||||||||    
T  27123313 cttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctctccataatagctta 27123407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 4798527 - 4798627
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaa 129  Q
    |||||||||||||| ||| || |||||||||||  ||| | |||||| ||||||  ||||||| ||| ||| ||| |||| |||| ||||||||||||||    
T  4798527 cttgtgagactgttaggaagagcttatggaaacggcttctgacatgtacataagctgttttgagcttatttgcataagctctccaagatagcttatgaaa 4798626  T
Q  130 a 130  Q
    |    
T  4798627 a 4798627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 53673642 - 53673719
Alignment:
Q  54 ttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaaa 130  Q
    ||||||||||||| ||| | |||||||||||| ||||| | ||| ||| ||| |||| |||| |||||||||||||||    
T  53673642 ttatggaaacaacatatcatatgtccataagttgttttcagcttatttacataagctctccaagatagcttatgaaaa 53673719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 19305034 - 19304934
Alignment:
Q  32 ttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaaa 130  Q
    |||||||| ||| |||  ||| || |||||||| ||||| |||||||||||||| ||||| | ||||||||||| | || ||||  ||||||||| ||||    
T  19305034 ttgtgagattgtgtgggagaatttgtggaaacagcttatgacatgtccataagttgttttcagcttgtttccattaactctccaaaatagcttataaaaa 19304935  T
Q  131 a 131  Q
    |    
T  19304934 a 19304934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 27140560 - 27140478
Alignment:
Q  58 ggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaaaacagcttata 140  Q
    ||||||| ||||| |||||||||||||| ||||| | ||| ||| ||| |||| ||||||||||||||| ||||||||||||||    
T  27140560 ggaaacagcttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttat-aaaaacagcttata 27140478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 32515402 - 32515500
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaa 128  Q
    |||||||||||||||||  || |||||||||||| | ||| ||||||| |||||| ||||| | ||| | || || |||| ||||||||||||||||||    
T  32515402 cttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtcaataagttgttttcaacttatatctataagctctccatgatagcttatgaa 32515500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 28689432 - 28689508
Alignment:
Q  50 gaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttat 125  Q
    ||||||| ||||||| ||||| |||||||||||||| ||||| | ||| ||| ||| ||||||||| ||||||||||    
T  28689432 gaacttacggaaacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttat 28689508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 138
Target Start/End: Original strand, 35080031 - 35080138
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaa 129  Q
    ||||||||||| ||||||  | ||||||||| |||||||| |||||| ||||||  ||||||| ||| |||| |  |||| |||||||||||| ||||||    
T  35080031 cttgtgagactctttggaaaagcttatggaa-caacttatgacatgttcataagctgttttgagcttatttcgacaagctctccatgatagctcatgaaa 35080129  T
Q  130 aacagctta 138  Q
    || ||||||    
T  35080130 aaaagctta 35080138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 38578637 - 38578575
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttga 92  Q
    ||||||||||||||||||  |||||||| ||||||||||| |||| | ||||||| |||||||    
T  38578637 cttgtgagactgtttggactaacttatgaaaacaacttataacatattcataagttgttttga 38578575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 8130481 - 8130445
Alignment:
Q  94 cttgtttccatgagctttccatgatagcttatgaaaa 130  Q
    ||||||||||| || ||||||||||||||||||||||    
T  8130481 cttgtttccataagttttccatgatagcttatgaaaa 8130445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 17420312 - 17420212
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaactta-tacatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaa 129  Q
    ||||| ||||||||| || || |||||| |||||||||| ||||||||||||| | ||||| | ||| ||||||| || ||||   ||||||||| ||||    
T  17420312 cttgttagactgttttgaagagcttatgaaaacaacttattacatgtccataaattgttttcaacttatttccattagttttctgagatagcttacgaaa 17420213  T
Q  130 a 130  Q
    |    
T  17420212 a 17420212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 33645921 - 33646021
Alignment:
Q  31 cttgtgagactgtttggat-gaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaa 128  Q
    |||||||||||| |||||  || |||||||||||||||||| ||||||| |||||| ||||| |  || ||||||| |||| |||| |||||||||||||    
T  33645921 cttgtgagactggttggagagagcttatggaaacaacttatgacatgtctataagttgtttttaggttatttccataagctctcca-gatagcttatgaa 33646019  T
Q  129 aa 130  Q
    ||    
T  33646020 aa 33646021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 6633975 - 6633934
Alignment:
Q  29 tgcttgtgagactgtttggatgaacttatggaaacaacttat 70  Q
    ||||||||||||||| |||| ||| |||||||||||||||||    
T  6633975 tgcttgtgagactgtatggaagaatttatggaaacaacttat 6633934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 29574586 - 29574638
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataa 82  Q
    ||||||||||||||| |  ||||||||||||||| ||||| ||||||||||||    
T  29574586 cttgtgagactgtttcggagaacttatggaaacagcttatgacatgtccataa 29574638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 36538017 - 36537957
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgtttt 90  Q
    ||||||||| ||||||   ||||||||||||||||||||| |||||| ||||||| |||||    
T  36538017 cttgtgagattgtttgagagaacttatggaaacaacttatgacatgttcataagttgtttt 36537957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 130
Target Start/End: Original strand, 25869251 - 25869327
Alignment:
Q  55 tatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaaa 130  Q
    |||||||| ||||||| |||||||||||||| ||||| | ||| ||||||| | || ||||||||||| ||||||||    
T  25869251 tatggaaataacttatgacatgtccataagttgttttcagcttatttccataaactctccatgatagcctatgaaaa 25869327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 129
Target Start/End: Original strand, 13000385 - 13000484
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaa 129  Q
    ||||||||||| |||| | ||  |||||| |||||||||| ||||||||| |||| ||||| | ||| ||||||| |||||| ||||| || ||||||||    
T  13000385 cttgtgagactatttgcaagagtttatggtaacaacttatgacatgtccacaagttgttttcagcttatttccataagctttgcatgacagtttatgaaa 13000484  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 140
Target Start/End: Original strand, 11569418 - 11569527
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaa 129  Q
    |||||||||||||||    || |||||||||||| ||||| |||||| ||||||| ||||| | ||| ||| ||  | || |||||||||||||||| ||    
T  11569418 cttgtgagactgtttaagagagcttatggaaacagcttatgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagcttatg-aa 11569516  T
Q  130 aacagcttata 140  Q
    |||||||||||    
T  11569517 aacagcttata 11569527  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 2487969 - 2488009
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttata 71  Q
    |||||||||||||||||  ||||||||| ||||||||||||    
T  2487969 cttgtgagactgtttgggagaacttatgaaaacaacttata 2488009  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 7714351 - 7714251
Alignment:
Q  31 cttgtgagactgtttggatgaacttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaa 129  Q
    ||||||||||||||||||  | ||| |||||||||||||| | ||||| || ||  ||||| | ||| ||| |||||||| |||| ||||||| ||||||    
T  7714351 cttgtgagactgtttggaaaagcttgtggaaacaacttatgaaatgtcgatgagctgttttcaacttattttcatgagctctccaagatagctcatgaaa 7714252  T
Q  130 a 130  Q
    |    
T  7714251 a 7714251  T

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Target: scaffold0110 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 140
Target Start/End: Original strand, 4207 - 4293
Alignment:
Q  54 ttatggaaacaacttatacat-gtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaaaacagcttata 140  Q
    ||||||||||||||||| ||| ||| |||||| ||||| ||||||||||| | ||||||| |  |||||||||  |||||||||||||    
T  4207 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccgtaagctttctagcatagcttat-taaaacagcttata 4293  T

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Target: scaffold0147 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 12687 - 12775
Alignment:
Q  53 cttatggaaacaacttat-acatgtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaaaacagcttata 140  Q
    |||||||||||||||||| |||||||||||||| ||||| | |||   ||||| |||| || | |||||||| |  |||||||||||||    
T  12687 cttatggaaacaacttatgacatgtccataagttgttttcagcttagctccataagctctctaagatagcttcttgaaaacagcttata 12775  T

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