View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6178_high_86 (Length: 223)
Name: NF6178_high_86
Description: NF6178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6178_high_86 |
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Alignment Details
Target: chr3 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 16 - 205
Target Start/End: Original strand, 50205682 - 50205871
Alignment:
| Q |
16 |
caataagattgcgggaagtctggcgcctggatcgtgatctcctggtgactcgagcaataacagtagcttcctctttagaaatatgtttaaggcgcttctc |
115 |
Q |
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| T |
50205682 |
caataagattgcgggaagtctggcgcctggatcgtgatctcctggtgactcgagcaataacagtagcttcctctttagaaatatgtttaaggcgcttctc |
50205781 |
T |
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| Q |
116 |
aaaatcatcgccgtgtaacctaaaaatcccattccaaattcgggaaatgaatcctttgcgcttcttctttacattcccagaagcagtagc |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50205782 |
aaaatcatcgccgtgtaacctaaaaatcccattccaaattcgggaaatgaatcctttgcgcttcttctttacattcccagaagcagtagc |
50205871 |
T |
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