View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6178_low_24 (Length: 417)

Name: NF6178_low_24
Description: NF6178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6178_low_24
NF6178_low_24
[»] chr4 (61 HSPs)
chr4 (195-400)||(32689831-32690035)
chr4 (1-129)||(32690101-32690229)
chr4 (1-109)||(54854153-54854261)
chr4 (6-109)||(49039424-49039527)
chr4 (5-115)||(12585537-12585647)
chr4 (1-124)||(6202601-6202724)
chr4 (4-111)||(9062187-9062297)
chr4 (16-109)||(1589147-1589239)
chr4 (1-123)||(20166315-20166437)
chr4 (3-109)||(20610752-20610858)
chr4 (1-69)||(33359870-33359938)
chr4 (3-69)||(10098178-10098242)
chr4 (2-69)||(32887184-32887251)
chr4 (34-109)||(49319406-49319481)
chr4 (20-121)||(18497392-18497494)
chr4 (1-123)||(30116507-30116628)
chr4 (3-69)||(35230271-35230337)
chr4 (8-96)||(3465609-3465695)
chr4 (3-99)||(36045853-36045949)
chr4 (42-110)||(41003187-41003255)
chr4 (43-100)||(55967600-55967657)
chr4 (38-86)||(6637733-6637781)
chr4 (38-109)||(9084771-9084843)
chr4 (1-109)||(23226679-23226787)
chr4 (42-109)||(48512211-48512279)
chr4 (1-109)||(49743375-49743483)
chr4 (42-109)||(53815708-53815776)
chr4 (1-69)||(55677158-55677226)
chr4 (38-69)||(11491230-11491261)
chr4 (1-108)||(15185092-15185199)
chr4 (38-69)||(27862842-27862873)
chr4 (38-69)||(29269326-29269357)
chr4 (34-69)||(29785203-29785238)
chr4 (38-69)||(37274633-37274664)
chr4 (38-69)||(40406971-40407002)
chr4 (38-69)||(43362179-43362210)
chr4 (38-69)||(45847937-45847968)
chr4 (38-69)||(46283175-46283206)
chr4 (42-96)||(8690240-8690294)
chr4 (1-109)||(31480283-31480390)
chr4 (42-96)||(32885714-32885768)
chr4 (7-69)||(36257747-36257807)
chr4 (42-96)||(37032194-37032248)
chr4 (38-96)||(44374090-44374148)
chr4 (1-86)||(15507582-15507667)
chr4 (34-114)||(18740923-18741004)
chr4 (16-69)||(21023341-21023394)
chr4 (1-69)||(30203306-30203375)
chr4 (42-99)||(33076553-33076610)
chr4 (1-109)||(37997820-37997928)
chr4 (42-99)||(44272959-44273016)
chr4 (42-95)||(45350303-45350356)
chr4 (42-95)||(45359782-45359835)
chr4 (1-129)||(4419660-4419788)
chr4 (42-86)||(12856220-12856264)
chr4 (42-109)||(14149805-14149873)
chr4 (17-69)||(24039937-24039989)
chr4 (38-66)||(24234085-24234113)
chr4 (42-109)||(28520746-28520814)
chr4 (42-109)||(36954149-36954217)
chr4 (42-109)||(48968225-48968293)
[»] chr7 (42 HSPs)
chr7 (1-109)||(10020443-10020551)
chr7 (4-108)||(32309125-32309229)
chr7 (1-99)||(11808061-11808160)
chr7 (1-115)||(43635595-43635709)
chr7 (43-115)||(23799307-23799379)
chr7 (41-109)||(32814840-32814908)
chr7 (3-115)||(35498405-35498516)
chr7 (4-98)||(24579263-24579357)
chr7 (1-107)||(7392280-7392386)
chr7 (1-115)||(43712287-43712401)
chr7 (1-69)||(17997714-17997780)
chr7 (16-109)||(19924780-19924873)
chr7 (1-74)||(23470475-23470548)
chr7 (34-115)||(24427370-24427451)
chr7 (1-69)||(33202530-33202596)
chr7 (42-86)||(14707328-14707372)
chr7 (1-69)||(41000813-41000881)
chr7 (34-109)||(1513500-1513575)
chr7 (38-69)||(3889811-3889842)
chr7 (46-109)||(7465479-7465542)
chr7 (3-69)||(29658250-29658314)
chr7 (38-69)||(31793521-31793552)
chr7 (34-109)||(35195856-35195931)
chr7 (8-99)||(37410462-37410553)
chr7 (38-69)||(40273874-40273905)
chr7 (3-69)||(1649205-1649271)
chr7 (3-69)||(3955021-3955087)
chr7 (7-69)||(10958086-10958148)
chr7 (42-96)||(38792238-38792292)
chr7 (1-115)||(44409208-44409321)
chr7 (17-123)||(48174966-48175071)
chr7 (8-69)||(2567813-2567874)
chr7 (24-61)||(19687282-19687319)
chr7 (1-69)||(47552266-47552332)
chr7 (9-69)||(8903777-8903837)
chr7 (42-109)||(21285368-21285436)
chr7 (13-69)||(21877658-21877714)
chr7 (33-69)||(27454064-27454100)
chr7 (42-109)||(31475855-31475923)
chr7 (38-86)||(33555105-33555153)
chr7 (32-96)||(45217555-45217619)
chr7 (42-86)||(48525613-48525657)
[»] chr6 (39 HSPs)
chr6 (17-109)||(30833030-30833122)
chr6 (1-121)||(4844144-4844264)
chr6 (5-128)||(30668162-30668285)
chr6 (1-69)||(26669633-26669701)
chr6 (8-109)||(10455755-10455857)
chr6 (1-124)||(3029964-3030088)
chr6 (16-115)||(22730690-22730790)
chr6 (16-109)||(8309177-8309271)
chr6 (3-96)||(12127887-12127978)
chr6 (1-109)||(9031779-9031888)
chr6 (16-69)||(9051280-9051333)
chr6 (16-69)||(24256969-24257022)
chr6 (16-109)||(34524888-34524981)
chr6 (8-96)||(35190789-35190875)
chr6 (1-96)||(9438328-9438421)
chr6 (1-96)||(22389726-22389819)
chr6 (1-69)||(34675780-34675848)
chr6 (38-69)||(3448405-3448436)
chr6 (38-69)||(4854317-4854348)
chr6 (38-69)||(6228271-6228302)
chr6 (38-69)||(18903378-18903409)
chr6 (38-69)||(20415573-20415604)
chr6 (44-115)||(20858400-20858471)
chr6 (38-69)||(22983633-22983664)
chr6 (38-69)||(23804744-23804775)
chr6 (40-99)||(25064682-25064741)
chr6 (42-96)||(11636689-11636743)
chr6 (42-96)||(12089123-12089177)
chr6 (1-115)||(32394032-32394145)
chr6 (1-69)||(6455506-6455574)
chr6 (1-65)||(6530180-6530242)
chr6 (17-86)||(7234001-7234070)
chr6 (20-69)||(19680241-19680290)
chr6 (1-69)||(20149953-20150022)
chr6 (1-69)||(22182810-22182879)
chr6 (1-69)||(6658519-6658585)
chr6 (1-65)||(10828360-10828424)
chr6 (1-96)||(30566084-30566177)
chr6 (33-85)||(32344676-32344728)
[»] chr2 (29 HSPs)
chr2 (1-109)||(20942083-20942191)
chr2 (1-129)||(39118386-39118514)
chr2 (8-109)||(1244582-1244683)
chr2 (1-109)||(34107287-34107395)
chr2 (1-115)||(39334855-39334969)
chr2 (1-115)||(40471160-40471273)
chr2 (1-67)||(35352378-35352444)
chr2 (38-86)||(25783225-25783273)
chr2 (1-96)||(32891307-32891400)
chr2 (1-112)||(12206508-12206619)
chr2 (42-96)||(9520834-9520888)
chr2 (38-96)||(9796923-9796981)
chr2 (44-86)||(16973944-16973986)
chr2 (38-96)||(19052622-19052680)
chr2 (38-96)||(25731960-25732018)
chr2 (1-99)||(36413783-36413881)
chr2 (4-66)||(42507344-42507406)
chr2 (16-109)||(14307683-14307776)
chr2 (12-109)||(22355096-22355193)
chr2 (1-96)||(29664629-29664722)
chr2 (38-69)||(3330212-3330243)
chr2 (10-96)||(17239927-17240011)
chr2 (38-69)||(42678335-42678366)
chr2 (16-108)||(10602019-10602112)
chr2 (42-96)||(11133102-11133156)
chr2 (38-96)||(32891625-32891683)
chr2 (42-96)||(44422133-44422187)
chr2 (42-99)||(4529778-4529835)
chr2 (47-96)||(16261358-16261407)
[»] chr3 (47 HSPs)
chr3 (34-109)||(34407097-34407172)
chr3 (3-129)||(24160504-24160630)
chr3 (21-128)||(28951860-28951967)
chr3 (6-125)||(42665904-42666023)
chr3 (1-115)||(24130566-24130680)
chr3 (15-109)||(51017803-51017896)
chr3 (1-108)||(16999942-17000049)
chr3 (1-96)||(36331702-36331795)
chr3 (4-107)||(40160750-40160853)
chr3 (1-96)||(50724393-50724486)
chr3 (1-96)||(50788362-50788455)
chr3 (42-96)||(14417894-14417948)
chr3 (1-115)||(33533210-33533324)
chr3 (1-98)||(4478342-4478439)
chr3 (8-69)||(21248971-21249032)
chr3 (34-115)||(31108767-31108848)
chr3 (38-83)||(47864675-47864720)
chr3 (4-112)||(2903718-2903826)
chr3 (1-128)||(3461697-3461825)
chr3 (21-109)||(4045628-4045716)
chr3 (42-86)||(27066646-27066690)
chr3 (3-62)||(36763491-36763551)
chr3 (42-109)||(47191385-47191453)
chr3 (14-96)||(23820655-23820735)
chr3 (38-69)||(27471557-27471588)
chr3 (38-69)||(29645838-29645869)
chr3 (18-69)||(32080108-32080159)
chr3 (42-85)||(45431664-45431707)
chr3 (42-96)||(362969-363023)
chr3 (38-96)||(13616085-13616143)
chr3 (42-96)||(33206783-33206837)
chr3 (42-123)||(43774183-43774265)
chr3 (42-96)||(49146110-49146164)
chr3 (51-129)||(53670351-53670429)
chr3 (16-69)||(3955361-3955412)
chr3 (20-69)||(19137672-19137721)
chr3 (44-85)||(28054746-28054787)
chr3 (44-85)||(28065171-28065212)
chr3 (24-69)||(55318070-55318115)
chr3 (42-109)||(9624995-9625063)
chr3 (44-96)||(13539981-13540033)
chr3 (21-69)||(17262272-17262320)
chr3 (42-86)||(24559425-24559469)
chr3 (42-109)||(27183696-27183764)
chr3 (1-69)||(40956661-40956729)
chr3 (18-66)||(42935476-42935524)
chr3 (38-86)||(50381750-50381798)
[»] chr1 (51 HSPs)
chr1 (1-108)||(43020625-43020732)
chr1 (19-109)||(9768801-9768891)
chr1 (3-115)||(2903003-2903115)
chr1 (1-97)||(23973456-23973552)
chr1 (16-109)||(3341725-3341818)
chr1 (16-109)||(9769569-9769662)
chr1 (18-99)||(11238019-11238100)
chr1 (1-109)||(13941332-13941440)
chr1 (16-109)||(42908784-42908877)
chr1 (3-115)||(18179335-18179447)
chr1 (1-69)||(33844670-33844738)
chr1 (1-69)||(33949240-33949308)
chr1 (3-115)||(50199452-50199564)
chr1 (34-109)||(16182822-16182897)
chr1 (16-123)||(41677059-41677166)
chr1 (1-115)||(1576095-1576209)
chr1 (16-69)||(9976373-9976426)
chr1 (17-69)||(48260179-48260231)
chr1 (1-112)||(2643789-2643900)
chr1 (1-86)||(32635176-32635260)
chr1 (3-69)||(35424193-35424259)
chr1 (1-109)||(9527438-9527545)
chr1 (3-69)||(12553247-12553313)
chr1 (38-96)||(48110555-48110613)
chr1 (1-122)||(195044-195165)
chr1 (16-109)||(18003829-18003922)
chr1 (1-109)||(23758226-23758335)
chr1 (1-109)||(9410302-9410409)
chr1 (1-61)||(19866536-19866596)
chr1 (42-109)||(29491482-29491550)
chr1 (42-109)||(5684135-5684201)
chr1 (1-115)||(9931094-9931208)
chr1 (38-69)||(24134635-24134666)
chr1 (38-85)||(35309761-35309808)
chr1 (37-96)||(43237799-43237858)
chr1 (42-96)||(11405482-11405536)
chr1 (42-123)||(17350059-17350141)
chr1 (42-96)||(19793552-19793606)
chr1 (33-83)||(29936687-29936737)
chr1 (42-96)||(38021278-38021332)
chr1 (1-115)||(38028544-38028658)
chr1 (38-68)||(49239858-49239888)
chr1 (1-98)||(1721164-1721261)
chr1 (16-109)||(7906315-7906408)
chr1 (42-86)||(1031623-1031667)
chr1 (16-99)||(4288611-4288694)
chr1 (38-86)||(14262732-14262780)
chr1 (41-69)||(15368858-15368886)
chr1 (42-86)||(19424082-19424126)
chr1 (19-67)||(27654997-27655045)
chr1 (1-69)||(41998150-41998218)
[»] chr8 (29 HSPs)
chr8 (3-109)||(220338-220444)
chr8 (3-109)||(689493-689599)
chr8 (3-109)||(733961-734067)
chr8 (3-109)||(857857-857963)
chr8 (16-109)||(14011027-14011120)
chr8 (3-69)||(4798519-4798583)
chr8 (6-69)||(12926457-12926520)
chr8 (1-110)||(22847236-22847345)
chr8 (1-69)||(35779806-35779874)
chr8 (1-65)||(39208843-39208907)
chr8 (38-69)||(3311493-3311524)
chr8 (34-69)||(17467330-17467365)
chr8 (6-69)||(25470825-25470888)
chr8 (42-109)||(39432343-39432410)
chr8 (38-69)||(41454838-41454869)
chr8 (38-69)||(45536771-45536802)
chr8 (42-115)||(2696539-2696613)
chr8 (21-115)||(7345435-7345529)
chr8 (42-96)||(13762527-13762581)
chr8 (8-69)||(34073222-34073281)
chr8 (1-86)||(36359694-36359777)
chr8 (42-99)||(28979049-28979106)
chr8 (1-69)||(33570405-33570471)
chr8 (1-112)||(37154523-37154633)
chr8 (41-69)||(1360148-1360176)
chr8 (42-109)||(2800031-2800099)
chr8 (38-86)||(8350472-8350520)
chr8 (34-86)||(16935623-16935675)
chr8 (41-69)||(43456666-43456694)
[»] chr5 (35 HSPs)
chr5 (16-104)||(31556836-31556924)
chr5 (3-109)||(10106643-10106749)
chr5 (1-99)||(41539337-41539435)
chr5 (1-109)||(20186879-20186985)
chr5 (1-109)||(11246468-11246576)
chr5 (1-96)||(13862151-13862245)
chr5 (1-69)||(29629921-29629987)
chr5 (1-69)||(3535910-3535978)
chr5 (1-96)||(23925569-23925662)
chr5 (1-69)||(28537188-28537256)
chr5 (1-109)||(35813217-35813324)
chr5 (4-96)||(37986844-37986936)
chr5 (34-69)||(22396995-22397030)
chr5 (1-115)||(17557037-17557150)
chr5 (6-99)||(40384274-40384367)
chr5 (8-80)||(22687862-22687934)
chr5 (1-69)||(27095510-27095578)
chr5 (1-69)||(29561701-29561769)
chr5 (38-69)||(15106898-15106929)
chr5 (38-69)||(17077414-17077445)
chr5 (38-69)||(31250200-31250231)
chr5 (38-69)||(38503268-38503299)
chr5 (38-69)||(43227919-43227950)
chr5 (42-96)||(4674830-4674884)
chr5 (42-115)||(9408965-9409039)
chr5 (42-96)||(36045149-36045203)
chr5 (38-96)||(42801452-42801510)
chr5 (16-69)||(10943769-10943820)
chr5 (1-106)||(27006356-27006461)
chr5 (1-69)||(29096284-29096350)
chr5 (42-86)||(1244742-1244786)
chr5 (42-109)||(1463883-1463951)
chr5 (38-86)||(2411305-2411353)
chr5 (42-109)||(6806655-6806723)
chr5 (21-109)||(40250171-40250259)
[»] scaffold0119 (1 HSPs)
scaffold0119 (1-69)||(1092-1160)
[»] scaffold0129 (1 HSPs)
scaffold0129 (1-96)||(7082-7177)
[»] scaffold0054 (1 HSPs)
scaffold0054 (16-69)||(67214-67267)
[»] scaffold0036 (1 HSPs)
scaffold0036 (41-109)||(25038-25107)
[»] scaffold0334 (1 HSPs)
scaffold0334 (38-69)||(5356-5387)
[»] scaffold0001 (1 HSPs)
scaffold0001 (38-69)||(419765-419796)
[»] scaffold0712 (1 HSPs)
scaffold0712 (44-109)||(4533-4598)
[»] scaffold0709 (1 HSPs)
scaffold0709 (44-109)||(4553-4618)
[»] scaffold1112 (1 HSPs)
scaffold1112 (38-86)||(2448-2496)
[»] scaffold1086 (1 HSPs)
scaffold1086 (1-96)||(2514-2607)


Alignment Details
Target: chr4 (Bit Score: 170; Significance: 4e-91; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 195 - 400
Target Start/End: Complemental strand, 32690035 - 32689831
Alignment:
Q  195 aagtaagtagttaagaaacacaaaattcattaactcgaggtattgtttgaaggaatgacatgagaattacttagccgaatcgctcgtctaacttttcagt 294  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32690035 aagtaagtagttaagaaacagaaaattcattaactcgaggtaatgttagaaggaatgacatgagaattacttagccgaatcgctcgtctaacttttcagt 32689936  T
Q  295 tcgacaacaaatttgacatactagcgtatacatttatgcatttgtaaaagtctccgcagtatgattccgatccactgtcagtatcgaagaaaactggccc 394  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||  |||||||||||||||||||     
T  32689935 tcgacaacaaatttgacatactagcgtatacatttatgcatttgtaaaagtctccgtagtatgataccgatccactgt-tgtatcgaagaaaactggcca 32689837  T
Q  395 tctaga 400  Q
    ||||||    
T  32689836 tctaga 32689831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 32690229 - 32690101
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||| |||| ||||||    
T  32690229 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgttcggggttcgaactctaacccctatatatcataatgtatgtca 32690130  T
Q  101 ctgccaactaagttacactcacgaagaca 129  Q
    ||||||||| |||||| ||||||| ||||    
T  32690129 ctgccaactgagttacgctcacgaggaca 32690101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 54854153 - 54854261
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||||||||||| ||||||||||||| ||| ||||||| |||||||||| | |||||||||||||||  | | ||||||||||| |  |||||||||     
T  54854153 ttgtcaagtagtctagtggctagaattcacttttttcaaggtgaataagtgtgatgtccggggttcgaaccccagcccctgcatataattatgcatgtcc 54854252  T
Q  101 ctgccaact 109  Q
    |||||||||    
T  54854253 ctgccaact 54854261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 49039424 - 49039527
Alignment:
Q  6 aagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgcc 105  Q
    |||||| || ||||||||||||| | | ||||||| ||||||||||||||||||||||||||||  | |  |||||||||| | |||||||||| |||||    
T  49039424 aagtagcctagtggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccagtccctgcatataacaatgcatgtccctgcc 49039523  T
Q  106 aact 109  Q
    ||||    
T  49039524 aact 49039527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 12585537 - 12585647
Alignment:
Q  5 caagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgc 104  Q
    |||||||||| ||||||||||||| | | |||||||||||||||||| ||||| ||||||||||| ||   ||| | ||||| | |||||||||| ||||    
T  12585537 caagtagtctagtggctagaattcacctttttcaagatgaataagtgaggtgttcggggttcgaactccggcccttacatataacaatgcatgtccctgc 12585636  T
Q  105 caactaagtta 115  Q
    ||||| |||||    
T  12585637 caactgagtta 12585647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 6202724 - 6202601
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||||||||  | ||| ||||||||| | | ||||||||||||||||| ||||||||||||||||||  ||| ||||| ||||  | || |||||||     
T  6202724 ttgtcaagtagcttagtgactagaattcacctttttcaagatgaataagtagggtgtccggggttcgaaccctagcccctacataaaacaaagcatgtcg 6202625  T
Q  101 ctgccaactaagttacactcacga 124  Q
    ||||||||| |||||  |||||||    
T  6202624 ctgccaactgagttaagctcacga 6202601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 9062297 - 9062187
Alignment:
Q  4 tcaagtagtctggtggctagaattc-tcttctttcaagatgaataagtggg-gtgtccgggg-ttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    ||||||||| ||||||||||||||| |||| ||| ||| |||||||||||| |||||||||| ||||||  | ||||| ||||||| | ||||||||||     
T  9062297 tcaagtagtatggtggctagaattcatctttttttaaggtgaataagtgggtgtgtccgggggttcgaaccccaacccttgcatataataatgcatgtcc 9062198  T
Q  101 ctgccaactaa 111  Q
    |||||||||||    
T  9062197 ctgccaactaa 9062187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 1589147 - 1589239
Alignment:
Q  16 gtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    ||||||||||||| | | ||| ||||||||||| |||| |||||||||||||||  || |||||||||||| | |||||||||||| |||||||    
T  1589147 gtggctagaattcaccttttt-aagatgaataaatgggatgtccggggttcgaatcctgacccctgcatataacaatgcatgtcaccgccaact 1589239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 20166437 - 20166315
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||| |||| || || |||||||||||||| |||||||  ||||||||||||| || ||||||||||      ||||||||||| | ||||||||||     
T  20166437 ttgtcaggtagcctagtagctagaattctcttttttcaaggagaataagtggggtatctggggttcgaacctcggcccctgcatataacaatgcatgtcc 20166338  T
Q  101 ctgccaactaagttacactcacg 123  Q
    ||||||||| || ||| ||||||    
T  20166337 ctgccaactgagctacgctcacg 20166315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 20610858 - 20610752
Alignment:
Q  3 gtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcact 102  Q
    |||| ||||||| ||||||||||||| | | ||| ||| |||||||||||| ||||||| |||||||  |   ||||||||||| | |||||||||| ||    
T  20610858 gtcaggtagtctagtggctagaattcaccttttttaaggtgaataagtgggatgtccggagttcgaaccccggcccctgcatataacaatgcatgtccct 20610759  T
Q  103 gccaact 109  Q
    |||||||    
T  20610758 gccaact 20610752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33359938 - 33359870
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||| |||||| || ||||||||||||| | | ||||||| |||||||||||||||||| |||||||||    
T  33359938 ttgttaagtagcctagtggctagaattcacctttttcaaggtgaataagtggggtgtccagggttcgaa 33359870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 10098242 - 10098178
Alignment:
Q  3 gtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||| ||||||| |||||||||||||   ||||  ||||||||||||||||||||||||||||||||    
T  10098242 gtcaggtagtctagtggctagaattca--tcttataagatgaataagtggggtgtccggggttcgaa 10098178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 32887251 - 32887184
Alignment:
Q  2 tgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||| |||||| ||||||| ||||| | | ||||||||| |||||||||||||||||| |||||||    
T  32887251 tgtcaattagtcttgtggctaaaattcacatttttcaagattaataagtggggtgtccggagttcgaa 32887184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 49319481 - 49319406
Alignment:
Q  34 tttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    ||||||| |||||||||||||||||||||||| |||  |  |||||||||||| | ||||||||||  ||||||||    
T  49319481 tttcaaggtgaataagtggggtgtccggggttggaaccccgacccctgcatataataatgcatgtccatgccaact 49319406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 18497494 - 18497392
Alignment:
Q  20 ctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgt-cactgccaactaagttacac 118  Q
    |||||||| |||| ||| |||  ||||||||||| ||||||| |||||||  | ||||||||||||| | ||||||||| | ||| ||||||||||| ||    
T  18497494 ctagaattttctttttttaaggagaataagtgggatgtccggagttcgaaccccaacccctgcatataacaatgcatgtcccctgtcaactaagttatac 18497395  T
Q  119 tca 121  Q
    |||    
T  18497394 tca 18497392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 30116507 - 30116628
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||| ||||||| |||||||| ||| || | |||||||  ||||||||||||||| || |||||||| || |||||| | |||| | |||||||||||    
T  30116507 ttgtcaggtagtctagtggctaggattatcctttttcaagcagaataagtggggtgttcgaggttcgaa-tccaaccccagaatataacaatgcatgtca 30116605  T
Q  101 ctgccaactaagttacactcacg 123  Q
     || ||||| || || |||||||    
T  30116606 ttgtcaactgagctatactcacg 30116628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 35230271 - 35230337
Alignment:
Q  3 gtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||||||||| ||||||| ||||| | | ||||||| | ||||||||||||||||| ||||||||    
T  35230271 gtcaagtagtctagtggctaaaattcacctatttcaaggtaaataagtggggtgtccgaggttcgaa 35230337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 3465695 - 3465609
Alignment:
Q  8 gtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    ||||||| ||||||||||||| |  |||  ||| |||||||||||||||||||||||||||| ||   ||||||||||| | |||||||    
T  3465695 gtagtctagtggctagaattcac--cttataaggtgaataagtggggtgtccggggttcgaactccggcccctgcatataataatgcat 3465609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 36045949 - 36045853
Alignment:
Q  3 gtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtct-aacccctgcatatcagaatgcatgtc 99  Q
    |||| |||||||| |||| ||||||| | | |||||| |||| |||||| ||||||||| ||||||| ||| ||||||||||||| | ||||||||||    
T  36045949 gtcatgtagtctgatggccagaattcacctttttcaatatgactaagtgaggtgtccggagttcgaa-tctcaacccctgcatataacaatgcatgtc 36045853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 41003187 - 41003255
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtcactgccaacta 110  Q
    |||||||||||||||||||| ||||||| || ||||||||||||| | |||||| |||| ||||||||||    
T  41003187 tgaataagtggggtgtccggagttcgaactc-aacccctgcatataacaatgcattgtccctgccaacta 41003255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 55967657 - 55967600
Alignment:
Q  43 gaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    ||||||||||||||||||||||||||| | |  ||||||||||| | |||||||||||    
T  55967657 gaataagtggggtgtccggggttcgaattttgtcccctgcatataacaatgcatgtca 55967600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 6637733 - 6637781
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    |||||||||||||||||||| |||||||||||  | |||||||||||||    
T  6637733 aagatgaataagtggggtgttcggggttcgaaccccaacccctgcatat 6637781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 9084843 - 9084771
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtcactgccaact 109  Q
    ||||||||||||||||||||||| ||||||||  |  |||||||||||| | |||||| |||| |||||||||    
T  9084843 aagatgaataagtggggtgtccgaggttcgaatcccgacccctgcatataacaatgcattgtccctgccaact 9084771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 23226679 - 23226787
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||||||||| | ||||||| ||||| | | ||| ||| |||||||||| | ||||||| |||||||  | ||| ||||||||| | ||||||||||     
T  23226679 ttgtcaagtagtatagtggctataattcacattttttaaggtgaataagtgagatgtccggtgttcgaaccccaactcctgcatataacaatgcatgtcc 23226778  T
Q  101 ctgccaact 109  Q
    ||| |||||    
T  23226779 ctgtcaact 23226787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 48512279 - 48512211
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtcactgccaact 109  Q
    ||||||||||||||||||||||| ||||  ||| ||||||||||| | |||||| |||| |||||||||    
T  48512279 tgaataagtggggtgtccggggtacgaaccctagcccctgcatataacaatgcattgtccctgccaact 48512211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 49743483 - 49743375
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||||||||| | |||| || ||||| | | ||||||| | |||||||| |||||||||||||||||  |   ||||||||||| | ||||||| ||     
T  49743483 ttgtcaagtagtttagtggttaaaattcacctttttcaaggtaaataagtgaggtgtccggggttcgaatcccggcccctgcatataataatgcatatcc 49743384  T
Q  101 ctgccaact 109  Q
    |||||||||    
T  49743383 ctgccaact 49743375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 53815776 - 53815708
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtcactgccaact 109  Q
    ||||||||||||||||||||||||||||  | | ||||||||||| | |||||| |||| |||||||||    
T  53815776 tgaataagtggggtgtccggggttcgaaccccagcccctgcatataataatgcattgtccctgccaact 53815708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 55677226 - 55677158
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||||||||| | |||| |||||||| ||| ||||||  ||||||||||| |||||||| |||||||    
T  55677226 ttgtcaagtagtttagtggttagaattcacttatttcaaagtgaataagtggagtgtccggagttcgaa 55677158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 11491230 - 11491261
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  11491230 aagatgaataagtggggtgtccggggttcgaa 11491261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 15185199 - 15185092
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    ||||||| |||||| ||||||| ||||||||| |||||||  |||| ||| |||||||| || ||| ||  |  |||||||||||| | ||||||| ||     
T  15185199 ttgtcaaatagtctagtggctaaaattctcttttttcaaggagaatgagtagggtgtccaggattcaaaccccgacccctgcatataacaatgcatatcc 15185100  T
Q  101 ctgccaac 108  Q
    ||||||||    
T  15185099 ctgccaac 15185092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 27862842 - 27862873
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  27862842 aagatgaataagtggggtgtccggggttcgaa 27862873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 29269326 - 29269357
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  29269326 aagatgaataagtggggtgtccggggttcgaa 29269357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 69
Target Start/End: Complemental strand, 29785238 - 29785203
Alignment:
Q  34 tttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||| ||||||||||||||||||||||||||||    
T  29785238 tttcaaggtgaataagtggggtgtccggggttcgaa 29785203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Complemental strand, 37274664 - 37274633
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  37274664 aagatgaataagtggggtgtccggggttcgaa 37274633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 40406971 - 40407002
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  40406971 aagatgaataagtggggtgtccggggttcgaa 40407002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 43362179 - 43362210
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  43362179 aagatgaataagtggggtgtccggggttcgaa 43362210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 45847937 - 45847968
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  45847937 aagatgaataagtggggtgtccggggttcgaa 45847968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Complemental strand, 46283206 - 46283175
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  46283206 aagatgaataagtggggtgtccggggttcgaa 46283175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 8690294 - 8690240
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    ||||||||||||||||||||||||||||  |  |||||||||||| | |||||||    
T  8690294 tgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcat 8690240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 31480390 - 31480283
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtc 99  Q
    |||| ||||||||| |||| |||||||| | | ||  ||| |||||||||||||||| ||||||||||| |  | ||||||||||| | |||||| ||||    
T  31480390 ttgttaagtagtctagtggttagaattcacgtttt--aaggtgaataagtggggtgttcggggttcgaatttcagcccctgcatataacaatgcattgtc 31480293  T
Q  100 actgccaact 109  Q
     |||||||||    
T  31480292 cctgccaact 31480283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 32885768 - 32885714
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    ||||||||||||||||||| |||||||| ||  |||||||||||| | |||||||    
T  32885768 tgaataagtggggtgtccgaggttcgaactccgacccctgcatataataatgcat 32885714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 36257807 - 36257747
Alignment:
Q  7 agtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||| || ||||||||||||| ||| ||| ||| ||||||||||||||||||||||||||||    
T  36257807 agtagcctagtggctagaattcactt-tttaaag-tgaataagtggggtgtccggggttcgaa 36257747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 37032194 - 37032248
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    ||||||||||||||||||||||||||||  |  |||||||||||| | |||||||    
T  37032194 tgaataagtggggtgtccggggttcgaatcccgacccctgcatataataatgcat 37032248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 44374090 - 44374148
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    ||||| ||||||||||||||||| | |||||| |||||| ||||||||| | |||||||    
T  44374090 aagataaataagtggggtgtccgagattcgaattctaactcctgcatataataatgcat 44374148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 15507667 - 15507582
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    ||||||||||||||  ||||||||||||   | ||||||  | ||| |||||||||| |||||||||||  | |||||||||||||    
T  15507667 ttgtcaagtagtctaatggctagaattcatatttttcaaagtaaattagtggggtgttcggggttcgaaccccaacccctgcatat 15507582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 18740923 - 18741004
Alignment:
Q  34 tttcaagatgaataagtgggg-tgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaactaagtt 114  Q
    ||||||| ||||||||||||| |||  |||||||||| ||  |||||||||||| | ||||||| || ||||||||| ||||    
T  18740923 tttcaaggtgaataagtgggggtgtttggggttcgaactccgacccctgcatataataatgcatatctctgccaactgagtt 18741004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 21023341 - 21023394
Alignment:
Q  16 gtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||| |||||||| | | ||||||| ||||||||||||||||| ||||||||||    
T  21023341 gtggttagaattcacctttttcaaggtgaataagtggggtgtcgggggttcgaa 21023394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 30203375 - 30203306
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctc-ttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||| || |||| |||||| | | || ||||||||||||||||||| || |||||||||||||    
T  30203375 ttgtcaagtagcctagtggttagaatacacattttttcaagatgaataagtggagtatccggggttcgaa 30203306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 33076610 - 33076553
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtc 99  Q
    ||||||||| ||||||||||||||||||  |  |||||||||||| | ||||||||||    
T  33076610 tgaataagtagggtgtccggggttcgaaccccgacccctgcatataataatgcatgtc 33076553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 37997820 - 37997928
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattc-tcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtc 99  Q
    |||||||| ||| | ||||||||||||| || | ||| ||| ||||||||||||||||| ||||||||||  | |  |||||||||| | |||| |||||    
T  37997820 ttgtcaagcagtttagtggctagaattcatccttttt-aaggtgaataagtggggtgtctggggttcgaaccccagaccctgcatataacaatgaatgtc 37997918  T
Q  100 actgccaact 109  Q
     |||||||||    
T  37997919 cctgccaact 37997928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 44273016 - 44272959
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtc 99  Q
    |||||||||||||| |||| |||||||| ||  |||||||||||| | ||||||||||    
T  44273016 tgaataagtggggtatccgaggttcgaactccgacccctgcatataataatgcatgtc 44272959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 45350356 - 45350303
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca 95  Q
    |||||||||||||||||||||||||||| ||  ||| |||||||| | ||||||    
T  45350356 tgaataagtggggtgtccggggttcgaactccgacctctgcatataataatgca 45350303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 45359835 - 45359782
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca 95  Q
    |||||||||||||||||||||||||||| ||  ||| |||||||| | ||||||    
T  45359835 tgaataagtggggtgtccggggttcgaactccgacctctgcatataataatgca 45359782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 4419660 - 4419788
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||||||||| | | || |||||||| ||| ||||||| ||||||| || ||||| | ||||| |||  |   ||||||||||| | ||||||||||     
T  4419660 ttgtcaagtagtgtagcggttagaattcacttttttcaaggtgaataaatgaggtgttctgggtttgaaccccggcccctgcatataacaatgcatgtct 4419759  T
Q  101 ctgccaactaagttacactcacgaagaca 129  Q
    ||| ||||| |||||  ||||||| ||||    
T  4419760 ctgacaactgagttatgctcacgatgaca 4419788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 12856264 - 12856220
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    |||||||||||||||||||||||||||| ||  |||||| |||||    
T  12856264 tgaataagtggggtgtccggggttcgaactccgaccccttcatat 12856220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 14149873 - 14149805
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtcactgccaact 109  Q
    ||||||||||||||||||||||||||||  |   ||||||||||| | |||||| |||| |||||||||    
T  14149873 tgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaact 14149805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 24039989 - 24039937
Alignment:
Q  17 tggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||||||||| | | ||||||| |||||||||| ||||| |||||||||||    
T  24039989 tggctagaattcacctttttcaaggtgaataagtgaggtgttcggggttcgaa 24039937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 66
Target Start/End: Original strand, 24234085 - 24234113
Alignment:
Q  38 aagatgaataagtggggtgtccggggttc 66  Q
    |||||||||||||||||||||||||||||    
T  24234085 aagatgaataagtggggtgtccggggttc 24234113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 28520746 - 28520814
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtcactgccaact 109  Q
    ||||||||||||||||||||||||||||  |   ||||||||||| | |||||| |||| |||||||||    
T  28520746 tgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaact 28520814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 36954217 - 36954149
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtcactgccaact 109  Q
    ||||||| ||||||||||||||||||||  |  |||||||||||| | |||||| |||| |||||||||    
T  36954217 tgaataaatggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccctgccaact 36954149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 48968225 - 48968293
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtcactgccaact 109  Q
    ||||||||||||||||||||||||||||  |   ||||||||||| | |||||| |||| |||||||||    
T  48968225 tgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaact 48968293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 7e-19; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 10020443 - 10020551
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    ||||||||||| || |||| |||||||| | | |||||||||||||||||||| ||| |||||||||||  | ||||||||||||| | ||||||||||     
T  10020443 ttgtcaagtaggctagtgggtagaattcacctttttcaagatgaataagtgggttgttcggggttcgaaccccaacccctgcatataacaatgcatgtcc 10020542  T
Q  101 ctgccaact 109  Q
    ||| |||||    
T  10020543 ctgtcaact 10020551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 32309125 - 32309229
Alignment:
Q  4 tcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactg 103  Q
    ||||||||||| ||||||||||||| | | ||| ||| ||||||| ||||||||| | | |||||| ||  |||||||||||| | |||||||||| |||    
T  32309125 tcaagtagtctagtggctagaattcacattttttaaggtgaataactggggtgtctgagattcgaactccgacccctgcatataacaatgcatgtccctg 32309224  T
Q  104 ccaac 108  Q
    |||||    
T  32309225 ccaac 32309229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 11808160 - 11808061
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttc-aagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtc 99  Q
    |||||||||||||| || | |||||||| | | |||| ||| ||||||||||||||||||||||||||||  |  |||||||||||| | ||||||||||    
T  11808160 ttgtcaagtagtctagttgttagaattcacgtttttctaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtc 11808061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 43635709 - 43635595
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||||||||| | ||||||||||||| |   ||  ||| ||||||||||||||||||||||||||||  |  ||| |||||||| | |||||||||      
T  43635709 ttgtcaagtagtttagtggctagaattcaccctttgtaaggtgaataagtggggtgtccggggttcgaaccccgaccgctgcatataacaatgcatgttt 43635610  T
Q  101 ctgccaactaagtta 115  Q
    ||||||||| |||||    
T  43635609 ctgccaactgagtta 43635595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 23799379 - 23799307
Alignment:
Q  43 gaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaactaagtta 115  Q
    |||||||||||||||||| ||||||||  |  |||||||||||| | |||||||||| ||||||||| |||||    
T  23799379 gaataagtggggtgtccgaggttcgaatcccgacccctgcatataacaatgcatgtctctgccaactgagtta 23799307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 32814908 - 32814840
Alignment:
Q  41 atgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    |||||||||||||||||||||| |||||| ||  |||||||||||| | |||||||||| || ||||||    
T  32814908 atgaataagtggggtgtccgggattcgaactccgacccctgcatataataatgcatgtccctaccaact 32814840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 35498516 - 35498405
Alignment:
Q  3 gtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcact 102  Q
    |||||||| | | ||||||||||||| | | ||||||  |||||||||||||||||||  ||| |||  | ||||||||||||| | |||||||||| ||    
T  35498516 gtcaagtaatatagtggctagaattcacctttttcaaagtgaataagtggggtgtccgaagtttgaaccc-aacccctgcatataataatgcatgtccct 35498418  T
Q  103 gccaactaagtta 115  Q
    ||||||| |||||    
T  35498417 gccaactgagtta 35498405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 24579263 - 24579357
Alignment:
Q  4 tcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtct-aacccctgcatatcagaatgcatgt 98  Q
    ||||||||| | |||| |||||||| | | ||||||| ||||||||||||||||| |||||||||| ||| | ||||||||||| | |||||||||    
T  24579263 tcaagtagtttagtggatagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaa-tctcatcccctgcatataataatgcatgt 24579357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 7392280 - 7392386
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||||||||| | ||||||| |||||   | ||||||| |||||||||||||||| |||||||| ||  | |||| |||||||| | |||||||||      
T  7392280 ttgtcaagtagtttagtggctataattcatatttttcaaggtgaataagtggggtgttcggggttcaaaccccaacctctgcatataacaatgcatgttc 7392379  T
Q  101 ctgccaa 107  Q
    |||||||    
T  7392380 ctgccaa 7392386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 43712287 - 43712401
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||| ||||| | ||||||||||||||| | |||||||  | ||||||||||| |||| ||||||||  |  ||||||| |||| | ||||||||||     
T  43712287 ttgtcaggtagtttagtggctagaattctcctttttcaaggaggataagtggggtatccgaggttcgaaccccgacccctgtatataacaatgcatgtcc 43712386  T
Q  101 ctgccaactaagtta 115  Q
    || |||||| |||||    
T  43712387 ctaccaactgagtta 43712401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 17997714 - 17997780
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||||||||||| ||||||||||||| |  |||| ||| ||||||| |||||||||| |||||||||    
T  17997714 ttgtcaagtagtctagtggctagaattcac--cttttaaggtgaataaatggggtgtccagggttcgaa 17997780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 19924873 - 19924780
Alignment:
Q  16 gtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    ||||||||||||| ||| ||| ||| |||||||||||||| |  ||| |||||| ||| ||  |||||||| | |||||||||| |||||||||    
T  19924873 gtggctagaattcactttttttaaggtgaataagtggggtatatgggattcgaactctcacttctgcatataataatgcatgtccctgccaact 19924780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 23470475 - 23470548
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtcta 74  Q
    |||||| ||||||| |||| ||||| || | | ||||||||||||||| |||| ||||||||||||||| ||||    
T  23470475 ttgtcaggtagtctagtggttagaactcacctttttcaagatgaataaatgggatgtccggggttcgaactcta 23470548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 24427451 - 24427370
Alignment:
Q  34 tttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaactaagtta 115  Q
    ||||||| ||||||| |||||| | |||||||||||   | |||||||||||| | |||||||||| ||||||||| |||||    
T  24427451 tttcaaggtgaataaatggggtattcggggttcgaaccttgacccctgcatataacaatgcatgtctctgccaactgagtta 24427370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 33202530 - 33202596
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||| |||| || ||||||||||||| |  |||  ||||||||||||||||||||||||||||||||    
T  33202530 ttgtcaggtagcctagtggctagaattcac--cttataagatgaataagtggggtgtccggggttcgaa 33202596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 14707372 - 14707328
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    ||||||||||||||||||||||||||||  | |||||||||||||    
T  14707372 tgaataagtggggtgtccggggttcgaaccccaacccctgcatat 14707328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 41000881 - 41000813
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||| |||||||| | | ||| ||| |||||||||||| ||| |||| ||||||    
T  41000881 ttgtcaagtagtctggtggttagaattcacattttttaaggtgaataagtgggatgttcgggattcgaa 41000813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 1513575 - 1513500
Alignment:
Q  34 tttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    ||||||| |||||||||||||||| ||| |||||||    ||||||| ||||| | |||||||||| |||||||||    
T  1513575 tttcaaggtgaataagtggggtgttcggtgttcgaacctcaacccctacatataacaatgcatgtccctgccaact 1513500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 3889811 - 3889842
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  3889811 aagatgaataagtggggtgtccggggttcgaa 3889842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 46 - 109
Target Start/End: Complemental strand, 7465542 - 7465479
Alignment:
Q  46 taagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    ||||||||||||||||||||||||  |   ||||||||||| | |||||||||| |||||||||    
T  7465542 taagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatgtctctgccaact 7465479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 29658250 - 29658314
Alignment:
Q  3 gtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||| || ||||||||||||| |  |||  ||| ||||||||||||||||||||||||||||    
T  29658250 gtcaagtagcctagtggctagaattcac--cttataaggtgaataagtggggtgtccggggttcgaa 29658314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Complemental strand, 31793552 - 31793521
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  31793552 aagatgaataagtggggtgtccggggttcgaa 31793521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 35195931 - 35195856
Alignment:
Q  34 tttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    ||||||| ||||||| |||||||| |||||||||||  |   ||||||||||| | |||||||||| |||||||||    
T  35195931 tttcaaggtgaataaatggggtgttcggggttcgaaccccggcccctgcatataataatgcatgtccctgccaact 35195856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 37410462 - 37410553
Alignment:
Q  8 gtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtc 99  Q
    ||||||| |||||||||||||||   ||| |||  ||||||||| ||||||||| |||||||   | |||||||||||| | ||||||||||    
T  37410462 gtagtctagtggctagaattctccctttttaaggagaataagtgaggtgtccggagttcgaaccttgacccctgcatataacaatgcatgtc 37410553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Complemental strand, 40273905 - 40273874
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  40273905 aagatgaataagtggggtgtccggggttcgaa 40273874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 1649271 - 1649205
Alignment:
Q  3 gtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||| ||| || ||||||||||||| |   ||||||| |||||||||||||||||| |||||||||    
T  1649271 gtcaaatagcctagtggctagaattcaccattttcaaggtgaataagtggggtgtccagggttcgaa 1649205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 3955021 - 3955087
Alignment:
Q  3 gtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||||| |||  |||||| ||||| | | ||| ||||||||||||||||||||| ||||||||||    
T  3955021 gtcaagtaatctaatggctaaaattcacattttttaagatgaataagtggggtgtctggggttcgaa 3955087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 10958148 - 10958086
Alignment:
Q  7 agtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||| || ||||||||||||| | | |||  || ||||||||||||||||||||||||||||    
T  10958148 agtagcctagtggctagaattcaccttttttgaggtgaataagtggggtgtccggggttcgaa 10958086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 38792292 - 38792238
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    ||||||||| ||||||||||||||| || ||| |||||||||||| | |||||||    
T  38792292 tgaataagtagggtgtccggggttcaaactctgacccctgcatataataatgcat 38792238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 44409321 - 44409208
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    ||||||||||  || |||| |||||||| | | ||||||| |||||||||||||||| | |||||||||  |  |||| ||||||| | ||||||||||     
T  44409321 ttgtcaagtaacctagtggttagaattcacctttttcaaggtgaataagtggggtgttc-gggttcgaaccccgacccttgcatataataatgcatgtcc 44409223  T
Q  101 ctgccaactaagtta 115  Q
    |||| |||| |||||    
T  44409222 ctgctaactgagtta 44409208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 48175071 - 48174966
Alignment:
Q  17 tggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaactaagttac 116  Q
    |||||||||||| | | |||||||  |||||||||||||||||||||||||||  |   |||||| |||| | ||||||||||  |||||||| || ||     
T  48175071 tggctagaattcacct-tttcaaggggaataagtggggtgtccggggttcgaacaccggcccctgtatataataatgcatgtccttgccaactgagctat 48174973  T
Q  117 actcacg 123  Q
    |||||||    
T  48174972 actcacg 48174966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 2567813 - 2567874
Alignment:
Q  8 gtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||| |||| |||||||| | | ||||||| | ||||||||||||| ||||||||||||    
T  2567813 gtagtctagtggttagaattcacctttttcaaggttaataagtggggtgaccggggttcgaa 2567874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 19687282 - 19687319
Alignment:
Q  24 aattctcttctttcaagatgaataagtggggtgtccgg 61  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  19687282 aattcacttttttcaagatgaataagtggggtgtccgg 19687319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 47552332 - 47552266
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||| |||| |||||||||||||||| |  |||  ||| ||||||||| ||||||||||||||||||    
T  47552332 ttgtcaggtagcctggtggctagaattcac--cttataaggtgaataagtagggtgtccggggttcgaa 47552266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 8903777 - 8903837
Alignment:
Q  9 tagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||| ||| ||||||||| |||  |||||||||||||||||  ||||| ||||||||||    
T  8903777 tagtctagtgactagaattcactttattcaagatgaataagtgatgtgtctggggttcgaa 8903837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 21285368 - 21285436
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtcactgccaact 109  Q
    ||||||||||||||||||||||||||||  |   ||||||||||| | |||||| |||| |||||||||    
T  21285368 tgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcattgtccctgccaact 21285436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 21877658 - 21877714
Alignment:
Q  13 ctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||| |||| | | | |||||||||||||||||||||||| || ||||||||    
T  21877658 ctggtggctggaatccacctttttcaagatgaataagtggggtgttcgaggttcgaa 21877714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 27454100 - 27454064
Alignment:
Q  33 ctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  27454100 cttttaagatgaataagtggggtgtccgaggttcgaa 27454064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 31475855 - 31475923
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgc-atgtcactgccaact 109  Q
    ||||||||||||||||| ||||||||||  | | ||||||||||| | ||||| ||||| |||||||||    
T  31475855 tgaataagtggggtgtcaggggttcgaaccccagcccctgcatataataatgcaatgtccctgccaact 31475923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 33555153 - 33555105
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    ||||||||||||||| ||||||||||||||||  || |||| |||||||    
T  33555153 aagatgaataagtggagtgtccggggttcgaaccctgacccttgcatat 33555105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 45217619 - 45217555
Alignment:
Q  32 tctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    ||||| ||||| ||||| |||||||||||||||||||| || ||||| | ||||| | |||||||    
T  45217619 tcttttaagataaataaatggggtgtccggggttcgaactccaacccatacatattaaaatgcat 45217555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 48525657 - 48525613
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    |||||||||| |||||||||||||||||  | |||||||||||||    
T  48525657 tgaataagtgaggtgtccggggttcgaaccccaacccctgcatat 48525613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 7e-19; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 30833122 - 30833030
Alignment:
Q  17 tggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    |||||||||||||| | |||||||  |||||||||||||||||||||||||||  |  |||||||||||| | |||||||||| |||||||||    
T  30833122 tggctagaattctcctttttcaaggagaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccctgccaact 30833030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 4844264 - 4844144
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||||||||||| |||| |||||||| ||| ||||||| |||||||||| |||||| | ||||  ||  |  |||||||||||| | ||||||||||     
T  4844264 ttgtcaagtagtctagtggttagaattcacttttttcaaggtgaataagtgaggtgtctgaggtttaaaccccgacccctgcatataacaatgcatgtcc 4844165  T
Q  101 ctgccaactaagttacactca 121  Q
    ||||||||| ||||| |||||    
T  4844164 ctgccaactgagttatactca 4844144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 30668162 - 30668285
Alignment:
Q  5 caagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgc 104  Q
    |||||||||| ||| ||| ||||| | | ||| ||| |||||||||||||||| || |||||||| ||| |||||||||||| | ||||||||||  |||    
T  30668162 caagtagtctagtgactataattcacattttttaaggtgaataagtggggtgttcgtggttcgaactctgacccctgcatataataatgcatgtctatgc 30668261  T
Q  105 caactaagttacactcacgaagac 128  Q
    ||||| |||||  |||||| ||||    
T  30668262 caactgagttatgctcacggagac 30668285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 26669633 - 26669701
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||||||||| | ||||||||||||| | | ||||||| ||||||||||||||||| ||||||||||    
T  26669633 ttgtcaagtagtttagtggctagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaa 26669701  T

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Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 10455857 - 10455755
Alignment:
Q  8 gtagtctggtggctagaattctcttctttcaagatgaataagt-ggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgcca 106  Q
    ||||||| |||| |||||||||||| |||||||  |||||||| |||||||||||||||||||  |   ||||||||||| | |||||||||  ||||||    
T  10455857 gtagtctagtggttagaattctcttttttcaaggagaataagtgggggtgtccggggttcgaaccccggcccctgcatataacaatgcatgttcctgcca 10455758  T
Q  107 act 109  Q
    |||    
T  10455757 act 10455755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 3030088 - 3029964
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctc-ttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtc 99  Q
    ||||||| |||||  |||| |||||||| | || ||| ||| |||||||||||||||||| ||||||||| || |||| || ||||| | |||  |||||    
T  3030088 ttgtcaaatagtccagtggttagaattcacatttttttaaggtgaataagtggggtgtccagggttcgaactccaaccactacatataataatttatgtc 3029989  T
Q  100 actgccaactaagttacactcacga 124  Q
     |||||||||||||||  |||||||    
T  3029988 cctgccaactaagttatgctcacga 3029964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 22730690 - 22730790
Alignment:
Q  16 gtggctagaattctc-ttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaactaagtt 114  Q
    ||||||||||||| | || ||| ||| ||||||||||||||||||| |||||||| |  |  |||||||||| | |||||||||| ||||||||| ||||    
T  22730690 gtggctagaattcaccttattttaaggtgaataagtggggtgtccgaggttcgaacttcagtccctgcatataacaatgcatgtctctgccaactgagtt 22730789  T
Q  115 a 115  Q
    |    
T  22730790 a 22730790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 8309271 - 8309177
Alignment:
Q  16 gtggctagaattctc-ttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    ||||||||||||| | || ||||||| |||||| |||||||||||||||||||||   |  ||| ||||||| | |||||||||| |||||||||    
T  8309271 gtggctagaattcaccttttttcaaggtgaataggtggggtgtccggggttcgaaacttggcccatgcatataacaatgcatgtccctgccaact 8309177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 12127887 - 12127978
Alignment:
Q  3 gtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||| ||||||| ||||||||||||| |  |||  ||| ||||||||||| |||||||||||||||| ||  |||||||||||| | |||||||    
T  12127887 gtcaggtagtctagtggctagaattcac--cttataaggtgaataagtggcgtgtccggggttcgaattccgacccctgcatataataatgcat 12127978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 9031888 - 9031779
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctc-ttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtc 99  Q
    |||||||||||||| |||| |||||||| | || |||  | |||||||||||||||||| | ||||| || |  || |||||||||| | ||||||||||    
T  9031888 ttgtcaagtagtctagtggttagaattcaccttttttttaaatgaataagtggggtgtctgaggttcaaacttcaagccctgcatataacaatgcatgtc 9031789  T
Q  100 actgccaact 109  Q
     |||||||||    
T  9031788 cctgccaact 9031779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 9051280 - 9051333
Alignment:
Q  16 gtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||| | |||||||| ||||||||| | |||||||||||||||    
T  9051280 gtggctagaattctcctttttcaagacgaataagtgagttgtccggggttcgaa 9051333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 24257022 - 24256969
Alignment:
Q  16 gtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||  ||| ||||||| |||||||||||||| |||||||||||||    
T  24257022 gtggctagaatttacttttttcaaggtgaataagtggggtatccggggttcgaa 24256969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 34524981 - 34524888
Alignment:
Q  16 gtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    ||||||||||||| | | |||| || |||||||||||||||| ||||| |||||  |   ||||||||||| | |||||||||| |||||||||    
T  34524981 gtggctagaattcacctttttccaggtgaataagtggggtgttcggggctcgaaccccggcccctgcatataacaatgcatgtccctgccaact 34524888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 35190875 - 35190789
Alignment:
Q  8 gtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    ||||||| ||||||||||||| |  |||  ||| |||||||||||||||| ||||||||||| ||  |||||||||||| | |||||||    
T  35190875 gtagtctagtggctagaattcac--cttataaggtgaataagtggggtgttcggggttcgaactccgacccctgcatataataatgcat 35190789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 9438421 - 9438328
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    ||||||||||| || |||| |||||||| |  |||  ||| ||||| ||||||||||||||||||||||  | ||||||||||||| | |||||||    
T  9438421 ttgtcaagtagcctagtggttagaattcac--cttataaggtgaatgagtggggtgtccggggttcgaaccccaacccctgcatataataatgcat 9438328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 22389726 - 22389819
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||| ||||||| | ||||||||||| |  |||  ||| ||||||||||||||||||||| ||||||  || |||||||||||| | |||||||    
T  22389726 ttgtcaggtagtctagcggctagaattcac--cttataaggtgaataagtggggtgtccgggattcgaaccctgacccctgcatataataatgcat 22389819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 34675780 - 34675848
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||||||||| | ||||||||||||| | | ||| ||  ||||||| ||||||||||||||||||||    
T  34675780 ttgtcaagtagtgtagtggctagaattcacattttttaaagtgaataactggggtgtccggggttcgaa 34675848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Complemental strand, 3448436 - 3448405
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  3448436 aagatgaataagtggggtgtccggggttcgaa 3448405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 4854317 - 4854348
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  4854317 aagatgaataagtggggtgtccggggttcgaa 4854348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 6228271 - 6228302
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  6228271 aagatgaataagtggggtgtccggggttcgaa 6228302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 18903378 - 18903409
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  18903378 aagatgaataagtggggtgtccggggttcgaa 18903409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 20415573 - 20415604
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  20415573 aagatgaataagtggggtgtccggggttcgaa 20415604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 20858400 - 20858471
Alignment:
Q  44 aataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaactaagtta 115  Q
    ||||| ||||||||||||  ||||||  | ||||||||||||| | |||||||||| ||||||||| |||||    
T  20858400 aataaatggggtgtccggaattcgaaccccaacccctgcatataacaatgcatgtccctgccaactgagtta 20858471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Complemental strand, 22983664 - 22983633
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  22983664 aagatgaataagtggggtgtccggggttcgaa 22983633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 23804744 - 23804775
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  23804744 aagatgaataagtggggtgtccggggttcgaa 23804775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 25064682 - 25064741
Alignment:
Q  40 gatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtc 99  Q
    |||||| |||||||||||| ||||||||||  | ||||||||||||| | ||||||||||    
T  25064682 gatgaagaagtggggtgtctggggttcgaaccccaacccctgcatataataatgcatgtc 25064741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 11636743 - 11636689
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||| ||||||||||||||||||||||| ||  |||||||||||| | |||||||    
T  11636743 tgaaaaagtggggtgtccggggttcgaactccgacccctgcatataataatgcat 11636689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 12089177 - 12089123
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||||||||||||||||||||||||| ||   ||||||||||| | |||||||    
T  12089177 tgaataagtggggtgtccggggttcgaactccggcccctgcatataataatgcat 12089123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 32394145 - 32394032
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||||||||||| ||||||||||||   || ||| ||| ||||||||||||||||||||| ||| ||    |||| |||||||  | ||| ||||||     
T  32394145 ttgtcaagtagtctagtggctagaatt-aatttttttaaggtgaataagtggggtgtccgggattcaaacctcaacctctgcataagacaatacatgtcc 32394047  T
Q  101 ctgccaactaagtta 115  Q
    ||||||||| |||||    
T  32394046 ctgccaactgagtta 32394032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 6455574 - 6455506
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattc-tcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||| || ||| ||||||||| |||| ||||||| ||||||||| |||||||||| |||||||    
T  6455574 ttgtcaagtagcctagtgtctagaattcatctt-tttcaaggtgaataagtagggtgtccggagttcgaa 6455506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 6530180 - 6530242
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggtt 65  Q
    |||||||||||||| ||||||||||||| |  |||  ||| ||||||||||||||||||| ||||    
T  6530180 ttgtcaagtagtctagtggctagaattcac--cttataaggtgaataagtggggtgtccgaggtt 6530242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 7234070 - 7234001
Alignment:
Q  17 tggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    |||||||||||| | | ||||||| ||||||||||||||||||| ||||| ||  | | |||||||||||    
T  7234070 tggctagaattcacctttttcaaggtgaataagtggggtgtccgaggttcaaaccccagcccctgcatat 7234001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 19680241 - 19680290
Alignment:
Q  20 ctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||| | | |||||||  |||||||||||||||||||||||||||    
T  19680241 ctagaattcacctttttcaaggagaataagtggggtgtccggggttcgaa 19680290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 20149953 - 20150022
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtcc-ggggttcgaa 69  Q
    ||||||||||| || || | |||||||| | | ||||||| |||||||||||||||||| ||||||||||    
T  20149953 ttgtcaagtaggctagtagatagaattcacctttttcaaggtgaataagtggggtgtccaggggttcgaa 20150022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 22182879 - 22182810
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtcc-ggggttcgaa 69  Q
    ||||||||||| || || | |||||||| | | ||||||| |||||||||||||||||| ||||||||||    
T  22182879 ttgtcaagtaggctagtagatagaattcacctttttcaaggtgaataagtggggtgtccaggggttcgaa 22182810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 6658519 - 6658585
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||| || |||||||||| | ||| |||| |||  |||||||||||||||||||||||||||    
T  6658519 ttgtcaagtagcctagtggctagaaat-tct-cttttaaggagaataagtggggtgtccggggttcgaa 6658585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10828424 - 10828360
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggtt 65  Q
    ||||||||||| ||  |||||||||||| ||| ||||||| ||||||||| | ||||||| ||||    
T  10828424 ttgtcaagtaggctattggctagaattcacttttttcaaggtgaataagtagcgtgtccgaggtt 10828360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 30566177 - 30566084
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||| ||||||| |||||| |||||| |  |||  ||| ||||||||||||||||||||||||| || |  |||| |||||||| | |||||||    
T  30566177 ttgtcaggtagtctagtggctggaattcac--cttataaggtgaataagtggggtgtccggggttcaaacttcaacctctgcatataataatgcat 30566084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 32344728 - 32344676
Alignment:
Q  33 ctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcata 85  Q
    |||| ||| |||||||||||||||||||| |||||||  | ||||||||||||    
T  32344728 ctttaaaggtgaataagtggggtgtccggagttcgaaccccaacccctgcata 32344676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 7e-19; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 20942083 - 20942191
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||||||||||| ||| ||||||||| ||| ||||||| |||||||||| |||||| |||||||||| || | ||||| ||||| |  |||||||||     
T  20942083 ttgtcaagtagtctagtgactagaattcacttttttcaaggtgaataagtgaggtgtctggggttcgaactccatcccctacatataattatgcatgtcc 20942182  T
Q  101 ctgccaact 109  Q
    |||||||||    
T  20942183 ctgccaact 20942191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 39118514 - 39118386
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||| ||||||| ||||||||||||||| | ||| |||  ||||||||||||||| |||| |||||| |||  ||||||||||| | |||| |||||     
T  39118514 ttgtcaggtagtctagtggctagaattctccttttttaaggagaataagtggggtgttcgggattcgaactctggcccctgcatataacaatgtatgtcc 39118415  T
Q  101 ctgccaactaagttacactcacgaagaca 129  Q
    || |||||| |||||| ||||||| ||||    
T  39118414 ctaccaactgagttacgctcacgaggaca 39118386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 1244683 - 1244582
Alignment:
Q  8 gtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaa 107  Q
    ||||||| ||||||||||||| | | ||||||| ||||||||||||||||||||||||||||  |  ||||||||||||   |||| ||||| |||||||    
T  1244683 gtagtctagtggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaacccccacccctgcatatagcaatgtatgtccctgccaa 1244584  T
Q  108 ct 109  Q
    ||    
T  1244583 ct 1244582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 34107395 - 34107287
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||||||||||| ||||||||||||| | | ||||||| ||||||||||||||||| || |||||||    ||||||||||||| |  || ||||||     
T  34107395 ttgtcaagtagtctagtggctagaattcacatttttcaaggtgaataagtggggtgtctggagttcgaacctcaacccctgcatataattatacatgtcc 34107296  T
Q  101 ctgccaact 109  Q
    |||||||||    
T  34107295 ctgccaact 34107287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 39334855 - 39334969
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||||||||||| ||||||||||||| | | ||||||  |||||||||||| |||| || |||||||  | | |||||| |||| | ||||||||||     
T  39334855 ttgtcaagtagtctagtggctagaattcacctttttcaaagtgaataagtgggatgtctggagttcgaaccccagcccctgtatataataatgcatgtcc 39334954  T
Q  101 ctgccaactaagtta 115  Q
    ||||||||| |||||    
T  39334955 ctgccaactgagtta 39334969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 40471273 - 40471160
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||| |||||||| |||||| ||||||| | ||| |||| ||||||||||||||| |||| ||||||  | ||||||||||||| | ||||||||||     
T  40471273 ttgtcaggtagtctg-tggctataattctcctttttgaagaagaataagtggggtgttcgggattcgaatcccaacccctgcatataataatgcatgtcc 40471175  T
Q  101 ctgccaactaagtta 115  Q
    ||| ||||| |||||    
T  40471174 ctgtcaactgagtta 40471160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 35352378 - 35352444
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcg 67  Q
    |||||||||||||| ||| ||||||||| | | ||||||| ||||||||||||||||| ||||||||    
T  35352378 ttgtcaagtagtctagtgactagaattcacatttttcaaggtgaataagtggggtgtctggggttcg 35352444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 25783225 - 25783273
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||||    
T  25783225 aagatgaataagtggggtgtccagggttcgaaccctaacccctgcatat 25783273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 32891400 - 32891307
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||| |||| || |||||||||||||   ||||  ||||||||||||||||||||||||||||||||  |  |||||||||||| | |||||||    
T  32891400 ttgtcaggtagcctagtggctagaattca--tcttataagatgaataagtggggtgtccggggttcgaaaaccgacccctgcatataataatgcat 32891307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 12206619 - 12206508
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||| |||| || ||||||||||||| | | ||||||| |||||||| ||||||| |||||||||||  |  ||||||| |||| | |||| ||||      
T  12206619 ttgtcaggtagcctagtggctagaattcacctttttcaaggtgaataagcggggtgttcggggttcgaaccccgacccctgaatataataatgtatgttc 12206520  T
Q  101 ctgccaactaag 112  Q
    ||||||||||||    
T  12206519 ctgccaactaag 12206508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 9520888 - 9520834
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||| | |||||||    
T  9520888 tgaataagtggggtgttcggggttcgaactctaacccctacatataacaatgcat 9520834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 9796981 - 9796923
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||| | |||||||    
T  9796981 aagatgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcat 9796923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 16973986 - 16973944
Alignment:
Q  44 aataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    ||||||||||||||||||||||||||  |||||||||||||||    
T  16973986 aataagtggggtgtccggggttcgaatcctaacccctgcatat 16973944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 19052622 - 19052680
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||||||||||||| |||||||||||||||  || |||||||||||| | |||||||    
T  19052622 aagatgaataagtgggatgtccggggttcgaatcctgacccctgcatataataatgcat 19052680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 25732018 - 25731960
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    ||||||||||||||||||||||| |||||||| ||  |||||||||||| | |||||||    
T  25732018 aagatgaataagtggggtgtccgaggttcgaactccgacccctgcatataataatgcat 25731960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 36413881 - 36413783
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtc 99  Q
    ||||||||||| ||  |||||| ||||| | | ||||||  |||||||||||||||||| ||||||||| ||   ||||||||||| | ||||||||||    
T  36413881 ttgtcaagtagcctaatggctaaaattcacctttttcaaagtgaataagtggggtgtccagggttcgaactccggcccctgcatataacaatgcatgtc 36413783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 42507406 - 42507344
Alignment:
Q  4 tcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttc 66  Q
    ||||||||| ||||| ||||||||| | | |||||| ||||||||||||||||||||| ||||    
T  42507406 tcaagtagtttggtgtctagaattcacctttttcaaaatgaataagtggggtgtccggtgttc 42507344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 14307683 - 14307776
Alignment:
Q  16 gtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    ||||||||||||| ||| ||| ||  |||||||||||||||| |||||||||||     |||||||||||| | |||||||||| || ||||||    
T  14307683 gtggctagaattcactttttttaaagtgaataagtggggtgttcggggttcgaacctcgacccctgcatataacaatgcatgtccctaccaact 14307776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 22355193 - 22355096
Alignment:
Q  12 tctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    ||||||||||||||||| | | || |||| ||||||||||||||||| || |||||||    |||||||||| || | ||||||||||  ||||||||    
T  22355193 tctggtggctagaattcaccttttgcaaggtgaataagtggggtgtctggagttcgaaactcaacccctgcacataacaatgcatgtccttgccaact 22355096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 29664722 - 29664629
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||| ||||||| ||||||||||||| |  |||  ||||||||||||||||||||||||| || |||  |  |||||||||||| | |||||||    
T  29664722 ttgtcaggtagtctagtggctagaattcac--cttataagatgaataagtggggtgtccgggatttgaaccccgacccctgcatataacaatgcat 29664629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 3330212 - 3330243
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  3330212 aagatgaataagtggggtgtccggggttcgaa 3330243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 17240011 - 17239927
Alignment:
Q  10 agtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||||||| |||||||| |  |||  ||||||||||||||||||||||| ||||||||  |  |||||||||||| | |||||||    
T  17240011 agtctggtggttagaattcac--cttataagatgaataagtggggtgtccgaggttcgaatcccgacccctgcatataataatgcat 17239927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 42678335 - 42678366
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  42678335 aagatgaataagtggggtgtccggggttcgaa 42678366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 10602112 - 10602019
Alignment:
Q  16 gtggctagaattc-tcttctttcaagatgaataagtggggtgtccg-gggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaac 108  Q
    ||||||||||||| |||| ||||||  ||||||||||||||||||| |||||||||  |   ||||||||||| | |||||||||| ||||||||    
T  10602112 gtggctagaattcatctt-tttcaaagtgaataagtggggtgtccgtgggttcgaaccccgtcccctgcatataacaatgcatgtctctgccaac 10602019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 11133156 - 11133102
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    ||||||||||||||||||||||||||||  |  |||||||||||| | |||||||    
T  11133156 tgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcat 11133102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 32891683 - 32891625
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||||||||||||||||| | |||||||||  | ||||||||||||| | |||||||    
T  32891683 aagatgaataagtggggtgttcagggttcgaaccccaacccctgcatataataatgcat 32891625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 44422187 - 44422133
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||||||||||||||||||||||||| ||  | |||||||||| | |||||||    
T  44422187 tgaataagtggggtgtccggggttcgaactccgatccctgcatataataatgcat 44422133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 4529778 - 4529835
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtc 99  Q
    |||||||||||||||| ||| ||||||| ||  |||||||||||| | ||||||||||    
T  4529778 tgaataagtggggtgttcggagttcgaactccgacccctgcatataataatgcatgtc 4529835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 16261407 - 16261358
Alignment:
Q  47 aagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||||||||| |||||||||| ||| |||||||||||| | |||||||    
T  16261407 aagtggggtgtctggggttcgaactctgacccctgcatataacaatgcat 16261358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 34407097 - 34407172
Alignment:
Q  34 tttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    ||||||||||||||||||||||||| ||||||||||  | ||||||||||||| | |||||||||| |||||||||    
T  34407097 tttcaagatgaataagtggggtgtctggggttcgaaccccaacccctgcatataataatgcatgtccctgccaact 34407172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 24160504 - 24160630
Alignment:
Q  3 gtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcact 102  Q
    ||||||||||||||||||||||||||   | ||| ||  ||||||||||| ||||||||||||||||  |  |||||||||||| | | |||||||| ||    
T  24160504 gtcaagtagtctggtggctagaattcaactttttgaaagtgaataagtggagtgtccggggttcgaaccccgacccctgcatataacagtgcatgtctct 24160603  T
Q  103 gccaactaagttacactcacgaagaca 129  Q
    ||||||| |||||  ||||||| ||||    
T  24160604 gccaactgagttatgctcacgaggaca 24160630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 28951967 - 28951860
Alignment:
Q  21 tagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaactaagttacactc 120  Q
    |||||||| | | ||||||| |||||||||||||||| |||||||||||  || |||||||||||| | |||||||||  ||||||||| |||||  |||    
T  28951967 tagaattcacatttttcaaggtgaataagtggggtgttcggggttcgaaccctgacccctgcatataataatgcatgtatctgccaactgagttatgctc 28951868  T
Q  121 acgaagac 128  Q
    ||| ||||    
T  28951867 acggagac 28951860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 42665904 - 42666023
Alignment:
Q  6 aagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgcc 105  Q
    ||||||||| |||  ||||||||  || ||||||| |||||||||||||||||||| ||||||| ||  |||||||||| | | ||||||| ||  ||||    
T  42665904 aagtagtctagtgattagaattcatttttttcaaggtgaataagtggggtgtccggagttcgaactccgacccctgcatttaacaatgcatatccatgcc 42666003  T
Q  106 aactaagttacactcacgaa 125  Q
    ||||||||||  ||||||||    
T  42666004 aactaagttaagctcacgaa 42666023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 24130680 - 24130566
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||||||||||| |||||||| ||||   | ||||||| ||||||||||||||||||||||||| ||  |   ||||||||||| | |||| |||||     
T  24130680 ttgtcaagtagtctagtggctagtattcaactttttcaaggtgaataagtggggtgtccggggttcaaaccccgtcccctgcatataacaatgtatgtcc 24130581  T
Q  101 ctgccaactaagtta 115  Q
    ||||||||| |||||    
T  24130580 ctgccaactgagtta 24130566  T

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Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 109
Target Start/End: Complemental strand, 51017896 - 51017803
Alignment:
Q  15 ggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    |||||||||||||| ||| ||||||  |||||||||||||||||| ||||||||| ||  || ||||||||| | |||||||||| |||||||||    
T  51017896 ggtggctagaattcacttttttcaaagtgaataagtggggtgtcc-gggttcgaactccgactcctgcatataacaatgcatgtccctgccaact 51017803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 17000049 - 16999942
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||||||||||| ||||||| ||||| |   |||||||||||||| |||||||||| || ||||||| ||   ||||| ||||| | ||||||||||     
T  17000049 ttgtcaagtagtcttgtggctacaattcacccttttcaagatgaatatgtggggtgtctggagttcgaactccggcccctacatataataatgcatgtcc 16999950  T
Q  101 ctgccaac 108  Q
    ||||||||    
T  16999949 ctgccaac 16999942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 36331702 - 36331795
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||| ||||||| ||||||||||||| ||| ||| ||| ||||||||||||||||||||||||||||  |  |||||||||||| | |||||||    
T  36331702 ttgtcaggtagtctagtggctagaattcactt-tttaaag-tgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcat 36331795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 40160853 - 40160750
Alignment:
Q  4 tcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactg 103  Q
    |||||||| || ||||||||||||| | | ||| ||| ||||||||||||||||||||||||| ||  | | |||| |||||| | |||||||||| |||    
T  40160853 tcaagtagcctagtggctagaattcacctttttaaaggtgaataagtggggtgtccggggttcaaaccccagccccggcatataacaatgcatgtccctg 40160754  T
Q  104 ccaa 107  Q
    ||||    
T  40160753 ccaa 40160750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 50724486 - 50724393
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||| |||| || ||||||||||||| ||| ||  ||| ||||||||||||||||||| ||||||||  | ||||||||||||| | |||||||    
T  50724486 ttgtcaggtagcctagtggctagaattcacttttt--aaggtgaataagtggggtgtccgaggttcgaaccccaacccctgcatataataatgcat 50724393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 50788362 - 50788455
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||| |||| || ||||||||||||| ||| ||  ||| ||||||||||||||||||| ||||||||  | ||||||||||||| | |||||||    
T  50788362 ttgtcaggtagcctagtggctagaattcacttttt--aaggtgaataagtggggtgtccgaggttcgaaccccaacccctgcatataataatgcat 50788455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 14417948 - 14417894
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||||||||||||||||||||||||| || | ||||||||||| | |||||||    
T  14417948 tgaataagtggggtgtccggggttcgaactccagcccctgcatataataatgcat 14417894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 33533324 - 33533210
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||||||||||| || | |||||||| ||| ||| ||| |||||||||||| ||||   ||||||||  | |||| || ||||| | ||||||||||     
T  33533324 ttgtcaagtagtctagttgttagaattcactttttttaaggtgaataagtgggatgtctatggttcgaaccccaaccactacatataacaatgcatgtct 33533225  T
Q  101 ctgccaactaagtta 115  Q
    ||||||||| |||||    
T  33533224 ctgccaactgagtta 33533210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 4478342 - 4478439
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgt 98  Q
    |||||| ||||||| ||||||| ||||  | | ||| |||||||||||||||| |||||||| ||||||  |  |||||||||||| | |||||||||    
T  4478342 ttgtcaggtagtctagtggctaaaatttacatttttaaagatgaataagtgggatgtccgggattcgaaccccgacccctgcatataataatgcatgt 4478439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 21248971 - 21249032
Alignment:
Q  8 gtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||| ||||||||||||| | | ||||||| |||||||||||||||| | |||||||||    
T  21248971 gtagtctagtggctagaattcacctttttcaaggtgaataagtggggtgttcagggttcgaa 21249032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 31108767 - 31108848
Alignment:
Q  34 tttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaactaagtta 115  Q
    ||||||| |||||||||||||||||  |||||||||  | | ||||||||||| |  ||||||||| ||||||||| |||||    
T  31108767 tttcaaggtgaataagtggggtgtctcgggttcgaaccccagcccctgcatataattatgcatgtccctgccaactgagtta 31108848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 47864720 - 47864675
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaagtctaacccctgca 83  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||    
T  47864720 aagatgaataagtggggtgtccggggttcgaaccccaacccctgca 47864675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 2903826 - 2903718
Alignment:
Q  4 tcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactg 103  Q
    |||||||||||  |||||||||| | | | ||||||| ||||||||| |||| ||||||||| |||  | | ||||||||||| | |||| |||||  ||    
T  2903826 tcaagtagtctaatggctagaatccacctttttcaaggtgaataagttgggtatccggggtttgaaccccagcccctgcatataacaatgtatgtccatg 2903727  T
Q  104 ccaactaag 112  Q
    |||||||||    
T  2903726 ccaactaag 2903718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 3461697 - 3461825
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtgggg-tgtccggggttcgaagtctaacccctgcatatcagaatgcatgtc 99  Q
    |||||||||||||| | || |||||||| | |  ||||| |||||||| ||||| ||| |||||||||||  | ||||||| ||||| | ||||||||||    
T  3461697 ttgtcaagtagtctagcggttagaattcaccttattcaaaatgaataaatgggggtgttcggggttcgaaccccaacccctacatataacaatgcatgtc 3461796  T
Q  100 actgccaactaagttacactcacgaagac 128  Q
     ||| ||||| |||||  |||||| ||||    
T  3461797 cctgtcaactgagttatgctcacggagac 3461825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 109
Target Start/End: Original strand, 4045628 - 4045716
Alignment:
Q  21 tagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    |||||||| | | |||||||||||||||||||||||||||  |||||||     |||||||||||| | |||||||||| ||| |||||    
T  4045628 tagaattcacctttttcaagatgaataagtggggtgtccgaagttcgaacctcgacccctgcatataacaatgcatgtccctgtcaact 4045716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 27066690 - 27066646
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    ||||||||||||||||||||||||||||  || ||||||||||||    
T  27066690 tgaataagtggggtgtccggggttcgaaccctgacccctgcatat 27066646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 36763551 - 36763491
Alignment:
Q  3 gtcaagtagtctggtggctagaa-ttctcttctttcaagatgaataagtggggtgtccggg 62  Q
    |||||||||||| |||||||||| ||| | | ||| |||||||||||||||||||||||||    
T  36763551 gtcaagtagtctagtggctagaaattcacctttttaaagatgaataagtggggtgtccggg 36763491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 47191453 - 47191385
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtcactgccaact 109  Q
    |||||||||||||||| ||||||||||| || | ||||||||||| | |||||| |||| |||||||||    
T  47191453 tgaataagtggggtgttcggggttcgaactccagcccctgcatataataatgcattgtccctgccaact 47191385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 23820735 - 23820655
Alignment:
Q  14 tggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    ||||||||||||||| |  |||  ||||||||||||||||||||| |||||||||| ||   ||||||||||| | |||||||    
T  23820735 tggtggctagaattcac--cttataagatgaataagtggggtgtctggggttcgaactccggcccctgcatataataatgcat 23820655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Complemental strand, 27471588 - 27471557
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  27471588 aagatgaataagtggggtgtccggggttcgaa 27471557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 29645838 - 29645869
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  29645838 aagatgaataagtggggtgtccggggttcgaa 29645869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 32080159 - 32080108
Alignment:
Q  18 ggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||| | | ||||||| |||||||||||||||| |||||||||||    
T  32080159 ggctagaattcacctttttcaaggtgaataagtggggtgttcggggttcgaa 32080108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 45431707 - 45431664
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcata 85  Q
    ||||||||||||||||||||||||||||  || |||||||||||    
T  45431707 tgaataagtggggtgtccggggttcgaaccctgacccctgcata 45431664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 363023 - 362969
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||||||||||| ||||||||||||| ||  |||||||||||| | |||||||    
T  363023 tgaataagtggggtatccggggttcgaactccgacccctgcatataataatgcat 362969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 13616085 - 13616143
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    ||||||||||||||||||||||| |||||||| ||  |||||| ||||| | |||||||    
T  13616085 aagatgaataagtggggtgtccgaggttcgaactccgacccctacatataataatgcat 13616143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 33206837 - 33206783
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    ||||||||||||||||||||||||||||  | | ||||||||||| | |||||||    
T  33206837 tgaataagtggggtgtccggggttcgaaccccagcccctgcatataataatgcat 33206783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 43774265 - 43774183
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtcactgccaactaagttacactcacg 123  Q
    ||||||||||||||||| ||||||||||  |  |||||||||||| | |||||| |||| ||||||||| || || |||||||    
T  43774265 tgaataagtggggtgtctggggttcgaaccccgacccctgcatataacaatgcattgtccctgccaactgagctatactcacg 43774183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 49146164 - 49146110
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    ||||||||||||||||||||||||||||  |  |||||||||||| | |||||||    
T  49146164 tgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcat 49146110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 53670351 - 53670429
Alignment:
Q  51 ggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaactaagttacactcacgaagaca 129  Q
    ||||||| |||| |||||| || ||||||||||||| | |||  ||||| |||||||||||||||  |||||| |||||    
T  53670351 ggggtgttcgggattcgaactcgaacccctgcatataacaatctatgtctctgccaactaagttatgctcacggagaca 53670429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 3955412 - 3955361
Alignment:
Q  16 gtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||| ||| ||| ||| ||||||||||||||||||||||||||||    
T  3955412 gtggctagaattcactt-tttaaag-tgaataagtggggtgtccggggttcgaa 3955361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 19137721 - 19137672
Alignment:
Q  20 ctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||| |||||||  |||||| ||||||||| ||||||||||    
T  19137721 ctagaattctcttttttcaaggagaataaatggggtgtctggggttcgaa 19137672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 28054746 - 28054787
Alignment:
Q  44 aataagtggggtgtccggggttcgaagtctaacccctgcata 85  Q
    ||||||||||||||| |||||||||| ||| |||||||||||    
T  28054746 aataagtggggtgtctggggttcgaactctgacccctgcata 28054787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 28065171 - 28065212
Alignment:
Q  44 aataagtggggtgtccggggttcgaagtctaacccctgcata 85  Q
    ||||||||||||||| |||||||||| ||| |||||||||||    
T  28065171 aataagtggggtgtctggggttcgaactctgacccctgcata 28065212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 55318115 - 55318070
Alignment:
Q  24 aattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||| ||| ||||||  ||||||||||||||||||||||||||||    
T  55318115 aattcacttttttcaaagtgaataagtggggtgtccggggttcgaa 55318070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 9625063 - 9624995
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtcactgccaact 109  Q
    ||||||||||||||||||||||||||||  |   ||||||||||| | |||||| |||| |||||||||    
T  9625063 tgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaact 9624995  T

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Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 13539981 - 13540033
Alignment:
Q  44 aataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    ||||||||||||||||||||||||||  | ||||||| ||||| | |||||||    
T  13539981 aataagtggggtgtccggggttcgaaccccaacccctacatataataatgcat 13540033  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 17262320 - 17262272
Alignment:
Q  21 tagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||||| | | ||||||| ||||||||||||||||||||| ||||||    
T  17262320 tagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaa 17262272  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 24559469 - 24559425
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    ||||||||||||||||||||||||||||  |  ||||||||||||    
T  24559469 tgaataagtggggtgtccggggttcgaaccccgacccctgcatat 24559425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 27183696 - 27183764
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtcactgccaact 109  Q
    ||||||||||||||||||||||||||||  |   ||||||||||| | |||||| |||| |||||||||    
T  27183696 tgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaact 27183764  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 40956661 - 40956729
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||||||||| | |||| |||||||| | | ||| ||| ||||||| || |||||||||||||||||    
T  40956661 ttgtcaagtagtttagtggttagaattcaccttttttaagctgaataaatgaggtgtccggggttcgaa 40956729  T

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Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 42935524 - 42935476
Alignment:
Q  18 ggctagaattctcttctttcaagatgaataagtggggtgtccggggttc 66  Q
    ||||||||||||| | |||||||  |||||||||||||||| |||||||    
T  42935524 ggctagaattctcatttttcaaggagaataagtggggtgtctggggttc 42935476  T

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Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 50381798 - 50381750
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    ||||||||||||||||||||||||| ||||||  |  ||||||||||||    
T  50381798 aagatgaataagtggggtgtccgggattcgaaccccgacccctgcatat 50381750  T

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Target: chr1 (Bit Score: 48; Significance: 3e-18; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 43020732 - 43020625
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||||||||  | ||||||||||||| | | ||||||| ||||| ||||||||||||| ||||||||  | ||||||||||||| | ||||||||||     
T  43020732 ttgtcaagtagcgtagtggctagaattcacatttttcaaggtgaatgagtggggtgtccgaggttcgaaccccaacccctgcatataataatgcatgtcc 43020633  T
Q  101 ctgccaac 108  Q
    ||||||||    
T  43020632 ctgccaac 43020625  T

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Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 9768801 - 9768891
Alignment:
Q  19 gctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    |||||||||| | | ||||||| ||||||||||||||||||||||||||||  |  |||||||||||| | |||||||||| |||||||||    
T  9768801 gctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccctgccaact 9768891  T

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Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 2903003 - 2903115
Alignment:
Q  3 gtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcact 102  Q
    ||||||||  || ||||||||||||||| | ||||||| |||||||||||||||| |||||||||||  |  ||| |||||||| | |||||||||| ||    
T  2903003 gtcaagtaacctagtggctagaattctcctttttcaaggtgaataagtggggtgttcggggttcgaaccccgacctctgcatataacaatgcatgtccct 2903102  T
Q  103 gccaactaagtta 115  Q
    | ||||| |||||    
T  2903103 ggcaactgagtta 2903115  T

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Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 23973456 - 23973552
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatg 97  Q
    |||||||||||||| ||||||||||||| | | ||||||  |||||||||||||||| |||||||||||  | ||||| ||||||| | ||||||||    
T  23973456 ttgtcaagtagtctagtggctagaattcacatttttcaacgtgaataagtggggtgtacggggttcgaatcccaacccttgcatataataatgcatg 23973552  T

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Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 3341725 - 3341818
Alignment:
Q  16 gtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    ||||||||||||| | | ||||||| |||||||||||||||||||||||||||   |   ||||||||||| | |||||||||| |||||||||    
T  3341725 gtggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgatccccggcccctgcatataataatgcatgtccctgccaact 3341818  T

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Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 9769569 - 9769662
Alignment:
Q  16 gtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    |||| |||||||| | | ||||||| ||||||||||||||||||||||||||||  | || |||| ||||| | |||||||||| |||||||||    
T  9769569 gtggttagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccaatccctacatataataatgcatgtccctgccaact 9769662  T

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Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 11238019 - 11238100
Alignment:
Q  18 ggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtc 99  Q
    ||||||||||| | | ||||||||||||||||||||||||||||| ||||||  |  |||||||||||| | ||||||||||    
T  11238019 ggctagaattcacctttttcaagatgaataagtggggtgtccgggattcgaaccccgacccctgcatataataatgcatgtc 11238100  T

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Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 13941440 - 13941332
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa-gtctaacccctgcatatcagaatgcatgtc 99  Q
    |||||||||||| | |||| |||||||| ||| |||||||||||||||||||||||||||  |||||||  || || |||||||||| | ||||||||||    
T  13941440 ttgtcaagtagtttagtggttagaattcacttttttcaagatgaataagtggggtgtccgaagttcgaacctcgaa-ccctgcatataacaatgcatgtc 13941342  T
Q  100 actgccaact 109  Q
      ||||||||    
T  13941341 cttgccaact 13941332  T

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Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 42908877 - 42908784
Alignment:
Q  16 gtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    |||| |||||||||| | |||||||| ||||||||||||| ||||| |||||||  |  |||||||||||| | |||||||||| |||||||||    
T  42908877 gtggttagaattctcctttttcaagaagaataagtggggtatccggagttcgaaccccgacccctgcatataacaatgcatgtccctgccaact 42908784  T

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Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 18179447 - 18179335
Alignment:
Q  3 gtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcact 102  Q
    |||| ||||||| ||||||||||||||| | |||||||  |||||||  ||||||| |||||||||| ||    |||||||||| | |||||||||| ||    
T  18179447 gtcaggtagtctagtggctagaattctcctttttcaaggagaataagcagggtgtctggggttcgaactccggtccctgcatataacaatgcatgtccct 18179348  T
Q  103 gccaactaagtta 115  Q
    ||||||| |||||    
T  18179347 gccaactgagtta 18179335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33844738 - 33844670
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||||||||||| ||||||| ||||| | | ||||||  ||||||||||||||||||||||||||||    
T  33844738 ttgtcaagtagtctagtggctataattcacctttttcaaagtgaataagtggggtgtccggggttcgaa 33844670  T

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Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 33949240 - 33949308
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||||||||||| ||||||| ||||| | | ||||||  ||||||||||||||||||||||||||||    
T  33949240 ttgtcaagtagtctagtggctataattcacctttttcaaagtgaataagtggggtgtccggggttcgaa 33949308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 50199452 - 50199564
Alignment:
Q  3 gtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcact 102  Q
    |||| |||| || ||||||||||||  | | ||||||| ||||||||||||||||||||||||||||  |   ||||||||||| | |||||||||| ||    
T  50199452 gtcaggtagcctagtggctagaattgacctttttcaaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcatgtccct 50199551  T
Q  103 gccaactaagtta 115  Q
     |||||| |||||    
T  50199552 accaactgagtta 50199564  T

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Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 16182897 - 16182822
Alignment:
Q  34 tttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    |||||||||||||||||||||||||||||||| |||  | | ||||| ||||| | |||||||||| |||||||||    
T  16182897 tttcaagatgaataagtggggtgtccggggtttgaaccccagcccctacatataataatgcatgtctctgccaact 16182822  T

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Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 41677166 - 41677059
Alignment:
Q  16 gtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaactaagtta 115  Q
    ||||||||||||| | | ||||||| |||||||||||||||||||| |||||||  |  ||||| |||||| | |||| ||||| ||||||||| || ||    
T  41677166 gtggctagaattcacctttttcaaggtgaataagtggggtgtccggagttcgaaccccgacccccgcatataataatgaatgtctctgccaactgagcta 41677067  T
Q  116 cactcacg 123  Q
    | ||||||    
T  41677066 cgctcacg 41677059  T

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Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 1576095 - 1576209
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||||||||| | |||  |||||||| ||| ||||||| | |||||||||||||||||||||| |||  |   ||||||||||| | || |||| ||     
T  1576095 ttgtcaagtagtttagtgattagaattcacttttttcaaggtaaataagtggggtgtccggggtttgaatcccggcccctgcatataataaagcatatcc 1576194  T
Q  101 ctgccaactaagtta 115  Q
    |||||||||||||||    
T  1576195 ctgccaactaagtta 1576209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 9976373 - 9976426
Alignment:
Q  16 gtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||    
T  9976373 gtggctagaattcacttttttcaaggtgaataagtggggtgtccggagttcgaa 9976426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 48260179 - 48260231
Alignment:
Q  17 tggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||||||||| | | ||||||| ||||||||||||||||||||||||||||    
T  48260179 tggctagaattcacatttttcaaggtgaataagtggggtgtccggggttcgaa 48260231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 2643789 - 2643900
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||| ||||||| |||| |||| ||| | | ||| ||| ||||||||||||||||| ||||||| ||  |  |||| ||||||| | ||||||||||     
T  2643789 ttgtcaggtagtctagtggttagagttcacattttttaaggtgaataagtggggtgtctggggttcaaaccccgacccatgcatataataatgcatgtct 2643888  T
Q  101 ctgccaactaag 112  Q
    ||||||||||||    
T  2643889 ctgccaactaag 2643900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 32635260 - 32635176
Alignment:
Q  1 ttgtcaagtagtctggtggctagaa-ttctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    ||||||||||| || |||||||||| ||| | ||||  ||| ||||||||||||||||||||||||||||  | |||||||||||||    
T  32635260 ttgtcaagtagcctagtggctagaaattcacctctt--aaggtgaataagtggggtgtccggggttcgaaccccaacccctgcatat 32635176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 35424259 - 35424193
Alignment:
Q  3 gtcaagtagtctggtggctagaattc-tcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||||||||| ||||||||||||| |||| ||||||| ||||||| |||||| |||||||||||||    
T  35424259 gtcaagtagtctagtggctagaattcatctt-tttcaaggtgaataaatggggtatccggggttcgaa 35424193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 9527545 - 9527438
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtc 99  Q
    |||||| ||||||| ||||||||||||| |  |||  |||||||||||||||||||||| |||||| ||  |  |||||||||||| | |||||| ||||    
T  9527545 ttgtcaggtagtctagtggctagaattcac--cttataagatgaataagtggggtgtccagggttcaaaccccgacccctgcatataacaatgcattgtc 9527448  T
Q  100 actgccaact 109  Q
     |||||||||    
T  9527447 cctgccaact 9527438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 12553313 - 12553247
Alignment:
Q  3 gtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||| |||| || ||||||||||||| | | ||||||  ||||||||||||||||||||||||||||    
T  12553313 gtcaggtagcctagtggctagaattcacctttttcaaagtgaataagtggggtgtccggggttcgaa 12553247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 48110613 - 48110555
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||||||||||| |||||||| |||||||| || ||||||||||||| | |||||||    
T  48110613 aagatgaataagtgaggtgtccgaggttcgaactccaacccctgcatataataatgcat 48110555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 195165 - 195044
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||||||||  | |||| |||||||| | | ||||||| ||||||||||||||||| ||||| ||||    | ||||||||||| |  |||||||||     
T  195165 ttgtcaagtagcttagtggttagaattcacctttttcaaggtgaataagtggggtgtctggggtacgaacctcagcccctgcatataattatgcatgtcc 195066  T
Q  101 ctgccaactaagttacactcac 122  Q
    ||||||||| || ||| |||||    
T  195065 ctgccaactgagctacgctcac 195044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 18003922 - 18003829
Alignment:
Q  16 gtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    ||||||||||||| | | |||| || |||||||||||||||| ||||| |||||  |   ||||||||||| | |||||||||| |||||||||    
T  18003922 gtggctagaattcacctttttccaggtgaataagtggggtgttcggggctcgaaccccggcccctgcatataacaatgcatgtccctgccaact 18003829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 23758226 - 23758335
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaat-aagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtc 99  Q
    |||||||||||||| |||| |||||||| |   ||| ||||||||| ||||||||||| |||||||||||    ||||||||||||| | |||||| ||     
T  23758226 ttgtcaagtagtctagtggttagaattcacaatttttaagatgaataaagtggggtgttcggggttcgaacctcaacccctgcatataataatgcacgtt 23758325  T
Q  100 actgccaact 109  Q
     |||||||||    
T  23758326 tctgccaact 23758335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 9410302 - 9410409
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||||||||| | || | || ||||| | | ||||||||||||||||||||||||| | |||||||| ||| | |||||||||| |  |||||||||     
T  9410302 ttgtcaagtagtttagtagttaaaattcacctttttcaagatgaataagtggggtgtctgaggttcgaa-tctcaaccctgcatataactatgcatgtcc 9410400  T
Q  101 ctgccaact 109  Q
     ||||||||    
T  9410401 ttgccaact 9410409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19866596 - 19866536
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccgg 61  Q
    |||||||||||| | ||||||||||||| | | ||| ||| ||||||||||||||||||||    
T  19866596 ttgtcaagtagtttagtggctagaattcaccttttttaaggtgaataagtggggtgtccgg 19866536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 29491550 - 29491482
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtcactgccaact 109  Q
    ||||||||||||||||||||||||||||  |  |||||||||||| | |||||| |||| |||||||||    
T  29491550 tgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccctgccaact 29491482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 5684201 - 5684135
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    ||||||||||||||||| | ||||| ||  ||||||||||||||| | |||||||||| |||||||||    
T  5684201 tgaataagtggggtgtctgaggttc-aatcctaacccctgcatataataatgcatgtctctgccaact 5684135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 9931208 - 9931094
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctc-ttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtc 99  Q
    |||||||||||||| || | |||||||| | |||||| ||| ||||||||||||||||  |||||||||| || | | | ||||||| | ||||||||||    
T  9931208 ttgtcaagtagtctagtagttagaattcaccttcttt-aaggtgaataagtggggtgtttggggttcgaactccagctcttgcatataataatgcatgtc 9931110  T
Q  100 actgccaactaagtta 115  Q
     |||| |||| |||||    
T  9931109 cctgctaactgagtta 9931094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 24134635 - 24134666
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  24134635 aagatgaataagtggggtgtccggggttcgaa 24134666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 35309808 - 35309761
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaagtctaacccctgcata 85  Q
    |||||||||||||||||||| ||||||||||  || ||||||||||||    
T  35309808 aagatgaataagtggggtgttcggggttcgacctccaacccctgcata 35309761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 43237858 - 43237799
Alignment:
Q  37 caagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||||||||| ||||||||| | |||||||| ||| |||||||||||| | |||||||    
T  43237858 caagatgaataactggggtgtctgtggttcgaactctgacccctgcatataataatgcat 43237799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 11405536 - 11405482
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    ||||||||||||||||||||||||||||  |  |||||||||||| | |||||||    
T  11405536 tgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcat 11405482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 17350141 - 17350059
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtcactgccaactaagttacactcacg 123  Q
    ||||||||||||||||||||||||||||  |   ||||||||||| | |||||| |||| ||||||||| || || |||||||    
T  17350141 tgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatactcacg 17350059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 19793606 - 19793552
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||||||||||||||||||||||||| ||   ||||||||||| | |||||||    
T  19793606 tgaataagtggggtgtccggggttcgaattccggcccctgcatataataatgcat 19793552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 29936687 - 29936737
Alignment:
Q  33 ctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgca 83  Q
    |||| |||||||||||||||||||||||| ||||||| ||  |||||||||    
T  29936687 cttttaagatgaataagtggggtgtccggagttcgaactccgacccctgca 29936737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 38021332 - 38021278
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||||||||||||||||||||||||| ||   ||||||||||| | |||||||    
T  38021332 tgaataagtggggtgtccggggttcgaactccggcccctgcatataataatgcat 38021278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 38028658 - 38028544
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    ||||||||||| || || | |||||||| | | ||||||| |||||||||||||||||  ||||||||| ||   |||  |||||| | ||||||||||     
T  38028658 ttgtcaagtagcctagtagttagaattcacatttttcaaggtgaataagtggggtgtctagggttcgaactccggccctagcatataacaatgcatgtcc 38028559  T
Q  101 ctgccaactaagtta 115  Q
     || |||||||||||    
T  38028558 ttgtcaactaagtta 38028544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 68
Target Start/End: Original strand, 49239858 - 49239888
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcga 68  Q
    |||||||||||||||||||||||||||||||    
T  49239858 aagatgaataagtggggtgtccggggttcga 49239888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 1721261 - 1721164
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgt 98  Q
    ||||||||||| ||   ||||||||||| | | ||| ||| |||||||||| |||||||||||||||||  |   ||||||||||| | |||||||||    
T  1721261 ttgtcaagtagcctaacggctagaattcaccttttttaaggtgaataagtgaggtgtccggggttcgaaacccggcccctgcatataacaatgcatgt 1721164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 7906315 - 7906408
Alignment:
Q  16 gtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    ||||||||||||| | | ||| ||| | |||||| ||||||||| |||||||||  | | ||||||||||| | |||||||||| || ||||||    
T  7906315 gtggctagaattcacattttttaaggtcaataagcggggtgtcccgggttcgaaccccagcccctgcatataacaatgcatgtccctaccaact 7906408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 1031667 - 1031623
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    |||||||||||||||| ||||||||||| ||| |||||| |||||    
T  1031667 tgaataagtggggtgttcggggttcgaactctgacccctacatat 1031623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 4288694 - 4288611
Alignment:
Q  16 gtggctagaattc-tcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtc 99  Q
    ||||||||||||| |||| ||| ||| ||||||| || |||||| |||||||||| ||| |||||||||||| | |||| |||||    
T  4288694 gtggctagaattcatctttttt-aaggtgaataaatgaggtgtctggggttcgaactctgacccctgcatataataatgtatgtc 4288611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 14262732 - 14262780
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    ||||||||||||| ||||||||||||||||||  |  ||||||||||||    
T  14262732 aagatgaataagtagggtgtccggggttcgaaccccgacccctgcatat 14262780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 69
Target Start/End: Complemental strand, 15368886 - 15368858
Alignment:
Q  41 atgaataagtggggtgtccggggttcgaa 69  Q
    |||||||||||||||||||||||||||||    
T  15368886 atgaataagtggggtgtccggggttcgaa 15368858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 19424126 - 19424082
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    ||||||||||||||||||||||||||||  |  ||||||||||||    
T  19424126 tgaataagtggggtgtccggggttcgaaccccgacccctgcatat 19424082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 27654997 - 27655045
Alignment:
Q  19 gctagaattctcttctttcaagatgaataagtggggtgtccggggttcg 67  Q
    |||||||||| | | ||||||| ||||||||||||||||| ||||||||    
T  27654997 gctagaattcacctttttcaaggtgaataagtggggtgtctggggttcg 27655045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 41998218 - 41998150
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||||||||  | ||||||||||||| | | ||||||  ||||||||||||||||| | ||||||||    
T  41998218 ttgtcaagtagcgtagtggctagaattcgcctttttcaatgtgaataagtggggtgtctgtggttcgaa 41998150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 220338 - 220444
Alignment:
Q  3 gtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcact 102  Q
    |||||||||||| |||| |||||||| | | ||||||| ||||||||||||||||||||| ||||||  || ||| |||||||| | | |||||||| ||    
T  220338 gtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccct 220437  T
Q  103 gccaact 109  Q
    |||||||    
T  220438 gccaact 220444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 689493 - 689599
Alignment:
Q  3 gtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcact 102  Q
    |||||||||||| |||| |||||||| | | ||||||| ||||||||||||||||||||| ||||||  || ||| |||||||| | | |||||||| ||    
T  689493 gtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccct 689592  T
Q  103 gccaact 109  Q
    |||||||    
T  689593 gccaact 689599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 733961 - 734067
Alignment:
Q  3 gtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcact 102  Q
    |||||||||||| |||| |||||||| | | ||||||| ||||||||||||||||||||| ||||||  || ||| |||||||| | | |||||||| ||    
T  733961 gtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccct 734060  T
Q  103 gccaact 109  Q
    |||||||    
T  734061 gccaact 734067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 857857 - 857963
Alignment:
Q  3 gtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcact 102  Q
    |||||||||||| |||| |||||||| | | ||||||| ||||||||||||||||||||| ||||||  || ||| |||||||| | | |||||||| ||    
T  857857 gtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccct 857956  T
Q  103 gccaact 109  Q
    |||||||    
T  857957 gccaact 857963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 14011027 - 14011120
Alignment:
Q  16 gtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    |||| |||||||| | | ||| |||||||||||||||| |||||| |||||||| ||   ||||||||||| | |||||||||| |||||||||    
T  14011027 gtggttagaattcacattttttaagatgaataagtgggatgtccgaggttcgaactccggcccctgcatataacaatgcatgtccctgccaact 14011120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 4798519 - 4798583
Alignment:
Q  3 gtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||| ||||||| ||||||||||||| |  ||| |||| ||||||||||||||||||||||||||||    
T  4798519 gtcaggtagtctagtggctagaattcac--cttacaaggtgaataagtggggtgtccggggttcgaa 4798583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 12926457 - 12926520
Alignment:
Q  6 aagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||| ||||||||||||  | | |||||||||||||||||| |||||||||| ||||||    
T  12926457 aagtagtctagtggctagaatttacctttttcaagatgaataagtgaggtgtccgggattcgaa 12926520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 22847236 - 22847345
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||| ||||||  ||||||||||||| | | ||| ||| |||||||||| |||||  ||||||||||     |||||||||||| | ||||||||||     
T  22847236 ttgtcatgtagtcaagtggctagaattcaccttttttaaggtgaataagtgaggtgtgtggggttcgaacctcgacccctgcatataacaatgcatgtcc 22847335  T
Q  101 ctgccaacta 110  Q
    ||||||||||    
T  22847336 ctgccaacta 22847345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 35779874 - 35779806
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattc-tcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||||||||| | | ||||||||||| |||| ||||||||||||||||||||||||||  ||||||||    
T  35779874 ttgtcaagtagtttagaggctagaattcatctt-tttcaagatgaataagtggggtgtcctaggttcgaa 35779806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 39208843 - 39208907
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggtt 65  Q
    |||||||||||||| ||||||||||||| | | ||| ||| |||||||||| |||||||| ||||    
T  39208843 ttgtcaagtagtctagtggctagaattcacctttttaaaggtgaataagtgaggtgtccgaggtt 39208907  T

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Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Complemental strand, 3311524 - 3311493
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  3311524 aagatgaataagtggggtgtccggggttcgaa 3311493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 69
Target Start/End: Complemental strand, 17467365 - 17467330
Alignment:
Q  34 tttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||| ||||||||||||||||||||||||||||    
T  17467365 tttcaaggtgaataagtggggtgtccggggttcgaa 17467330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 25470825 - 25470888
Alignment:
Q  6 aagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||| ||||||||||||| | |  |||||| ||||||| ||||||||||| ||||||||    
T  25470825 aagtagtctagtggctagaattcaccttcttcaaggtgaataaatggggtgtccgaggttcgaa 25470888  T

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Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 39432343 - 39432410
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    ||||||||||||||||| | ||||||||  | ||||||||||||| | | |||||||| |||||||||    
T  39432343 tgaataagtggggtgtctgaggttcgaaccccaacccctgcatataacattgcatgtccctgccaact 39432410  T

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Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 41454838 - 41454869
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  41454838 aagatgaataagtggggtgtccggggttcgaa 41454869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Complemental strand, 45536802 - 45536771
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  45536802 aagatgaataagtggggtgtccggggttcgaa 45536771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 2696613 - 2696539
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtcactgccaactaagtta 115  Q
    ||||||||||||||||||||||||||||  |   ||||||||||| | |||||| |||| ||||||||| |||||    
T  2696613 tgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagtta 2696539  T

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Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 7345529 - 7345435
Alignment:
Q  21 tagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaactaagtta 115  Q
    |||||||| | | ||| ||| ||||||||||||||||  || ||| |||| |  |||||||||||| | |||||||||| ||||||||| |||||    
T  7345529 tagaattcaccttttttaaggtgaataagtggggtgtttggagttggaagcccgacccctgcatataataatgcatgtccctgccaactgagtta 7345435  T

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Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 13762527 - 13762581
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    ||||||||||||||||||| ||||||||  || |||||||||||| | |||||||    
T  13762527 tgaataagtggggtgtccgtggttcgaacactgacccctgcatataataatgcat 13762581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 34073222 - 34073281
Alignment:
Q  8 gtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||| ||||||||||||| |  |||  ||| ||||||||||||||||||||||||||||    
T  34073222 gtagtctcgtggctagaattcac--cttataaggtgaataagtggggtgtccggggttcgaa 34073281  T

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Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 36359694 - 36359777
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    |||||| ||||||| ||||||||||||| |  |||  ||| ||||||||||||||||||||| |||||| ||   |||||||||||    
T  36359694 ttgtcaggtagtctagtggctagaattcac--cttataaggtgaataagtggggtgtccgggattcgaactccggcccctgcatat 36359777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 28979106 - 28979049
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtc 99  Q
    |||||||||| ||||||||||||||||| ||  |||||| ||||| | ||||||||||    
T  28979106 tgaataagtgaggtgtccggggttcgaattccgacccctacatataacaatgcatgtc 28979049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 33570405 - 33570471
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||||||||| | ||||||||||||| |  |||  ||| ||||||||||||||||||| ||||||||    
T  33570405 ttgtcaagtagtttagtggctagaattcac--cttataaggtgaataagtggggtgtccgaggttcgaa 33570471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 37154633 - 37154523
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtc 99  Q
    |||||| ||||||| ||| ||||||||| |  |||  ||| ||||||| |||||||||| ||||||||| ||  |||||||||||| |  ||||| ||||    
T  37154633 ttgtcaggtagtctagtgcctagaattcac--cttataaggtgaataaatggggtgtccagggttcgaattccgacccctgcatataacgatgcattgtc 37154536  T
Q  100 actgccaactaag 112  Q
     ||||||||||||    
T  37154535 tctgccaactaag 37154523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 69
Target Start/End: Original strand, 1360148 - 1360176
Alignment:
Q  41 atgaataagtggggtgtccggggttcgaa 69  Q
    |||||||||||||||||||||||||||||    
T  1360148 atgaataagtggggtgtccggggttcgaa 1360176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 2800099 - 2800031
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtcactgccaact 109  Q
    ||||||||||||||||||||||||||||  |   ||||||||||| | |||||| |||| |||||||||    
T  2800099 tgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaact 2800031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 8350520 - 8350472
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    ||||||||||||||||||||||| |||||||| ||   |||||||||||    
T  8350520 aagatgaataagtggggtgtccgaggttcgaactccggcccctgcatat 8350472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 16935675 - 16935623
Alignment:
Q  34 tttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    ||||||| ||||||||||||||||| ||||||||||  | |||||||| ||||    
T  16935675 tttcaagttgaataagtggggtgtctggggttcgaaccccaacccctgtatat 16935623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 69
Target Start/End: Original strand, 43456666 - 43456694
Alignment:
Q  41 atgaataagtggggtgtccggggttcgaa 69  Q
    |||||||||||||||||||||||||||||    
T  43456666 atgaataagtggggtgtccggggttcgaa 43456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 31556924 - 31556836
Alignment:
Q  16 gtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgc 104  Q
    ||||||||||||| |   ||||||| |||||||||||||||||||||||||||| ||  |||||||||||| | |||||||||| ||||    
T  31556924 gtggctagaattcacccttttcaaggtgaataagtggggtgtccggggttcgaactccgacccctgcatataacaatgcatgtccctgc 31556836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 10106749 - 10106643
Alignment:
Q  3 gtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcact 102  Q
    ||||||||| ||  |||||||||||  | | |||||||||||||||||||||||||||||||||||| | |  ||||| ||||| | |||| ||||| ||    
T  10106749 gtcaagtagcctaatggctagaatttgcctttttcaagatgaataagtggggtgtccggggttcgaactttggcccctacatataataatggatgtccct 10106650  T
Q  103 gccaact 109  Q
    |||||||    
T  10106649 gccaact 10106643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 41539435 - 41539337
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtc 99  Q
    ||||||| |||||| ||| ||||||||| | | ||||||||| ||||||||||||||| |||||||||| |  ||||||||||||| |  |||||||||    
T  41539435 ttgtcaaatagtctagtgactagaattcacctttttcaagattaataagtggggtgtctggggttcgaactacaacccctgcatataattatgcatgtc 41539337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 20186985 - 20186879
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||||||||||||| |||| || ||||| ||| ||||||| ||||||||||||||||| ||||||  ||  |  |||||||||||| | ||||||||||     
T  20186985 ttgtcaagtagtctagtggttataattcacttttttcaaggtgaataagtggggtgtctggggtt--aaccccgacccctgcatataataatgcatgtcc 20186888  T
Q  101 ctgccaact 109  Q
    |||||||||    
T  20186887 ctgccaact 20186879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 11246468 - 11246576
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    |||| ||||||||| ||||||||||||| | | ||||||| |||||||||||| |||| |||||| ||   |  |||||||||||| | ||||||||||     
T  11246468 ttgttaagtagtctagtggctagaattcacctttttcaagctgaataagtgggatgtctggggtttgagccccgacccctgcatataacaatgcatgtcc 11246567  T
Q  101 ctgccaact 109  Q
    |||||||||    
T  11246568 ctgccaact 11246576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 13862245 - 13862151
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||| |||| || |||| |||||||||| | |||||||| ||||||||||||||||| ||||||||| ||  |||||||||||| | |||||||    
T  13862245 ttgtcaggtagcctagtggttagaattctcctttttcaagaagaataagtggggtgtcc-gggttcgaactccgacccctgcatataacaatgcat 13862151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 29629921 - 29629987
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||||||||||||||||||||||||| |  |||  |||||||||||||| ||||||| |||||||||    
T  29629921 ttgtcaagtagtctggtggctagaattcac--cttataagatgaataagtgaggtgtccagggttcgaa 29629987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 3535910 - 3535978
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||| |||| || |||| |||||||| ||| ||| ||| ||||||||||||||||||||||||||||    
T  3535910 ttgtcaggtagcctagtggttagaattcactttttttaaggtgaataagtggggtgtccggggttcgaa 3535978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 23925662 - 23925569
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||||||||||| ||||||||||||| |  |||  |||||||||||||||||| |||||| ||||||  |  |||||||||||| | |||||||    
T  23925662 ttgtcaagtagtctagtggctagaattcac--cttataagatgaataagtggggtatccgggattcgaacccagacccctgcatataataatgcat 23925569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 28537256 - 28537188
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||| || ||||||||||||| |   ||||||  ||||||||||||||||||||||||||||    
T  28537256 ttgtcaagtagcctagtggctagaattcaccattttcaaagtgaataagtggggtgtccggggttcgaa 28537188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 35813217 - 35813324
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    ||||||||||| || ||||||||||||| | | |||||| | ||||||||||||||||| |||||||||    | ||||||||||| | ||||||||||     
T  35813217 ttgtcaagtagcctagtggctagaattcacctttttcaa-aggaataagtggggtgtcctgggttcgaacctgagcccctgcatataacaatgcatgtcc 35813315  T
Q  101 ctgccaact 109  Q
    ||| |||||    
T  35813316 ctgtcaact 35813324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 37986844 - 37986936
Alignment:
Q  4 tcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||||| || ||||||||||||| | | ||||||| |||||||||||| |||||||||||| || ||  ||| |||||||| | |||||||    
T  37986844 tcaagtagcctagtggctagaattcacctttttcaaggtgaataagtgggatgtccggggttcaaactccgacctctgcatataataatgcat 37986936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 69
Target Start/End: Original strand, 22396995 - 22397030
Alignment:
Q  34 tttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||||||    
T  22396995 tttcaagatgaataagtggggtgtccggggttcgaa 22397030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 17557150 - 17557037
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    ||||||||||||||||||   ||||||  ||| ||| ||| |||||||||||||||||| ||||| |||  |  |||||| ||||| | ||||||||||     
T  17557150 ttgtcaagtagtctggtgatcagaattaactttttttaaggtgaataagtggggtgtcc-gggtttgaaccccgacccctacatataacaatgcatgtct 17557052  T
Q  101 ctgccaactaagtta 115  Q
    ||||||||| |||||    
T  17557051 ctgccaactgagtta 17557037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 40384367 - 40384274
Alignment:
Q  6 aagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtc 99  Q
    ||||||| | ||||||||||||| | | ||| ||| |||||||||||||||||||| |||||||  | | || |||||||| | ||||||||||    
T  40384367 aagtagtttagtggctagaattcaccttttttaaggtgaataagtggggtgtccggagttcgaaccccagccgctgcatataataatgcatgtc 40384274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 22687862 - 22687934
Alignment:
Q  8 gtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccct 80  Q
    ||||||| |||| |||||||| | | ||||||| |||||||||||||||| |||||||| || || |||||||    
T  22687862 gtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgttcggggttcaaactccaacccct 22687934  T

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Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 27095510 - 27095578
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||||||||||| ||||||||||||| | | |||  |||||||||| || |||||| ||||||||||    
T  27095510 ttgtcaagtagtctagtggctagaattcacattttttcagatgaataaatgaggtgtctggggttcgaa 27095578  T

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Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 29561769 - 29561701
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||| |||| | |||| |||||||| | | |||||||||||||||||||| |||| ||||||||||    
T  29561769 ttgtcaactagtttagtggttagaattcacctttttcaagatgaataagtgggatgtctggggttcgaa 29561701  T

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Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 15106898 - 15106929
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  15106898 aagatgaataagtggggtgtccggggttcgaa 15106929  T

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Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Complemental strand, 17077445 - 17077414
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  17077445 aagatgaataagtggggtgtccggggttcgaa 17077414  T

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Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Complemental strand, 31250231 - 31250200
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  31250231 aagatgaataagtggggtgtccggggttcgaa 31250200  T

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Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 38503268 - 38503299
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  38503268 aagatgaataagtggggtgtccggggttcgaa 38503299  T

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Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Complemental strand, 43227950 - 43227919
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  43227950 aagatgaataagtggggtgtccggggttcgaa 43227919  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 4674830 - 4674884
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    ||||||||||||||||||||||||||||  |  |||||||||||| | |||||||    
T  4674830 tgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcat 4674884  T

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Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 115
Target Start/End: Original strand, 9408965 - 9409039
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtcactgccaactaagtta 115  Q
    ||||||| || ||||||||||||||||| ||  |||||||||||| | |||||| |||| ||||||||| |||||    
T  9408965 tgaataaatgaggtgtccggggttcgaactccgacccctgcatataacaatgcattgtccctgccaactgagtta 9409039  T

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Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 36045149 - 36045203
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    ||||||||||||||||||||||||||||  |  |||||||||||| | |||||||    
T  36045149 tgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcat 36045203  T

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Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 42801452 - 42801510
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||||||||||| |||||||||||||||||  |  |||||||||||| | |||||||    
T  42801452 aagatgaataagtgaggtgtccggggttcgaaccccgacccctgcatataataatgcat 42801510  T

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Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 10943820 - 10943769
Alignment:
Q  16 gtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||| ||| ||| ||| ||||||||||||||||||||||||||||    
T  10943820 gtggctagaattcactt-tttaaag-tgaataagtggggtgtccggggttcgaa 10943769  T

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Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 27006461 - 27006356
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtca 100  Q
    ||||||||||| ||   ||||||||||| | | ||||||| ||||||||||| |||||||| |||||||  |  ||||| |||||| | |||||||| |     
T  27006461 ttgtcaagtagcctaacggctagaattcacctttttcaaggtgaataagtggagtgtccggagttcgaaccccgaccccagcatataacaatgcatgccc 27006362  T
Q  101 ctgcca 106  Q
    ||||||    
T  27006361 ctgcca 27006356  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 29096284 - 29096350
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||| |||| || ||||||||||||| |  |||  ||| ||||||||||||||||||||||||||||    
T  29096284 ttgtcaggtagcctagtggctagaattcac--cttataaggtgaataagtggggtgtccggggttcgaa 29096350  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 1244742 - 1244786
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    ||||||||||||||||| ||||||||||  || ||||||||||||    
T  1244742 tgaataagtggggtgtctggggttcgaaccctgacccctgcatat 1244786  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 1463951 - 1463883
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtcactgccaact 109  Q
    ||||||||||||||||||||||||||||  |   ||||||||||| | |||||| |||| |||||||||    
T  1463951 tgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaact 1463883  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 2411305 - 2411353
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    ||||||||||||||||||||| |||||||||| ||   |||||||||||    
T  2411305 aagatgaataagtggggtgtctggggttcgaactccggcccctgcatat 2411353  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 6806655 - 6806723
Alignment:
Q  42 tgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtcactgccaact 109  Q
    ||||||||||| ||||||||||||||||  |  |||||||||||| | |||||| |||| |||||||||    
T  6806655 tgaataagtggagtgtccggggttcgaatcccgacccctgcatataacaatgcattgtctctgccaact 6806723  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 109
Target Start/End: Original strand, 40250171 - 40250259
Alignment:
Q  21 tagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    |||||||||||| ||||||   |||||||| |||||| || ||||||||  |  || ||||||||| | ||||||||| ||||||||||    
T  40250171 tagaattctcttttttcaatgagaataagtagggtgttcgaggttcgaaccccgactcctgcatataacaatgcatgttactgccaact 40250259  T

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Target: scaffold0119 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 1160 - 1092
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    |||||||||||| | ||||||||||||| | | ||||||| ||||||||||||||||| ||||||||||    
T  1160 ttgtcaagtagtttagtggctagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaa 1092  T

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Target: scaffold0129 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 7177 - 7082
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||| ||||||||  ||||||||||||| | | ||||||||||||||||||| ||||  | ||||||||  || |||||||||||| | |||||||    
T  7177 ttgtaaagtagtcaagtggctagaattcacctttttcaagatgaataagtggagtgtatgaggttcgaaacctgacccctgcatataacaatgcat 7082  T

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Target: scaffold0054 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 67267 - 67214
Alignment:
Q  16 gtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||| ||| ||||||| ||| |||||||||||||| |||||||||    
T  67267 gtggctagaattcacttttttcaaggtgattaagtggggtgtccagggttcgaa 67214  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 25107 - 25038
Alignment:
Q  41 atgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgca-tgtcactgccaact 109  Q
    |||||||||||||||||||||||||||||  | | ||||||||||| | |||||| |||| |||||||||    
T  25107 atgaataagtggggtgtccggggttcgaaccccagcccctgcatataataatgcattgtccctgccaact 25038  T

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Target: scaffold0334 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Complemental strand, 5387 - 5356
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  5387 aagatgaataagtggggtgtccggggttcgaa 5356  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 69
Target Start/End: Complemental strand, 419796 - 419765
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  419796 aagatgaataagtggggtgtccggggttcgaa 419765  T

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Target: scaffold0712 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 4598 - 4533
Alignment:
Q  44 aataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    |||||||||||| ||||  |||| || ||| |||||||||||| | |||||||||| |||||||||    
T  4598 aataagtggggtatccgaagttcaaattctgacccctgcatataacaatgcatgtccctgccaact 4533  T

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Target: scaffold0709 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 4618 - 4553
Alignment:
Q  44 aataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcatgtcactgccaact 109  Q
    |||||||||||| ||||  |||| || ||| |||||||||||| | |||||||||| |||||||||    
T  4618 aataagtggggtatccgaagttcaaattctgacccctgcatataacaatgcatgtccctgccaact 4553  T

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Target: scaffold1112 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1112
Description:

Target: scaffold1112; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 2448 - 2496
Alignment:
Q  38 aagatgaataagtggggtgtccggggttcgaagtctaacccctgcatat 86  Q
    ||||||||||||||||||||||||| ||||||  |  ||||||||||||    
T  2448 aagatgaataagtggggtgtccgggattcgaatcccgacccctgcatat 2496  T

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Target: scaffold1086 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 2607 - 2514
Alignment:
Q  1 ttgtcaagtagtctggtggctagaattctcttctttcaagatgaataagtggggtgtccggggttcgaagtctaacccctgcatatcagaatgcat 96  Q
    |||||| ||||||| |||||| |||||| |  |||  ||| ||||||||||||||||||||||||| || |  |||| |||||||| | |||||||    
T  2607 ttgtcaggtagtctagtggctggaattcac--cttataaggtgaataagtggggtgtccggggttcaaacttcaacctctgcatataataatgcat 2514  T

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