View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6178_low_5 (Length: 615)

Name: NF6178_low_5
Description: NF6178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6178_low_5
NF6178_low_5
[»] chr2 (66 HSPs)
chr2 (20-409)||(42361942-42362331)
chr2 (20-338)||(11151780-11152099)
chr2 (20-359)||(723933-724272)
chr2 (20-338)||(34139960-34140278)
chr2 (20-368)||(14634015-14634362)
chr2 (20-239)||(14202596-14202815)
chr2 (20-376)||(11690123-11690480)
chr2 (20-126)||(39284758-39284864)
chr2 (20-135)||(36988265-36988379)
chr2 (20-126)||(2334607-2334712)
chr2 (20-134)||(33162639-33162753)
chr2 (20-135)||(38312104-38312219)
chr2 (20-126)||(36318198-36318304)
chr2 (20-136)||(29867732-29867848)
chr2 (20-126)||(5723444-5723549)
chr2 (20-110)||(17057558-17057648)
chr2 (20-110)||(17085541-17085631)
chr2 (20-126)||(45099628-45099733)
chr2 (20-126)||(4503322-4503427)
chr2 (20-126)||(36205853-36205958)
chr2 (30-135)||(6595205-6595310)
chr2 (30-126)||(4484529-4484626)
chr2 (20-130)||(36773418-36773541)
chr2 (20-126)||(32289445-32289551)
chr2 (20-117)||(12123773-12123871)
chr2 (20-77)||(24885583-24885640)
chr2 (30-117)||(30833227-30833315)
chr2 (28-104)||(17865434-17865511)
chr2 (20-130)||(11067161-11067284)
chr2 (61-139)||(11049397-11049474)
chr2 (26-130)||(12632908-12633016)
chr2 (28-104)||(36757553-36757630)
chr2 (28-129)||(41586318-41586419)
chr2 (67-130)||(7815523-7815584)
chr2 (28-104)||(23078262-23078339)
chr2 (30-104)||(40015156-40015230)
chr2 (30-109)||(3278231-3278312)
chr2 (28-117)||(8040293-8040385)
chr2 (28-104)||(10445258-10445335)
chr2 (28-104)||(14698800-14698877)
chr2 (28-104)||(20522451-20522528)
chr2 (28-104)||(21630174-21630251)
chr2 (28-117)||(31056272-31056364)
chr2 (28-104)||(33118364-33118441)
chr2 (28-104)||(33528415-33528492)
chr2 (28-104)||(34389080-34389157)
chr2 (30-104)||(8389940-8390015)
chr2 (28-102)||(39483162-39483237)
chr2 (30-104)||(2837818-2837895)
chr2 (20-111)||(5700311-5700404)
chr2 (285-338)||(14202830-14202882)
chr2 (28-104)||(28258968-28259045)
chr2 (28-117)||(34682109-34682201)
chr2 (28-104)||(40739063-40739140)
chr2 (233-337)||(42288719-42288822)
chr2 (72-132)||(4560961-4561021)
chr2 (35-117)||(42269605-42269690)
chr2 (73-126)||(2837086-2837139)
chr2 (20-64)||(13121703-13121748)
chr2 (292-368)||(14635189-14635264)
chr2 (28-63)||(10707085-10707120)
chr2 (31-115)||(6266582-6266667)
chr2 (57-131)||(13121623-13121697)
chr2 (20-64)||(11049484-11049529)
chr2 (30-63)||(13569560-13569593)
chr2 (232-315)||(10445056-10445140)
[»] chr8 (66 HSPs)
chr8 (20-412)||(6598558-6598951)
chr8 (20-412)||(6674011-6674404)
chr8 (20-270)||(41365036-41365288)
chr8 (20-323)||(1292652-1292946)
chr8 (20-126)||(43036296-43036402)
chr8 (20-135)||(15212650-15212765)
chr8 (20-135)||(30143206-30143321)
chr8 (20-129)||(3303859-3303968)
chr8 (20-126)||(4731531-4731637)
chr8 (20-126)||(33352023-33352129)
chr8 (20-135)||(12702828-12702942)
chr8 (23-117)||(4733691-4733785)
chr8 (20-130)||(10929670-10929778)
chr8 (20-135)||(42498058-42498172)
chr8 (20-130)||(5689140-5689250)
chr8 (28-126)||(10015021-10015119)
chr8 (20-126)||(27811151-27811257)
chr8 (20-135)||(17982517-17982631)
chr8 (20-126)||(31218130-31218235)
chr8 (20-115)||(1345560-1345655)
chr8 (20-116)||(18106267-18106363)
chr8 (20-136)||(44303717-44303832)
chr8 (20-135)||(19945550-19945664)
chr8 (20-135)||(34254519-34254632)
chr8 (20-126)||(1746408-1746513)
chr8 (20-130)||(18141689-18141800)
chr8 (30-117)||(34256704-34256790)
chr8 (20-118)||(4162381-4162479)
chr8 (20-96)||(41366803-41366879)
chr8 (21-131)||(29796512-29796623)
chr8 (20-129)||(4743392-4743491)
chr8 (19-117)||(9765629-9765729)
chr8 (31-126)||(2627615-2627711)
chr8 (43-135)||(19948533-19948625)
chr8 (57-129)||(40320937-40321009)
chr8 (20-110)||(8153650-8153741)
chr8 (161-325)||(19751973-19752139)
chr8 (28-104)||(7412569-7412646)
chr8 (57-130)||(30291461-30291534)
chr8 (24-130)||(3318741-3318849)
chr8 (19-129)||(41266837-41266949)
chr8 (31-104)||(23799367-23799441)
chr8 (28-104)||(4456257-4456334)
chr8 (28-104)||(4696399-4696476)
chr8 (28-104)||(5702271-5702348)
chr8 (28-104)||(19175545-19175622)
chr8 (28-104)||(19752185-19752262)
chr8 (238-402)||(5990083-5990248)
chr8 (28-136)||(3051349-3051458)
chr8 (19-130)||(11712189-11712302)
chr8 (28-104)||(28307791-28307868)
chr8 (57-130)||(32902413-32902486)
chr8 (30-126)||(5990332-5990427)
chr8 (292-376)||(41365290-41365374)
chr8 (30-127)||(38863742-38863841)
chr8 (28-65)||(7493004-7493041)
chr8 (28-104)||(26403017-26403097)
chr8 (81-135)||(1872173-1872227)
chr8 (21-65)||(3231986-3232031)
chr8 (57-130)||(7597470-7597543)
chr8 (20-57)||(19491887-19491924)
chr8 (28-104)||(1261741-1261820)
chr8 (28-88)||(6311532-6311595)
chr8 (28-88)||(18870361-18870424)
chr8 (20-59)||(30291545-30291585)
chr8 (28-88)||(30655880-30655943)
[»] chr3 (84 HSPs)
chr3 (20-409)||(39153550-39153937)
chr3 (20-410)||(29681948-29682338)
chr3 (20-337)||(9580944-9581262)
chr3 (20-338)||(19684078-19684397)
chr3 (20-376)||(22835191-22835547)
chr3 (20-338)||(760507-760826)
chr3 (20-376)||(32744616-32744979)
chr3 (20-126)||(5236645-5236751)
chr3 (20-140)||(26386670-26386790)
chr3 (20-118)||(29810749-29810847)
chr3 (20-117)||(40734380-40734477)
chr3 (20-126)||(29812936-29813042)
chr3 (24-130)||(32890972-32891078)
chr3 (20-126)||(5260513-5260618)
chr3 (20-117)||(7762148-7762244)
chr3 (20-117)||(51398696-51398793)
chr3 (20-136)||(16498893-16499009)
chr3 (30-126)||(40735256-40735352)
chr3 (20-135)||(53921692-53921807)
chr3 (20-126)||(7764341-7764446)
chr3 (20-126)||(45095038-45095143)
chr3 (32-126)||(37408332-37408426)
chr3 (20-130)||(9666656-9666767)
chr3 (20-126)||(5258334-5258439)
chr3 (20-126)||(9636316-9636422)
chr3 (20-126)||(23200326-23200432)
chr3 (20-137)||(29196576-29196707)
chr3 (20-117)||(44331437-44331524)
chr3 (20-126)||(23198127-23198233)
chr3 (28-325)||(3323259-3323548)
chr3 (20-130)||(44700667-44700791)
chr3 (31-117)||(800980-801067)
chr3 (32-129)||(5373093-5373191)
chr3 (161-338)||(37466648-37466826)
chr3 (28-104)||(39032335-39032411)
chr3 (28-104)||(16264578-16264655)
chr3 (20-126)||(23392098-23392205)
chr3 (27-104)||(24694946-24695024)
chr3 (61-130)||(2075300-2075368)
chr3 (28-104)||(40592562-40592639)
chr3 (20-126)||(23410518-23410625)
chr3 (31-104)||(4386757-4386831)
chr3 (31-104)||(21711454-21711528)
chr3 (233-338)||(46859924-46860028)
chr3 (28-104)||(1736084-1736161)
chr3 (28-104)||(6794495-6794572)
chr3 (28-104)||(8370269-8370346)
chr3 (28-104)||(27974732-27974809)
chr3 (28-104)||(27986236-27986313)
chr3 (20-65)||(31314379-31314424)
chr3 (28-104)||(36029322-36029399)
chr3 (28-117)||(47649799-47649891)
chr3 (28-104)||(47923684-47923761)
chr3 (28-104)||(48438445-48438521)
chr3 (28-103)||(26299217-26299293)
chr3 (35-104)||(1417271-1417341)
chr3 (28-117)||(3715767-3715859)
chr3 (28-104)||(27026935-27027012)
chr3 (28-103)||(3328138-3328214)
chr3 (28-104)||(27453189-27453264)
chr3 (28-63)||(26928421-26928456)
chr3 (161-278)||(3327973-3328089)
chr3 (31-115)||(6716391-6716476)
chr3 (31-115)||(6718575-6718660)
chr3 (35-104)||(25929176-25929246)
chr3 (27-104)||(27038279-27038357)
chr3 (31-104)||(40844887-40844961)
chr3 (233-338)||(41820134-41820238)
chr3 (28-61)||(8126859-8126892)
chr3 (28-117)||(25796009-25796101)
chr3 (28-104)||(32143552-32143629)
chr3 (28-104)||(33386455-33386532)
chr3 (28-104)||(37466524-37466601)
chr3 (19-62)||(1313993-1314037)
chr3 (77-129)||(8166705-8166757)
chr3 (81-129)||(51352378-51352426)
chr3 (43-117)||(29100408-29100485)
chr3 (28-59)||(35925707-35925738)
chr3 (28-112)||(5366092-5366180)
chr3 (31-115)||(25637320-25637404)
chr3 (29-59)||(30709615-30709645)
chr3 (31-115)||(54635016-54635101)
chr3 (65-126)||(7782375-7782436)
chr3 (72-117)||(28253896-28253941)
[»] chr7 (79 HSPs)
chr7 (20-338)||(38671411-38671729)
chr7 (20-335)||(41649199-41649514)
chr7 (20-368)||(25615487-25615842)
chr7 (410-607)||(26632490-26632687)
chr7 (20-338)||(31518465-31518774)
chr7 (410-561)||(26640359-26640515)
chr7 (410-605)||(26616965-26617164)
chr7 (20-126)||(43864117-43864223)
chr7 (20-126)||(47676325-47676431)
chr7 (20-117)||(48489313-48489410)
chr7 (23-126)||(4586034-4586137)
chr7 (20-126)||(1113530-1113636)
chr7 (20-126)||(14070022-14070128)
chr7 (20-126)||(14380050-14380156)
chr7 (20-130)||(31105582-31105692)
chr7 (20-176)||(496172-496329)
chr7 (20-117)||(18126526-18126623)
chr7 (415-605)||(26652275-26652469)
chr7 (20-135)||(24526086-24526201)
chr7 (20-126)||(31733158-31733264)
chr7 (20-126)||(48491452-48491558)
chr7 (20-135)||(2761491-2761606)
chr7 (20-135)||(30024921-30025036)
chr7 (20-126)||(47674132-47674238)
chr7 (30-135)||(19502042-19502147)
chr7 (20-135)||(23554904-23555018)
chr7 (20-126)||(24514950-24515055)
chr7 (31-117)||(26417198-26417284)
chr7 (20-126)||(29990928-29991033)
chr7 (20-117)||(4538729-4538826)
chr7 (453-605)||(26609816-26609968)
chr7 (20-126)||(4178648-4178753)
chr7 (20-126)||(4253718-4253825)
chr7 (32-135)||(6570458-6570561)
chr7 (20-130)||(12098048-12098171)
chr7 (463-605)||(26622426-26622567)
chr7 (20-126)||(39731249-39731355)
chr7 (20-126)||(35853788-35853893)
chr7 (20-129)||(36574704-36574814)
chr7 (20-126)||(48408675-48408781)
chr7 (28-315)||(9189593-9189875)
chr7 (20-130)||(36146597-36146721)
chr7 (20-130)||(41317623-41317746)
chr7 (190-338)||(3258448-3258596)
chr7 (28-310)||(23402605-23402881)
chr7 (21-130)||(23565251-23565359)
chr7 (20-114)||(23343859-23343954)
chr7 (211-329)||(9184746-9184866)
chr7 (28-104)||(9184965-9185042)
chr7 (28-104)||(2580619-2580695)
chr7 (28-103)||(20284318-20284394)
chr7 (20-130)||(8153198-8153321)
chr7 (31-126)||(43504347-43504443)
chr7 (20-71)||(27347745-27347796)
chr7 (20-126)||(25767147-25767249)
chr7 (30-103)||(44847917-44847991)
chr7 (28-104)||(21989137-21989214)
chr7 (28-104)||(33332241-33332318)
chr7 (28-104)||(46516096-46516173)
chr7 (161-271)||(2580742-2580854)
chr7 (410-452)||(26609755-26609797)
chr7 (28-104)||(2479565-2479642)
chr7 (29-117)||(5817048-5817137)
chr7 (28-117)||(29160034-29160126)
chr7 (28-126)||(3047483-3047582)
chr7 (30-64)||(9235414-9235448)
chr7 (80-130)||(26639150-26639200)
chr7 (28-104)||(4796460-4796536)
chr7 (161-325)||(20284442-20284605)
chr7 (19-107)||(40808482-40808570)
chr7 (28-104)||(49091918-49091995)
chr7 (28-104)||(21640039-21640118)
chr7 (28-104)||(21646237-21646316)
chr7 (57-109)||(30843472-30843524)
chr7 (31-115)||(24789732-24789817)
chr7 (20-64)||(5514198-5514243)
chr7 (28-88)||(20357347-20357410)
chr7 (32-60)||(35961050-35961078)
chr7 (28-60)||(49091892-49091924)
[»] chr5 (56 HSPs)
chr5 (20-323)||(31182648-31182952)
chr5 (20-376)||(5887605-5887961)
chr5 (20-300)||(8566135-8566407)
chr5 (20-265)||(33831413-33831659)
chr5 (30-358)||(16451730-16452050)
chr5 (20-136)||(28750844-28750960)
chr5 (20-126)||(13488076-13488182)
chr5 (20-135)||(39468738-39468853)
chr5 (20-135)||(42926757-42926872)
chr5 (20-126)||(533642-533748)
chr5 (20-129)||(3075847-3075956)
chr5 (20-117)||(42426424-42426521)
chr5 (20-135)||(42428619-42428734)
chr5 (20-117)||(537907-538004)
chr5 (20-117)||(32636706-32636803)
chr5 (20-135)||(25412626-25412740)
chr5 (20-135)||(30683110-30683224)
chr5 (20-135)||(36074234-36074348)
chr5 (20-126)||(13239625-13239730)
chr5 (20-135)||(13342925-13343039)
chr5 (19-94)||(19806289-19806364)
chr5 (20-135)||(30182453-30182567)
chr5 (20-117)||(42310124-42310221)
chr5 (20-126)||(16409355-16409461)
chr5 (66-129)||(16649857-16649920)
chr5 (28-325)||(24553106-24553395)
chr5 (20-126)||(26177763-26177869)
chr5 (20-126)||(9789406-9789512)
chr5 (20-126)||(18441830-18441936)
chr5 (20-126)||(26170654-26170760)
chr5 (161-329)||(28832596-28832764)
chr5 (19-104)||(11181623-11181708)
chr5 (161-325)||(17003538-17003703)
chr5 (28-104)||(28832486-28832563)
chr5 (30-104)||(14520461-14520536)
chr5 (28-104)||(9353123-9353200)
chr5 (28-104)||(11916763-11916840)
chr5 (161-325)||(31300175-31300339)
chr5 (28-104)||(31300386-31300463)
chr5 (20-126)||(5007424-5007530)
chr5 (20-126)||(3325786-3325893)
chr5 (67-130)||(9049591-9049654)
chr5 (28-117)||(10281981-10282073)
chr5 (28-104)||(17003750-17003827)
chr5 (28-104)||(36932139-36932216)
chr5 (29-104)||(19588975-19589051)
chr5 (75-135)||(37439012-37439072)
chr5 (233-358)||(27638225-27638349)
chr5 (28-104)||(15464763-15464840)
chr5 (31-126)||(29720244-29720340)
chr5 (28-104)||(42127161-42127238)
chr5 (31-117)||(29722413-29722500)
chr5 (20-63)||(37439070-37439112)
chr5 (31-115)||(29751352-29751437)
chr5 (161-265)||(42127008-42127113)
chr5 (28-88)||(31180447-31180510)
[»] chr1 (75 HSPs)
chr1 (20-338)||(8550976-8551295)
chr1 (24-338)||(40122391-40122704)
chr1 (20-338)||(834356-834659)
chr1 (20-157)||(3847310-3847447)
chr1 (20-315)||(197097-197384)
chr1 (20-139)||(15820167-15820286)
chr1 (20-139)||(31659098-31659217)
chr1 (20-130)||(13138163-13138273)
chr1 (20-139)||(23555454-23555573)
chr1 (20-135)||(10925087-10925202)
chr1 (20-126)||(28220415-28220521)
chr1 (20-126)||(28223610-28223716)
chr1 (211-368)||(37167723-37167875)
chr1 (20-117)||(44455042-44455139)
chr1 (20-126)||(1833395-1833501)
chr1 (20-126)||(3189204-3189309)
chr1 (20-126)||(3198021-3198126)
chr1 (20-126)||(3206860-3206965)
chr1 (20-126)||(3156739-3156844)
chr1 (20-126)||(37503743-37503849)
chr1 (20-130)||(45644544-45644654)
chr1 (20-136)||(4552826-4552942)
chr1 (20-136)||(13659525-13659641)
chr1 (20-136)||(20762535-20762650)
chr1 (20-135)||(46064782-46064897)
chr1 (20-126)||(49918222-49918329)
chr1 (20-130)||(50169399-50169509)
chr1 (20-118)||(928166-928265)
chr1 (30-126)||(13316517-13316613)
chr1 (20-135)||(30476637-30476752)
chr1 (20-126)||(37560058-37560164)
chr1 (28-329)||(47098400-47098693)
chr1 (20-130)||(50167364-50167487)
chr1 (20-130)||(28265743-28265865)
chr1 (161-315)||(32889791-32889947)
chr1 (30-117)||(51765277-51765364)
chr1 (20-130)||(777099-777222)
chr1 (28-329)||(27103977-27104269)
chr1 (233-338)||(47114626-47114730)
chr1 (28-315)||(47102427-47102707)
chr1 (233-336)||(34602930-34603032)
chr1 (249-338)||(3847446-3847535)
chr1 (233-338)||(7482842-7482946)
chr1 (161-329)||(9476615-9476784)
chr1 (28-104)||(22819660-22819737)
chr1 (28-104)||(29652042-29652119)
chr1 (28-104)||(32889667-32889744)
chr1 (233-329)||(34603058-34603153)
chr1 (28-117)||(40816592-40816684)
chr1 (28-117)||(47703711-47703803)
chr1 (19-130)||(43342443-43342555)
chr1 (20-115)||(44650352-44650448)
chr1 (30-117)||(19073159-19073249)
chr1 (30-117)||(19121049-19121139)
chr1 (30-104)||(37069998-37070073)
chr1 (28-104)||(3281936-3282013)
chr1 (28-104)||(13598629-13598706)
chr1 (28-104)||(13604413-13604490)
chr1 (28-104)||(21536361-21536438)
chr1 (28-104)||(24202556-24202635)
chr1 (28-63)||(16124347-16124382)
chr1 (31-104)||(26644689-26644763)
chr1 (233-338)||(28241843-28241947)
chr1 (28-117)||(8281547-8281639)
chr1 (28-104)||(9476491-9476568)
chr1 (65-118)||(16455527-16455580)
chr1 (31-126)||(40282257-40282353)
chr1 (19-105)||(2263166-2263253)
chr1 (31-115)||(9036309-9036393)
chr1 (31-115)||(9987093-9987178)
chr1 (28-104)||(19361220-19361298)
chr1 (31-115)||(21053849-21053934)
chr1 (81-130)||(8871310-8871359)
chr1 (32-65)||(9022737-9022770)
chr1 (20-57)||(41360857-41360894)
[»] chr6 (39 HSPs)
chr6 (20-376)||(28137597-28137955)
chr6 (20-325)||(16566879-16567185)
chr6 (20-338)||(16568703-16569022)
chr6 (202-376)||(5043043-5043217)
chr6 (20-135)||(9183220-9183335)
chr6 (20-139)||(26954474-26954593)
chr6 (20-119)||(33160543-33160641)
chr6 (28-135)||(33211382-33211489)
chr6 (20-126)||(5406388-5406493)
chr6 (20-126)||(5410713-5410818)
chr6 (20-117)||(5413582-5413678)
chr6 (20-135)||(31404863-31404978)
chr6 (20-126)||(16452519-16452624)
chr6 (20-126)||(2171720-2171826)
chr6 (20-135)||(30834726-30834840)
chr6 (20-137)||(3039092-3039221)
chr6 (28-104)||(5757269-5757346)
chr6 (31-117)||(3072952-3073039)
chr6 (20-117)||(6097622-6097720)
chr6 (161-315)||(31936928-31937085)
chr6 (28-104)||(24435763-24435839)
chr6 (28-100)||(5572038-5572111)
chr6 (28-104)||(31936804-31936881)
chr6 (28-104)||(31979741-31979818)
chr6 (28-104)||(5017287-5017364)
chr6 (28-104)||(22963928-22964005)
chr6 (28-104)||(23824388-23824465)
chr6 (31-126)||(411982-412077)
chr6 (63-138)||(30517881-30517954)
chr6 (30-104)||(22709241-22709316)
chr6 (233-321)||(2973551-2973638)
chr6 (28-117)||(21801120-21801212)
chr6 (28-63)||(21356266-21356301)
chr6 (47-137)||(30684121-30684212)
chr6 (20-65)||(4045356-4045402)
chr6 (28-104)||(14521903-14521982)
chr6 (52-115)||(27647754-27647819)
chr6 (72-104)||(10076982-10077014)
chr6 (45-137)||(20505073-20505164)
[»] chr4 (72 HSPs)
chr4 (20-223)||(5871595-5871799)
chr4 (20-184)||(13009620-13009784)
chr4 (20-376)||(47038598-47038949)
chr4 (20-126)||(48142915-48143021)
chr4 (20-126)||(52082846-52082952)
chr4 (20-135)||(24968975-24969091)
chr4 (20-135)||(5429543-5429658)
chr4 (20-126)||(52095551-52095657)
chr4 (20-126)||(54200095-54200201)
chr4 (20-136)||(56178826-56178941)
chr4 (23-126)||(12739742-12739845)
chr4 (23-126)||(12747948-12748051)
chr4 (20-135)||(26175825-26175940)
chr4 (20-126)||(9927647-9927752)
chr4 (20-126)||(37740499-37740604)
chr4 (20-117)||(34570603-34570700)
chr4 (233-376)||(46702915-46703058)
chr4 (20-130)||(52467543-52467654)
chr4 (20-126)||(12745625-12745731)
chr4 (20-117)||(29254376-29254473)
chr4 (20-135)||(29999995-30000109)
chr4 (20-141)||(13992475-13992596)
chr4 (20-126)||(36994398-36994503)
chr4 (49-126)||(52093882-52093959)
chr4 (20-135)||(5370276-5370390)
chr4 (31-129)||(3909977-3910075)
chr4 (19-130)||(45687371-45687495)
chr4 (229-358)||(5870027-5870156)
chr4 (57-130)||(46147581-46147654)
chr4 (20-126)||(5208031-5208138)
chr4 (20-104)||(6542370-6542455)
chr4 (19-130)||(36463577-36463701)
chr4 (20-103)||(48142567-48142651)
chr4 (20-90)||(31474059-31474129)
chr4 (190-338)||(41963869-41964017)
chr4 (19-106)||(6677360-6677449)
chr4 (57-130)||(37229962-37230035)
chr4 (31-126)||(31495509-31495605)
chr4 (19-129)||(37755111-37755223)
chr4 (28-104)||(10047610-10047687)
chr4 (20-117)||(51336945-51337043)
chr4 (28-104)||(3777778-3777855)
chr4 (28-104)||(5112466-5112543)
chr4 (28-104)||(16623084-16623161)
chr4 (28-104)||(16628663-16628740)
chr4 (30-104)||(5268991-5269066)
chr4 (43-130)||(21704040-21704127)
chr4 (19-104)||(31985424-31985509)
chr4 (20-65)||(4587892-4587937)
chr4 (28-104)||(5396462-5396539)
chr4 (19-130)||(23042977-23043090)
chr4 (28-117)||(24334040-24334132)
chr4 (28-104)||(36315021-36315098)
chr4 (28-104)||(36329230-36329307)
chr4 (43-114)||(6375960-6376030)
chr4 (31-130)||(39593958-39594058)
chr4 (31-104)||(25861824-25861898)
chr4 (28-104)||(6743206-6743283)
chr4 (28-131)||(37782092-37782197)
chr4 (28-104)||(39774096-39774173)
chr4 (20-104)||(48893831-48893918)
chr4 (30-104)||(8689287-8689362)
chr4 (233-338)||(378832-378936)
chr4 (20-65)||(37229911-37229957)
chr4 (28-117)||(3793856-3793948)
chr4 (28-104)||(42599366-42599442)
chr4 (30-101)||(5147909-5147981)
chr4 (73-115)||(29056229-29056270)
chr4 (31-117)||(5135954-5136041)
chr4 (232-268)||(26700055-26700091)
chr4 (19-130)||(44968017-44968129)
chr4 (72-104)||(54867453-54867485)
[»] scaffold0066 (1 HSPs)
scaffold0066 (20-126)||(20604-20710)
[»] scaffold0006 (4 HSPs)
scaffold0006 (20-136)||(149286-149402)
scaffold0006 (28-104)||(5914-5991)
scaffold0006 (28-104)||(133070-133147)
scaffold0006 (31-63)||(2726-2758)
[»] scaffold1519 (1 HSPs)
scaffold1519 (20-126)||(790-895)
[»] scaffold0002 (1 HSPs)
scaffold0002 (20-126)||(434406-434511)
[»] scaffold0491 (2 HSPs)
scaffold0491 (30-126)||(11360-11457)
scaffold0491 (30-126)||(8934-9031)
[»] scaffold0016 (2 HSPs)
scaffold0016 (57-126)||(114463-114532)
scaffold0016 (20-65)||(114537-114581)
[»] scaffold0176 (1 HSPs)
scaffold0176 (28-101)||(17480-17554)
[»] scaffold0140 (1 HSPs)
scaffold0140 (28-104)||(8208-8285)
[»] scaffold0087 (2 HSPs)
scaffold0087 (28-104)||(36623-36700)
scaffold0087 (28-104)||(43752-43829)
[»] scaffold0036 (1 HSPs)
scaffold0036 (28-104)||(85912-85989)
[»] scaffold0148 (1 HSPs)
scaffold0148 (28-117)||(10960-11052)
[»] scaffold0129 (1 HSPs)
scaffold0129 (20-91)||(19128-19199)
[»] scaffold0286 (1 HSPs)
scaffold0286 (63-126)||(22217-22280)
[»] scaffold0219 (2 HSPs)
scaffold0219 (90-130)||(27716-27756)
scaffold0219 (19-65)||(27631-27678)
[»] scaffold0098 (1 HSPs)
scaffold0098 (28-63)||(45427-45462)
[»] scaffold0078 (1 HSPs)
scaffold0078 (232-275)||(23959-24002)
[»] scaffold0137 (1 HSPs)
scaffold0137 (31-115)||(6166-6250)
[»] scaffold0188 (2 HSPs)
scaffold0188 (28-104)||(17739-17818)
scaffold0188 (28-104)||(23832-23911)


Alignment Details
Target: chr2 (Bit Score: 294; Significance: 1e-165; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 20 - 409
Target Start/End: Complemental strand, 42362331 - 42361942
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42362331 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 42362232  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcg 219  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||| |   ||||||| |    
T  42362231 ctctcttgaagttctctctcatcttccttcaaaaatgagctgaaacacttaaatagtacacagtgacagacaaaatcgcgccgcgctacccaaaatcgtg 42362132  T
Q  220 ccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaatcgcgccacgatttgccttcagcagaaaccatc 319  Q
     |||  |||| | |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| || || | ||||||||||||||||||||||    
T  42362131 tcacgattgatgagtacgacccaaggtacgacaacgttatccacaaatcgcgtcacgcctgcaccaatctcgtcatgttttgccttcagcagaaaccatc 42362032  T
Q  320 cattctaccaccaaaatcgtgacgcgccactcaaaatcgtgtcacaattatgagtttccagcaacactaatttgaaggcaaattacaaca 409  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  42362031 cattctgccaccaaaatcgtgacgcgccactcaaaatcgtgtcacgattatgagttttcagcaacactaatttgaaggcaaattacaaca 42361942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 20 - 338
Target Start/End: Original strand, 11151780 - 11152099
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11151780 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 11151879  T
Q  120 ctctcttgaagttctctctcca-cttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgc 218  Q
    ||||||||||||||||||||   | ||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||  ||||||| |||||||||    
T  11151880 ctctcttgaagttctctctctttcctccttcaaaaatgagctgaaacacttaaagagtacacagtgatagacaaaatcgcgatgcgccagtgaaaatcgc 11151979  T
Q  219 gccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaatcgcgccacgatttgccttcagcagaaaccat 318  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  11151980 gccacagttgaagcgtgcgacccaaggtacgacaaccttatccacaaaccgcgtcacgcctgcaccaatcgcaccatgatttgccttcagcagaaaccat 11152079  T
Q  319 ccattctaccaccaaaatcg 338  Q
    ||||||| ||||||||||||    
T  11152080 ccattctgccaccaaaatcg 11152099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 20 - 359
Target Start/End: Original strand, 723933 - 724272
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  723933 tttcactcacccaaggtgtttacaatgtttcccaacccaaaagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 724032  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcg 219  Q
    |||  |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||| |||||||||| || |||||||| ||||||||||    
T  724033 ctcggttgaagttctctctcctcttctttcaaaaatgagctgaaacacttaaatagtacacagtgacagacaaaatcgcgtcgcgccagtgaaaatcgcg 724132  T
Q  220 ccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaaccat 318  Q
    ||||  |||||||||||||||||||||||||||| ||||||||||||||| ||||| |||  ||  ||||||||||||||||| ||||| ||||||||||    
T  724133 ccacggttgaagcgtacgacccaaggtacgacaatcttatccacaaatcgtgtcacacctacacaaaatcgcgccacgatttg-cttcaacagaaaccat 724231  T
Q  319 ccattctaccaccaaaatcgtgacgcgccactcaaaatcgt 359  Q
    ||||||||||| |||||||| | | ||||||| ||||||||    
T  724232 ccattctaccagcaaaatcgcgccacgccactgaaaatcgt 724272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 20 - 338
Target Start/End: Original strand, 34139960 - 34140278
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||    
T  34139960 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagactttcaaccctaaagttacctcctttgattttccaagttttc 34140059  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcg 219  Q
    ||||||||||||||| ||||    |||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||  |||||||||    
T  34140060 ctctcttgaagttctatctcttactccttcaaaaatgagctgaaacacttaaatagtacacagtgacagacaaaatcgcgccgcgccagtaaaaatcgcg 34140159  T
Q  220 ccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaaccat 318  Q
    | ||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||| |||||| |||||| ||||||||||||||||    
T  34140160 ctacggttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcgcgcctgtacaaaattgcgccatgatttg-cttcagcagaaaccat 34140258  T
Q  319 ccattctaccaccaaaatcg 338  Q
    | ||||| | | ||||||||    
T  34140259 caattctgctagcaaaatcg 34140278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 20 - 368
Target Start/End: Original strand, 14634015 - 14634362
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  14634015 tttcactcacccaaggtgtttacaatgtttcccaacccaaaagaactctaatcaaaaaccctcaactctaaagttacctcctttgatttcccaagttttc 14634114  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcg 219  Q
     |||||||||||||||||||| ||| ||| |||||||||||||||||||||||||| ||| ||||| |||||||||| ||||||||||  |||||| |||    
T  14634115 ttctcttgaagttctctctcctctttcttaaaaaatgagctgaaacacttaaataggacacagtgacagacaaaatcgcgccgcgccaatgaaaat-gcg 14634213  T
Q  220 ccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaaccat 318  Q
    ||||  |||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||  ||||||||||||| ||| ||||||||||||||||    
T  14634214 ccacggttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgacacacctgcacaaaatcgcgccacgacttg-cttcagcagaaaccat 14634312  T
Q  319 ccattctaccaccaaaatcgtgacgcgccactcaaaatcgtgtcacaatt 368  Q
    ||||| | ||| ||| |||| | | |||| || ||||||| | |||||||    
T  14634313 ccattttgccagcaagatcgcgccacgcctctgaaaatcgcgccacaatt 14634362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 20 - 239
Target Start/End: Original strand, 14202596 - 14202815
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  14202596 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacctcatttgatttcccaagttttc 14202695  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcg 219  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||| |||||||||| | | ||||||| ||||||||||    
T  14202696 ctctcttgaagttctctctcctcttccttcaaaaatgagctgaaacacttaagtagtacacagtgacagacaaaatcgcactgcgccagtgaaaatcgcg 14202795  T
Q  220 ccacatttgaagcgtacgac 239  Q
    ||||  ||||||||||||||    
T  14202796 ccacggttgaagcgtacgac 14202815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 20 - 376
Target Start/End: Complemental strand, 11690480 - 11690123
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11690480 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactataatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 11690381  T
Q  120 ctctcttgaagttctctctc--cacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcg 217  Q
    ||||||||||||||||||||  | || | || ||||||||| |||||||||||||||||||| | ||| ||||||| || | || |||||   |||||||    
T  11690380 ctctcttgaagttctctctcttctctcctttaaaaaatgagttgaaacacttaaatagtacacaatgacagacaaa-tcgcaccacgccacccaaaatcg 11690282  T
Q  218 cgccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaatcgcgccacgatttgccttcagcagaaacca 317  Q
     | |||  |||| | |||||| ||||||||||||||||||||| | |||||| |||||||||| || |||| | ||||||||| |||||  |||||||||    
T  11690281 tgtcacgattgatgagtacgatccaaggtacgacaaccttatcaataaatcgtgtcacgcctgcacaaatcccaccacgattttccttcgacagaaacca 11690182  T
Q  318 tccattctaccaccaaaatcgtgacgcgccactcaaaatcgtgtcacaattatgagttt 376  Q
    | | || | ||  |||||||||| |  |||| ||| ||||||||||  |||||||||||    
T  11690181 tacgttatgccgacaaaatcgtgtcatgccattcataatcgtgtcatgattatgagttt 11690123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 39284864 - 39284758
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  39284864 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 39284765  T
Q  120 ctctctt 126  Q
    |||||||    
T  39284764 ctctctt 39284758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 36988265 - 36988379
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  36988265 tttcactcacc-aaggtgtttactatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 36988363  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  36988364 ctctcttcaagctctc 36988379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 2334607 - 2334712
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||      
T  2334607 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaataccctcaaccctaaagttacctcctttgatttcccaagtttct 2334705  T
Q  120 ctctctt 126  Q
    |||||||    
T  2334706 ctctctt 2334712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 33162639 - 33162753
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||      
T  33162639 tttcaatcacccaaggtgtttacaatgtttcccaactcaagagaaccctaatcaaagaccctcaaccctaaaattacctcctttgatttcccaagtttct 33162738  T
Q  120 ctctcttgaagttct 134  Q
    |||||||||| ||||    
T  33162739 ctctcttgaaattct 33162753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 38312219 - 38312104
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||      
T  38312219 tttcactcacacaaggtgtatacaatgtttcccaacccaagagaactctaatcaaagaacctcaaccctaaagttacctcctttgatttcccaaatttct 38312120  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  38312119 ctctcttcaagctctc 38312104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 36318198 - 36318304
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||      
T  36318198 tttcactcacccaaggtgtttacaatatttcccaacccaagataactctaatcaaagacattcaaccctaaagttacctcctttgatttcccaagtttct 36318297  T
Q  120 ctctctt 126  Q
    |||||||    
T  36318298 ctctctt 36318304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 29867848 - 29867732
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||| || ||||||      
T  29867848 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaacccaatagttaccttctttgattcccaaagtttct 29867749  T
Q  120 ctctcttgaagttctct 136  Q
    ||||||| ||| |||||    
T  29867748 ctctctttaagctctct 29867732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 5723444 - 5723549
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||      
T  5723444 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccccaaaccctaaagttgcctcctttgatttcccaagtttct 5723542  T
Q  120 ctctctt 126  Q
    |||||||    
T  5723543 ctctctt 5723549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 17057558 - 17057648
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcc 110  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  17057558 tttcactcacccaaggtgtttacaatatttcccaacccaagagaactctaatcaaagaccttcaaccctaaagttacctccgttgatttcc 17057648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 17085541 - 17085631
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcc 110  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  17085541 tttcactcacccaaggtgtttacaatatttcccaacccaagagaactctaatcaaagaccttcaaccctaaagttacctccgttgatttcc 17085631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 45099733 - 45099628
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||      
T  45099733 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttct 45099635  T
Q  120 ctctctt 126  Q
    |||||||    
T  45099634 ctctctt 45099628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 4503322 - 4503427
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||||||||||||||||||      
T  4503322 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaacctaaaccctaaagttgcttcctttgatttcccaagtttct 4503420  T
Q  120 ctctctt 126  Q
    |||||||    
T  4503421 ctctctt 4503427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 36205853 - 36205958
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||      
T  36205853 tttcactcacc-aaggtgtttaccatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttct 36205951  T
Q  120 ctctctt 126  Q
    |||||||    
T  36205952 ctctctt 36205958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 6595205 - 6595310
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaa 129  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||  ||||||| ||    
T  6595205 ccaaagtgtttacaatttttcccagcccaagagaactctaatcaaagaccctcaaccctaaagttacctcatttgatttcctaagtttctctctcttcaa 6595304  T
Q  130 gttctc 135  Q
    | ||||    
T  6595305 gctctc 6595310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 4484529 - 4484626
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||  |||||||||||||||||||  |||||||    
T  4484529 ccaaggtgtttacaatgtttcccaacccaagagaagctctaatcaaagaccctaaaccctagagttactccctttgatttcccaagtttctctctctt 4484626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 36773541 - 36773418
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactc-------------taatcaaagaccctcaaccctaaagttacctcctttgat 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |             |||||||||||||||||||||||||||||||||||||||    
T  36773541 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaacccctcaagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgat 36773442  T
Q  107 ttcccaagttttcctctcttgaag 130  Q
    ||||| |||||  |||||||||||    
T  36773441 ttccctagtttctctctcttgaag 36773418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 32289551 - 32289445
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||| |||||||||||||| || ||||||| ||||||  |||||||||||||||||||     
T  32289551 tttcactcacc-aaggtgtttaccatgtttccaaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttc 32289453  T
Q  119 cctctctt 126  Q
     |||||||    
T  32289452 tctctctt 32289445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 12123773 - 12123871
Alignment:
Q  20 tttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    ||||||||| |||||||||||| || |||||||||||| ||||||||||||| |||||||| |||||| ||||||||||| |||||||||  |||||||    
T  12123773 tttcactcatccaaggtgtttataaatgtttcccaacctaagagaactctaaccaaagaccatcaaccttaaagttacctactttgatttttcaagttt 12123871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 24885640 - 24885583
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaaga 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24885640 tttcactcacccaaggtgtttacaatgtttcccaacccatgagaactctaatcaaaga 24885583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 30833315 - 30833227
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||| ||||||||||||||||||||||||||| || ||||||||||| ||||| ||||||| ||||||  |||||||||||||||||||    
T  30833315 ccaaagtgtttacaatgtttcccaacccaagataagctctaatcaaaaaccctaaaccctagagttactccctttgatttcccaagttt 30833227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 17865434 - 17865511
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||||||||||| ||  | | ||||||| |||||||||||||||||||||||||    
T  17865434 acccaaggtgtttacaatgtttcccaacccaagagatcttcactacaaagacactcaaccctaaagttacctcctttg 17865511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 11067284 - 11067161
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacc-------------caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgat 106  Q
    |||||||||||||||||||||||||||||||||||||             |||||||||  |||||||||||  |||||| |||||||||||||||||||    
T  11067284 tttcactcacccaaggtgtttacaatgtttcccaaccgaagcgaagccctcaagagaaccttaatcaaagacaatcaaccataaagttacctcctttgat 11067185  T
Q  107 ttcccaagttttcctctcttgaag 130  Q
    ||||| |||||  |||||||||||    
T  11067184 ttccctagtttctctctcttgaag 11067161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 11049474 - 11049397
Alignment:
Q  61 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctctctc 139  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||  ||||||||||| ||| ||||    
T  11049474 agaaccctaatcaaagaccatcaaccctaaa-ttacctcctttgatttcccaagtttctctctcttgaagctctatctc 11049397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 12632908 - 12633016
Alignment:
Q  26 tcacccaaggtgtttac-aatgtttcccaacccaaga---gaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcct 121  Q
    ||||||||||||||||| |||||||| |||||||| |    |||||| || |||||| |||||||||||||||| |||||||| ||||||||||||  ||    
T  12632908 tcacccaaggtgtttacaaatgtttctcaacccaataaataaactctcattaaagacactcaaccctaaagttatctcctttggtttcccaagtttctct 12633007  T
Q  122 ctcttgaag 130  Q
    |||||||||    
T  12633008 ctcttgaag 12633016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 36757630 - 36757553
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||| |||||||||||||||||||||||||    
T  36757630 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttg 36757553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 41586419 - 41586318
Alignment:
Q  28 acccaaggtgtttacaa-tgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctct 125  Q
    ||||||||||||||||| ||||| |||||||||||||| |||| | ||||||| ||||||||||||||||| || | |||||| ||||||||  ||||||    
T  41586419 acccaaggtgtttacaactgttttccaacccaagagaagctctcaccaaagacactcaaccctaaagttacatcatctgatttaccaagttt--ctctct 41586322  T
Q  126 tgaa 129  Q
    ||||    
T  41586321 tgaa 41586318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 7815523 - 7815584
Alignment:
Q  67 ctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaag 130  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||    
T  7815523 ctaatcaaagaccctcaaccctaaagttacctcc-ttgatttctcaagtttt-ctctcttgaag 7815584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 23078339 - 23078262
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat--caaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||| | ||| ||  ||||||| |||||||| ||||||||||||||||    
T  23078339 acccaaggtgtttacaatgtttcccaacccaagag-attctcatcacaaagacactcaacccaaaagttacctcctttg 23078262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 40015156 - 40015230
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||| |||||||||||||||||||||||||||||||   |||  || || |||||||||||||||||||||||||    
T  40015156 ccaatgtgtttacaatgtttcccaacccaagagaacctcaatacaaaacactcaaccctaaagttacctcctttg 40015230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 3278231 - 3278312
Alignment:
Q  30 ccaaggtgtttacaa-tgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttc 109  Q
    ||||||||||||||| ||||| |||||||||||||| |||| ||||| ||  |||||||||||||||||||| |||||||||    
T  3278231 ccaaggtgtttacaaatgttttccaacccaagagaatctctcatcaacgatactcaaccctaaagttacctcatttgatttc 3278312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 8040293 - 8040385
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacc--caagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||||||||||||||||||  ||||||||||  | | ||||||| ||||||| |||||||||||||||||  || ||||||||    
T  8040293 acccaaggtgtttacaatgtttcccaaccctcaagagaacttcactacaaagacactcaaccataaagttacctcctttgtattaccaagttt 8040385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 10445335 - 10445258
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||||| |||||| |||    |||||||  ||||||||||||||||||||||||    
T  10445335 acccaaggtgtttacaatgtttcccaacccgagagaacctcactacaaagacattcaaccctaaagttacctcctttg 10445258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 14698877 - 14698800
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||||| |||||  |||    ||||||| |||||||||||||||||||||||||    
T  14698877 acccaaggtgtttacaatgtttcccaacccgagagatcctcactacaaagacactcaaccctaaagttacctcctttg 14698800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 20522451 - 20522528
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||| ||||||||||| |||||||||||||||| ||||    ||||||| |||||||||||||||||||||||||    
T  20522451 acccaagttgtttacaatgcttcccaacccaagagatactcactacaaagacactcaaccctaaagttacctcctttg 20522528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 21630174 - 21630251
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||| |||||| ||||||||||||||||||    
T  21630174 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaacactaaagttacctcctttg 21630251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 31056272 - 31056364
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacc--caagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||||||||||||||||||  |||||||| |||    ||||||| ||||||||| |||||||||||||||  |||||||||||    
T  31056272 acccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttacctcctttgtattcccaagttt 31056364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 33118364 - 33118441
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||| ||||||||||||||  |||    ||||||| |||||||||||||||||||||||||    
T  33118364 acccaaggtgtttacaatgttccccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttg 33118441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 33528492 - 33528415
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||| |||||||||||||||||||||||||||||  |||    ||||||| |||||||||||||||||||||||||    
T  33528492 acccaatgtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttg 33528415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 34389080 - 34389157
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||| | |||||||||||||||||||||||    
T  34389080 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacacacaaccctaaagttacctcctttg 34389157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 8390015 - 8389940
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||| ||||||||||| | ||    |||||||||||||||||||||||| ||||||||    
T  8390015 ccaaggtgtttacaatgtttcctaacccaagagatcatcactacaaagaccctcaaccctaaagttatctcctttg 8389940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 39483162 - 39483237
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctt 102  Q
    |||||||||||||||||| |||||||||||||||||  |||  | ||||||| |||||||||||||||| ||||||    
T  39483162 acccaaggtgtttacaatatttcccaacccaagagatcctcacaacaaagacactcaaccctaaagttatctcctt 39483237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 2837895 - 2837818
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||  ||||||||   | | ||||||| |||||||||||||||||||||||||    
T  2837895 ccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctaaagttacctcctttg 2837818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 5700311 - 5700404
Alignment:
Q  20 tttcactcacccaaggtgtttacaa-tgtttcccaacccaa-gagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttccc 111  Q
    ||||| |||||||| |||||||||| |||||| |||||||| ||||||  | || || || ||||||||||||||||||||||||| |||||||    
T  5700311 tttcattcacccaaagtgtttacaaatgtttctcaacccaacgagaaccatcattaatgatcctcaaccctaaagttacctcctttaatttccc 5700404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 285 - 338
Target Start/End: Original strand, 14202830 - 14202882
Alignment:
Q  285 aatcgcgccacgatttgccttcagcagaaaccatccattctaccaccaaaatcg 338  Q
    |||||||||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  14202830 aatcgcgccacgatttgc-ttcagcagaaaccatccattctgccagcaaaatcg 14202882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 28259045 - 28258968
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||| ||||||||||||||||||||||||||||  |||     |||||| |||||||||||||||||||||||||    
T  28259045 acccaagatgtttacaatgtttcccaacccaagagatcctcactataaagacactcaaccctaaagttacctcctttg 28258968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 34682201 - 34682109
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||||||||||| ||||| |  ||||||||   | | ||||||| |||||||||||||||||||||||||  |||||||||||    
T  34682201 acccaaggtgtttacaatgttttccaactctcaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtattcccaagttt 34682109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 40739063 - 40739140
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||| |||||||||| |||| |||||||||    
T  40739063 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttg 40739140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 233 - 337
Target Start/End: Original strand, 42288719 - 42288822
Alignment:
Q  233 gtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaa-tcgcgccacgatttgccttcagcagaaaccatccattctaccacc 331  Q
    |||||||||||||||| ||||||||||| | |||||| |||| |  || || || || ||||||||||||| |||| ||||||||||||||||||||| |    
T  42288719 gtacgacccaaggtacaacaaccttatcaagaaatcgtgtcatga-tgcacaaaatcacgccacgatttgc-ttcaacagaaaccatccattctaccagc 42288816  T
Q  332 aaaatc 337  Q
    ||||||    
T  42288817 aaaatc 42288822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 4561021 - 4560961
Alignment:
Q  72 caaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagtt 132  Q
    ||||||| |||||| ||||||||| ||||| |||||||| ||||||| |||||||||||||    
T  4561021 caaagacactcaactctaaagttatctcctctgatttcctaagtttttctctcttgaagtt 4560961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 42269605 - 42269690
Alignment:
Q  35 gtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||||||||||||  ||||||||   | | ||||||| ||||||| |||||||||||||||||  |||||||||||    
T  42269605 gtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccttaaagttacctcctttgtattcccaagttt 42269690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 2837086 - 2837139
Alignment:
Q  73 aaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    ||||| |||||||| |||| |||||||||||||||||||||||||  |||||||    
T  2837086 aaagatcctcaaccttaaaattacctcctttgatttcccaagtttctctctctt 2837139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 13121748 - 13121703
Alignment:
Q  20 tttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaa 64  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||    
T  13121748 tttcactcacccaatgtgtttacaaatgtttcccaacccaagagaa 13121703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 292 - 368
Target Start/End: Original strand, 14635189 - 14635264
Alignment:
Q  292 ccacgatttgccttcagcagaaaccatccattctaccaccaaaatcgtgacgcgccactcaaaatcgtgtcacaatt 368  Q
    ||||||||||| ||||||| |||||||||||||| ||| |||||||||| | |||| || ||||||| | |||||||    
T  14635189 ccacgatttgc-ttcagcataaaccatccattctgccagcaaaatcgtgccacgcctctgaaaatcgcgccacaatt 14635264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 10707120 - 10707085
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga 63  Q
    ||||||||||||||||||||||| ||||||||||||    
T  10707120 acccaaggtgtttacaatgtttctcaacccaagaga 10707085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 6266667 - 6266582
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagt 115  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  |||||||||||||||||    
T  6266667 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagt 6266582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 57 - 131
Target Start/End: Complemental strand, 13121697 - 13121623
Alignment:
Q  57 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagt 131  Q
    ||||||||| ||| ||||||| | ||| ||||||| |||||||||||||||| | ||||||   |||||||||||    
T  13121697 caagagaaccctattcaaagatcatcagccctaaaattacctcctttgattttctaagtttctttctcttgaagt 13121623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 11049529 - 11049484
Alignment:
Q  20 tttcactcacccaaggtgtttac-aatgtttcccaacccaagagaa 64  Q
    ||||||| ||||||||||||||| ||||||||||||| ||||||||    
T  11049529 tttcacttacccaaggtgtttacaaatgtttcccaacacaagagaa 11049484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 13569560 - 13569593
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagaga 63  Q
    |||||||||||| |||||||||||||||||||||    
T  13569560 ccaaggtgtttataatgtttcccaacccaagaga 13569593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 315
Target Start/End: Complemental strand, 10445140 - 10445056
Alignment:
Q  232 cgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaac 315  Q
    ||||| ||||||||||| ||  |||||||||||||||||| ||||||   ||  ||||||||| |||| ||||||||||| ||||    
T  10445140 cgtacaacccaaggtactacgtccttatccacaaatcgcgccacgccaagactaaatcgcgccgcgatatgccttcagcaaaaac 10445056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 286; Significance: 1e-160; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 20 - 412
Target Start/End: Complemental strand, 6598951 - 6598558
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6598951 tttcactcactcaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttatctcctttgatttcccaagttttc 6598852  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcg 219  Q
    ||||||||||||||||||||| ||    |||||||||||||||||||||||||||||||| ||||| | |||||||| ||||||||||||||||||||||    
T  6598851 ctctcttgaagttctctctcccctctactcaaaaatgagctgaaacacttaaatagtacatagtgacaaacaaaatcgcgccgcgccagagaaaatcgcg 6598752  T
Q  220 ccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaatcgcgccacgatttgccttcagcagaaaccatc 319  Q
    ||||  |||||||||| | | ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||| |    
T  6598751 ccacggttgaagcgtatggcgcaaggtacgacaaccttatccacaaatcgcgtcacacctgcaccaatcgcgccacgatttgccttcagcataaaccacc 6598652  T
Q  320 cattctaccaccaaaatcgtgacgcgccactcaaaatcgtgtcacaat-tatgagtttccagcaacactaatttgaaggcaaattacaacaata 412  Q
    |||||| ||||||||||||||||| ||||||||||||||| |||| || | |||||||||||||||||||||||||||||||||||||||||||    
T  6598651 cattctgccaccaaaatcgtgacgtgccactcaaaatcgtatcacgatatgtgagtttccagcaacactaatttgaaggcaaattacaacaata 6598558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 20 - 412
Target Start/End: Complemental strand, 6674404 - 6674011
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6674404 tttcactcactcaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttatctcctttgatttcccaagttttc 6674305  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcg 219  Q
    ||||||||||||||||||||| ||    |||||||||||||||||||||||||||||||| ||||| | |||||||| ||||||||||||||||||||||    
T  6674304 ctctcttgaagttctctctcccctctactcaaaaatgagctgaaacacttaaatagtacatagtgacaaacaaaatcgcgccgcgccagagaaaatcgcg 6674205  T
Q  220 ccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaatcgcgccacgatttgccttcagcagaaaccatc 319  Q
    ||||  |||||||||| | | ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||| |    
T  6674204 ccacggttgaagcgtatggcgcaaggtacgacaaccttatccacaaatcgcgtcacacctgcaccaatcgcgccacgatttgccttcagcataaaccacc 6674105  T
Q  320 cattctaccaccaaaatcgtgacgcgccactcaaaatcgtgtcacaat-tatgagtttccagcaacactaatttgaaggcaaattacaacaata 412  Q
    |||||| ||||||||||||||||| ||||||||||||||| |||| || | |||||||||||||||||||||||||||||||||||||||||||    
T  6674104 cattctgccaccaaaatcgtgacgtgccactcaaaatcgtatcacgatatgtgagtttccagcaacactaatttgaaggcaaattacaacaata 6674011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 20 - 270
Target Start/End: Original strand, 41365036 - 41365288
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  41365036 tttcactcacccaaggtgtttacaatgtttcccaacccaaaagaactctaatcaaagaccctcaaccctaaagttacctcatttgatttcacaagttttc 41365135  T
Q  120 ctctcttgaagttctctctccac--ttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcg 217  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||    
T  41365136 ctctcttgaagttctctctccactttttcttcaaaaatgagctgaaacacttaaatagtacacagtgacagacaaaatcgcgccgcgccagagaaaatcg 41365235  T
Q  218 cgccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgc 270  Q
    ||||||  |||||||||| ||||||||||||||||||||||||||| ||||||    
T  41365236 cgccacggttgaagcgtatgacccaaggtacgacaaccttatccaccaatcgc 41365288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 20 - 323
Target Start/End: Original strand, 1292652 - 1292946
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  1292652 tttcactcacccaaggtgttcacagtgtttcccaacccaaaagaactctaatcaaagaccctcaaccctaaagttacctcatttgattttccaagttttc 1292751  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcg 219  Q
    |||||||||||    ||||||||       ||||||||| ||||||| || || |||||| | ||| |||||||||| |||| ||||   ||||||||||    
T  1292752 ctctcttgaag----ctctccac------aaaaaatgagttgaaacattttaacagtacacaatgacagacaaaatcgcgccacgcctacgaaaatcgcg 1292841  T
Q  220 ccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaaccat 318  Q
    ||||| || | |||||||||||||||||||||||| ||||||| |||||| ||||||||| |||  |||||||||| ||||| |||||||||||||||||    
T  1292842 ccacaatttatgcgtacgacccaaggtacgacaactttatccagaaatcgtgtcacgcctatacgaaatcgcgccatgattttccttcagcagaaaccat 1292941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 43036402 - 43036296
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  43036402 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 43036303  T
Q  120 ctctctt 126  Q
    |||||||    
T  43036302 ctctctt 43036296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 15212765 - 15212650
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||      
T  15212765 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcatttgatttcccaagtttct 15212666  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  15212665 ctctcttcaagctctc 15212650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 30143321 - 30143206
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  30143321 tttcactcacccaatgtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 30143222  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  30143221 ctctcttcaagctctc 30143206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 3303859 - 3303968
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  3303859 tttcactcactcaaggtgtttacaatgtttcccaacccaagagaaccctaatcaaagaccctcaaccgtaaagttacctcctttgatttcccaagttttt 3303958  T
Q  120 ctctcttgaa 129  Q
    ||||||||||    
T  3303959 ctctcttgaa 3303968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 4731637 - 4731531
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||      
T  4731637 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttttcaagtttct 4731538  T
Q  120 ctctctt 126  Q
    |||||||    
T  4731537 ctctctt 4731531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 33352129 - 33352023
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||      
T  33352129 tttcaatcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttaccttctttgatttcccaagtttct 33352030  T
Q  120 ctctctt 126  Q
    |||||||    
T  33352029 ctctctt 33352023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 12702828 - 12702942
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||      
T  12702828 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaatttacctcctttgatttcccaagtttct 12702926  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  12702927 ctctcttcaagctctc 12702942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 4733785 - 4733691
Alignment:
Q  23 cactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4733785 cactcatccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcttttgatttcccaagttt 4733691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 10929778 - 10929670
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10929778 tttcactaatccaaggtgtttacaatgtt-cccaacccaagagaactctaatcaaagaccc-caaccctaaagttacctcctttgatttcccaagttttc 10929681  T
Q  120 ctctcttgaag 130  Q
    |||||||||||    
T  10929680 ctctcttgaag 10929670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 42498172 - 42498058
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||      
T  42498172 tttcactcacc-aaggtgtttacaacgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 42498074  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  42498073 ctctcttcaagctctc 42498058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 5689250 - 5689140
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||      
T  5689250 tttcactcacccaaggtgtttacaatgtttccaaactcaagagaaccctaatcaaagaccctcaaccctaaagttatctcctttgatttccctagtttct 5689151  T
Q  120 ctctcttgaag 130  Q
    |||||||||||    
T  5689150 ctctcttgaag 5689140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 28 - 126
Target Start/End: Complemental strand, 10015119 - 10015021
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  10015119 acccaacgtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 10015021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 27811257 - 27811151
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||      
T  27811257 tttcactcacccaaggtgtttacaatgttttccaacctaagagaactctaatcaaagaccctcaaccctaaatttacctcctttgatttcccaattttct 27811158  T
Q  120 ctctctt 126  Q
    |||||||    
T  27811157 ctctctt 27811151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 17982631 - 17982517
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||      
T  17982631 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttct 17982533  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  17982532 ctctcttcaagctctc 17982517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 31218235 - 31218130
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||      
T  31218235 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttct 31218137  T
Q  120 ctctctt 126  Q
    |||||||    
T  31218136 ctctctt 31218130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 1345560 - 1345655
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagt 115  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||    
T  1345560 tttcactcacccaaggtgtttacaatatttcccaactcaagagaactctaatcaaaaaccctcaaccctaaagttacatcctttgattttccaagt 1345655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 18106267 - 18106363
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| | |||||||||  ||||||||||||||||||||    
T  18106267 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaaatctaattaaagaccctctatcctaaagttctctcctttgatttcccaagtt 18106363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 44303832 - 44303717
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   |||||||||||| |||||||      
T  44303832 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgtttcctttgatttctcaagtttct 44303734  T
Q  120 ctctcttgaagttctct 136  Q
    ||||||| ||| |||||    
T  44303733 ctctcttcaagctctct 44303717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 19945550 - 19945664
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||| | ||||||||||||||||||||      
T  19945550 tttcactcacc-aaggtgtttacaatgtttcccgacccaagagaactctaatcaaagactctaaaccctaaagttgcttcctttgatttcccaagtttgt 19945648  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  19945649 ctctcttcaagctctc 19945664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 34254519 - 34254632
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||      
T  34254519 tttcactcacc-aaggtgtttacaatgtctcc-aacccaagagaactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttct 34254616  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  34254617 ctctcttcaagctctc 34254632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 1746408 - 1746513
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| | ||||||||||||||||||||      
T  1746408 tttcactcacc-aaggtgtttacaatgtttcccaaccaaagagaactctaatcaaggaccctaaaccctaaagttgcttcctttgatttcccaagtttct 1746506  T
Q  120 ctctctt 126  Q
    |||||||    
T  1746507 ctctctt 1746513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 18141800 - 18141689
Alignment:
Q  20 tttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||| ||||| || |||||     
T  18141800 tttcactcgcccaaggtgtttacaaatgtttcccaacctaagagaaccctaatcaaagaccctcaaccctaaaattacctccttcgattttcctagtttc 18141701  T
Q  119 cctctcttgaag 130  Q
     |||||||||||    
T  18141700 tctctcttgaag 18141689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 34256704 - 34256790
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  34256704 ccaaggtgtttacaatgtttcc-aacccaagataactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagttt 34256790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 4162479 - 4162381
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    |||||||| | ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||  |||||||    
T  4162479 tttcactcgctcaaggtgtttacaatgttttccaacccaagagaaccctaatcaaagaccctcaaccctaaagttacctcttttaatttcttaagtttt 4162381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 41366803 - 41366879
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 96  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||    
T  41366803 tttcactcacccaaggtgtttacaatgtttcccaatctaagagaactctaatcaaagatcctcaaccctaaagttac 41366879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 29796512 - 29796623
Alignment:
Q  21 ttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||| |||||| | ||||||| ||||||||||||||||||||| ||   |||||| ||||||||||||||||||||||||||||||| |||||||      
T  29796512 ttcactcgcccaagatatttacaaatgtttcccaacccaagagaaccctcgccaaagatcctcaaccctaaagttacctcctttgatttctcaagtttct 29796611  T
Q  120 ctctcttgaagt 131  Q
    ||||||||||||    
T  29796612 ctctcttgaagt 29796623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 4743392 - 4743491
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||| |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||          |||||||||||||||||||    
T  4743392 tttcgctcacccaaggtgtttacaatgtttcccaacccaagagattcctaatcaaagaccctcaaccctaa----------tttgatttcccaagttttc 4743481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 9765729 - 9765629
Alignment:
Q  19 atttcactcacccaaggtgtttacaatgtttcccaacc--caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtt 116  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||   | |||||||| ||||||||| |||||||||||||||  ||||||||||    
T  9765729 atttcactcacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactcaaagacactcaaccctcaagttacctcctttgtattcccaagtt 9765630  T
Q  117 t 117  Q
    |    
T  9765629 t 9765629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 2627711 - 2627615
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    |||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  |||||||||||||||||||  |||||||    
T  2627711 caaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctctctt 2627615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 43 - 135
Target Start/End: Original strand, 19948533 - 19948625
Alignment:
Q  43 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctc 135  Q
    ||||||||||||| ||| |||||||||||||||||| || |||||||||||| | ||||||||||||||||||||  ||||||| ||| ||||    
T  19948533 aatgtttcccaactcaaaagaactctaatcaaagactctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctc 19948625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 40321009 - 40320937
Alignment:
Q  57 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaa 129  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||    
T  40321009 caagagaaccctaatcaaagaccctcaacccgaaagttacctcctttgatttccctagtttctctctcttgaa 40320937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 8153741 - 8153650
Alignment:
Q  20 tttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcc 110  Q
    ||||||||| ||||||||| ||||| ||||||||||||||| |||||  ||||||||||| ||||||| |||| ||||||||||||||||||    
T  8153741 tttcactcatccaaggtgtatacaaatgtttcccaacccaaaagaacattaatcaaagactctcaaccttaaaattacctcctttgatttcc 8153650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 161 - 325
Target Start/End: Complemental strand, 19752139 - 19751973
Alignment:
Q  161 gaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaa-tcgcgccac-atttgaagcgtacgacccaaggtacgacaacctta 258  Q
    |||||||||| |||||||| | ||| |||| ||||| ||||||||| |  |||| ||| ||||| ||||  | ||||||||||||||||| ||| |||||    
T  19752139 gaaacacttatatagtacacaatgacagacgaaatcgcgccgcgcctgctaaaaatcgtgccacgatttttaacgtacgacccaaggtacaacatcctta 19752040  T
Q  259 tccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaaccatccattct 325  Q
    ||||| ||||||| |||||| ||||  ||||||||| |||||||||||||||| ||| ||||||||||    
T  19752039 tccaccaatcgcgccacgccagtactaaatcgcgccgcgatttgccttcagca-aaaacatccattct 19751973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 7412569 - 7412646
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  ||||   ||||||| |||||||||||||||||||||||||    
T  7412569 acccaaggtgtttacaatgtttcccaacccaagagatcctctctacaaagacactcaaccctaaagttacctcctttg 7412646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 30291534 - 30291461
Alignment:
Q  57 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaag 130  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||| || |||||  || ||||||||    
T  30291534 caagagaaccctaatcaaagaccatcaaccctaaagttacctcctttgattttcctagtttctctttcttgaag 30291461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 3318741 - 3318849
Alignment:
Q  24 actcacccaaggtgtttacaa-tgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcct 121  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||| ||  | |||||||||||||||||||||||||||| ||||| ||| ||| |||  ||    
T  3318741 actcacccaaggtgttttcaaatgtttcctaacccaagagaacctcccaccaaagaccctcaaccctaaagttacctcatttgaattctcaactttctct 3318840  T
Q  122 ctcttgaag 130  Q
    || ||||||    
T  3318841 cttttgaag 3318849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 41266949 - 41266837
Alignment:
Q  19 atttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtt 116  Q
    ||||||||||||||| || ||||||| ||| ||||||||||||||||| ||| | |||||||  ||||||||||||||||||| |||||| ||| | |||    
T  41266949 atttcactcacccaaagtatttacaactgtctcccaacccaagagaacctctcaccaaagacattcaaccctaaagttacctcatttgatatcctaggtt 41266850  T
Q  117 ttcctctcttgaa 129  Q
    |  ||||||||||    
T  41266849 tctctctcttgaa 41266837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 23799441 - 23799367
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||| |||||||||||||| | |||   ||||||| |||||||||||||||||||||||||    
T  23799441 caaggtgtttacaatgttccccaacccaagagatcctctctacaaagacactcaaccctaaagttacctcctttg 23799367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 4456257 - 4456334
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    || |||| |||||||||||||||||||||||||    
T  4456257 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacagagacactcaaccctaaagttacctcctttg 4456334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 4696476 - 4696399
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||| |||||||||||||||| ||||||||    
T  4696476 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttatctcctttg 4696399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 5702348 - 5702271
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||| |||||||||||||||||  |||    ||||||| |||||||||||||||||||||||||    
T  5702348 acccaaggtgtttacaatatttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttg 5702271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 19175622 - 19175545
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||| ||||||||  |||    ||||||| |||||||||||||||||||||||||    
T  19175622 acccaaggtgtttacaatgtttcccaatccaagagatcctcactacaaagacactcaaccctaaagttacctcctttg 19175545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 19752262 - 19752185
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||| |||| ||||||||||||||   | | ||||||| |||||||||||||||||||||||||    
T  19752262 acccaaggtgtttacaatatttcacaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctttg 19752185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 402
Target Start/End: Complemental strand, 5990248 - 5990083
Alignment:
Q  238 acccaaggtacgacaaccttatccacaaatcgcgtcacgcctg-taccaatcgcgccacgatttgccttcagcagaaaccatccattctaccaccaaaat 336  Q
    |||||| |||| ||||||||||||| |||||| ||||||||||  || ||||| | |||||||||||||||| | ||||||| | | || || | |||||    
T  5990248 acccaatgtacaacaaccttatccataaatcgtgtcacgcctgccacaaatcgtgtcacgatttgccttcaggaaaaaccatgcttcctgcctcgaaaat 5990149  T
Q  337 cgtgacgcgccactcaaaatcgtgtcacaattatg-agtttccagcaacactaatttgaaggcaaat 402  Q
    || ||| |||| | || ||||||||||| |||||| | |||| |  ||||||||||||||| |||||    
T  5990148 cgcgacacgcctc-cataatcgtgtcacgattatgaactttctaagaacactaatttgaagtcaaat 5990083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 3051349 - 3051458
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    ||||||| |||||||||||||||||||| ||||||||| | | | ||||||| |||||||||||||||  |||||||    ||||||||||  |||||||    
T  3051349 acccaagatgtttacaatgtttcccaactcaagagaaccccactacaaagacactcaaccctaaagttctctcctttatagtcccaagtttctctctctt 3051448  T
Q  127 gaagttctct 136  Q
     ||| |||||    
T  3051449 caagctctct 3051458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 11712189 - 11712302
Alignment:
Q  19 atttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtt 116  Q
    |||||||||| ||||| ||||||||| || |||  ||||||||| ||| ||| | ||||||| |||||||||||||||||||| ||||||  || |||||    
T  11712189 atttcactcatccaagatgtttacaaatgcttcggaacccaagaaaacctctcaccaaagacactcaaccctaaagttacctcatttgataccctaagtt 11712288  T
Q  117 ttcctctcttgaag 130  Q
    |  |||||||||||    
T  11712289 tctctctcttgaag 11712302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 28307791 - 28307868
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||| |||||||||||||||| ||||||||  |  | ||||||| |||||| ||||||||||||||||||    
T  28307791 acccaaggtgttaacaatgtttcccaacctaagagaaccgtgctacaaagacactcaactctaaagttacctcctttg 28307868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 32902413 - 32902486
Alignment:
Q  57 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaag 130  Q
    ||||||||| || | || ||| ||||||||||||||||||||| | |||||||||||||||  |||||||||||    
T  32902413 caagagaaccctcaccatagatcctcaaccctaaagttacctcatctgatttcccaagtttctctctcttgaag 32902486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 5990427 - 5990332
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    ||||| || ||||||||||||||||||||||||||| || |  |||||| ||||||||||||||||||  |||||  || ||||||||  |||||||    
T  5990427 ccaagatgattacaatgtttcccaacccaagagaac-ctcactaaagacactcaaccctaaagttaccgtctttgtatttccaagtttctctctctt 5990332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 376
Target Start/End: Original strand, 41365290 - 41365374
Alignment:
Q  292 ccacgatttgccttcagcagaaaccatccattctaccaccaaaatcgtgacgcgccactcaaaatcgtgtcacaattatgagttt 376  Q
    |||| |||| ||||||||||||||||| | |||| ||| |||||||||| | ||| | ||| ||||||||||| |||||||||||    
T  41365290 ccacaattttccttcagcagaaaccatacgttctgccaacaaaatcgtgtcacgcaattcataatcgtgtcacgattatgagttt 41365374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 127
Target Start/End: Complemental strand, 38863841 - 38863742
Alignment:
Q  30 ccaaggtgtttacaa-tgtttcccaacccaagagaact-ctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttg 127  Q
    ||||| ||||||||| |||||||||||||||||||||| || |  |||||| ||||||| |||||||| ||| |||||||| | ||||||  ||||||||    
T  38863841 ccaagatgtttacaaatgtttcccaacccaagagaactcctcactaaagacactcaaccttaaagttagctcatttgattttcaaagtttctctctcttg 38863742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 7493041 - 7493004
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaac 65  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  7493041 acccaaggtgtttacaatgtttcccaatccaagagaac 7493004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 26403097 - 26403017
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacc--caagagaa-ctctaatcaaagaccctcaaccct-aaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||||  |||||||| |||    ||||||| ||||||||| ||||||||||||||||    
T  26403097 acccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctaaaagttacctcctttg 26403017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 1872173 - 1872227
Alignment:
Q  81 tcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctc 135  Q
    |||||||||||||||| | |||||||||| |||||||  ||||||||||| ||||    
T  1872173 tcaaccctaaagttactttctttgatttctcaagtttctctctcttgaagctctc 1872227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 3231986 - 3232031
Alignment:
Q  21 ttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 65  Q
    ||||| |||||||||||||||| ||||||||||||| |||||||||    
T  3231986 ttcacccacccaaggtgtttactaatgtttcccaactcaagagaac 3232031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 7597543 - 7597470
Alignment:
Q  57 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaag 130  Q
    ||||||||| || | ||||||| || |||| |||||||| |||| |||||||| |||||||  |||||||||||    
T  7597543 caagagaaccctcaccaaagactcttaaccataaagttatctcccttgatttctcaagtttatctctcttgaag 7597470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 19491887 - 19491924
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaaccc 57  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  19491887 tttcactcacccaagatgtttacgatgtttcccaaccc 19491924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 1261820 - 1261741
Alignment:
Q  28 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| |||||||||    
T  1261820 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg 1261741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 6311532 - 6311595
Alignment:
Q  28 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccct 88  Q
    |||||||||| ||||||||  ||||||||||||||||| ||||| | ||||||| |||||||||    
T  6311532 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccct 6311595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 18870424 - 18870361
Alignment:
Q  28 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccct 88  Q
    |||||||||| ||||||||  ||||||||||||||||| ||||| | ||||||| |||||||||    
T  18870424 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccct 18870361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 30291585 - 30291545
Alignment:
Q  20 tttcactcacccaaggtgtttac-aatgtttcccaacccaa 59  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  30291585 tttcaatcacccaaggtgtttacaaatgtttcccaacccaa 30291545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 30655880 - 30655943
Alignment:
Q  28 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccct 88  Q
    |||||||||| ||||||||  ||||||||||||||||| ||||| | ||||||| |||||||||    
T  30655880 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccct 30655943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 283; Significance: 1e-158; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 20 - 409
Target Start/End: Original strand, 39153550 - 39153937
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39153550 tttcattcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 39153649  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcg 219  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||  | |||||||| || |||||||   ||||||| |    
T  39153650 ctctcttgaagttttctctccacttccttcaaaaatgagctgaaacacttaaatagtacacagtg--acacaaaatcgcgtcgcgccatccaaaatcgtg 39153747  T
Q  220 ccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaatcgcgccacgatttgccttcagcagaaaccatc 319  Q
     |||  |||| | |||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||| |||| ||||||||||||||||||||||    
T  39153748 tcacgattgatgagtacgacccaaggtacgacaaccttatccataaatcgcgtcacgcctgcacaaatcgcgtcacgttttgccttcagcagaaaccatc 39153847  T
Q  320 cattctaccaccaaaatcgtgacgcgccactcaaaatcgtgtcacaattatgagtttccagcaacactaatttgaaggcaaattacaaca 409  Q
    |||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  39153848 cattctgccatcaaaatcgtgacgcgccactcaaaatcgtgtcacgattatgagtttccagcaacacgaatttgaaggcaaattacaaca 39153937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 20 - 410
Target Start/End: Complemental strand, 29682338 - 29681948
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  29682338 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagacccttaaccctaaatttaactcctttgatttcccaagttttc 29682239  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcg 219  Q
    ||||| ||||||||||||||  | |||||||||||   ||||||||||||||||||||||  |||| |||||||||| ||||||||||   |||||| ||    
T  29682238 ctctcgtgaagttctctctcttcctccttcaaaaaatggctgaaacacttaaatagtacacggtgacagacaaaatcgcgccgcgccatccaaaatcacg 29682139  T
Q  220 ccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaatcgcgccacgatttgccttcagcagaaaccatc 319  Q
     |||  |||||| ||||||||||||||||||||||||||||||| ||||||||||| |||  |||||||||| ||||||||| |||||||||||||||||    
T  29682138 tcacggttgaagtgtacgacccaaggtacgacaaccttatccaccaatcgcgtcacaccttcaccaatcgcgtcacgatttg-cttcagcagaaaccatc 29682040  T
Q  320 cattctaccaccaaaatcgtgacgcgccactc-aaaatcgtgtcacaattatgagtttccagcaacactaatttgaaggcaaattacaacaa 410  Q
    |||||| ||| ||||||||||||||||||||| ||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||    
T  29682039 cattctgccagcaaaatcgtgacgcgccactcaaaaatcgtgtcacgattatgagtcttcagcaacactaatttgaaggcaaattacaacaa 29681948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 20 - 337
Target Start/End: Complemental strand, 9581262 - 9580944
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  9581262 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttc 9581163  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagac-aaaatcacgccgcgccagagaaaatcgc 218  Q
    ||||||||||||||||||||     || ||||||||||||| |||||||||||||||||| ||||| |||| |||||| | ||||||||| |||||||||    
T  9581162 ctctcttgaagttctctctctttccccatcaaaaatgagcttaaacacttaaatagtacacagtgacagacaaaaatcgcaccgcgccagtgaaaatcgc 9581063  T
Q  219 gccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaacca 317  Q
      |||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |  ||||||||||||||||| |||||||||||||||    
T  9581062 atcacggttgaagcgtacgacccaaggtacgacaaccttatccataaatcgcgtcacgcctgcccaaaatcgcgccacgatttg-cttcagcagaaacca 9580964  T
Q  318 tccattctaccaccaaaatc 337  Q
    |||||||| ||| |||||||    
T  9580963 tccattctgccagcaaaatc 9580944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 20 - 338
Target Start/End: Original strand, 19684078 - 19684397
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  19684078 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttc 19684177  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagac-aaaatcacgccgcgccagagaaaatcgc 218  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||| |||| |||||| | | ||||||| ||||||||     
T  19684178 ctctcttgaagttctctctcctcttccttcaaaaatgagccgaaacacttaaatagtacacagtgacagacaaaaatcgcactgcgccagtgaaaatcgt 19684277  T
Q  219 gccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaacca 317  Q
    | |||  |||||||||||||||||||||||||||||||||| || |||| ||||||||||||  |  ||||| ||||||||||| |||||||| ||||||    
T  19684278 gtcacggttgaagcgtacgacccaaggtacgacaaccttattcataaattgcgtcacgcctgcccaaaatcgtgccacgatttg-cttcagcaaaaacca 19684376  T
Q  318 tccattctaccaccaaaatcg 338  Q
    ||| |||| | | ||||||||    
T  19684377 tccgttctgcaagcaaaatcg 19684397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 20 - 376
Target Start/End: Original strand, 22835191 - 22835547
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22835191 tttcactcacccaaggtgattacaatgtttcccaacacaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgattttccaagttttc 22835290  T
Q  120 ctctcttgaagttctctctc---cacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatc 216  Q
    ||||||||||||||||||||      ||||||||||||||||||||||||||||||||||| | |||||   |||||||| ||||||||||   ||||||    
T  22835291 ctctcttgaagttctctctctcttttttccttcaaaaatgagctgaaacacttaaatagtatacagtga---acaaaatcgcgccgcgccacccaaaatc 22835387  T
Q  217 gcgccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaatcgcgccacgatttgccttcagcagaaacc 316  Q
    | | |||  ||||   |||||||| ||||||||||||||||||||| |||||||||||||| || || |||||||||||||||| |||||||||||||||    
T  22835388 gtgtcacgattgataagtacgacctaaggtacgacaaccttatccataaatcgcgtcacgcatgcacaaatcgcgccacgattttccttcagcagaaacc 22835487  T
Q  317 atccattctaccaccaaaatcgtgacgcgccactcaaaatcgtgtcacaattatgagttt 376  Q
    || | |||| ||| |||||| ||| | | ||| ||| ||||||||||| |||||||||||    
T  22835488 atacgttctgccaacaaaattgtgtcacaccattcataatcgtgtcacgattatgagttt 22835547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 20 - 338
Target Start/End: Complemental strand, 760826 - 760507
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  760826 tttcactcatccaaggtgtttataatgtttcccaacccaagagaactctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttc 760727  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagac-aaaatcacgccgcgccagagaaaatcgc 218  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||| |||||| |   | ||| | ||||||||     
T  760726 ctctcttgaagttctctctcctcttccttcaaaaatgagctgaaacacttaaatagtacacagtgacagacaaaaatctcattgtgcctgtgaaaatcgt 760627  T
Q  219 gccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaacca 317  Q
    |  ||  |||||||||||||||||||||||||||||||||||||||||||||||||||  || ||  ||||||  ||||||||| |||||||| ||||||    
T  760626 gttacggttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacggttgcacaaaatcgcatcacgatttg-cttcagcaaaaacca 760528  T
Q  318 tccattctaccaccaaaatcg 338  Q
    |||||||| ||| ||||||||    
T  760527 tccattctgccagcaaaatcg 760507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 20 - 376
Target Start/End: Original strand, 32744616 - 32744979
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  32744616 tttcactcacc-aatgtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttt 32744714  T
Q  120 ctctcttgaagttctc-tctccacttccttc-aaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcg 217  Q
    ||||||||||| |||| |  ||| || |||| |||||||||||||||||||||||||||||| ||||| ||||||||||  | | |||||   |||||||    
T  32744715 ctctcttgaagctctcttgaccattttcttcaaaaaatgagctgaaacacttaaatagtacacagtgacagacaaaatcgtgtcacgccatccaaaatcg 32744814  T
Q  218 cgccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaatcgcgccacga-tttgccttcagcagaaacc 316  Q
     | |||  |||| | |||||||| ||||||||||||||||||||| ||||||||| ||||||| || ||||| ||||||| |||||||||||||| ||||    
T  32744815 tgtcacgattgatgagtacgaccaaaggtacgacaaccttatccagaaatcgcgttacgcctgcacaaatcgtgccacgattttgccttcagcaggaacc 32744914  T
Q  317 atccattctaccaccaaaatcgtgacgcg-----ccactcaaaatcgtgtcacaattatgagttt 376  Q
    || | |||| ||| |||||||||| | ||     ||||||| ||||||||||| |||||||||||    
T  32744915 atacgttctgccaacaaaatcgtgtcacgtcacaccactcataatcgtgtcacgattatgagttt 32744979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 5236645 - 5236751
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      
T  5236645 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctccttcgatttcccaagtttct 5236744  T
Q  120 ctctctt 126  Q
    |||||||    
T  5236745 ctctctt 5236751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 26386670 - 26386790
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||| || |||||  |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26386670 tttcactcacccaaagtatttaccctgtttcccaacctaagagaactctaatcaaagactctcaaccctaaagttacctcctttgatttcccaagttttc 26386769  T
Q  120 ctctcttgaagttctctctcc 140  Q
    ||||||| |||||||||||||    
T  26386770 ctctctttaagttctctctcc 26386790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 29810847 - 29810749
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29810847 tttcactcacccaaggtgtttacaatgtttcccaacccaaaagaactctaatcaaagaccctcaaccctaaaattacctcctttgatttcccaagtttt 29810749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 40734477 - 40734380
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  40734477 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttatctcctttgattttccaagttt 40734380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 29813042 - 29812936
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||      
T  29813042 tttcactcacccaatgtgtttacaatgcttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 29812943  T
Q  120 ctctctt 126  Q
    |||||||    
T  29812942 ctctctt 29812936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 32891078 - 32890972
Alignment:
Q  24 actcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctct 123  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| |||||||||    
T  32891078 actcacccaaggtgtttacaatgtttcccaccccaagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgactttccaaattttcctct 32890979  T
Q  124 cttgaag 130  Q
    |||||||    
T  32890978 cttgaag 32890972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 5260513 - 5260618
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||      
T  5260513 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttct 5260611  T
Q  120 ctctctt 126  Q
    |||||||    
T  5260612 ctctctt 5260618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 7762244 - 7762148
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7762244 tttcactcacc-aaggtgttcacaatatttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 7762148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 51398793 - 51398696
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    ||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  51398793 tttcactcatccaaggtgtttacaatatttcccaacccaagaaaactctaatcaaagactctcaaccctaaagttacctcctttgatttcccaagttt 51398696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 16499009 - 16498893
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||  |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||    
T  16499009 tttcactaccccaaggtgtttacaatgtttctcaacctaagagaactctaatcaaagaccctcaacccacaagttacctcctttgatttcccaagttgtc 16498910  T
Q  120 ctctcttgaagttctct 136  Q
     |||||||||| |||||    
T  16498909 atctcttgaagctctct 16498893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 40735352 - 40735256
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  40735352 ccaaggtgtttacaatgtttcctaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctctt 40735256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 53921692 - 53921807
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||| |||||||||||| ||||||||||| ||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||     
T  53921692 tttcactcacccaaggtttttacaatgttttccaacccaagaaaaccctaatcaaagactctcaaccctaaagttacctcatttgatttcccaagttttt 53921791  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  53921792 ctctcttcaagctctc 53921807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 7764446 - 7764341
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||      
T  7764446 tttcactcacc-aaggtgtttacaatgtttcctaacccaagagaaatctaatcaaagaccctcaactctaaagttacctcctttgatttcccaagtttct 7764348  T
Q  120 ctctctt 126  Q
    |||||||    
T  7764347 ctctctt 7764341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 45095143 - 45095038
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||      
T  45095143 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcctcttttgatttcccaagtttct 45095045  T
Q  120 ctctctt 126  Q
    |||||||    
T  45095044 ctctctt 45095038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 37408426 - 37408332
Alignment:
Q  32 aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||  |||||||    
T  37408426 aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccataaaccctaaagttgcctcctttgatttcccaagtttctctctctt 37408332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 9666656 - 9666767
Alignment:
Q  20 tttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||||||||||||||||| |||||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||| |     
T  9666656 tttcactcacccaaggtgtttacaaatgtttcccaactgaagagaaccctaatcaaagaccctcaaccctaaagttacctcatttgatttccctagtgtc 9666755  T
Q  119 cctctcttgaag 130  Q
     |||||||||||    
T  9666756 tctctcttgaag 9666767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 5258334 - 5258439
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |  ||||||||||| |||||||      
T  5258334 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagtttctccctttgatttctcaagtttct 5258432  T
Q  120 ctctctt 126  Q
    |||||||    
T  5258433 ctctctt 5258439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 9636316 - 9636422
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||| | ||||||||||||||||||||     
T  9636316 tttcactcacc-aaggtgtttacaatatttcccaacccaagagagactctaatcaaagaccctaaaccctaaagtttcttcctttgatttcccaagtttc 9636414  T
Q  119 cctctctt 126  Q
     |||||||    
T  9636415 tctctctt 9636422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 23200326 - 23200432
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||| |  |||||||||||||||||||     
T  23200326 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaaactctaatcaaagaccctaaaccctagagttgctccctttgatttcccaagtttc 23200424  T
Q  119 cctctctt 126  Q
     |||||||    
T  23200425 tctctctt 23200432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 29196576 - 29196707
Alignment:
Q  20 tttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaact-------------ctaatcaaagaccctcaaccctaaagttacctcctttga 105  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||              |||||||||||||||||||||||||||||||||||||||    
T  29196576 tttcactcacccaaggtgtttacaaatgtttcccaacccaagagaacctctcaagaaaaccctaatcaaagaccctcaaccctaaagttacctcctttga 29196675  T
Q  106 tttcccaagttttcctctcttgaagttctctc 137  Q
    ||||||||||||| |||||||| || ||||||    
T  29196676 tttcccaagtttttctctcttgtagctctctc 29196707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 44331524 - 44331437
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||    
T  44331524 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaa----------tcaaccctaaagttacctcctttgatttcccaagttt 44331437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 23198127 - 23198233
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagag-aactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||| |  |||||||||| ||||||||     
T  23198127 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaaactctaatcaaagaccctaaaccctagagttgctccctttgattttccaagtttc 23198225  T
Q  119 cctctctt 126  Q
     |||||||    
T  23198226 tctctctt 23198233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 28 - 325
Target Start/End: Complemental strand, 3323548 - 3323259
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaatc-aaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    ||||||||||||||||||||||||||||||||||||||   | |  |||||| |||||||||||||||||||||||||   ||  ||||||  ||||||     
T  3323548 acccaaggtgtttacaatgtttcccaacccaagagaacctcactataaagacactcaaccctaaagttacctcctttgtaatcg-aagtttgtctctcta 3323450  T
Q  127 gaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcgccac-at 225  Q
     ||  |||||||| |    || ||||        ||||||||||||||||||| ||||| ||||||| || ||||||||| |  | ||||| ||||  ||    
T  3323449 aaatctctctctcaaaaatctgcaaa--------gaaacacttaaatagtacacagtgacagacaaa-tcgcgccgcgcctgtcagaatcgtgccatgat 3323359  T
Q  226 ttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaaccatccattc 324  Q
    || || ||||||||||||||||| ||  |||||||||||||||||| |||||| ||||  ||||||||| | |||||||||||||| ||| |||||||||    
T  3323358 tttaaacgtacgacccaaggtacaacgtccttatccacaaatcgcgccacgccagtactaaatcgcgccgcaatttgccttcagca-aaaacatccattc 3323260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 44700667 - 44700791
Alignment:
Q  20 tttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactc-------------taatcaaagaccctcaaccctaaagttacctcctttga 105  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |             |||||||||||| |||||||||||||||||||||||||    
T  44700667 tttcactcacccaaggtgtttacaaatgtttcccaacccaagagaacccctcaagataaccctaatcaaagaccatcaaccctaaagttacctcctttga 44700766  T
Q  106 tttcccaagttttcctctcttgaag 130  Q
    |||||| |||||  |||||||||||    
T  44700767 tttccctagtttctctctcttgaag 44700791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 801067 - 800980
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| |||| | ||||||||||||||||||||    
T  801067 caaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagtttcttcctttgatttcccaagttt 800980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 5373191 - 5373093
Alignment:
Q  32 aaggtgtttac-aatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaa 129  Q
    ||||||||||| |||||||||||||||||||||||  | | ||||||| ||||||| |||||||||||||||||||||  |||||||  ||||||||||    
T  5373191 aaggtgtttaccaatgtttcccaacccaagagaaccttcaccaaagactctcaaccttaaagttacctcctttgatttttcaagtttctctctcttgaa 5373093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 161 - 338
Target Start/End: Original strand, 37466648 - 37466826
Alignment:
Q  161 gaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcgccacatttgaagcgtacgacccaaggtacgacaaccttatc 260  Q
    |||||||||| |||||||| ||||| ||||||||||  |  ||||| |  | |||||||||||  |  || | |||||| |||||||| || || |||||    
T  37466648 gaaacacttacatagtacacagtgacagacaaaatcgtgttgcgcctgtcagaatcgcgccacggtataaacatacgactcaaggtacaacgactttatc 37466747  T
Q  261 cacaaatcgcgtcacgcctgtaccaa-tcgcgccacgatttgccttcagcagaaaccatccattctaccaccaaaatcg 338  Q
    ||||||||||| |||||| |||| || ||| ||| || |||||||||||||||||||||||||||| |||  |||||||    
T  37466748 cacaaatcgcgccacgccagtactaaatcgtgccgcggtttgccttcagcagaaaccatccattctgccatgaaaatcg 37466826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 39032411 - 39032335
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||| ||||||||||||| |||    ||||||| |||||||||||||||||||||||||    
T  39032411 acccaaggtgtttacaatgtttaccaacccaagagatctcactacaaagacactcaaccctaaagttacctcctttg 39032335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 16264578 - 16264655
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat--caaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||||||||||| | || ||  ||||||| |||||||||||||||||||||||||    
T  16264578 acccaaggtgtttacaatgtttcccaacccaagagatc-ctcattacaaagacactcaaccctaaagttacctcctttg 16264655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 23392098 - 23392205
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||    ||||||| |||||||||||| ||  ||||||||   ||||||||||     
T  23392098 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaatttctctcctttgcagtcccaagtttc 23392197  T
Q  119 cctctctt 126  Q
     |||||||    
T  23392198 tctctctt 23392205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 24695024 - 24694946
Alignment:
Q  27 cacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||||||||||||  |||    ||||||| |||||||||||||||||||||||||    
T  24695024 cacccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttg 24694946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 2075300 - 2075368
Alignment:
Q  61 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaag 130  Q
    |||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||  |||||||||||    
T  2075300 agaactctaatcaaagactctcaaccctaaagtta-ctcatttgatttcccaagtttctctctcttgaag 2075368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 40592639 - 40592562
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||| |||||||||||||||||||||||||    
T  40592639 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttg 40592562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 23410518 - 23410625
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| |||    ||||||| |||||||||||||||  ||||||||   ||||||||||     
T  23410518 tttcactcactcaaggtgtttacaatgttttccaacccaagagaacctcactacaaagacactcaaccctaaagttctctcctttgcaatcccaagtttc 23410617  T
Q  119 cctctctt 126  Q
     |||||||    
T  23410618 tctctctt 23410625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 4386831 - 4386757
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||| |||||||||||||||||||||||||| |||    ||||||| |||||||||||||||||||||||||    
T  4386831 caaggtgattacaatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctttg 4386757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 21711454 - 21711528
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||||||||  |||    ||||||| |||||||||||||||||||||||||    
T  21711454 caaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttg 21711528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 233 - 338
Target Start/End: Complemental strand, 46860028 - 46859924
Alignment:
Q  233 gtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaa-tcgcgccacgatttgccttcagcagaaaccatccattctaccacc 331  Q
    |||||| ||||||||| || |||||||||| |||||| ||||||| || || || |||||||||||||||| |||||||||||||||||||| | ||| |    
T  46860028 gtacgatccaaggtacaacgaccttatccagaaatcgtgtcacgc-tgcacaaaatcgcgccacgatttgc-ttcagcagaaaccatccattttgccagc 46859931  T
Q  332 aaaatcg 338  Q
    |||||||    
T  46859930 aaaatcg 46859924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 1736161 - 1736084
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||||||| |||  |||    ||||||| |||||||||||||||||||||||||    
T  1736161 acccaaggtgtttacaatgtttcccaacccaatagatcctcactacaaagacactcaaccctaaagttacctcctttg 1736084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 6794572 - 6794495
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||| |||||||| |||    ||| ||| |||||||||||||||||||||||||    
T  6794572 acccaaggtgtttacaatgtttcccaactcaagagaacctcactacaatgacactcaaccctaaagttacctcctttg 6794495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 8370346 - 8370269
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||| ||||||||||||||||||||||||||||  |||    ||||||| |||||||||||||||||||||||||    
T  8370346 acccaagatgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttg 8370269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 27974809 - 27974732
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||| ||||||||||  |||    ||||||| |||||||||||||||||||||||||    
T  27974809 acccaaggtgtttacaatgtttcccgacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttg 27974732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 27986313 - 27986236
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||| ||||||||||||||| |||||||||    
T  27986313 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttccctcctttg 27986236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 31314424 - 31314379
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaac 65  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  31314424 tttcactcacccaaagtgtttacaatgtttcccaacccaagagaac 31314379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 36029322 - 36029399
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||| |||||||||||| ||||||||||||    
T  36029322 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaatttacctcctttg 36029399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 47649799 - 47649891
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacc--caagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||||||||||||||||||  |||||||| |||    ||||||| |||||||||||||||| ||||||||  |||||||||||    
T  47649799 acccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctaaagttatctcctttgtattcccaagttt 47649891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 47923761 - 47923684
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||| ||||| |||||||||||||||||||    
T  47923761 acccaaggtgtttacaatgtttcccaacccaagagattctcactacaaagacactcaatcctaaagttacctcctttg 47923684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 48438445 - 48438521
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||| |||||| |  || | ||||||| |||||||||||||||||||||||||    
T  48438445 acccaaggtgtttacaatgtttcccaacc-aagagatccttactacaaagacactcaaccctaaagttacctcctttg 48438521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 26299217 - 26299293
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctccttt 103  Q
    ||||||||||||||||||||||||||||||||||||  |||    |||||||  |||||||||||||||||||||||    
T  26299217 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacattcaaccctaaagttacctccttt 26299293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 1417341 - 1417271
Alignment:
Q  35 gtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||| |||   | | ||||||| |||||||||||||||||||||||||    
T  1417341 gtgtttacaatgtttcccaacccaagataacctcactacaaagacactcaaccctaaagttacctcctttg 1417271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 3715859 - 3715767
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacc--caagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||||||||||||||||||  |||||||| |||    |||||||  ||||||||||||||||||||||||  ||| |||||||    
T  3715859 acccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacattcaaccctaaagttacctcctttgtattctcaagttt 3715767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 27026935 - 27027012
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||| | |||||||| |   | | ||||||| |||||||||||||||||||||||||    
T  27026935 acccaaggtgtttacaatgtttccctatccaagagatcctcagtacaaagacactcaaccctaaagttacctcctttg 27027012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 3328214 - 3328138
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctccttt 103  Q
    |||||||||||||||||||||| |||||||||||||| |||    |||||||  ||||||||||||||| |||||||    
T  3328214 acccaaggtgtttacaatgttttccaacccaagagaagctcactacaaagacattcaaccctaaagttatctccttt 3328138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 27453189 - 27453264
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||| ||||||||||||| | || |  | |||| ||||||||||||||| |||||||||    
T  27453189 acccaaggtgtttacaatgtttgccaacccaagagatc-ctcactacagacactcaaccctaaagttccctcctttg 27453264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 26928456 - 26928421
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga 63  Q
    ||||||||||||||||||||||||||||||||||||    
T  26928456 acccaaggtgtttacaatgtttcccaacccaagaga 26928421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 3328089 - 3327973
Alignment:
Q  161 gaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcgccac-atttgaagcgtacgacccaaggtacgacaaccttat 259  Q
    |||||||||||||||||| | |||| ||||||| || ||||||||| |  | ||||| ||||| |||| || |||| |||||||||||| ||  ||||||    
T  3328089 gaaacacttaaatagtacca-gtgacagacaaa-tcgcgccgcgcctgtcagaatcgtgccacgattttaaacgtatgacccaaggtacaacgtccttat 3327992  T
Q  260 ccacaaatcgcgtcacgcc 278  Q
    |||||||||||| ||||||    
T  3327991 ccacaaatcgcgccacgcc 3327973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 6716476 - 6716391
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagt 115  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| ||||||  |||||||||||||||||    
T  6716476 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttactccctttgatttcccaagt 6716391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 6718660 - 6718575
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagt 115  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| ||||||  |||||||||||||||||    
T  6718660 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttactccctttgatttcccaagt 6718575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 25929246 - 25929176
Alignment:
Q  35 gtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||| ||||| |||||||||   | | ||||||| |||||||||||||||||||||||||    
T  25929246 gtgtttacaatgttttccaactcaagagaacctcactacaaagacactcaaccctaaagttacctcctttg 25929176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 27038279 - 27038357
Alignment:
Q  27 cacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||| ||||||||||  |||    ||||| | |||||||||||||||| ||||||||    
T  27038279 cacccaaggtgtttacaatgtttccctacccaagagatcctcactacaaaggcactcaaccctaaagttatctcctttg 27038357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 40844887 - 40844961
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||| |||||||| ||| |   | | ||||||| |||||||||||||||||||||||||    
T  40844887 caaggtgtttacaatgtttctcaacccaatagatcctcactacaaagacactcaaccctaaagttacctcctttg 40844961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 338
Target Start/End: Original strand, 41820134 - 41820238
Alignment:
Q  233 gtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaa-tcgcgccacgatttgccttcagcagaaaccatccattctaccacc 331  Q
    |||||||||||||||| ||  ||||||| | |||||| ||||| | || || || ||| |||||||||||| |||||||||||||||||||||| ||| |    
T  41820134 gtacgacccaaggtacaacgtccttatctagaaatcgtgtcacac-tgcacaaaatcgtgccacgatttgc-ttcagcagaaaccatccattctgccagc 41820231  T
Q  332 aaaatcg 338  Q
    |||||||    
T  41820232 aaaatcg 41820238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 8126859 - 8126892
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaaga 61  Q
    ||||||||||||||||||||||||||||||||||    
T  8126859 acccaaggtgtttacaatgtttcccaacccaaga 8126892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 25796009 - 25796101
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||||| |||||||||||||  |||||| |   | | ||||||| ||||||||| |||||||||||||||  |||||||||||    
T  25796009 acccaaggtgtttacattgtttcccaaccctcaagagagcctcactacaaagacactcaaccctcaagttacctcctttgtattcccaagttt 25796101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 32143552 - 32143629
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||| ||||||||||||| | ||    ||||||| |||||||||| |||| |||||||||    
T  32143552 acccaaggtgtttacaatgttttccaacccaagagatcatcactacaaagacactcaaccctagagttccctcctttg 32143629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 33386532 - 33386455
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||| ||||||||||||  |||    ||||||| |||||||||||||||  ||||||||    
T  33386532 acccaaggtgtttacaatgtttctcaacccaagagatcctcactacaaagacactcaaccctaaagttctctcctttg 33386455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 37466524 - 37466601
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||| |||||||||||||||||||||| ||||||| |||    ||||||| |||| | ||||||||||||||||||    
T  37466524 acccaaagtgtttacaatgtttcccaacctaagagaacctcactacaaagacactcagctctaaagttacctcctttg 37466601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 1313993 - 1314037
Alignment:
Q  19 atttcactcacccaaggtgtttac-aatgtttcccaacccaagag 62  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  1313993 atttcactcacccaaggtgtttacaaatgtttcccaatccaagag 1314037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 8166705 - 8166757
Alignment:
Q  77 accctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaa 129  Q
    ||||||||||||||||||||||| ||| ||||||||| |||  ||||||||||    
T  8166705 accctcaaccctaaagttacctcattttatttcccaaatttctctctcttgaa 8166757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 51352378 - 51352426
Alignment:
Q  81 tcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaa 129  Q
    ||||||||||| |||||||||||||||||| ||||||  ||||||||||    
T  51352378 tcaaccctaaaattacctcctttgatttccgaagtttctctctcttgaa 51352426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 29100408 - 29100485
Alignment:
Q  43 aatgtttcccaacccaagaga---actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||| |||| |   ||||| | ||||||| |||||||||||| || ||||||||| ||||||||||||    
T  29100408 aatgtttcccaacctaagaaataaactctcaccaaagacactcaaccctaaacttccctcctttggtttcccaagttt 29100485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 59
Target Start/End: Original strand, 35925707 - 35925738
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaa 59  Q
    ||||||||||||||||||||||||||||||||    
T  35925707 acccaaggtgtttacaatgtttcccaacccaa 35925738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 5366180 - 5366092
Alignment:
Q  28 acccaaggtgtttacaa-tgtttcccaacccaagaga---actctaatcaaagaccctcaaccctaaagttacctcctttgatttccca 112  Q
    ||||||||||||||||| ||||| ||||| ||||| |   ||||| | ||||||| |||||||||||||||| ||||| || |||||||    
T  5366180 acccaaggtgtttacaaatgttttccaactcaagaaataaactctcaccaaagactctcaaccctaaagttatctcctatggtttccca 5366092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 25637404 - 25637320
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagt 115  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| || |||| |||||||||||||||||    
T  25637404 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagatacc-cctttgatttcccaagt 25637320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 29 - 59
Target Start/End: Complemental strand, 30709645 - 30709615
Alignment:
Q  29 cccaaggtgtttacaatgtttcccaacccaa 59  Q
    |||||||||||||||||||||||||||||||    
T  30709645 cccaaggtgtttacaatgtttcccaacccaa 30709615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 54635101 - 54635016
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagt 115  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  |||||||||||||||||    
T  54635101 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagt 54635016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 7782375 - 7782436
Alignment:
Q  65 ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    |||||||||||||| || || |||| ||||||  |||||||||||||||||||  |||||||    
T  7782375 ctctaatcaaagactctaaaacctagagttactccctttgatttcccaagtttctctctctt 7782436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 28253896 - 28253941
Alignment:
Q  72 caaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||| ||||||||||||||||| ||| |||||||||| ||||||    
T  28253896 caaagatcctcaaccctaaagttatctcatttgatttcctaagttt 28253941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 228; Significance: 1e-125; HSPs: 79)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 20 - 338
Target Start/End: Original strand, 38671411 - 38671729
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38671411 tttcgctcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 38671510  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcg 219  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| || |||||||||     
T  38671511 ctctcttgaagttctctctcttcttccttcaaaaatgagctgaaacacttaaatagtacaaagtgacagacaaaatcgcgccgcgctagtgaaaatcgca 38671610  T
Q  220 ccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaaccat 318  Q
    ||||  |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||  ||||||||||||||||| ||| || | |||||||    
T  38671611 ccacggttgaagcgtacgacccaaggcacgacaaccttatccacaaattgcgtcacgcctgcacaaaatcgcgccacgatttg-ctttagtaaaaaccat 38671709  T
Q  319 ccattctaccaccaaaatcg 338  Q
    ||||||| ||| ||||||||    
T  38671710 ccattctgccagcaaaatcg 38671729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 20 - 335
Target Start/End: Original strand, 41649199 - 41649514
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||| ||||||||||||||||||||||     
T  41649199 tttcacttacccaaggtgtttacaatgtttcccaacccaagagaactctaataaaagacctt-aaccctaaagttaactcctttgatttcccaagttttg 41649297  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagac-aaaatcacgccgcgccagagaaaatcgc 218  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||| ||||| |||| ||||||  | |||||||| |||||||||    
T  41649298 ctctcttgaagttctctctctccttccttcaaaaatgagctaaaacacttaaatagtacacagtgacagacaaaaatcgtgtcgcgccagtgaaaatcgc 41649397  T
Q  219 gccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaacca 317  Q
    |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||| ||||||||||||| ||| |||||||||||    
T  41649398 gccacggttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgcacaaaattgcgccacgatttg-cttaagcagaaacca 41649496  T
Q  318 tccattctaccaccaaaa 335  Q
    |||||||| ||| |||||    
T  41649497 tccattctgccagcaaaa 41649514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 20 - 368
Target Start/End: Complemental strand, 25615842 - 25615487
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||| ||||||||    
T  25615842 tttctctcacccaaggtgtttacaatgttttccaacccaagagaactctaatcaaagacccttaaccttaaagttaactcctttgatttcctaagttttc 25615743  T
Q  120 ctctcttgaagttctctctc-----cact-tccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaa-tcacgccgcgccagagaa 212  Q
    ||||||||||||||||||||     | || |||||||||||||||||||||||||||||||||||| ||||| |  ||||| || |||||| || | |||    
T  25615742 ctctcttgaagttctctctctctctctctctccttcaaaaatgagctgaaacacttaaatagtacacagtgacatgcaaaaatcgcgccgcacctgggaa 25615643  T
Q  213 aatcgcgccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcag 311  Q
    ||||||| |||  ||||||||||||||||||||||||||||||||||| ||||||||  ||||| ||| ||  ||||||||||||||||| |||||||||    
T  25615642 aatcgcgtcacggttgaagcgtacgacccaaggtacgacaaccttatcgacaaatcgtatcacggctgcacaaaatcgcgccacgatttg-cttcagcag 25615544  T
Q  312 aaaccatccattctaccaccaaaatcgtgacgcgccactcaaaatcgtgtcacaatt 368  Q
    |||||||||||||| ||| |||||||| | | |||| || ||||||| | |||||||    
T  25615543 aaaccatccattctgccagcaaaatcgcgccacgcctctgaaaatcgcgccacaatt 25615487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 410 - 607
Target Start/End: Original strand, 26632490 - 26632687
Alignment:
Q  410 atatctatatattcattttttatatcagaagaaaaactgtacatatatcagactgtcatgttccagaagaaagatcattcgaaggtagggaacggtttcc 509  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26632490 atatctatatattcaatttttatatcaaaagaaaaactgtacatatatcagactgtcatgttccagaagaaagatcagtcgaaggtagggaacggtttcc 26632589  T
Q  510 cttccaatcatcgcatacaattatgagggatttaattagaatggaccctatctagggttgcaatttgcgatcaccaatagttttatttgacctttgct 607  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| || |||||||||||||||||||||    
T  26632590 cttccaatcatcgcagacaattatgagggatttaattagaatggaccctatctatggttgcaatttgtgatcagcactagttttatttgacctttgct 26632687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 20 - 338
Target Start/End: Complemental strand, 31518774 - 31518465
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||| |||||| ||||||||| |||||  |||||||||||||| ||||||||||||| |||||||||||||| ||||||||    
T  31518774 tttcactcacccaaggtgtttacgatgttttccaacccaaaagaaccataatcaaagacccttaaccctaaagttatctcctttgatttccaaagttttc 31518675  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcg 219  Q
    ||||||||||| ||||||          |  ||||||| ||||||   ||| |||||||| | ||| |||||||||   |||||||| ||||||||||||    
T  31518674 ctctcttgaagctctctc----------tagaaaatgaactgaaatgtttatatagtacacaatgaaagacaaaattgtgccgcgcctgagaaaatcgcg 31518585  T
Q  220 ccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaaccat 318  Q
    ||||| ||    | ||||||||||||||||||||||||||||| ||||||| ||||||||| ||  |||||| ||||||||| ||||||||| |||||||    
T  31518584 ccacaattatttcatacgacccaaggtacgacaaccttatccagaaatcgcatcacgcctgcacaaaatcgcaccacgatttaccttcagcataaaccat 31518485  T
Q  319 ccattctaccaccaaaatcg 338  Q
    |||||||||||  |||||||    
T  31518484 ccattctaccaggaaaatcg 31518465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 410 - 561
Target Start/End: Original strand, 26640359 - 26640515
Alignment:
Q  410 atatctatatattcattttttatatcagaagaaaaactgtac-----atatatcagactgtcatgttccagaagaaagatcattcgaaggtagggaacgg 504  Q
    |||||||||||||||||||| |||| | ||||||||||||||     |||||||||||||||||| ||||||||||||||||||| ||||||||||| ||    
T  26640359 atatctatatattcatttttgatatgaaaagaaaaactgtactagagatatatcagactgtcatggtccagaagaaagatcattccaaggtagggaaggg 26640458  T
Q  505 tttcccttccaatcatcgcatacaattatgagggatttaattagaatggaccctatc 561  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  26640459 tttcccttccaatcatggcagacaattatgagggatttaattagaatggaccctatc 26640515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 410 - 605
Target Start/End: Original strand, 26616965 - 26617164
Alignment:
Q  410 atatctatatattcattttttatatcagaagaaaaactgtac-----atatatcagactgtcatgttccagaagaaagatcattcgaaggtagggaacgg 504  Q
    ||||||||||||||||||||||||||| ||||||||||||||     |||||||||||||||||| |||||||||||| |||||||||||||||||  ||    
T  26616965 atatctatatattcattttttatatcaaaagaaaaactgtactagagatatatcagactgtcatggtccagaagaaagttcattcgaaggtagggagggg 26617064  T
Q  505 tttcccttccaatcatcgcatacaat-tatgagggatttaattagaatggaccctatctagggttgcaatttgcgatcaccaatagttttatttgacctt 603  Q
    ||||||||||||||||  |||||| | ||||||||| ||||||  ||||||||| ||||| |||||||||||| ||| |||| |||||||||||||||||    
T  26617065 tttcccttccaatcatgacatacattatatgagggacttaatt-taatggaccccatcta-ggttgcaatttgtgattaccactagttttatttgacctt 26617162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 43864223 - 43864117
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||      
T  43864223 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 43864124  T
Q  120 ctctctt 126  Q
    |||||||    
T  43864123 ctctctt 43864117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 47676325 - 47676431
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||      
T  47676325 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttatctcctttgatttcccaagtttct 47676424  T
Q  120 ctctctt 126  Q
    |||||||    
T  47676425 ctctctt 47676431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 48489410 - 48489313
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  48489410 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccatcaaccctaaagttacctcctttgatttcccaagttt 48489313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 4586137 - 4586034
Alignment:
Q  23 cactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctc 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||    
T  4586137 cactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagagcctcaaccctaaagttacatcctttgatttcccaagtttttctc 4586038  T
Q  123 tctt 126  Q
    ||||    
T  4586037 tctt 4586034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 1113636 - 1113530
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||      
T  1113636 tttcactcacccaagttgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacttcctttgatttcccaagtttct 1113537  T
Q  120 ctctctt 126  Q
    |||||||    
T  1113536 ctctctt 1113530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 14070022 - 14070128
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||      
T  14070022 tttcactcacccaaggtgtttacaatgttacccaacccaagagaactctaatcaaagaccctcagccctaaagttacctcctttgatttcccaagtttct 14070121  T
Q  120 ctctctt 126  Q
    |||||||    
T  14070122 ctctctt 14070128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 14380050 - 14380156
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||      
T  14380050 tttcactcacccaaggtgtttacaatgttacccaacccaagagaactctaatcaaagaccctcagccctaaagttacctcctttgatttcccaagtttct 14380149  T
Q  120 ctctctt 126  Q
    |||||||    
T  14380150 ctctctt 14380156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 31105582 - 31105692
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||||| || ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31105582 tttcactcacccaaggtgtttacaatgtttctcaccccaagataactataatcaaagaccctcaaccctaaagttacctcctttgatttctcaagttttc 31105681  T
Q  120 ctctcttgaag 130  Q
    |||||||||||    
T  31105682 ctctcttgaag 31105692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 496172 - 496329
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaag-tttt 118  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||    
T  496172 tttcactcacccaaggtttttacaatgtttcccaatccaagagaactctaatcaaagaccctcaaccttaaagttacctcatttgatttcccaagttttt 496271  T
Q  119 cctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagt 176  Q
     ||||||||||  | ||||||  | ||  | |||||||||||||||| ||||||||||    
T  496272 tctctcttgaacctttctctcatcctctcttaaaaatgagctgaaacgcttaaatagt 496329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 18126623 - 18126526
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18126623 tttcactcacccaagttgtttacaatgtttcccaacccatgagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 18126526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 415 - 605
Target Start/End: Complemental strand, 26652469 - 26652275
Alignment:
Q  415 tatatattcattttttatatcagaagaaaaactgtac-----atatatcagactgtcatgttccagaagaaagatcattcgaaggtagggaacggtttcc 509  Q
    |||||||||||||||||||||| ||||||||||||||     |||||||||| ||||||| |||||||||||| |||||||||||||||||| |||| ||    
T  26652469 tatatattcattttttatatcaaaagaaaaactgtactagatatatatcagattgtcatggtccagaagaaagttcattcgaaggtagggaagggttccc 26652370  T
Q  510 cttccaatcatcgcatacaat-tatgagggatttaattagaatggaccctatctagggttgcaatttgcgatcaccaatagttttatttgacctttg 605  Q
    |||||||||||  |||||| | ||||||||| ||||||  ||||||||||| ||| || ||||||||| |||| ||| |||||||||||||||||||    
T  26652369 cttccaatcatgacatacattatatgagggacttaatt-taatggaccctaccta-ggctgcaatttgtgatctccactagttttatttgacctttg 26652275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 24526086 - 24526201
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||||||     
T  24526086 tttcactcacccaaggtgtttacaatgtttcccaacctaagagaaccataatcaaagaccctcaaccctaaagttatctcctttgatttccctagttttt 24526185  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||||||| ||||    
T  24526186 ctctcttgaagctctc 24526201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 31733158 - 31733264
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||      
T  31733158 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaactctaaagttacctcttttgatttctcaagtttct 31733257  T
Q  120 ctctctt 126  Q
    |||||||    
T  31733258 ctctctt 31733264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 48491558 - 48491452
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||      
T  48491558 tttcactcacccaaagtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttatcaagtttct 48491459  T
Q  120 ctctctt 126  Q
    |||||||    
T  48491458 ctctctt 48491452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 2761491 - 2761606
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||      
T  2761491 tttcactcacccaatgtgtttacaatgtttcccaacccaagagaactctaatcaaatatcatcaaccctaaagttacctcctttgatttcccaagtttat 2761590  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  2761591 ctctcttcaagctctc 2761606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 30024921 - 30025036
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||| ||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  30024921 tttcactcacccaaggtgtttacaacgtttttcaacctaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 30025020  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  30025021 ctctcttcaagctctc 30025036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 47674132 - 47674238
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||      
T  47674132 tttcactcacccaaggtgtttacaatgttttccaacccaagagaactctaatcaaagaccttcaaccttgaagttacctcctttgatttcccaagtttct 47674231  T
Q  120 ctctctt 126  Q
    |||||||    
T  47674232 ctctctt 47674238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 19502147 - 19502042
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaa 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||  ||||||| ||    
T  19502147 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcatttgatttctcaagtttgtctctctttaa 19502048  T
Q  130 gttctc 135  Q
    | ||||    
T  19502047 gctctc 19502042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 23555018 - 23554904
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||      
T  23555018 tttcactcacc-aaggtgtttacaatgtttcccaactcaagagaactctaatcaaagaccttcaaccctgaagttacctcctttgatttcccaagtttct 23554920  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  23554919 ctctcttcaagctctc 23554904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 24514950 - 24515055
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||      
T  24514950 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttct 24515048  T
Q  120 ctctctt 126  Q
    |||||||    
T  24515049 ctctctt 24515055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 26417284 - 26417198
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26417284 caaggtgtttacaatgtttcccaatccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagttt 26417198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 29991033 - 29990928
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||      
T  29991033 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgtctcctttgatttcccaagtttct 29990935  T
Q  120 ctctctt 126  Q
    |||||||    
T  29990934 ctctctt 29990928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 4538729 - 4538826
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| |||| |||||||||||||||||||||||||    
T  4538729 tttcactcacccaaggtgtttacaatttttcccaacccaagagaattctaatcaaagactctcaaccttaaaattacctcctttgatttcccaagttt 4538826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 453 - 605
Target Start/End: Original strand, 26609816 - 26609968
Alignment:
Q  453 tatatcagactgtcatgttccagaagaaagatcattcgaaggtagggaacggtttcccttccaatcatcgcatacaat-tatgagggatttaattagaat 551  Q
    ||||||||| ||||||| |||||||||||| |||||||||||||||||| ||||  ||||||||||||  |||||| | ||||||||| |||| |  |||    
T  26609816 tatatcagattgtcatggtccagaagaaagttcattcgaaggtagggaagggttctccttccaatcatgacatacattatatgagggacttaaatttaat 26609915  T
Q  552 ggaccctatctagggttgcaatttgcgatcaccaatagttttatttgacctttg 605  Q
    |||||||||||| |||||||||||| |||||||| |||||||||||||||||||    
T  26609916 ggaccctatcta-ggttgcaatttgtgatcaccactagttttatttgacctttg 26609968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 4178753 - 4178648
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| |||||||      
T  4178753 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttctcaagtttct 4178655  T
Q  120 ctctctt 126  Q
    |||||||    
T  4178654 ctctctt 4178648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 4253718 - 4253825
Alignment:
Q  20 tttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||| ||||||||||||| ||||| ||||||||||||||| || | |||| |||||||||||||||||||||||||||||||||||||||||     
T  4253718 tttcactcacctaaggtgtttacaaatgttttccaacccaagagaaccctcaccaaataccctcaaccctaaagttacctcctttgatttcccaagtttc 4253817  T
Q  119 cctctctt 126  Q
     |||||||    
T  4253818 tctctctt 4253825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 6570561 - 6570458
Alignment:
Q  32 aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagt 131  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||| ||||| |||||||||||||||||||||||| |||||||||| ||||| |||     
T  6570561 aaggtgtttacaatgtttcccaccccaagagaaccctagtcaaagacactcaatcctaaagttacctcctttgatttctcaagttttcccctctttaagc 6570462  T
Q  132 tctc 135  Q
    ||||    
T  6570461 tctc 6570458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 12098048 - 12098171
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaact-------------ctaatcaaagaccctcaaccctaaagttacctcctttgat 106  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||              ||||||||||||||||||||||||||||||||||||||||    
T  12098048 tttcactcacccaagatgtttacaatgtttcccaacccaagagaacctctcaagaaaaccctaatcaaagaccctcaaccctaaagttacctcctttgat 12098147  T
Q  107 ttcccaagttttcctctcttgaag 130  Q
    |||||||||||| |||||||||||    
T  12098148 ttcccaagtttttctctcttgaag 12098171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 463 - 605
Target Start/End: Original strand, 26622426 - 26622567
Alignment:
Q  463 tgtcatgttccagaagaaagatcattcgaaggtagggaacggtttcccttccaatcatcgcatacaat-tatgagggatttaattagaatggaccctatc 561  Q
    ||||||| |||||||||||| |||||||||||||||||| |||| |||||| ||||||  |||||| | ||||||||| ||||||  |||||||||||||    
T  26622426 tgtcatggtccagaagaaagttcattcgaaggtagggaagggttccccttcaaatcatgacatacattatatgagggacttaatt-taatggaccctatc 26622524  T
Q  562 tagggttgcaatttgcgatcaccaatagttttatttgacctttg 605  Q
    || |||||||||||| |||| ||| |||||||||||||||||||    
T  26622525 ta-ggttgcaatttgtgatcgccactagttttatttgacctttg 26622567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 39731355 - 39731249
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||  |||||||||||||||||||     
T  39731355 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaagctctaatcaaagaccctaaaccctagagttactccctttgatttcccaagtttc 39731257  T
Q  119 cctctctt 126  Q
     |||||||    
T  39731256 tctctctt 39731249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 35853893 - 35853788
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |  |||||||||||| ||||||      
T  35853893 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactcaaatcaaagaccctaaaccctaaagttgctacctttgatttcctaagtttct 35853795  T
Q  120 ctctctt 126  Q
    |||||||    
T  35853794 ctctctt 35853788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 36574704 - 36574814
Alignment:
Q  20 tttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||| ||||||||||||| ||||| ||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||| ||| |||     
T  36574704 tttcactcacctaaggtgtttacaaatgttttccaacccaagagaaccctcatcaaagaccgtcaaccctaaagttacctcctttgatttctcaattttc 36574803  T
Q  119 cctctcttgaa 129  Q
     ||||||||||    
T  36574804 tctctcttgaa 36574814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 48408781 - 48408675
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||| |  |||||||||||||||||||     
T  48408781 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaaactctaatcaaagaccctaaaccctagagttgctccctttgatttcccaagtttc 48408683  T
Q  119 cctctctt 126  Q
     |||||||    
T  48408682 tctctctt 48408675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 28 - 315
Target Start/End: Complemental strand, 9189875 - 9189593
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagacc-ctcaaccctaaagttacctcctttgatttcccaagttttcctctct 125  Q
    ||||||||||||||||||||||||||||||||||||||  || | |||||| | |||||||||||||||| ||||||||   ||| ||||||  ||||||    
T  9189875 acccaaggtgtttacaatgtttcccaacccaagagaaccttactacaaagaacactcaaccctaaagttatctcctttgcaatcc-aagtttctctctct 9189777  T
Q  126 tgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaa-tcgcgccac- 223  Q
      ||  |||||||| |    || ||||        |||||||||| |||||||| ||||| |||| ||||| ||||||||| |  |||| ||| |||||     
T  9189776 aaaacctctctctcaaaaatctgcaaa--------gaaacacttatatagtacacagtgacagacgaaatcgcgccgcgcctgctaaaaatcgtgccacg 9189685  T
Q  224 atttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaatcgcgccacgatttgccttcagcagaaac 315  Q
    |||| |||||||||||||||||||| ||  ||||||||| ||||| || |||||| |||| ||||||||| |||||||||||||||| ||||    
T  9189684 atttaaagcgtacgacccaaggtacaacgtccttatccaaaaatcacgccacgccagtacaaatcgcgccgcgatttgccttcagcaaaaac 9189593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 36146597 - 36146721
Alignment:
Q  20 tttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaac---tc----------taatcaaagaccctcaaccctaaagttacctcctttga 105  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||   ||          |||||||||||||||||| |||||||||||||||||||    
T  36146597 tttcactcacccaaggtgtttacaaatgtttcccaacccaagagaacctctcaagaaaaccataatcaaagaccctcaacactaaagttacctcctttga 36146696  T
Q  106 tttcccaagttttcctctcttgaag 130  Q
    ||||||||||||| |||||||||||    
T  36146697 tttcccaagtttttctctcttgaag 36146721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 41317623 - 41317746
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactc-------------taatcaaagaccctcaaccctaaagttacctcctttgat 106  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |             |||||||||||||||||||||||||||||||||||||||    
T  41317623 tttcactcatccaaggtgtttacaatgtttcccaacccaagagaacccctcaagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgat 41317722  T
Q  107 ttcccaagttttcctctcttgaag 130  Q
    ||||| |||||  |||||||||||    
T  41317723 ttccctagtttctctctcttgaag 41317746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 190 - 338
Target Start/End: Complemental strand, 3258596 - 3258448
Alignment:
Q  190 caaaatcacgccgcgccagagaaaatcgcgccacatttgaa-gcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaa-t 287  Q
    ||||||| |||||||||||  |||||||||||||  || |  | |||||||||||||||| || ||||||||||||||||||||||||  || || || |    
T  3258596 caaaatcgcgccgcgccagctaaaatcgcgccacggttcattgtgtacgacccaaggtacaacgaccttatccacaaatcgcgtcacgg-tgcacaaaat 3258498  T
Q  288 cgcgccacgatttgccttcagcagaaaccatccattctaccaccaaaatcg 338  Q
    ||||||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  3258497 cgcgccacgatttgc-ttcagcagaaaccatccattctgccagcaaaatcg 3258448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 28 - 310
Target Start/End: Complemental strand, 23402881 - 23402605
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    ||||||||||||||||||||||||||||||||||||||   | | ||||||| |||||||||||||||||||||||||   ||| ||||||  ||||||     
T  23402881 acccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctctc 23402783  T
Q  127 gaagttctctctccacttccttcaaaaatgagct--gaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcgccaca 224  Q
     ||       |||    ||||||||||||  ||   |||||||||| |||||||| ||||| |||| ||||| ||||||||| |  | |||||||||||     
T  23402782 aaaac-----ctc----tccttcaaaaatttgcaaagaaacacttatatagtacacagtgacagacgaaatcgcgccgcgcctgtcagaatcgcgccacg 23402692  T
Q  225 tttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagca 310  Q
     |  || ||||||||||||||||| |||||||||||||||||| ||| |||||| ||||  ||| | ||| ||||||||||||||||    
T  23402691 atataaacgtacgacccaaggtacaacaaccttatccacaaattgcgccacgccagtactaaattgtgccgcgatttgccttcagca 23402605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 21 - 130
Target Start/End: Original strand, 23565251 - 23565359
Alignment:
Q  21 ttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||| ||||| | || |||||||||| ||||||||||||||| |||| ||||||||||||||||||| ||||||||||      
T  23565251 ttcactcacccaaggtgtttacaaatgttttctaaaccaagagaac-ctaatcaaagacccttaacc-taaagttacctcctttgatatcccaagtttct 23565348  T
Q  120 ctctcttgaag 130  Q
    |||||||||||    
T  23565349 ctctcttgaag 23565359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 23343954 - 23343859
Alignment:
Q  20 tttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaag 114  Q
    |||||||||||||||||||||  || ||||||| |||| |||||||| |||||||||||| ||| ||||||||||||| |||||||||||||||||    
T  23343954 tttcactcacccaaggtgttttgaaatgtttccaaacctaagagaaccctaatcaaagactctcgaccctaaagttacatcctttgatttcccaag 23343859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 211 - 329
Target Start/End: Complemental strand, 9184866 - 9184746
Alignment:
Q  211 aaaatcgcgccac-atttgaagcgtacgacccaaggtacgacaac--cttatccacaaatcgcgtcacgcctgtaccaatcgcgccacgatttgccttca 307  Q
    ||||||| ||||| |||| |||||||||||||||||| | ||  |  ||||||||||||||||| |||||| |||| |||||||||||||||||||||||    
T  9184866 aaaatcgtgccacgatttaaagcgtacgacccaaggttcaacgtctccttatccacaaatcgcgccacgccagtacaaatcgcgccacgatttgccttca 9184767  T
Q  308 gcagaaaccatccattctacca 329  Q
    ||| ||| ||||||||||||||    
T  9184766 gca-aaaacatccattctacca 9184746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 9185042 - 9184965
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||||  || | ||||||  |||||||||||||||||||||||||    
T  9185042 acccaaggtgtttacaatgtttcccaacccaagagaaccttactacaaagatactcaaccctaaagttacctcctttg 9184965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 2580619 - 2580695
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||| |||||||||||||||   |  ||||||| |||||||||||||||||||||||||    
T  2580619 acccaaggtgtttacaatgttttccaacccaagagaacctcacacaaagacactcaaccctaaagttacctcctttg 2580695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 20284318 - 20284394
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctccttt 103  Q
    ||||||||||||||||||||||||||||||||||||| |||    ||||||| ||||||||||||||||||||||||    
T  20284318 acccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaagttacctccttt 20284394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 8153321 - 8153198
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactc-------------taatcaaagaccctcaaccctaaagttacctcctttgat 106  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |             ||||||||||||| ||||| |||||||||||||||||||    
T  8153321 tttcactcacccaatgtgtttacaatgtttcccaacccaagagaacccctcaagaggaccctaatcaaagacccccaaccttaaagttacctcctttgat 8153222  T
Q  107 ttcccaagttttcctctcttgaag 130  Q
    || || |||||  |||||||||||    
T  8153221 tttcctagtttctctctcttgaag 8153198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 126
Target Start/End: Original strand, 43504347 - 43504443
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    |||||||||| | ||||||||||| ||||||||| |||||||||||||| || ||||||| |||| |  |||||||||||||||||||  |||||||    
T  43504347 caaggtgtttcccatgtttcccaagccaagagaagctctaatcaaagactctaaaccctagagtttctccctttgatttcccaagtttctctctctt 43504443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 27347796 - 27347745
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaat 71  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  27347796 tttcactcacccaatgtgtttacaatgtttcccaacctaagagaactctaat 27347745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 25767147 - 25767249
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||| |||||||||||||||||||||||    |||||| ||||||||||||||||| ||||||| |||| |  ||||||||||| |||||||     
T  25767147 tttcactcacc-aaggtgtttacaatgtttcccaa----agagaaactctaatcaaagaccctaaaccctagagttgctccctttgatttctcaagtttc 25767241  T
Q  119 cctctctt 126  Q
     |||||||    
T  25767242 tctctctt 25767249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 44847991 - 44847917
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctccttt 103  Q
    ||||||||||||||||||||||||||||||||||  |||    ||||||| ||||||||||||||||||||||||    
T  44847991 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctccttt 44847917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 21989137 - 21989214
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||| ||||| |||||||||||||||||||    
T  21989137 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaacctaaagttacctcctttg 21989214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 33332318 - 33332241
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||| ||||||||||||||| ||||||||||||||  || | |||| || |||||||||||||||||||||||||    
T  33332318 acccaagatgtttacaatgtttctcaacccaagagaaccttactacaaaaacactcaaccctaaagttacctcctttg 33332241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 46516173 - 46516096
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||| |||||||  |||    ||||||| |||||||||||||||||||||||||    
T  46516173 acccaaggtgtttacaatgtttcccaactcaagagatcctcactacaaagacactcaaccctaaagttacctcctttg 46516096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 161 - 271
Target Start/End: Original strand, 2580742 - 2580854
Alignment:
Q  161 gaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaa-tcgcgccac-atttgaagcgtacgacccaaggtacgacaacctta 258  Q
    ||||||||||||||||||| ||||| |||| ||||| ||||||||  |  |||| ||| ||||| |||| || |||||||| |||||||| || ||||||    
T  2580742 gaaacacttaaatagtacacagtgacagacgaaatcgcgccgcgcttgctaaaaatcgtgccacgattttaaccgtacgacacaaggtacaacgacctta 2580841  T
Q  259 tccacaaatcgcg 271  Q
    |||||||||||||    
T  2580842 tccacaaatcgcg 2580854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 410 - 452
Target Start/End: Original strand, 26609755 - 26609797
Alignment:
Q  410 atatctatatattcattttttatatcagaagaaaaactgtaca 452  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  26609755 atatctatatattcattttttatatcaaaagaaaaactgtaca 26609797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 2479565 - 2479642
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||     |||||| ||||||||||||||| |||||||||    
T  2479565 acccaaggtgtttacaatgtttcccaacccaagagatcctcactataaagacactcaaccctaaagttccctcctttg 2479642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 117
Target Start/End: Complemental strand, 5817137 - 5817048
Alignment:
Q  29 cccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||| ||||||||||||||||||| || |||||   | | ||||||| ||||||| |||||||||||||||||  |||||||||||    
T  5817137 cccaaggtatttacaatgtttcccaaccaaatagaacctcactacaaagacactcaaccataaagttacctcctttgtattcccaagttt 5817048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 29160034 - 29160126
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacc--caagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||||||||||||||||||  |||||||| |||     |||||| |||||||| ||||||||||||||||  |||||||||||    
T  29160034 acccaaggtgtttacaatgtttcccaaccctcaagagaacctcactataaagacactcaacccaaaagttacctcctttgtattcccaagttt 29160126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 28 - 126
Target Start/End: Original strand, 3047483 - 3047582
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    ||||||| || ||| | |||||||||||||||||||||   | | ||||||| |||||||||||||||||||||||||   ||||||||||  |||||||    
T  3047483 acccaagatgattatagtgtttcccaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtaatcccaagtttctctctctt 3047582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 9235448 - 9235414
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagagaa 64  Q
    |||||||||||||||||||||||||||||||||||    
T  9235448 ccaaggtgtttacaatgtttcccaacccaagagaa 9235414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 26639200 - 26639150
Alignment:
Q  80 ctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaag 130  Q
    |||||||||||||||| |||||||||||||| ||||||  |||||||||||    
T  26639200 ctcaaccctaaagttatctcctttgatttcctaagtttcactctcttgaag 26639150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 4796536 - 4796460
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||| |||||||||||||  |||    ||||||| ||||| |||||||||||||||||||    
T  4796536 acccaaggtgtttacaatgttttccaacccaagagatcctcactacaaagacactcaa-cctaaagttacctcctttg 4796460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 161 - 325
Target Start/End: Original strand, 20284442 - 20284605
Alignment:
Q  161 gaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcgccacatttgaagcgtacgacccaaggtacgacaaccttatc 260  Q
    |||||||||| |||||||| ||||  |||| ||||| |||||| || |  | |||||||||||  |  || ||||||||||||| ||  ||   ||||||    
T  20284442 gaaacacttatatagtacacagtgtcagacgaaatcgcgccgcacctgccagaatcgcgccacggtataaacgtacgacccaag-tataacggtcttatc 20284540  T
Q  261 cacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaaccatccattct 325  Q
    ||||||||||| |||||| ||||  ||||| ||| |||||||||||||||| ||| ||||||||||    
T  20284541 cacaaatcgcgccacgccagtactaaatcgtgccgcgatttgccttcagca-aaaacatccattct 20284605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 40808570 - 40808482
Alignment:
Q  19 atttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatt 107  Q
    |||||||| |||||||||||| |||| || ||||||||| || | | || | | ||||||| ||||||||||||||||||||||||||||    
T  40808570 atttcactaacccaaggtgttcacaaatggttcccaacctaata-acctttcaccaaagacactcaaccctaaagttacctcctttgatt 40808482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 49091918 - 49091995
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||| |||||||||||||||||||| |  |||    ||||||| ||||||| |||||||||||||||||    
T  49091918 acccaaggtgttttcaatgtttcccaacccaagatatcctcagtacaaagacactcaaccttaaagttacctcctttg 49091995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 21640039 - 21640118
Alignment:
Q  28 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| |||||||||    
T  21640039 acccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccctcctttg 21640118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 21646237 - 21646316
Alignment:
Q  28 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| |||||||||    
T  21646237 acccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagtttcctcctttg 21646316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 30843472 - 30843524
Alignment:
Q  57 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttc 109  Q
    ||||||||| || ||||||||| || || ||||||||||||||||||||||||    
T  30843472 caagagaacccttatcaaagactctaaatcctaaagttacctcctttgatttc 30843524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 24789817 - 24789732
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagt 115  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  |||||||||||||||||    
T  24789817 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagt 24789732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 5514198 - 5514243
Alignment:
Q  20 tttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaa 64  Q
    ||||||||| | ||||||||||||| ||||||||||||||||||||    
T  5514198 tttcactcatcgaaggtgtttacaagtgtttcccaacccaagagaa 5514243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 20357410 - 20357347
Alignment:
Q  28 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccct 88  Q
    |||||||||| ||||||||  ||||||||||||||||| ||||| | ||||||| |||||||||    
T  20357410 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccct 20357347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 60
Target Start/End: Original strand, 35961050 - 35961078
Alignment:
Q  32 aaggtgtttacaatgtttcccaacccaag 60  Q
    |||||||||||||||||||||||||||||    
T  35961050 aaggtgtttacaatgtttcccaacccaag 35961078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 49091892 - 49091924
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaag 60  Q
    ||||||||||||| |||||||||||||||||||    
T  49091892 acccaaggtgttttcaatgtttcccaacccaag 49091924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 218; Significance: 1e-119; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 20 - 323
Target Start/End: Complemental strand, 31182952 - 31182648
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31182952 tttcactcacctaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 31182853  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagac-aaaatcacgccgcgccagagaaaatcgc 218  Q
    ||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||| ||||| |||| |||||| ||| ||||| | |||||||||    
T  31182852 ctctcttgaagttctctctcctcttccttaaaaaatgagatgaaacacttaaatagtacacagtgacagacaaaaatcgcgctgcgcctgtgaaaatcgc 31182753  T
Q  219 gccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaacca 317  Q
    |||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||  ||||||||||||||||| |||||||| ||||||    
T  31182752 gccacggttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcactcctgcacaaaatcgcgccacgatttg-cttcagcaaaaacca 31182654  T
Q  318 tccatt 323  Q
    ||||||    
T  31182653 tccatt 31182648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 20 - 376
Target Start/End: Original strand, 5887605 - 5887961
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5887605 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaataccctcaaccctaaagttacctcctttgatttcccaagttttc 5887704  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcg 219  Q
    ||||||||||||||||||| | |  |||||||||||||||| |||||||||||||||||| |||||  ||||||||| | ||||||||   |||| || |    
T  5887705 ctctcttgaagttctctcttctcacccttcaaaaatgagctaaaacacttaaatagtacacagtgactgacaaaatcgcaccgcgccacccaaaaccgtg 5887804  T
Q  220 ccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaatcgcgccacgatttgccttcagcagaaaccatc 319  Q
     |||  |||| | |||||||||||| ||||||||||||||||| |||||||||||| |||| || |||||| ||||||||| |||||||||||||||||     
T  5887805 tcacgattgatgagtacgacccaagttacgacaaccttatccataaatcgcgtcacacctgcacaaatcgcaccacgattttccttcagcagaaaccata 5887904  T
Q  320 cattctaccaccaaaatcgtgacgcgccactcaaaatcgtgtcacaattatgagttt 376  Q
    | |||| ||| ||||||||||   ||||| ||| ||||||||||| |||||||||||    
T  5887905 cgttctgccaacaaaatcgtgctacgccattcataatcgtgtcacgattatgagttt 5887961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 20 - 300
Target Start/End: Original strand, 8566135 - 8566407
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaa-ccctaaagttacctcctttgatttcccaagtttt 118  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  8566135 tttcactcacccaaggtgtttacaatgtttccgaacccaagagaactctaatcaaagaccctcatgccctaaagttacctcatttgatttcccaagtttt 8566234  T
Q  119 cctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgc 218  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||| ||           
T  8566235 cctctcttgaagttctctctcctctatcttcaaaaatgagctgaaacacttaaatagtacacagtgacagacaaaatcgcgccgcgccagtga------- 8566327  T
Q  219 gccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgattt 300  Q
       ||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||  ||||||||||||||||    
T  8566328 ---acggttgaagcgtacgacccaaggtacgacaaccttatccacaaattgcgtcacgcctgcacaaaatcgcgccacgattt 8566407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 20 - 265
Target Start/End: Complemental strand, 33831659 - 33831413
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  33831659 tttcactcacccaaggtgtttacaatgttttccaacccaagagaactctaatcaaagacccttaaccctaaaattaactcctttgatttcccaagttttc 33831560  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagac-aaaatcacgccgcgccagagaaaatcgc 218  Q
    |||| |||||||||||||||| ||||||| |||||||||||||||| ||||||||||||| ||||| |||| |||||| ||||| ||| || ||||| ||    
T  33831559 ctcttttgaagttctctctcctcttccttaaaaaatgagctgaaacgcttaaatagtacacagtgacagacaaaaatcgcgccgtgcctgaaaaaattgc 33831460  T
Q  219 gccacatttgaagcgtacgacccaaggtacgacaaccttatccacaa 265  Q
    |||||  ||||| |||||||  ||||||||||||| |||||||||||    
T  33831459 gccacggttgaaacgtacgatacaaggtacgacaatcttatccacaa 33831413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 30 - 358
Target Start/End: Complemental strand, 16452050 - 16451730
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaa 129  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16452050 ccaaggtgtttacaatgtttccgaacccaagagaactctaatcaaagatcctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaa 16451951  T
Q  130 gttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagag-aaaatcgcgccacatttg 228  Q
    | |||   |||       |||||||||| ||||||  |||| |||| ||| ||||| | ||||||||  | |||||| | | |||||||  ||||  ||     
T  16451950 gctct---tcc-------tcaaaaatgaactgaaatgcttatatagaacacagtgacaaacaaaatcgtgtcgcgcctgtgaaaaatcgtaccacgattt 16451861  T
Q  229 aagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaaccatccattctac 327  Q
    ||||||| ||||||| |||| ||| ||||||||| ||||||||||||||||||||  |||||||||||||| |  ||||||||||||||||||||||| |    
T  16451860 aagcgtatgacccaatgtacaacagccttatccagaaatcgcgtcacgcctgtacaaaatcgcgccacgatatttcttcagcagaaaccatccattctgc 16451761  T
Q  328 caccaaaatcgtgacgcgccactcaaaatcg 358  Q
    ||  ||||||| ||| |||| | ||||||||    
T  16451760 caagaaaatcgcgacacgcctcccaaaatcg 16451730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 28750844 - 28750960
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  28750844 tttcactcacccaaggtgttttcaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 28750943  T
Q  120 ctctcttgaagttctct 136  Q
    ||||||| ||| |||||    
T  28750944 ctctcttcaagctctct 28750960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 13488182 - 13488076
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  13488182 tttcactcacccaaggtgtttacaatgttttccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 13488083  T
Q  120 ctctctt 126  Q
    |||||||    
T  13488082 ctctctt 13488076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 39468738 - 39468853
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||      
T  39468738 tttcactcactcaaggtgtttacaatgtttcccaacccaagagaactctaatgaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 39468837  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  39468838 ctctcttcaagctctc 39468853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 42926872 - 42926757
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||     
T  42926872 tttcactcacccaaggtgtttacaatgtttcccaatccaagagaactctaatcaaagaccatcaatcctaaagttacctcatttgatttcccaagttttt 42926773  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||||||| ||||    
T  42926772 ctctcttgaagctctc 42926757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 533748 - 533642
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||      
T  533748 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagacccccaaccctaaagttacctcctttgatttcccaaatttct 533649  T
Q  120 ctctctt 126  Q
    |||||||    
T  533648 ctctctt 533642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 3075847 - 3075956
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  3075847 tttcactcatcaaaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttccaaagtttta 3075946  T
Q  120 ctctcttgaa 129  Q
    ||||||||||    
T  3075947 ctctcttgaa 3075956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 42426424 - 42426521
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42426424 tttcactcacccaaggtgtttacaatgtttcccaatctaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 42426521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 42428619 - 42428734
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||      
T  42428619 tttcactcacccaaggtgtttacaatatttcccaacccaagagaactctaatcaaagaccttcaaccctaaagttatctcctttgatttcccaagtttct 42428718  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  42428719 ctctcttcaagctctc 42428734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 538004 - 537907
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  538004 tttcactcacccaaggtgtttacgatgtttcccaagccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgattttccaagttt 537907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 32636803 - 32636706
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  32636803 tttcactcacccaaggtgtttacaatgtttcactacccaagagaactctaatcaaagacccttaaccctaaagttacctcctttgatttctcaagttt 32636706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 25412740 - 25412626
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||      
T  25412740 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaatgttgcctcctttgatttcccaagtttct 25412642  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  25412641 ctctcttcaagctctc 25412626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 30683110 - 30683224
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||      
T  30683110 tttcactcacc-aaggtgtttacaatgtttcgcaacccaagagaactctaatcaaagaccctcaaccctaaaattacctcctctgatttcccaagtttct 30683208  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  30683209 ctctcttcaagctctc 30683224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 36074234 - 36074348
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||      
T  36074234 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttct 36074332  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  36074333 ctctcttcaagctctc 36074348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 13239730 - 13239625
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||      
T  13239730 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacctcctttgattttctaagtttct 13239632  T
Q  120 ctctctt 126  Q
    |||||||    
T  13239631 ctctctt 13239625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 13343039 - 13342925
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| | ||||||||||||||||||||      
T  13343039 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcagagaccctaaaccctaaagttgcttcctttgatttcccaagtttct 13342941  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  13342940 ctctcttcaagctctc 13342925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 19806364 - 19806289
Alignment:
Q  19 atttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagtt 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19806364 atttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctcaagtt 19806289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 30182567 - 30182453
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||| | ||||||||||||||||||||      
T  30182567 tttcactcacc-aaggtgtttgcaatgtttcccaacccaagagaactctaatcaaagaccctaatccctaaagttgcttcctttgatttcccaagtttct 30182469  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  30182468 ctctcttcaagctctc 30182453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 42310124 - 42310221
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    ||||||| ||||||  |||||||||||||| |||||| |||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  42310124 tttcacttacccaaaatgtttacaatgttttccaaccaaagagaaccctaatcaaagaccataaaccctaaagttacctcctttgatttcccaagttt 42310221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 16409461 - 16409355
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  |||||||||||||||||||     
T  16409461 tttcactcacc-aaggtgtttaccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttc 16409363  T
Q  119 cctctctt 126  Q
     |||||||    
T  16409362 tctctctt 16409355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 66 - 129
Target Start/End: Original strand, 16649857 - 16649920
Alignment:
Q  66 tctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaa 129  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16649857 tctaatcaaagaccatcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaa 16649920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 28 - 325
Target Start/End: Complemental strand, 24553395 - 24553106
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    ||||||||||||||||||||||||||||||||||||||   | | ||||||| ||||||||| |||||||||||||||   ||| ||||||   |||||     
T  24553395 acccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaacccttaagttacctcctttgtaatcc-aagtttctttctcta 24553297  T
Q  127 gaagttctctctccacttccttcaaaaatgagct--gaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcgccaca 224  Q
     ||||||||          ||||||||||  ||   |||||||||| |||||||| ||||| |||| ||||| ||||||||| |  | |||||||||||     
T  24553296 aaagttctc----------cttcaaaaatctgcaaagaaacacttatatagtacacagtgacagacgaaatcgcgccgcgcctgtcagaatcgcgccacg 24553207  T
Q  225 tttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaaccatccatt 323  Q
     |  || ||||||||||||||||| ||  |||||||||||||||||| |||||  ||||  ||||  |||||||||||||||||||| ||| ||||||||    
T  24553206 gtataaacgtacgacccaaggtacaacggccttatccacaaatcgcgccacgctagtactaaatcatgccacgatttgccttcagca-aaaacatccatt 24553108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 26177869 - 26177763
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  |||||||||||||||||||     
T  26177869 tttcactcacc-aaggtgtttaccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttc 26177771  T
Q  119 cctctctt 126  Q
     |||||||    
T  26177770 tctctctt 26177763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 9789406 - 9789512
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||| ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  |||||||||||||||||||     
T  9789406 tttcactcacc-aaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttc 9789504  T
Q  119 cctctctt 126  Q
     |||||||    
T  9789505 tctctctt 9789512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 18441830 - 18441936
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||| ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  |||||||||||||||||||     
T  18441830 tttcactcacc-aaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttc 18441928  T
Q  119 cctctctt 126  Q
     |||||||    
T  18441929 tctctctt 18441936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 26170760 - 26170654
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||| || ||||||||||| || ||||||| ||||||  |||||||||||||||||||     
T  26170760 tttcactcacc-aaggtgtttaccatgtttcccaacccaagagaagctgtaatcaaagactctaaaccctagagttactccctttgatttcccaagtttc 26170662  T
Q  119 cctctctt 126  Q
     |||||||    
T  26170661 tctctctt 26170654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 161 - 329
Target Start/End: Original strand, 28832596 - 28832764
Alignment:
Q  161 gaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcgccac-atttgaagcgtacgacccaaggtacgacaaccttat 259  Q
    ||||||||||||||||||| ||||||||||||| || || |||||| |  | ||||| ||||| |||| || ||||||||||||||||| || |||||||    
T  28832596 gaaacacttaaatagtacacagtgatagacaaa-tcgcgtcgcgcctgccagaatcgtgccacgattttaaacgtacgacccaaggtacaacgaccttat 28832694  T
Q  260 ccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaaccatccattctacca 329  Q
    |||||||||||| ||| ||  |||  ||||||||| |||||| ||||||||| ||| ||||||||| ||||    
T  28832695 ccacaaatcgcgccacaccaatactaaatcgcgccgcgattttccttcagca-aaaacatccattccacca 28832764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 11181708 - 11181623
Alignment:
Q  19 atttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||    ||||||| ||||||| |||||||||||||||||    
T  11181708 atttcact-acccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaaccataaagttacctcctttg 11181623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 161 - 325
Target Start/End: Complemental strand, 17003703 - 17003538
Alignment:
Q  161 gaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcgccac-atttgaagcgtacgacccaaggtacgacaaccttat 259  Q
    |||||||||| |||||||| ||||| |||| ||||| ||||||||| |  | ||||||||||| |||| || ||||||| | ||| ||| ||  ||||||    
T  17003703 gaaacacttatatagtacacagtgaaagacgaaatcgcgccgcgcctgtcagaatcgcgccacaattttaatcgtacgatctaagatacaacggccttat 17003604  T
Q  260 ccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaaccatccattct 325  Q
    |||||||||| |||||||| ||||  ||||| ||| ||||||| |||||||| ||| ||||||||||    
T  17003603 ccacaaatcgtgtcacgccagtactaaatcgagccgcgatttgtcttcagca-aaaacatccattct 17003538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 28832486 - 28832563
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||| |||    ||||||| |||||| ||||||||||||||||||    
T  28832486 acccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaactctaaagttacctcctttg 28832563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 14520461 - 14520536
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||  |||    ||||||| |||||||||||||||||||||||||    
T  14520461 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttg 14520536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 9353200 - 9353123
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||| || ||||||||||||||||||||||    
T  9353200 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacacttaaccctaaagttacctcctttg 9353123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 11916840 - 11916763
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||  |||||||||||||||||||||||||    
T  11916840 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagaaactcaaccctaaagttacctcctttg 11916763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 325
Target Start/End: Complemental strand, 31300339 - 31300175
Alignment:
Q  161 gaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcgccacatttgaagcgtacgacccaaggtacgacaaccttatc 260  Q
    ||||| |||| |||||||| ||||| |||| ||||  ||||||||| |  |||||||  ||||  || || ||||||||||||| ||| ||  |||||||    
T  31300339 gaaacccttatatagtacacagtgacagacgaaatggcgccgcgcctgttaaaatcgtaccacgatttaaacgtacgacccaagatacaacgtccttatc 31300240  T
Q  261 cacaaatcgcgtcacgcctgtacc-aatcgcgccacgatttgccttcagcagaaaccatccattct 325  Q
    ||| ||||||| |||||| ||||| ||||||||  | |||||||||||||| ||| ||||||||||    
T  31300239 caccaatcgcgccacgccagtaccaaatcgcgctgcaatttgccttcagca-aaaacatccattct 31300175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 31300463 - 31300386
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||| ||||||||||||| |||    ||||||| ||||||| |||||||||||||||||    
T  31300463 acccaaggtgtttacaatgtttctcaacccaagagaacctcactacaaagacactcaaccttaaagttacctcctttg 31300386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 5007530 - 5007424
Alignment:
Q  20 tttcactcacccaaggtgtttacaa---tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtt 116  Q
    ||||||||||| |||||||||||||   ||||||  ||| ||||||||| || | ||||||  ||||||||||||||||||||||||||||| | |||||    
T  5007530 tttcactcacctaaggtgtttacaaatatgtttc--aactcaagagaac-ctcaccaaagatactcaaccctaaagttacctcctttgattttctaagtt 5007434  T
Q  117 ttcctctctt 126  Q
    || |||||||    
T  5007433 tttctctctt 5007424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 3325893 - 3325786
Alignment:
Q  20 tttcactcacccaaggtgtttac-aatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||||||||||||||| |||||||| |||| ||||||||| || | ||||||| ||| |||||||| ||||    ||||||||||||| |||     
T  3325893 tttcactcacccaaggtgtttacaaatgtttctcaactcaagagaacactcaccaaagacactcgaccctaaaattactctttttgatttcccaattttc 3325794  T
Q  119 cctctctt 126  Q
     |||||||    
T  3325793 tctctctt 3325786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 9049591 - 9049654
Alignment:
Q  67 ctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaag 130  Q
    ||||||||||||  ||||||||||||||| ||||||||||||| |||||||  |||||||||||    
T  9049591 ctaatcaaagactttcaaccctaaagttatctcctttgatttctcaagtttctctctcttgaag 9049654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 10281981 - 10282073
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    ||||||||||||||||||||||| ||||||  ||||||||   | | ||||||| |||||||||||||||||||||||||  ||| |||||||    
T  10281981 acccaaggtgtttacaatgtttcacaaccctcaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtattctcaagttt 10282073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 17003827 - 17003750
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||| |||||||||||| |||    |||||||  ||||||||||||||| ||||||||    
T  17003827 acccaaggtgtttacaatgtttccaaacccaagagaacctcactacaaagacattcaaccctaaagttatctcctttg 17003750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 36932216 - 36932139
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||||||||||| | ||     |||||| ||||||||||||||| |||||||||    
T  36932216 acccaaggtgtttacaatgtttcccaacccaagagatcatcactataaagacactcaaccctaaagttccctcctttg 36932139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 19588975 - 19589051
Alignment:
Q  29 cccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||| ||||||||||||||||||||||||||||  |||    ||||||| |||||||||||| ||||||||||||    
T  19588975 cccaagatgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaaattacctcctttg 19589051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 37439072 - 37439012
Alignment:
Q  75 agaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctc 135  Q
    ||||||||||||||||||||||||| |||||||| ||||||||  ||||||| ||| ||||    
T  37439072 agaccctcaaccctaaagttacctcatttgattttccaagtttctctctcttcaagctctc 37439012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 358
Target Start/End: Original strand, 27638225 - 27638349
Alignment:
Q  233 gtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaa-tcgcgccacgatttgccttcagcagaaaccatccattctaccacc 331  Q
    |||||||||||||||| |  |||||||| | |||||| ||||||| || || || ||||||||| |||||| |||  ||||||||||||||||| ||| |    
T  27638225 gtacgacccaaggtacaatgaccttatctagaaatcgtgtcacgc-tgcacaaaatcgcgccacaatttgc-ttcgacagaaaccatccattctgccagc 27638322  T
Q  332 aaaatcgtgacgcgccactcaaaatcg 358  Q
    ||||||||| | |||| || |||||||    
T  27638323 aaaatcgtgccacgcctctgaaaatcg 27638349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 15464763 - 15464840
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||| ||||||||||||||||||||  |||    ||||||| ||||||||||||||| ||| |||||    
T  15464763 acccaaggtgtttacgatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagtttccttctttg 15464840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 29720340 - 29720244
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  |||||||||||||||||||  |||||||    
T  29720340 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtttctctctctt 29720244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 42127238 - 42127161
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||| ||||||||||| ||||||||||||| |||    ||||||  ||||||| |||||||||||||||||    
T  42127238 acccaaggtgtatacaatgtttctcaacccaagagaacctcactacaaagatactcaaccttaaagttacctcctttg 42127161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 29722500 - 29722413
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  |||||||||||||||||||    
T  29722500 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagttt 29722413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 37439112 - 37439070
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagaga 63  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  37439112 tttcactcaccaaag-tgtttacaatgtttcccaacccaagaga 37439070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 29751352 - 29751437
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagt 115  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  |||||||||||||||||    
T  29751352 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagt 29751437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 265
Target Start/End: Complemental strand, 42127113 - 42127008
Alignment:
Q  161 gaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcgccac-atttgaagcgtacgacccaaggtacgacaaccttat 259  Q
    |||||||||  |||||||| ||||| |||| ||||| |||||||||    | ||||||||||  |||| || ||||||||||||||||| ||  ||||||    
T  42127113 gaaacacttgtatagtacacagtgacagacgaaatcgcgccgcgcctatcagaatcgcgccatgatttcaaacgtacgacccaaggtacaacggccttat 42127014  T
Q  260 ccacaa 265  Q
    ||||||    
T  42127013 ccacaa 42127008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 31180447 - 31180510
Alignment:
Q  28 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccct 88  Q
    |||||||||| ||||||||  ||||||||||||||||| ||||| | ||||||| |||||||||    
T  31180447 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccct 31180510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 213; Significance: 1e-116; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 20 - 338
Target Start/End: Original strand, 8550976 - 8551295
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  8550976 tttcactcacccaatgtgtttacaatgtttcttaacccaagagaactctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttc 8551075  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagac-aaaatcacgccgcgccagagaaaatcgc 218  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||| |||||| || ||||||   |||||||||    
T  8551076 ctctcttgaagttctctctcctcttccttcaaaaatgagctgaaacacttaaatagtacacagtgacagacaaaaatcgcgtcgcgcctaggaaaatcgc 8551175  T
Q  219 gccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaacca 317  Q
    |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||| ||||||||||| |||||||||||||||    
T  8551176 gccacggttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacggctgcacaaaatcgtgccacgatttg-cttcagcagaaacca 8551274  T
Q  318 tccattctaccaccaaaatcg 338  Q
    |||||||| ||| ||||||||    
T  8551275 tccattctgccagcaaaatcg 8551295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 24 - 338
Target Start/End: Original strand, 40122391 - 40122704
Alignment:
Q  24 actcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctct 123  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||| || || |||||||| ||||||||||||||||||||||||||||||| ||||    
T  40122391 actcacccaaggtgtttacaatgtttcccaatccaagataactctaattaatgatcctcaaccataaagttacctcctttgatttcccaagtttttctct 40122490  T
Q  124 cttgaagttctctctccacttccttcaaaa-atgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcgcca 222  Q
    ||||||   |||||||| ||   || |||| |||||||| ||||||||||||||||| ||||| |||||||||| || ||||| || |||||||||||||    
T  40122491 cttgaac--ctctctcctctcatttaaaaaaatgagctggaacacttaaatagtacacagtgacagacaaaatcgcgtcgcgctagtgaaaatcgcgcca 40122588  T
Q  223 catttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaatcgcgccacgatttgccttcagcagaaaccatccat 322  Q
    |  |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  40122589 cggttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgtgtcacgcctgcaccaatcgtgccacgatttgccttcagcagaaaccatccat 40122688  T
Q  323 tctaccaccaaaatcg 338  Q
    ||| ||||||||||||    
T  40122689 tctgccaccaaaatcg 40122704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 20 - 338
Target Start/End: Original strand, 834356 - 834659
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  834356 tttcacgcacccaaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttt 834455  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcg 219  Q
     ||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||               ||||    
T  834456 atcttttgaagttctctctcatcttccttcaaaaatgagctgaaacacttaaatagtacacagtgacagacaaaatcgcgc---------------cgcg 834540  T
Q  220 ccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaaccat 318  Q
    ||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||  ||||||||||||||||| ||| ||||||||||||    
T  834541 ccacggttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgtgtcacgcctgcacagaatcgcgccacgatttg-ctttagcagaaaccat 834639  T
Q  319 ccattctaccaccaaaatcg 338  Q
    ||||||| ||| ||||||||    
T  834640 ccattctgccagcaaaatcg 834659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 3847310 - 3847447
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3847310 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcgaccctaaagttacctcctttgatttcccaagttttc 3847409  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatga 157  Q
    ||||||||||||||||||||| | | ||||||||||||    
T  3847410 ctctcttgaagttctctctcctccttcttcaaaaatga 3847447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 20 - 315
Target Start/End: Original strand, 197097 - 197384
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  197097 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgattttccaagttttc 197196  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcg 219  Q
    |||||||||||||||| ||| |    || ||||        ||||||||||||||||||| ||||| |||| ||||| ||||||| | |    ||||| |    
T  197197 ctctcttgaagttctcactcaaaaatctgcaaa--------gaaacacttaaatagtacacagtgacagac-aaatctcgccgcgtctgtccgaatcgtg 197287  T
Q  220 ccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaac 315  Q
    ||| | ||  | ||||||||||||||||| ||  |||||||||||||||||| |||||| ||||  ||| ||||| ||||||||||| |||| ||||    
T  197288 ccataattttaacgtacgacccaaggtacaacgtccttatccacaaatcgcgccacgccagtactaaattgcgccgcgatttgcctttagcaaaaac 197384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 15820286 - 15820167
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  15820286 tttcactcacccaaggtgtttacaatgtttcccaactcaagagaactctaatcaaagaccctcaaccctaaagttacctcttttgatttcccaagttttt 15820187  T
Q  120 ctctcttgaagttctctctc 139  Q
    |||||||||||  |||||||    
T  15820186 ctctcttgaagccctctctc 15820167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 31659217 - 31659098
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  31659217 tttcactcacccaaggtgtttacaatgtttccgaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 31659118  T
Q  120 ctctcttgaagttctctctc 139  Q
    ||||||| ||| ||||||||    
T  31659117 ctctcttcaagctctctctc 31659098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 13138163 - 13138273
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  13138163 tttcactcacccaaggtgtttacaatgtttcccaccccaagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttt 13138262  T
Q  120 ctctcttgaag 130  Q
    |||||||||||    
T  13138263 ctctcttgaag 13138273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 23555454 - 23555573
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||     
T  23555454 tttcattcacccaaggtgtttacaatgtttcccaacccaagagaactttaatcaaagatcctcaaccctgaagttacctcctttgatttcccaagttttt 23555553  T
Q  120 ctctcttgaagttctctctc 139  Q
    ||||||||||| ||||||||    
T  23555554 ctctcttgaagctctctctc 23555573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 10925202 - 10925087
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||      
T  10925202 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactataatcaaagaccctcaaccctaaagttacctcctttgattttccaagtttct 10925103  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  10925102 ctctcttcaagctctc 10925087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 28220415 - 28220521
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  28220415 tttcactcacccaaggtgttttcaatgcttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 28220514  T
Q  120 ctctctt 126  Q
    |||||||    
T  28220515 ctctctt 28220521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 28223610 - 28223716
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  28223610 tttcactcacccaaggtgtcttcaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 28223709  T
Q  120 ctctctt 126  Q
    |||||||    
T  28223710 ctctctt 28223716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 211 - 368
Target Start/End: Complemental strand, 37167875 - 37167723
Alignment:
Q  211 aaaatcgcgccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaatcgcgccacgatttgccttcagca 310  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||     || |||| |||||||||||||||||||||||||||||    
T  37167875 aaaatcgcgccacagttgaagcgtacgacccaaggtacgacaaccttatccacaaatc-----acacctgcaccaatcgcgccacgatttgccttcagca 37167781  T
Q  311 gaaaccatccattctaccaccaaaatcgtgacgcgccactcaaaatcgtgtcacaatt 368  Q
    |||||||| | |||| ||| |||||||||| | ||||||| ||||||| | |||||||    
T  37167780 gaaaccatacgttctgccaacaaaatcgtgtcacgccactgaaaatcgcgccacaatt 37167723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 44455139 - 44455042
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44455139 tttcactcacccaaggtgtttacaatgtttcccaacccaagaaaactctaatcaaagaccctcaaccctaaagttacctcctttgatttaccaagttt 44455042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 1833501 - 1833395
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||      
T  1833501 tttcactcacccaaggtgtttacaatgtttcccaatccaagagaactctaatcaaagaccctcaaccttaaagttatctcctttgatttcccaagtttct 1833402  T
Q  120 ctctctt 126  Q
    |||||||    
T  1833401 ctctctt 1833395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 3189309 - 3189204
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||      
T  3189309 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 3189211  T
Q  120 ctctctt 126  Q
    |||||||    
T  3189210 ctctctt 3189204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 3198126 - 3198021
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||      
T  3198126 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 3198028  T
Q  120 ctctctt 126  Q
    |||||||    
T  3198027 ctctctt 3198021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 3206965 - 3206860
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||      
T  3206965 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 3206867  T
Q  120 ctctctt 126  Q
    |||||||    
T  3206866 ctctctt 3206860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 3156844 - 3156739
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  3156844 tttcactcacc-agggtgtttacaatgtttccaaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 3156746  T
Q  120 ctctctt 126  Q
    |||||||    
T  3156745 ctctctt 3156739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 37503743 - 37503849
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||      
T  37503743 tttcactcacccaaggtgtttacaatattttccaacccaatagaactctaatcaaagaccctcaaccctaaagtcacctcctttgatttcccaagtttct 37503842  T
Q  120 ctctctt 126  Q
    |||||||    
T  37503843 ctctctt 37503849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 45644544 - 45644654
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||     
T  45644544 tttcactcacccaagatgtttacaatgttttccaacctaagagaaccctaatcaaagaccctcaaccctaaagttatctcctttgatttccctagttttt 45644643  T
Q  120 ctctcttgaag 130  Q
    |||||||||||    
T  45644644 ctctcttgaag 45644654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 4552826 - 4552942
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||   ||| ||||||||||||||||||||||||||||||| |||||||||||| ||    
T  4552826 tttccctcacccaaggtgtttacaatgtttctcaacccaagagaacctcaattaaagaccctcaaccctaaagttacctcctttaatttcccaagttctc 4552925  T
Q  120 ctctcttgaagttctct 136  Q
    ||||||||||| |||||    
T  4552926 ctctcttgaagctctct 4552942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 13659525 - 13659641
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||  |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||    
T  13659525 tttcactaccccaaggtgtttacaatgtttctcaacctaagagaactctaatcaaagaccctcaacccacaagttacctcctttgatttcccaagttgtc 13659624  T
Q  120 ctctcttgaagttctct 136  Q
     |||||||||| |||||    
T  13659625 atctcttgaagctctct 13659641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 20762650 - 20762535
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||      
T  20762650 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttct 20762552  T
Q  120 ctctcttgaagttctct 136  Q
    ||||||| ||| |||||    
T  20762551 ctctcttcaagctctct 20762535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 46064897 - 46064782
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||  ||||||||||||||||||  ||||||||||| |||||||||||||||||||     
T  46064897 tttcactcacccaaggtgtttacaatgttttccaccccaagagaaccataatcaaagaccctcaacaataaagttaccttctttgatttcccaagttttt 46064798  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||||||| ||||    
T  46064797 ctctcttgaagctctc 46064782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 49918329 - 49918222
Alignment:
Q  20 tttcactcacccaaggtgttt-acaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  49918329 tttcactcacccaaggtgttttataatgtttcccaatccaagagaactctaatcaaagaccttcaaccctaaagttacctcctttgatttcccaagtttc 49918230  T
Q  119 cctctctt 126  Q
     |||||||    
T  49918229 tctctctt 49918222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 50169399 - 50169509
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||| ||||| ||| ||||||||||||||||||||||||||||||||||| |||||      
T  50169399 tttcactcacccaaggtatttacaatgtttcccaacccaagataaccctaataaaaaaccctcaaccctaaagttacctcctttgatttccctagtttct 50169498  T
Q  120 ctctcttgaag 130  Q
    |||||||||||    
T  50169499 ctctcttgaag 50169509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 928166 - 928265
Alignment:
Q  20 tttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  928166 tttcactcacccaaggtgtttacaaatgtttcccaacccaagagaatcctaatcaaagaccttcaaccataaagttacctcctttgatttcccaagtttt 928265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 13316517 - 13316613
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |  |||||||||||||||||||  |||||||    
T  13316517 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgctacctttgatttcccaagtttctctctctt 13316613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 30476637 - 30476752
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||  |||| || |||||||||||||||||      
T  30476637 tttcacccacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaataccctcagccctaacattacatcatttgatttcccaagtttct 30476736  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  30476737 ctctcttcaagctctc 30476752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 37560058 - 37560164
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||      
T  37560058 tttcactcacctaatgtgtttacaatgttttcaaacccaagagaactctaatcaaagaccctcaaccttaaagttacctcatttgatttctcaagtttct 37560157  T
Q  120 ctctctt 126  Q
    |||||||    
T  37560158 ctctctt 37560164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 28 - 329
Target Start/End: Complemental strand, 47098693 - 47098400
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    |||||||||||||||||||||||||||||||||||||| ||    ||||||| |||||||||||||||||||||||||   ||| ||||||  ||||||     
T  47098693 acccaaggtgtttacaatgtttcccaacccaagagaacctcgctacaaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcta 47098595  T
Q  127 gaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcgccac-at 225  Q
     ||| ||||  || |  || | ||||        |||||||||| |||||||| ||||| |||| ||||| ||||||||| |  | ||||||||||| ||    
T  47098594 aaagctctcattcaaaatc-tgcaaa--------gaaacacttatatagtacacagtgacagacgaaatcgcgccgcgcctgtcagaatcgcgccacgat 47098504  T
Q  226 ttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaaccatccattc 324  Q
    || || ||||||||||||||||| || |||||||||| |||| ||| |||||| ||||  ||||||||| |||||| ||||||||| ||| |||||||||    
T  47098503 tttaaacgtacgacccaaggtacaacgaccttatccataaattgcgccacgccagtactgaatcgcgccgcgatttaccttcagca-aaaacatccattc 47098405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 50167364 - 50167487
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactc-------------taatcaaagaccctcaaccctaaagttacctcctttgat 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |             |||||||||||||||||||||||||||||||||||||||    
T  50167364 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaacccctcaagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgat 50167463  T
Q  107 ttcccaagttttcctctcttgaag 130  Q
    ||||| |||||  |||||||||||    
T  50167464 ttccctagtttctctctcttgaag 50167487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 28265743 - 28265865
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactc------------taatcaaagaccctcaaccctaaagttacctcctttgatt 107  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |            ||||||||||||||||||||||||||||||||||||||||    
T  28265743 tttcactcacccaaggtgtttacaatgtttcccaacctaagagaacccctcaagagaacctaatcaaagaccctcaaccctaaagttacctcctttgatt 28265842  T
Q  108 tcccaagttttcctctcttgaag 130  Q
    |||| |||||  |||||||||||    
T  28265843 tccctagtttctctctcttgaag 28265865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 161 - 315
Target Start/End: Original strand, 32889791 - 32889947
Alignment:
Q  161 gaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaa-tcgcgccac-atttgaagcgtacgacccaaggtacgacaacctta 258  Q
    |||||||||| |||||||| ||||| |||| ||||||||||||||| |  |||| ||| ||||| |||| |||||||||||||||||||| || ||||||    
T  32889791 gaaacacttatatagtacacagtgacagacgaaatcacgccgcgcctgctaaaaatcgtgccacgattttaagcgtacgacccaaggtacaacgacctta 32889890  T
Q  259 tccacaaatcgcgtcacgcctgtaccaatcgcgccacgatttgccttcagcagaaac 315  Q
    ||||||||||| | |||| | |||| ||  ||||| |||||||||||||||| ||||    
T  32889891 tccacaaatcgtgccacgtcagtacaaaatgcgccgcgatttgccttcagcaaaaac 32889947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 51765364 - 51765277
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||| ||||||  |||||||||||||||||||    
T  51765364 ccaaggtgtttacaatgtttcc-aacccaagagaagctctaatcaaagaccctaaaccctagagttactccctttgatttcccaagttt 51765277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 777222 - 777099
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactc-------------taatcaaagaccctcaaccctaaagttacctcctttgat 106  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |             |||||||||||| ||||||||||||||||||||||||||    
T  777222 tttcactcacccaaagtgtttacaatgtttcccaacccaagagaacccctcaagagaaccctaatcaaagaccatcaaccctaaagttacctcctttgat 777123  T
Q  107 ttcccaagttttcctctcttgaag 130  Q
    ||||| |||||  |||||||||||    
T  777122 ttccctagtttctctctcttgaag 777099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 28 - 329
Target Start/End: Complemental strand, 27104269 - 27103977
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttg 127  Q
    |||||||||| ||| ||||||||||||||||||||| |||    ||||||| ||||||| |||||||||||||||||   ||| ||||||  ||||||      
T  27104269 acccaaggtgcttataatgtttcccaacccaagagacctcactacaaagacactcaaccttaaagttacctcctttgtaatcc-aagtttctctctctaa 27104171  T
Q  128 aagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcgccac-att 226  Q
    ||| |||||||| |    || ||||        ||||||||||||||||||| ||||| |||| ||||| ||||||||| |  | ||||| ||||| |||    
T  27104170 aagctctctctcaaaaatctgcaaa--------gaaacacttaaatagtacacagtgacagac-aaatcgcgccgcgcctgtcagaatcgtgccacgatt 27104080  T
Q  227 tgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaaccatccattct 325  Q
    | || |||||||| |||||||| ||   ||||||||||||||||| | |||| ||||  ||||||||| || ||||||||||||| ||| |||| |||||    
T  27104079 ttaaacgtacgacgcaaggtacaacgttcttatccacaaatcgcgccgcgccagtactaaatcgcgccgcgctttgccttcagca-aaaacatcaattct 27103981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 233 - 338
Target Start/End: Complemental strand, 47114730 - 47114626
Alignment:
Q  233 gtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaa-tcgcgccacgatttgccttcagcagaaaccatccattctaccacc 331  Q
    |||||||||||||||| ||| ||||||||| |||||| ||||||| || || || |||||||| ||||||| |||||||||||||||||||||||||| |    
T  47114730 gtacgacccaaggtacaacagccttatccaaaaatcgtgtcacgc-tgcacaaaatcgcgccatgatttgc-ttcagcagaaaccatccattctaccagc 47114633  T
Q  332 aaaatcg 338  Q
    |||||||    
T  47114632 aaaatcg 47114626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 28 - 315
Target Start/End: Complemental strand, 47102707 - 47102427
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    ||||||||||||||||||||||||||||||||||||||   | | ||||||| |||||||||||||||||||||||||   ||| ||||||  ||||||     
T  47102707 acccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtaatcc-aagtttctctctcta 47102609  T
Q  127 gaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcgccac-at 225  Q
     ||| ||||  || |  || | ||||        |||||||||| |||||||| | ||| |||| |||||  | |||||| |  | ||||| ||||| ||    
T  47102608 aaagctctcattcaaaatc-tgcaaa--------gaaacacttatatagtacacactgacagacgaaatcgggtcgcgcctgtcagaatcgtgccacgat 47102518  T
Q  226 ttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaac 315  Q
    || || ||||||||||||||||| || ||||||||||||||||||| |||||| ||||  ||||||  | |||||| ||||||||| ||||    
T  47102517 tttaaacgtacgacccaaggtacaacgaccttatccacaaatcgcgccacgccagtactaaatcgcatcgcgatttaccttcagcaaaaac 47102427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 233 - 336
Target Start/End: Original strand, 34602930 - 34603032
Alignment:
Q  233 gtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaa-tcgcgccacgatttgccttcagcagaaaccatccattctaccacc 331  Q
    |||||||||||||||| || |||||||||| |||| | ||||||| || || || ||||||||| |||||| |||||||||||||||||||||||||| |    
T  34602930 gtacgacccaaggtacaacgaccttatccagaaattgtgtcacgc-tgcacaaaatcgcgccacaatttgc-ttcagcagaaaccatccattctaccagc 34603027  T
Q  332 aaaat 336  Q
    |||||    
T  34603028 aaaat 34603032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 249 - 338
Target Start/End: Original strand, 3847446 - 3847535
Alignment:
Q  249 gacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaaccatccattctaccaccaaaatcg 338  Q
    ||||||||||||||||||||||| |||||| | ||  |||||||||| ||||| |||||||||||||| ||||||||| ||| ||||||||    
T  3847446 gacaaccttatccacaaatcgcgccacgcccgcacaaaatcgcgccatgattt-ccttcagcagaaactatccattctgccagcaaaatcg 3847535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 233 - 338
Target Start/End: Original strand, 7482842 - 7482946
Alignment:
Q  233 gtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaa-tcgcgccacgatttgccttcagcagaaaccatccattctaccacc 331  Q
    |||||||||||||||| || |||||||||| |||||| ||||| | || || || |||||||| ||||||| |||||||||||||||||||||| ||| |    
T  7482842 gtacgacccaaggtacaacgaccttatccagaaatcgtgtcacac-tgcacaaaatcgcgccatgatttgc-ttcagcagaaaccatccattctgccagc 7482939  T
Q  332 aaaatcg 338  Q
    |||||||    
T  7482940 aaaatcg 7482946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 161 - 329
Target Start/End: Original strand, 9476615 - 9476784
Alignment:
Q  161 gaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcgcgccac-atttgaagcgtacgacccaaggtacgacaaccttat 259  Q
    |||||||||| |||||||| ||||| || | ||||| ||||||| | |  | ||||| ||||| |||  || ||||||||||||||||| || |||||||    
T  9476615 gaaacacttatatagtacacagtgacaggcgaaatcgcgccgcgtctgtcagaatcgtgccacgattctaaacgtacgacccaaggtacaacgaccttat 9476714  T
Q  260 ccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaaccatccattctacca 329  Q
    |||| ||||||| |||||  ||||  |||||||||  |||||||||||| || ||| ||||||||||||||    
T  9476715 ccacgaatcgcgccacgctagtactaaatcgcgccgtgatttgccttcaaca-aaaacatccattctacca 9476784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 22819660 - 22819737
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||| |||    ||||||| || || |||||||||||||||||||    
T  22819660 acccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactaaatcctaaagttacctcctttg 22819737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 29652042 - 29652119
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||||||| |||  |||    ||||||| |||||||||||||||||||||||||    
T  29652042 acccaaggtgtttacaatgtttcccaacccaaaagatcctcactacaaagacactcaaccctaaagttacctcctttg 29652119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 32889667 - 32889744
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||||||| | || |||    ||||||| |||||||||||||||||||||||||    
T  32889667 acccaaggtgtttacaatgtttcccaacccaaaaaaacctcactacaaagacactcaaccctaaagttacctcctttg 32889744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 233 - 329
Target Start/End: Complemental strand, 34603153 - 34603058
Alignment:
Q  233 gtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaa-tcgcgccacgatttgccttcagcagaaaccatccattctacca 329  Q
    |||||||||||||||| || |||||||||| |||| | ||||||| || || || ||||||||| |||||| ||||||||||||||||||||||||||    
T  34603153 gtacgacccaaggtacaacgaccttatccagaaattgtgtcacgc-tgcacaaaatcgcgccactatttgc-ttcagcagaaaccatccattctacca 34603058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 40816684 - 40816592
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    ||||||||||||||||||||||||||||||  ||||||||   | | ||||||| ||||||||| |||||||||||||||  |||||||||||    
T  40816684 acccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttacctcctttgtattcccaagttt 40816592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 47703803 - 47703711
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    ||||||||||||||||||||||||||||||  ||||||||   | | ||||||| |||||||||||||||||||||||||  ||| |||||||    
T  47703803 acccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtattctcaagttt 47703711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 43342443 - 43342555
Alignment:
Q  19 atttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    ||||||| ||||||| |||| || || |||||||||||| ||||||||||| | |||||||||||| ||| |||||||| ||||||  ||||| || |||    
T  43342443 atttcacccacccaaagtgtatagaaatgtttcccaaccgaagagaactctcaccaaagaccctcatcccaaaagttacatcctttagtttcctaacttt 43342542  T
Q  118 tcctctcttgaag 130  Q
      |||||||||||    
T  43342543 ctctctcttgaag 43342555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 44650352 - 44650448
Alignment:
Q  20 tttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagt 115  Q
    |||||||||||||| |||||||||| ||||| |||||  |||||||| || | ||||||| |||| ||||||| ||  |||||||||||||||||||    
T  44650352 tttcactcacccaaagtgtttacaaatgttttccaacttaagagaaccctcaccaaagactctcatccctaaaattttctcctttgatttcccaagt 44650448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 19073159 - 19073249
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    ||||||||||||||||||||||||||||  ||||||||   | | ||||||| ||||||||| |||||||||||||||  |||||||||||    
T  19073159 ccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttacctcctttgtattcccaagttt 19073249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 19121049 - 19121139
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    ||||||||||||||||||||||||||||  ||||||||   | | ||||||| ||||||||| |||||||||||||||  |||||||||||    
T  19121049 ccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttacctcctttgtattcccaagttt 19121139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 37069998 - 37070073
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||  |||    ||||||| ||||||| |||||||||||||||||    
T  37069998 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccataaagttacctcctttg 37070073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 3281936 - 3282013
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||| ||||||| |||||||||||| ||||    
T  3281936 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccataaagttacctcatttg 3282013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 13598629 - 13598706
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||| |||||||||||||  |||    ||||||| ||||||| |||||||||||||||||    
T  13598629 acccaaggtgtttacaatgtttgccaacccaagagatcctcactacaaagacactcaaccataaagttacctcctttg 13598706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 13604490 - 13604413
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||  ||||||||||||||| |||||||||    
T  13604490 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagatactcaaccctaaagttccctcctttg 13604413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 21536438 - 21536361
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||| |||||| |||||| |   | | ||||||| |||||||||||||||||||||||||    
T  21536438 acccaaggtgtttacaatgttttccaacctaagagatcctcactacaaagacactcaaccctaaagttacctcctttg 21536361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 24202635 - 24202556
Alignment:
Q  28 acccaaggtgtttacaatgttt--cccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||| |||||||||||  |||||||||||||| |||||   ||||||| ||||||||||||||| |||||||||    
T  24202635 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctaaagttccctcctttg 24202556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 16124382 - 16124347
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga 63  Q
    ||||||||||||||||||||||||||||||||||||    
T  16124382 acccaaggtgtttacaatgtttcccaacccaagaga 16124347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 26644763 - 26644689
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||| ||| ||  | | ||||||| |||||||||||| ||| ||||||||    
T  26644763 caaggtgtttacaatgtttcccaacccaaaagatcttcactacaaagacactcaaccctaaaattatctcctttg 26644689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 338
Target Start/End: Complemental strand, 28241947 - 28241843
Alignment:
Q  233 gtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaa-tcgcgccacgatttgccttcagcagaaaccatccattctaccacc 331  Q
    |||||||||||||||| ||  ||||||||| |||||| ||||||| || || || | |||||| ||||||| |||||||||||||||||||||| | | |    
T  28241947 gtacgacccaaggtacaacggccttatccagaaatcgtgtcacgc-tgcacaaaattgcgccatgatttgc-ttcagcagaaaccatccattctgcaagc 28241850  T
Q  332 aaaatcg 338  Q
    |||||||    
T  28241849 aaaatcg 28241843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 8281547 - 8281639
Alignment:
Q  28 acccaaggtgtttacaa-tgtttcccaacccaagagaa--ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    ||||||||||||||||| || |||||||| ||||| ||  |||| ||||||||  | |||||||||||||  |||||||||||| ||||||||    
T  8281547 acccaaggtgtttacaaatggttcccaacacaagaaaaaactctcatcaaagatgcccaaccctaaagttctctcctttgattttccaagttt 8281639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 9476491 - 9476568
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||| ||||||||||||||||||||| ||||||| |||    |||||||  ||||||| ||||||||||||||||    
T  9476491 acccaagatgtttacaatgtttcccaaccaaagagaacctcactacaaagacattcaacccaaaagttacctcctttg 9476568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 16455580 - 16455527
Alignment:
Q  65 ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||| ||||||||||||||| |||||| |||||||||||||||| ||| ||||    
T  16455580 ctctattcaaagaccctcaactctaaagatacctcctttgatttctcaattttt 16455527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 40282353 - 40282257
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  |||||||||||||||||||  |||||||    
T  40282353 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtttctctctctt 40282257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 2263166 - 2263253
Alignment:
Q  19 atttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttga 105  Q
    |||||||||  ||||| ||||||||| | ||||| ||| ||||||||| || | ||||||| |||||||||||| |||||||| ||||    
T  2263166 atttcactcgaccaagatgtttacaaatatttcctaactcaagagaaccctcaccaaagacactcaaccctaaaattacctcccttga 2263253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 9036393 - 9036309
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagt 115  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| || |||||||||||||||||    
T  9036393 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgatttcccaagt 9036309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 9987178 - 9987093
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagt 115  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  |||||||||||||||||    
T  9987178 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagt 9987093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 19361298 - 19361220
Alignment:
Q  28 acccaaggtgtttacaatg-tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||| |||||||||||||||||  |||    ||||||| |||||||||| |||| |||||||||    
T  19361298 acccaaggtgtttacaatgttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttg 19361220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 21053934 - 21053849
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagt 115  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  |||||||||||||||||    
T  21053934 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagt 21053849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 8871310 - 8871359
Alignment:
Q  81 tcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaag 130  Q
    |||||||||||||||||| ||||||| |||| |||||  |||||||||||    
T  8871310 tcaaccctaaagttacctgctttgatatccctagtttctctctcttgaag 8871359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 9022770 - 9022737
Alignment:
Q  32 aaggtgtttacaatgtttcccaacccaagagaac 65  Q
    ||||||||||||||||||| ||||||||||||||    
T  9022770 aaggtgtttacaatgtttctcaacccaagagaac 9022737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 41360894 - 41360857
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaaccc 57  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  41360894 tttcactcacccaagatgtttacgatgtttcccaaccc 41360857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 208; Significance: 1e-113; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 20 - 376
Target Start/End: Original strand, 28137597 - 28137955
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  28137597 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttaactcctttgattttccaagttttc 28137696  T
Q  120 ctctcttgaagttctctctc--cacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaatcg 217  Q
    ||||||||||||||||||||  | || ||||||||||||||||||||||||||||||||||| |||||  ||||||||  || |||||||   |||||||    
T  28137697 ctctcttgaagttctctctctcctctcccttcaaaaatgagctgaaacacttaaatagtacacagtgactgacaaaatagcgtcgcgccatccaaaatcg 28137796  T
Q  218 cgccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaatcgcgccacgatttgccttcagcagaaacca 317  Q
     | |||  |||| | |||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||| ||||| |||| ||||||||||||||||    
T  28137797 tgtcacgattgatgagtacgacccaaggtacgacaaccttatccataaatcgcatcacgcctgcacaaatcgtgccacaattttccttcagcagaaacca 28137896  T
Q  318 tccattctaccaccaaaatcgtgacgcgccactcaaaatcgtgtcacaattatgagttt 376  Q
    | | |||| ||| |||||||||| | ||||| ||| ||||||||||| |||||||||||    
T  28137897 tacgttctgccaacaaaatcgtgtcacgccattcataatcgtgtcacgattatgagttt 28137955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 20 - 325
Target Start/End: Complemental strand, 16567185 - 16566879
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  16567185 tttcactcacccaaggtgtttacaatgtttccaaacccaagagaactctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttc 16567086  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagac-aaaatcacgccgcgccagagaaaatcgc 218  Q
    ||||||||||||||||||||| | || ||||||||||||||||| ||||||||||||||| ||||| |||| |||||| |||| ||||   |||||| ||    
T  16567085 ctctcttgaagttctctctcctcctcattcaaaaatgagctgaagcacttaaatagtacacagtgacagacaaaaatcgcgccacgcctaggaaaattgc 16566986  T
Q  219 gccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaacca 317  Q
    |||||  ||||||||||||||||||||||||||||||| ||||||||||||||||| |  || ||  ||||||||||||||||| |||||||||||||||    
T  16566985 gccacggttgaagcgtacgacccaaggtacgacaacctcatccacaaatcgcgtcatggttgcacaaaatcgcgccacgatttg-cttcagcagaaacca 16566887  T
Q  318 tccattct 325  Q
    ||||||||    
T  16566886 tccattct 16566879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 20 - 338
Target Start/End: Complemental strand, 16569022 - 16568703
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||  ||||||||||||||||||||||    
T  16569022 tttcacttacccaaggtgtttacaatgtttccaaacccaagagaactctaatcaaagacccttaaccctaaatttaattcctttgatttcccaagttttc 16568923  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgataga-caaaatcacgccgcgccagagaaaatcgc 218  Q
    |||||||| |||||||||||  | |||||||||||||||||||||||||||||||||||| ||| | |||  |||||| ||||| |||   |||||||||    
T  16568922 ctctcttgtagttctctctcatcctccttcaaaaatgagctgaaacacttaaatagtacacagttacagataaaaatcgcgccgtgcctaggaaaatcgc 16568823  T
Q  219 gccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaacca 317  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||  || ||  ||||||||||||||||| |||||||||||||||    
T  16568822 gccacagttgaagcgtacgacccaaggtacgacaaccttatccacaaattgcgtcacggttgcacaaaatcgcgccacgatttg-cttcagcagaaacca 16568724  T
Q  318 tccattctaccaccaaaatcg 338  Q
    || |||||  || ||||||||    
T  16568723 tctattctggcagcaaaatcg 16568703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 202 - 376
Target Start/End: Complemental strand, 5043217 - 5043043
Alignment:
Q  202 gcgccagagaaaatcgcgccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaatcgcgccacgatttg 301  Q
    |||||||  ||||||||||||   ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| || |||||| ||||||||||    
T  5043217 gcgccagccaaaatcgcgccatggttgaagcgtacgatccaaggtacgataaccttatccacaaatcgcgtcacgcctgcacaaatcgcaccacgatttg 5043118  T
Q  302 ccttcagcagaaaccatccattctaccaccaaaatcgtgacgcgccactcaaaatcgtgtcacaattatgagttt 376  Q
    ||||||||||||||||| | |||| ||| |||||| ||| | ||||||||| |||||||||||||||||||||||    
T  5043117 ccttcagcagaaaccatacgttctgccaacaaaattgtgtcacgccactcataatcgtgtcacaattatgagttt 5043043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 9183220 - 9183335
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  9183220 tttcactcacccaaggtgtttacaatgtttcccaacccaggagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 9183319  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  9183320 ctctcttcaagctctc 9183335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 26954474 - 26954593
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||| || ||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26954474 tttcactccccaaaggtgtttacaatgtttcccaacctaagataactctaatcaaagactctcaaccctaaagttacctcctttgatttcccaagttttc 26954573  T
Q  120 ctctcttgaagttctctctc 139  Q
    ||||||||||| ||||||||    
T  26954574 ctctcttgaagctctctctc 26954593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 33160543 - 33160641
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  33160543 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagactctcaaccctaaagttacctcctttgattccccaagttttc 33160641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 28 - 135
Target Start/End: Original strand, 33211382 - 33211489
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttg 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||  |||||||     
T  33211382 acccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaactgtaaagttacctcctttgatttcccaagtttctctctcttc 33211481  T
Q  128 aagttctc 135  Q
    || |||||    
T  33211482 aacttctc 33211489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 5406388 - 5406493
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||      
T  5406388 tttcactcacc-aaggtgtttacaatgtttcccaacccgagagaactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttct 5406486  T
Q  120 ctctctt 126  Q
    |||||||    
T  5406487 ctctctt 5406493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 5410713 - 5410818
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||      
T  5410713 tttcactcacc-aaggtgtttacaatgtttcccaacccgagagaactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttct 5410811  T
Q  120 ctctctt 126  Q
    |||||||    
T  5410812 ctctctt 5410818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 5413582 - 5413678
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    ||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  5413582 tttcactcacc-aatgtgtttacaatgtttcccaacccgagagaactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagttt 5413678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 31404863 - 31404978
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatc-aaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||     
T  31404863 tttcactcacc-aaggtgtttacaatgttttccaacccaagagaactctaatcaaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttc 31404961  T
Q  119 cctctcttgaagttctc 135  Q
     ||||||| ||| ||||    
T  31404962 tctctcttcaagctctc 31404978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 16452519 - 16452624
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||| | | ||||||||||||||||||      
T  16452519 tttcactcacc-aaggtgtttacaatgtttctcaacccaagagaactctaatcaaagaccctaaactctaaagttgcttactttgatttcccaagtttct 16452617  T
Q  120 ctctctt 126  Q
    |||||||    
T  16452618 ctctctt 16452624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 2171720 - 2171826
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||| |  |||||||||||||||||||     
T  2171720 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaaactctaatcaaagaccctaaaccctagagttgctccctttgatttcccaagtttc 2171818  T
Q  119 cctctctt 126  Q
     |||||||    
T  2171819 tctctctt 2171826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 30834726 - 30834840
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||| | |||||||||||| |||||||      
T  30834726 tttcactcaccga-ggtgtttacaatgtttctcaacccaagagaactctaatcaaagaccataaaccctaaagttgcttcctttgatttctcaagtttct 30834824  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  30834825 ctctcttcaagctctc 30834840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 3039092 - 3039221
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaact-------------ctaatcaaagaccctcaaccctaaagttacctcctttgat 106  Q
    |||||||||| |||||||||||||||||||||||||||||||||||              |||||||||||||||||||||||||||||||||||||||     
T  3039092 tttcactcactcaaggtgtttacaatgtttcccaacccaagagaacctctcaagaaaaccctaatcaaagaccctcaaccctaaagttacctcctttga- 3039190  T
Q  107 ttcccaagttttcctctcttgaagttctctc 137  Q
    |||||||||||| ||||||||||| ||||||    
T  3039191 ttcccaagtttttctctcttgaagctctctc 3039221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 5757346 - 5757269
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||||||||||| |   ||| ||||||| |||||||||||||||||||||||||    
T  5757346 acccaaggtgtttacaatgtttcccaacccaagagatcctaaatacaaagacactcaaccctaaagttacctcctttg 5757269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 3072952 - 3073039
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| |||| |  |||||||||||||||||||    
T  3072952 caaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagtttctccctttgatttcccaagttt 3073039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 6097622 - 6097720
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    ||||||||||| ||||||||||| ||||||||||||| |||||| ||||||||||||| ||||| ||||||| |||| |  |||||||||||||||||||    
T  6097622 tttcactcacc-aaggtgtttaccatgtttcccaaccaaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagttt 6097720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 161 - 315
Target Start/End: Original strand, 31936928 - 31937085
Alignment:
Q  161 gaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagagaaaa-tcgcgccac-atttgaagcgtacgacccaaggtacgacaacctta 258  Q
    |||||||||| |||||||| ||||| || | ||||| ||||||||| |  |||| ||| ||||| |||| || ||||||||| ||| ||| ||  |||||    
T  31936928 gaaacacttatatagtacacagtgacagtcgaaatcgcgccgcgcctgttaaaaatcgtgccacgattttaaacgtacgacctaagatacaacgtcctta 31937027  T
Q  259 tccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaac 315  Q
    ||||||||||||| |||||| ||||  ||||||||| |||||||||||||||| ||||    
T  31937028 tccacaaatcgcgccacgccagtactaaatcgcgccgcgatttgccttcagcaaaaac 31937085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 24435839 - 24435763
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||| |||||||||   |  ||||||| |||||||||||||||| ||||||||    
T  24435839 acccaaggtgtttacaatgtttcccaactcaagagaacctcacacaaagacactcaaccctaaagttatctcctttg 24435763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 5572111 - 5572038
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcc 100  Q
    |||||||||||||||||||||||||||||||||||| | | | | ||||||| | |||||||||||||||||||    
T  5572111 acccaaggtgtttacaatgtttcccaacccaagagatccccactacaaagacacccaaccctaaagttacctcc 5572038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 31936804 - 31936881
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||||||| |||  |||    ||||||| |||||||||||||||||||||||||    
T  31936804 acccaaggtgtttacaatgtttcccaacccaatagatcctcactacaaagacactcaaccctaaagttacctcctttg 31936881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 31979741 - 31979818
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||| |||||||| |||| |||    ||||||| |||||||||||||||||||||||||    
T  31979741 acccaaggtgtttacaatgtttctcaacccaaaagaacctcactacaaagacactcaaccctaaagttacctcctttg 31979818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 5017364 - 5017287
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||| |||||||||||||||| ||| ||||    
T  5017364 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttatctcgtttg 5017287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 22963928 - 22964005
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||| |||||||| ||  | | ||||||| |||||||||||||||| ||| ||||    
T  22963928 acccaaggtgtttacaatgtttcccaatccaagagatcttcactacaaagacactcaaccctaaagttagctcttttg 22964005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 23824465 - 23824388
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||| |||||||| ||  | | ||||||| |||||||||||||||| ||| ||||    
T  23824465 acccaaggtgtttacaatgtttcccaatccaagagatcttcactacaaagacactcaaccctaaagttagctcttttg 23824388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 412077 - 411982
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    |||||||||| | |||||| | |||||||||||| |||||||||||||| || ||||||| ||||||  ||||||||||| |||||||  |||||||    
T  412077 caaggtgtttcccatgttttc-aacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttctcaagtttctctctctt 411982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 138
Target Start/End: Complemental strand, 30517954 - 30517881
Alignment:
Q  63 aactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctctct 138  Q
    |||||| | ||||||| |||||| |||||||| |||| |||||||||||||||||  ||||||||||| |||||||    
T  30517954 aactctcaccaaagacactcaactctaaagttccctcatttgatttcccaagttt--ctctcttgaagctctctct 30517881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 22709241 - 22709316
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||  |||    ||||||| |||||||||| |||| |||||||||    
T  22709241 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttg 22709316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 233 - 321
Target Start/End: Original strand, 2973551 - 2973638
Alignment:
Q  233 gtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaaccatcca 321  Q
    |||||||||||||||| || |||||||||| |||||| |||||| ||| ||  ||||||||||||||||| | |||| ||||||||||||    
T  2973551 gtacgacccaaggtacaacgaccttatccagaaatcgtgtcacg-ctgcacaaaatcgcgccacgatttg-cgtcagtagaaaccatcca 2973638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 21801212 - 21801120
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacc--caagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||||||||||||||||||  |||||||| |||    ||||||| ||||||||| ||||||||| |||||  ||| |||||||    
T  21801212 acccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttacctgctttgtattctcaagttt 21801120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 21356266 - 21356301
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga 63  Q
    |||||||||||||||||||||||| |||||||||||    
T  21356266 acccaaggtgtttacaatgtttcctaacccaagaga 21356301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 30684121 - 30684212
Alignment:
Q  47 tttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctctc 137  Q
    ||||||||||||| ||||| | | |||||| |  ||||||||||||||||| |  |||||||| ||||||||  ||||||||||| ||||||    
T  30684121 tttcccaacccaaaagaacctttcatcaaatatgctcaaccctaaagttacttgatttgatttaccaagtttctctctcttgaagctctctc 30684212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 4045402 - 4045356
Alignment:
Q  20 tttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 65  Q
    |||||||||||| |||||||||| ||||||||||||| |||||||||    
T  4045402 tttcactcaccctaggtgtttacaaatgtttcccaactcaagagaac 4045356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 14521903 - 14521982
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacc--caagagaactctaa--tcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||   |||||||  | ||||||||||||||||| ||||    
T  14521903 acccaaggtgtttacaatgtttcccaaccctcaagagaac-ctaactacaaagacattaaaccctaaagttacctcatttg 14521982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 115
Target Start/End: Complemental strand, 27647819 - 27647754
Alignment:
Q  52 caacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagt 115  Q
    |||||||||||| |||||||||||||| |||| ||||||| |||| |  |||||||||||||||||    
T  27647819 caacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaagt 27647754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 72 - 104
Target Start/End: Complemental strand, 10077014 - 10076982
Alignment:
Q  72 caaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||| |||||||||||||||||||||||||    
T  10077014 caaagacactcaaccctaaagttacctcctttg 10076982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 137
Target Start/End: Original strand, 20505073 - 20505164
Alignment:
Q  45 tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagttctctc 137  Q
    ||||||||||||||||| |||||| | ||||| | ||| | |||||||||||||| |||| ||| ||||| ||  |||| |||||| ||||||    
T  20505073 tgtttcccaacccaaga-aactctcaccaaaggctctcgatcctaaagttacctcttttggttttccaagattctctctgttgaagctctctc 20505164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 165; Significance: 6e-88; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 20 - 223
Target Start/End: Complemental strand, 5871799 - 5871595
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  5871799 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagacccataaccctaaagttacctcctttgatttcccaagttttc 5871700  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgccagag-aaaatcgc 218  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||| ||||| | ||||||||    
T  5871699 ctctcttgaagttctctctcctcttccttcaaaaatgagctgaaacacttaaatagtacacagtgacagacaaaatcgcgccgtgccagtgaaaaatcgc 5871600  T
Q  219 gccac 223  Q
    |||||    
T  5871599 gccac 5871595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 20 - 184
Target Start/End: Original strand, 13009620 - 13009784
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  13009620 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagacccttaaccctaaagttacctcatttgatttcccaagttttc 13009719  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtg 184  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  13009720 ctctcttgaagttctctctccacccccttcaaaaatgagctgaaacacttaaatagtacatagtg 13009784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 20 - 376
Target Start/End: Original strand, 47038598 - 47038949
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  47038598 tttcactcacccaaggtgtttataatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttaactcctttgatttccccagttttc 47038697  T
Q  120 ctctcttgaagttctctctccacttccttcaaaaatgagctgaaacacttaaatagtacaaagtgatagacaaaatcacgccgcgcca-gagaaaatcgc 218  Q
     ||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| | ||| ||||||||   || | |||||    |||| ||     
T  47038698 ttctcttgaagttctctctctatctccttcaaaaatgagctgaaacacttaaatagtacacaatgacagacaaaactgcgtcacgccacccaaaaaccgt 47038797  T
Q  219 gccacatttgaagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaatcgcgccacga-tttgccttcagcagaaacca 317  Q
    | |||  |||  | ||||       ||||||||| ||||| ||| |||||  |||||||||| || ||||||||||||| |||||||||||||| |||||    
T  47038798 gtcacgattggtgagtac-------ggtacgacagccttacccagaaatcttgtcacgcctgcacaaatcgcgccacgattttgccttcagcaggaacca 47038890  T
Q  318 tccattctaccaccaaaatcgtgacgcgccactcaaaatcgtgtcacaattatgagttt 376  Q
    | | |||| ||| |||||| ||| |  |||||||| ||||||||||  |||||||||||    
T  47038891 tacgttctgccaacaaaattgtgtcatgccactcataatcgtgtcatgattatgagttt 47038949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 48143021 - 48142915
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  48143021 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 48142922  T
Q  120 ctctctt 126  Q
    |||||||    
T  48142921 ctctctt 48142915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 52082846 - 52082952
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  52082846 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 52082945  T
Q  120 ctctctt 126  Q
    |||||||    
T  52082946 ctctctt 52082952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 24969091 - 24968975
Alignment:
Q  20 tttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  24969091 tttcactcacccaaggtgtttacaaatgtttcccaacccaagagaactctaatcaaagaccgtcaaccttaaagttacctcctttgatttcccaagtttt 24968992  T
Q  119 cctctcttgaagttctc 135  Q
     ||||||||||||||||    
T  24968991 tctctcttgaagttctc 24968975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 5429658 - 5429543
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||      
T  5429658 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacttcctttgatttcccaagtttct 5429559  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  5429558 ctctcttcaagctctc 5429543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 52095551 - 52095657
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||      
T  52095551 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagtccctcaaccctaaagttacctcctttgatttcccaagtttct 52095650  T
Q  120 ctctctt 126  Q
    |||||||    
T  52095651 ctctctt 52095657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 54200095 - 54200201
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||      
T  54200095 tttcactcacccaatgtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcctaagtttct 54200194  T
Q  120 ctctctt 126  Q
    |||||||    
T  54200195 ctctctt 54200201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 56178826 - 56178941
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||      
T  56178826 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccttcaaccctaaagttacctcctttgatttcccaagtttct 56178924  T
Q  120 ctctcttgaagttctct 136  Q
    ||||||| ||| |||||    
T  56178925 ctctcttcaagctctct 56178941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 12739742 - 12739845
Alignment:
Q  23 cactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctc 122  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||    
T  12739742 cactcacctaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctc 12739841  T
Q  123 tctt 126  Q
    ||||    
T  12739842 tctt 12739845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 12747948 - 12748051
Alignment:
Q  23 cactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctc 122  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||    
T  12747948 cactcacctaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctc 12748047  T
Q  123 tctt 126  Q
    ||||    
T  12748048 tctt 12748051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 26175825 - 26175940
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||      
T  26175825 tttcactcacccaaggtgtttacaatgtttcccaacccaacagaactttaatcaaagaccctcaactctaaagttacctcctttgatttcccaagtttct 26175924  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  26175925 ctctcttcaagctctc 26175940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 9927647 - 9927752
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||      
T  9927647 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttct 9927745  T
Q  120 ctctctt 126  Q
    |||||||    
T  9927746 ctctctt 9927752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 37740604 - 37740499
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||      
T  37740604 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaacttacctcctttgatttcccaagtttct 37740506  T
Q  120 ctctctt 126  Q
    |||||||    
T  37740505 ctctctt 37740499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 34570603 - 34570700
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34570603 tttcactcacccaagatgttttcaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagctacctcctttgatttcccaagttt 34570700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 233 - 376
Target Start/End: Complemental strand, 46703058 - 46702915
Alignment:
Q  233 gtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaatcgcgccacgatttgccttcagcagaaaccatccattctaccacca 332  Q
    |||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  | |||| | | ||    
T  46703058 gtacgacccaaggtacaacgaccttatccacaaatcgcgtcacgcctgcaccaatcgcgccacgatttgccttcagcagaaaccacacgttctgcaaaca 46702959  T
Q  333 aaatcgtgacgcgccactcaaaatcgtgtcacaattatgagttt 376  Q
    |||||| | | | ||||||| ||||||||||| |||||||||||    
T  46702958 aaatcgcgtcacaccactcataatcgtgtcacgattatgagttt 46702915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 52467543 - 52467654
Alignment:
Q  20 tttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| |||||     
T  52467543 tttcactcacccaaggtgtttacaaatgtttcccaacccaagagaaccctaatcaaagaccctcaaccctaaaattacctcctttgattaccctagtttc 52467642  T
Q  119 cctctcttgaag 130  Q
     |||||||||||    
T  52467643 tctctcttgaag 52467654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 12745625 - 12745731
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||      
T  12745625 tttcactcacccaaggtgtttacattgtttcccaaaccaagagaactctaatcaaagaccctcaactctaaagttacctccttttttttcccaagtttct 12745724  T
Q  120 ctctctt 126  Q
    |||||||    
T  12745725 ctctctt 12745731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 29254473 - 29254376
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||    
T  29254473 tttcattcacccaatgtgtttacaatgtttcccaacccaagagaactctactcaaagaccttcaaccctaaagttatctcctttgatttcccaagttt 29254376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 29999995 - 30000109
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||      
T  29999995 tttcactcacc-aaggtgtttacaatgtttccaaacccaagagaactctaatcaaagaccctaaaccctaaagttgtctcctttgatttcccaagtttct 30000093  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||| ||||    
T  30000094 ctctcttcaagctctc 30000109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 13992475 - 13992596
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |  |||||||||||||||||||     
T  13992475 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagagactctaatcaaagaccctaaaccctaaagttgctacctttgatttcccaagtttc 13992573  T
Q  119 cctctcttgaagttctctctcca 141  Q
     ||||||| ||| |||| |||||    
T  13992574 tctctcttcaagctctccctcca 13992596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 36994503 - 36994398
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||      
T  36994503 tttcactcacccaaggtgtttacaatgtttgccaaatcaagagaactctaatcaaagaccctcaa-ccaaaagttacctcctttgattttccaagtttct 36994405  T
Q  120 ctctctt 126  Q
    |||||||    
T  36994404 ctctctt 36994398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 52093882 - 52093959
Alignment:
Q  49 tcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  52093882 tcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctctt 52093959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 5370276 - 5370390
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| ||| |||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||||||| |||||||      
T  5370276 tttcactcaccaaag-tgtttacaatgtttcccagcccaagagaactataatcaaagaccctaaaccctaaagttgtctcctttgatttctcaagtttct 5370374  T
Q  120 ctctcttgaagttctc 135  Q
    ||||||| ||||||||    
T  5370375 ctctcttcaagttctc 5370390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 3910075 - 3909977
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaa 129  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||| |||| |||||    
T  3910075 caaggtgtttacaatgtttctcaacctaagagaactctaatcaaaggccctaaacccttaagttacctcctttgatttccctagtttttctcttttgaa 3909977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 45687371 - 45687495
Alignment:
Q  19 atttcactcacccaaggtgtttacaatgtttcccaacccaagagaactc-------------taatcaaagaccctcaaccctaaagttacctcctttga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |             ||||||||||||||||||||||||||||||||||||||    
T  45687371 atttcactcacccaaggtgtttacaatgtttcccaacccaagagaacccctcaagagaaccctaatcaaagaccctcaaccctaaagttacctcctttga 45687470  T
Q  106 tttcccaagttttcctctcttgaag 130  Q
    |||||| |||||  |||||||||||    
T  45687471 tttccctagtttctctctcttgaag 45687495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 5870156 - 5870027
Alignment:
Q  229 aagcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaaccatccattctac 327  Q
    |||||||||||||||||| |||||| ||||||||||||||| |||||||||| ||  |||||| |||||||||| ||| ||||||||||||||||||| |    
T  5870156 aagcgtacgacccaaggttcgacaaacttatccacaaatcgtgtcacgcctgcacaaaatcgcaccacgatttg-cttaagcagaaaccatccattctgc 5870058  T
Q  328 caccaaaatcgtgacgcgccactcaaaatcg 358  Q
    || |||||||||| | |||| || |||||||    
T  5870057 cagcaaaatcgtgccacgcctctgaaaatcg 5870027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 46147581 - 46147654
Alignment:
Q  57 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaag 130  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  46147581 caagaaaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgaag 46147654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 5208031 - 5208138
Alignment:
Q  20 tttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 118  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||| || | ||||||||| |||||||| |||||||||||||||||| |||| |||     
T  5208031 tttcactcacccaaggtgtttacaaatgtttcccaatccaagagaaccctcaccaaagacccgcaaccctatagttacctcctttgattttccaaatttc 5208130  T
Q  119 cctctctt 126  Q
     |||||||    
T  5208131 tctctctt 5208138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 6542370 - 6542455
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaat--caaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||  ||||||| |||||||||||||||||||||||||    
T  6542370 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaac-ctcattacaaagacactcaaccctaaagttacctcctttg 6542455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 36463577 - 36463701
Alignment:
Q  19 atttcactcacccaaggtgtttacaatgtttcccaacccaagagaac---tc----------taatcaaagaccctcaaccctaaagttacctcctttga 105  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||   ||          ||||||||||||||||| |||||||||||||||| |||    
T  36463577 atttcactcacccaaggtgtttacaatgtttcccaactcaagagaacctctcaagaaaaccttaatcaaagaccctcaatcctaaagttacctcctatga 36463676  T
Q  106 tttcccaagttttcctctcttgaag 130  Q
    ||||||||||||| |||||||||||    
T  36463677 tttcccaagtttttctctcttgaag 36463701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 48142567 - 48142651
Alignment:
Q  20 tttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctccttt 103  Q
    |||||||||||| | ||||||| || ||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  48142567 tttcactcacccgaagtgtttaaaaatgtttcccaactcaagagaaccctaatcaaagaccatcaaccctaaagttacctccttt 48142651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 31474129 - 31474059
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 90  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||  |||||||||||||||||||||||    
T  31474129 tttcactcacccaaagtgtttacaatgtttcccactccaagagaaccttaatcaaagaccctcaaccctaa 31474059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 190 - 338
Target Start/End: Complemental strand, 41964017 - 41963869
Alignment:
Q  190 caaaatcacgccgcgccagagaaaatcgcgccacatttgaa-gcgtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtaccaa-t 287  Q
    |||||||||||||||||||   ||||||||||||  || |  | |||||||||||||||| || ||||||||||||||||| ||||||  || || || |    
T  41964017 caaaatcacgccgcgccagccgaaatcgcgccacggttcattgtgtacgacccaaggtacaacgaccttatccacaaatcgtgtcacgg-tgcacaaaat 41963919  T
Q  288 cgcgccacgatttgccttcagcagaaaccatccattctaccaccaaaatcg 338  Q
    ||||||||||||||| |||| ||||||||||||||||| ||| ||||||||    
T  41963918 cgcgccacgatttgc-ttcaacagaaaccatccattctgccagcaaaatcg 41963869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 6677449 - 6677360
Alignment:
Q  19 atttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactc-taatcaaagaccctcaaccctaaagttacctcctttgat 106  Q
    |||||||||| |||| |||||||||| ||||||||||||||||||||| | | | ||||||| |||||||||||||||||||||||||||    
T  6677449 atttcactcatccaatgtgtttacaaatgtttcccaacccaagagaacccctgaacaaagacactcaaccctaaagttacctcctttgat 6677360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 37229962 - 37230035
Alignment:
Q  57 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaag 130  Q
    ||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||  |||||||||||    
T  37229962 caagataaccctaatcaaagaccctaaaccctaaagttacctcctttgatttctcaagtttgtctctcttgaag 37230035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 31 - 126
Target Start/End: Original strand, 31495509 - 31495605
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    |||||||||| | ||||||||||||||||||||| ||||||||||||||  | ||||||| ||||||  |||||||||||||||||||  |||||||    
T  31495509 caaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactataaaccctagagttactccctttgatttcccaagtttctctctctt 31495605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 37755111 - 37755223
Alignment:
Q  19 atttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtt 116  Q
    |||||||||||| ||||||||||||| | ||||  || |||||||||| ||| | ||||||| ||||| ||||||||||||||||||||||| |||||||    
T  37755111 atttcactcacctaaggtgtttacaaatatttcataatccaagagaacctctcaccaaagactctcaatcctaaagttacctcctttgattttccaagtt 37755210  T
Q  117 ttcctctcttgaa 129  Q
    |  ||||||||||    
T  37755211 tctctctcttgaa 37755223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 10047610 - 10047687
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat--caaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||||||||||| | || ||  ||||||| |||||||||||||||||||||||||    
T  10047610 acccaaggtgtttacaatgtttcccaacccaagagatc-ctcattacaaagacactcaaccctaaagttacctcctttg 10047687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 51337043 - 51336945
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||    |||||||  |||||||||||||||| |||||||  |||| ||||||    
T  51337043 tttcactcacccaaggtgtttacaatgttttccaacccaagagaacctcactacaaagacattcaaccctaaagttacttcctttgtattcctaagttt 51336945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 3777778 - 3777855
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||| |||||||||||||||||||||||||    
T  3777778 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttg 3777855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 5112466 - 5112543
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||| |||  | ||||||| ||||| |||||| ||||||||||||    
T  5112466 acccaaggtgtttacaatgtttcccaacccaagagaacctcacaacaaagacactcaaacctaaaattacctcctttg 5112543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 16623161 - 16623084
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||| |||||||||||||||||||||||||    
T  16623161 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttg 16623084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 16628740 - 16628663
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||| |||||||||||||||||||||||||    
T  16628740 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttg 16628663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 5269066 - 5268991
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||  |||    ||||||| |||||||||||||||||||||||||    
T  5269066 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttg 5268991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 21704040 - 21704127
Alignment:
Q  43 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaag 130  Q
    |||||||| |||||||||||||| || | |||||||  |||||| |||||||||||| ||||||||| |||||||  |||||||||||    
T  21704040 aatgtttctcaacccaagagaaccctcaccaaagactttcaaccttaaagttacctcatttgatttctcaagtttctctctcttgaag 21704127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 31985509 - 31985424
Alignment:
Q  19 atttcactcacccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||| ||||||||||||||||||||||||||||||||||||  ||| |  |||| || ||||||||||||||| |||||||||    
T  31985509 atttcact-acccaaggtgtttacaatgtttcccaacccaagagatcctcaatacaaaaacactcaaccctaaagttccctcctttg 31985424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 4587937 - 4587892
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaac 65  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  4587937 tttcactcacccaaggtgtttacaatgtttcccaacccatgagaac 4587892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 5396539 - 5396462
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||| |||||||||||||| ||||||||||    
T  5396539 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagtaacctcctttg 5396462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 23042977 - 23043090
Alignment:
Q  19 atttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtt 116  Q
    |||||| ||| ||||||||||||||| |||||||||| | |||||||| ||| | |||||||| |||||||||||||||  || ||||||||| ||||||    
T  23042977 atttcattcatccaaggtgtttacaaatgtttcccaatctaagagaacctcttaccaaagaccttcaaccctaaagttaaatcttttgatttctcaagtt 23043076  T
Q  117 ttcctctcttgaag 130  Q
    |  |||| ||||||    
T  23043077 tctctctgttgaag 23043090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 24334040 - 24334132
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacc--caagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||||||||||||||||||  |||||||| |||    ||||||| ||||||||||||||||||| |||||  |||||||||||    
T  24334040 acccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagactctcaaccctaaagttaccttctttgtattcccaagttt 24334132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 36315098 - 36315021
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||| |||||||||||||||||||||||||||||  ||||   ||||||| || ||||||||||||||||||||||    
T  36315098 acccaatgtgtttacaatgtttcccaacccaagagatcctctctacaaagacactaaaccctaaagttacctcctttg 36315021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 36329307 - 36329230
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||| |||||||||||||||||||||||||||||  ||||   ||||||| || ||||||||||||||||||||||    
T  36329307 acccaatgtgtttacaatgtttcccaacccaagagatcctctctacaaagacactaaaccctaaagttacctcctttg 36329230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 114
Target Start/End: Complemental strand, 6376030 - 6375960
Alignment:
Q  43 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaag 114  Q
    |||||| |||||||||||| | || | | |||||||||||||||||||| ||||||||||||||||||||||    
T  6376030 aatgttccccaacccaaga-atctttcaccaaagaccctcaaccctaaaattacctcctttgatttcccaag 6375960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 39593958 - 39594058
Alignment:
Q  31 caaggtgtttacaa-tgtttc-ccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttg 127  Q
    |||||||||||||| |||||| ||||||||||||||| | | ||||||||| | ||||| |||||||||||| |||||||||||||| ||  ||||||||    
T  39593958 caaggtgtttacaaatgtttctccaacccaagagaacctatcatcaaagactcccaaccttaaagttacctcatttgatttcccaaggtt--ctctcttg 39594055  T
Q  128 aag 130  Q
    |||    
T  39594056 aag 39594058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 25861898 - 25861824
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||||||||  |||    ||||||| ||||||||||||||||||| |||||    
T  25861898 caaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttaccttctttg 25861824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 6743283 - 6743206
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||| ||||| ||| |||||||||||||||    
T  6743283 acccaaggtgtttacaatgtttcccaacccaagagatcctcgctacaaagacactcaaacctcaagttacctcctttg 6743206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 37782092 - 37782197
Alignment:
Q  28 acccaaggtgtttacaa-tgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctct 125  Q
    ||||||||||||||||| ||||| ||||||||||||| | ||| | ||||||   ||||| ||||||||||||| ||||||||||||| |||| || |||    
T  37782092 acccaaggtgtttacaaatgttttccaacccaagagagcctctcaccaaagatattcaactctaaagttacctcatttgatttcccaaatttttctttct 37782191  T
Q  126 tgaagt 131  Q
    | ||||    
T  37782192 taaagt 37782197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 39774173 - 39774096
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||| |||||||| |||    |||| |  |||||||||||||||||||||||||    
T  39774173 acccaaggtgtttacaatgtttcccaactcaagagaacctcgttacaaataatctcaaccctaaagttacctcctttg 39774096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 48893831 - 48893918
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaaccc--aagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||||||| |||||  ||||||| |||    ||||||| ||||||||| || ||||||||||||    
T  48893831 tttcactcacccaaggtgtttacaatgtttccaaaccctaaagagaacctcactacaaagacactcaaccctcaaattacctcctttg 48893918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 8689362 - 8689287
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||| |||||||||||||||||||||  |||    ||||||| || ||||||||||||||||||||||    
T  8689362 ccaaggtgtttaaaatgtttcccaacccaagagatcctcactacaaagacactaaaccctaaagttacctcctttg 8689287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 338
Target Start/End: Complemental strand, 378936 - 378832
Alignment:
Q  233 gtacgacccaaggtacgacaaccttatccacaaatcgcgtcacgcctgtac-caatcgcgccacgatttgccttcagcagaaaccatccattctaccacc 331  Q
    |||||||||||| ||| ||| |||||||||||||||| |||||| ||| ||  ||||||| ||| ||||| |||||| |||||||||||||||| |||      
T  378936 gtacgacccaagatacaacagccttatccacaaatcgtgtcacg-ctgcacaaaatcgcgtcacaatttg-cttcagtagaaaccatccattctgccaat 378839  T
Q  332 aaaatcg 338  Q
    |||||||    
T  378838 aaaatcg 378832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 37229911 - 37229957
Alignment:
Q  20 tttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 65  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  37229911 tttcactcacccaaggtgtttacaaatgttttccaacccaagagaac 37229957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 3793948 - 3793856
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaaccc--aagagaactctaatc-aaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||||||||||| |||||||  ||||||||   | |  |||||| ||||||||||||||||||||||||   |||||||||||    
T  3793948 acccaaggtgtttacaatgttttccaaccctcaagagaacctcactataaagacactcaaccctaaagttacctcctttatattcccaagttt 3793856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 42599442 - 42599366
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||| |||||||||||||| ||||||| |||    ||||||| ||||| |||||||||||||||||||    
T  42599442 acccaaggtgtttagaatgtttcccaaccgaagagaacctcactacaaagacactcaa-cctaaagttacctcctttg 42599366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 5147909 - 5147981
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcct 101  Q
    |||| ||||||||||||||||||||| ||||||| |  || | ||||||| || |||||||||||||||||||    
T  5147909 ccaatgtgtttacaatgtttcccaactcaagagatccttactacaaagacactaaaccctaaagttacctcct 5147981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 73 - 115
Target Start/End: Complemental strand, 29056270 - 29056229
Alignment:
Q  73 aaagaccctcaaccctaaagttacctcctttgatttcccaagt 115  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  29056270 aaagaccctcaaccc-aaagttatctcctttgatttcccaagt 29056229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 5136041 - 5135954
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||| ||| | ||||||  |||||||||||| |||||||||||||| |||| ||||||| || | || |||||||||||||||||||    
T  5136041 caaggtatttcccatgtttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcc-cctttgatttcccaagttt 5135954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 268
Target Start/End: Original strand, 26700055 - 26700091
Alignment:
Q  232 cgtacgacccaaggtacgacaaccttatccacaaatc 268  Q
    ||||||||||||||||| | |||||||||||||||||    
T  26700055 cgtacgacccaaggtacaaaaaccttatccacaaatc 26700091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 44968017 - 44968129
Alignment:
Q  19 atttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||| ||||  ||||||||| ||||||| || |||||||||| || | |||| ||| |||||| |||| ||| || |||||||||  ||||| |    
T  44968017 atttcactcaaccaatttgtttacaaatgtttccaaatccaagagaaccctcaccaaataccttcaaccttaaaattatcttctttgatttttcaagtgt 44968116  T
Q  118 tcctctcttgaag 130  Q
      |||||||||||    
T  44968117 ctctctcttgaag 44968129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 72 - 104
Target Start/End: Original strand, 54867453 - 54867485
Alignment:
Q  72 caaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||| |||||||||||||||||||||||||    
T  54867453 caaagacactcaaccctaaagttacctcctttg 54867485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 20604 - 20710
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||      
T  20604 tttcactcacccaaggtgtttacaatgtctcccaacccaagataactctaatcaaagaccctcaaccctaaagttacctcctttgatttccaaagtttct 20703  T
Q  120 ctctctt 126  Q
    |||||||    
T  20704 ctctctt 20710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 81; Significance: 8e-38; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 149286 - 149402
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    |||||||  |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||    
T  149286 tttcactaccccaaggtgtttacaatgtttctcaacctaagagaactctaatcaaagaccctcaacccacaagttacctcctttgatttcccaagttgtc 149385  T
Q  120 ctctcttgaagttctct 136  Q
     |||||||||| |||||    
T  149386 atctcttgaagctctct 149402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 5914 - 5991
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||| |||||||||||||  |||    ||||||| ||||||| |||||||||||||||||    
T  5914 acccaaggtgtttacaatgtttgccaacccaagagatcctcactacaaagacactcaaccataaagttacctcctttg 5991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 133147 - 133070
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||  ||||||||||||||| |||||||||    
T  133147 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagaaactcaaccctaaagttccctcctttg 133070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 2726 - 2758
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagaga 63  Q
    |||||||||||||||||||||||||||||||||    
T  2726 caaggtgtttacaatgtttcccaacccaagaga 2758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 895 - 790
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |  |||||||||||||||||||      
T  895 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgctgcctttgatttcccaagtttct 797  T
Q  120 ctctctt 126  Q
    |||||||    
T  796 ctctctt 790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 434511 - 434406
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 119  Q
    ||||||||||| ||||| ||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||      
T  434511 tttcactcacc-aaggtatttaccatgttttccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttct 434413  T
Q  120 ctctctt 126  Q
    |||||||    
T  434412 ctctctt 434406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 11360 - 11457
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||| ||||||  |||||||||||||||||||  |||||||    
T  11360 ccaaggtgtttacaatgtttcccaacccaagagaagctctaatcaaagaccataaaccctagagttactccctttgatttcccaagtttctctctctt 11457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 8934 - 9031
Alignment:
Q  30 ccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||| || |||| ||||||  |||||||||||||||||||  |||||||    
T  8934 ccaaggtctttacaatgtttcccaacccaagagaagctctaatcaaagaccctaaagcctagagttactccctttgatttcccaagtttctctctctt 9031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 114532 - 114463
Alignment:
Q  57 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||    
T  114532 caagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctctt 114463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 114581 - 114537
Alignment:
Q  20 tttcactcacccaaggtgtttacaatgtttcccaacccaagagaac 65  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  114581 tttcactcacc-aaggtgtttacaatgtttcccaacccaagagaac 114537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 17480 - 17554
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcct 101  Q
    ||||||||||||||||||||||||||| |||||||| ||| | | ||||||| ||||||| ||||||||||||||    
T  17480 acccaaggtgtttacaatgtttcccaatccaagagatctccactacaaagacactcaaccgtaaagttacctcct 17554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 8285 - 8208
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    ||||||||||||||||||||||||||||||||||||  |||    ||||||| ||||||||||||||| |||||||||    
T  8285 acccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttccctcctttg 8208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 36700 - 36623
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||| |||||||||||||  |||    ||||||| |||||||||||||||||||||||||    
T  36700 acccaaggtgtttacaatgttttccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttg 36623  T

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Target: scaffold0087; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 43829 - 43752
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||||||||||||||||||||||||| |||  |||    ||||||| |||||||||||||||||||||||||    
T  43829 acccaaggtgtttacaatgtttcccaacccaaaagatcctcactacaaagacactcaaccctaaagttacctcctttg 43752  T

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Target: scaffold0036 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 85912 - 85989
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||| |||||||||||||||||||||||||||||  |||    ||||||| |||||||||||||||||||||||||    
T  85912 acccaaagtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttg 85989  T

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Target: scaffold0148 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 10960 - 11052
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacc--caagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 117  Q
    |||||||||||||||||||||||||||||  |||||||| |||    ||||||| ||||||| |||||||||||||||||  |||| ||||||    
T  10960 acccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccataaagttacctcctttgtattccaaagttt 11052  T

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Target: scaffold0129 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 19128 - 19199
Alignment:
Q  20 tttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaa 91  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||| || | ||||||| |||| |||||||    
T  19128 tttcactcacccaag-tgtttacaaatgtttcccaacccaagagaaccctcaccaaagactctcagccctaaa 19199  T

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Target: scaffold0286 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 22280 - 22217
Alignment:
Q  63 aactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 126  Q
    ||||||||||||||||||| ||||||| |||| |  |||||||||||||||||||  |||||||    
T  22280 aactctaatcaaagaccctaaaccctagagttgctccctttgatttcccaagtttctctctctt 22217  T

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Target: scaffold0219 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 27716 - 27756
Alignment:
Q  90 aagttacctcctttgatttcccaagttttcctctcttgaag 130  Q
    ||||||||||||||||||||||||||||| | |||||||||    
T  27716 aagttacctcctttgatttcccaagtttttcgctcttgaag 27756  T

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Target: scaffold0219; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 27631 - 27678
Alignment:
Q  19 atttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 65  Q
    |||||||||| ||||||||||||| ||||||||||||| |||||||||    
T  27631 atttcactcatccaaggtgtttacaaatgtttcccaactcaagagaac 27678  T

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Target: scaffold0098 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 45427 - 45462
Alignment:
Q  28 acccaaggtgtttacaatgtttcccaacccaagaga 63  Q
    ||||||||||||||||||||||| ||||||||||||    
T  45427 acccaaggtgtttacaatgtttcacaacccaagaga 45462  T

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Target: scaffold0078 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 275
Target Start/End: Original strand, 23959 - 24002
Alignment:
Q  232 cgtacgacccaaggtacgacaaccttatccacaaatcgcgtcac 275  Q
    |||| |||||||||||| |||||||||||||||||||| |||||    
T  23959 cgtatgacccaaggtacaacaaccttatccacaaatcgtgtcac 24002  T

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Target: scaffold0137 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 6250 - 6166
Alignment:
Q  31 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttcccaagt 115  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| || |||||||||||||||||    
T  6250 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgatttcccaagt 6166  T

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Target: scaffold0188 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 17818 - 17739
Alignment:
Q  28 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| |||||||||    
T  17818 acccaaggtgattacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccctcctttg 17739  T

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Target: scaffold0188; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 23911 - 23832
Alignment:
Q  28 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 104  Q
    |||||||||| ||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| |||||||||    
T  23911 acccaaggtgattacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccctcctttg 23832  T

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