View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6178_low_91 (Length: 215)

Name: NF6178_low_91
Description: NF6178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6178_low_91
NF6178_low_91
[»] chr7 (60 HSPs)
chr7 (1-191)||(39731302-39731487)
chr7 (1-199)||(14069875-14070075)
chr7 (1-199)||(14379903-14380103)
chr7 (1-191)||(35853841-35854032)
chr7 (1-199)||(23554966-23555166)
chr7 (1-199)||(20343831-20344023)
chr7 (1-199)||(29990981-29991179)
chr7 (1-199)||(19502104-19502304)
chr7 (1-191)||(24789775-24789959)
chr7 (23-191)||(25767010-25767178)
chr7 (9-199)||(41317476-41317668)
chr7 (1-199)||(47673985-47674185)
chr7 (1-199)||(48491505-48491705)
chr7 (1-186)||(4178701-4178886)
chr7 (1-191)||(43504204-43504390)
chr7 (1-191)||(48408728-48408922)
chr7 (1-199)||(4586087-4586287)
chr7 (9-199)||(8153276-8153468)
chr7 (3-199)||(27347745-27347943)
chr7 (3-199)||(41649053-41649250)
chr7 (1-199)||(25615789-25615979)
chr7 (1-192)||(38671271-38671464)
chr7 (1-199)||(31733011-31733211)
chr7 (1-199)||(47676178-47676378)
chr7 (1-189)||(18126570-18126760)
chr7 (1-199)||(1113583-1113783)
chr7 (1-199)||(26417242-26417442)
chr7 (1-199)||(43864170-43864370)
chr7 (54-196)||(6592385-6592523)
chr7 (1-70)||(24514934-24515002)
chr7 (1-198)||(30024775-30024974)
chr7 (54-199)||(18388802-18388943)
chr7 (54-199)||(18392238-18392379)
chr7 (1-199)||(48489357-48489557)
chr7 (54-196)||(6594603-6594741)
chr7 (1-199)||(496025-496225)
chr7 (1-199)||(32060364-32060559)
chr7 (93-199)||(34310758-34310863)
chr7 (68-199)||(4508748-4508874)
chr7 (93-199)||(22269994-22270099)
chr7 (93-190)||(29608758-29608854)
chr7 (25-192)||(31105442-31105612)
chr7 (1-70)||(2761475-2761544)
chr7 (1-70)||(4538713-4538782)
chr7 (93-199)||(2361014-2361119)
chr7 (93-199)||(6431992-6432097)
chr7 (93-199)||(48599376-48599481)
chr7 (98-199)||(2759239-2759339)
chr7 (9-153)||(12097944-12098093)
chr7 (54-142)||(1562103-1562187)
chr7 (9-70)||(24526070-24526131)
chr7 (127-199)||(32358096-32358166)
chr7 (93-199)||(2390303-2390408)
chr7 (9-199)||(36146450-36146643)
chr7 (93-199)||(8359358-8359464)
chr7 (127-199)||(6359994-6360064)
chr7 (93-199)||(3259016-3259121)
chr7 (129-199)||(23565103-23565171)
chr7 (149-199)||(1560708-1560757)
chr7 (144-199)||(24525544-24525596)
[»] chr4 (64 HSPs)
chr4 (1-191)||(13992343-13992528)
chr4 (1-199)||(56178679-56178878)
chr4 (1-199)||(29999848-30000047)
chr4 (1-199)||(52095404-52095604)
chr4 (1-199)||(9927500-9927699)
chr4 (1-199)||(37740552-37740751)
chr4 (1-191)||(31495366-31495552)
chr4 (1-199)||(48142968-48143169)
chr4 (1-199)||(5429605-5429805)
chr4 (1-199)||(12739592-12739792)
chr4 (1-199)||(12747798-12747998)
chr4 (1-199)||(34570456-34570656)
chr4 (1-199)||(12745478-12745678)
chr4 (1-199)||(5370125-5370328)
chr4 (54-199)||(8393380-8393520)
chr4 (54-199)||(8395589-8395729)
chr4 (1-192)||(54199955-54200148)
chr4 (1-199)||(36994450-36994650)
chr4 (1-199)||(47038453-47038651)
chr4 (1-199)||(26175678-26175878)
chr4 (1-183)||(52082715-52082899)
chr4 (93-199)||(12743967-12744072)
chr4 (93-199)||(12744089-12744194)
chr4 (93-199)||(12745356-12745461)
chr4 (1-199)||(5871746-5871946)
chr4 (1-199)||(7122616-7122809)
chr4 (1-199)||(7124835-7125028)
chr4 (24-199)||(48893680-48893862)
chr4 (1-70)||(13009604-13009673)
chr4 (9-199)||(36463431-36463623)
chr4 (93-199)||(6655977-6656082)
chr4 (93-199)||(26364257-26364362)
chr4 (1-192)||(24969037-24969231)
chr4 (1-199)||(52467396-52467597)
chr4 (9-199)||(4587892-4588085)
chr4 (91-199)||(50673889-50673995)
chr4 (93-199)||(8665429-8665534)
chr4 (93-199)||(27417007-27417112)
chr4 (93-199)||(40632466-40632571)
chr4 (93-199)||(46147433-46147538)
chr4 (93-199)||(41964436-41964542)
chr4 (68-199)||(46703500-46703627)
chr4 (54-196)||(5136049-5136188)
chr4 (54-196)||(5138274-5138413)
chr4 (93-199)||(379401-379506)
chr4 (93-199)||(12073413-12073518)
chr4 (93-199)||(41639447-41639552)
chr4 (93-199)||(54883041-54883146)
chr4 (36-199)||(3913408-3913574)
chr4 (93-197)||(35662462-35662565)
chr4 (9-70)||(6542354-6542415)
chr4 (5-70)||(29254424-29254489)
chr4 (93-192)||(2209734-2209833)
chr4 (94-199)||(8648161-8648265)
chr4 (9-192)||(45687231-45687417)
chr4 (96-200)||(50262742-50262845)
chr4 (9-67)||(51336998-51337056)
chr4 (9-199)||(37229763-37229957)
chr4 (87-199)||(12119553-12119666)
chr4 (23-70)||(31474097-31474145)
chr4 (127-192)||(31474207-31474270)
chr4 (144-192)||(13009493-13009538)
chr4 (93-160)||(41639284-41639353)
chr4 (87-199)||(5207884-5207996)
[»] chr5 (45 HSPs)
chr5 (1-191)||(26177816-26178000)
chr5 (1-191)||(16409408-16409593)
chr5 (1-191)||(18441698-18441883)
chr5 (1-191)||(9789274-9789459)
chr5 (1-199)||(25412688-25412886)
chr5 (1-199)||(29751202-29751394)
chr5 (1-191)||(13342987-13343178)
chr5 (1-199)||(29720298-29720490)
chr5 (1-199)||(29722458-29722650)
chr5 (1-191)||(36074093-36074286)
chr5 (1-191)||(30182515-30182706)
chr5 (1-199)||(32636750-32636950)
chr5 (1-199)||(13239678-13239877)
chr5 (54-199)||(22536332-22536471)
chr5 (1-199)||(30682964-30683162)
chr5 (3-199)||(39468591-39468789)
chr5 (10-143)||(26170717-26170844)
chr5 (11-199)||(37439070-37439267)
chr5 (1-199)||(13488129-13488329)
chr5 (1-199)||(42428472-42428672)
chr5 (54-199)||(10593244-10593384)
chr5 (1-192)||(31182899-31183090)
chr5 (1-199)||(28750697-28750897)
chr5 (1-199)||(533695-533895)
chr5 (1-199)||(8565988-8566188)
chr5 (1-199)||(25078054-25078247)
chr5 (1-199)||(25136023-25136216)
chr5 (1-199)||(33831606-33831806)
chr5 (1-199)||(42426277-42426477)
chr5 (1-199)||(537951-538151)
chr5 (93-199)||(213486-213591)
chr5 (93-199)||(40147282-40147387)
chr5 (54-191)||(40380076-40380209)
chr5 (54-191)||(40382287-40382420)
chr5 (1-70)||(5887589-5887658)
chr5 (1-192)||(16452007-16452199)
chr5 (1-70)||(42926819-42926888)
chr5 (54-196)||(16546615-16546754)
chr5 (1-70)||(19806310-19806378)
chr5 (93-199)||(28278337-28278442)
chr5 (1-68)||(3075833-3075900)
chr5 (93-199)||(5058068-5058171)
chr5 (54-196)||(16544393-16544532)
chr5 (93-199)||(38747026-38747131)
chr5 (94-197)||(9049386-9049488)
[»] chr8 (50 HSPs)
chr8 (1-191)||(44303780-44303973)
chr8 (1-191)||(17982579-17982771)
chr8 (1-191)||(19945409-19945602)
chr8 (1-191)||(31218183-31218375)
chr8 (1-199)||(3439438-3439629)
chr8 (1-199)||(12702676-12702880)
chr8 (1-196)||(25689889-25690077)
chr8 (1-199)||(34254373-34254570)
chr8 (1-199)||(42498120-42498320)
chr8 (1-191)||(1746269-1746460)
chr8 (1-191)||(2627668-2627854)
chr8 (1-199)||(15212712-15212912)
chr8 (1-199)||(34256549-34256746)
chr8 (1-199)||(33352076-33352276)
chr8 (1-199)||(43036349-43036549)
chr8 (1-192)||(4731584-4731777)
chr8 (1-199)||(27811204-27811404)
chr8 (1-199)||(6598898-6599098)
chr8 (1-199)||(6674351-6674551)
chr8 (1-199)||(30143268-30143466)
chr8 (1-199)||(3303712-3303912)
chr8 (1-199)||(5689197-5689397)
chr8 (9-199)||(40321014-40321206)
chr8 (93-191)||(9765766-9765863)
chr8 (1-199)||(18141746-18141946)
chr8 (1-70)||(41365020-41365089)
chr8 (1-199)||(41366656-41366856)
chr8 (93-199)||(4283545-4283650)
chr8 (93-199)||(42435033-42435138)
chr8 (93-199)||(44353814-44353919)
chr8 (1-199)||(4162426-4162622)
chr8 (1-70)||(10929726-10929794)
chr8 (1-191)||(1345421-1345613)
chr8 (54-196)||(15290508-15290647)
chr8 (54-196)||(15470877-15471016)
chr8 (54-196)||(42575369-42575508)
chr8 (1-190)||(1292514-1292705)
chr8 (93-199)||(18655421-18655526)
chr8 (93-199)||(40221766-40221871)
chr8 (11-70)||(4743376-4743435)
chr8 (3-70)||(18106251-18106318)
chr8 (127-199)||(30291663-30291733)
chr8 (93-199)||(40328800-40328906)
chr8 (1-45)||(4733735-4733778)
chr8 (94-199)||(10930241-10930345)
chr8 (93-190)||(11384006-11384102)
chr8 (147-199)||(4743256-4743306)
chr8 (23-70)||(8965864-8965913)
chr8 (1-45)||(10015074-10015117)
chr8 (127-192)||(10015137-10015199)
[»] chr3 (66 HSPs)
chr3 (1-191)||(5258194-5258386)
chr3 (1-191)||(5260373-5260565)
chr3 (1-199)||(45095091-45095289)
chr3 (1-199)||(801024-801218)
chr3 (1-199)||(37408385-37408584)
chr3 (35-191)||(7780054-7780204)
chr3 (1-199)||(19683931-19684131)
chr3 (1-191)||(9636176-9636369)
chr3 (1-196)||(6716434-6716622)
chr3 (1-196)||(54635059-54635247)
chr3 (1-199)||(40734424-40734624)
chr3 (1-199)||(7762192-7762391)
chr3 (1-192)||(7764394-7764583)
chr3 (1-191)||(23200188-23200379)
chr3 (1-200)||(5236497-5236698)
chr3 (1-199)||(39153403-39153603)
chr3 (1-191)||(23197989-23198180)
chr3 (1-199)||(760773-760973)
chr3 (1-199)||(22835044-22835244)
chr3 (1-199)||(29682285-29682485)
chr3 (1-199)||(44331471-44331671)
chr3 (1-199)||(9581209-9581408)
chr3 (1-199)||(45282917-45283112)
chr3 (1-192)||(51398740-51398933)
chr3 (1-199)||(29810794-29810994)
chr3 (9-199)||(29196428-29196622)
chr3 (9-197)||(31314379-31314569)
chr3 (1-192)||(32744485-32744668)
chr3 (1-199)||(3617383-3617576)
chr3 (9-199)||(44700520-44700713)
chr3 (54-199)||(25637412-25637553)
chr3 (1-199)||(40735309-40735509)
chr3 (1-199)||(53921545-53921745)
chr3 (1-199)||(16498956-16499155)
chr3 (30-199)||(4569906-4570078)
chr3 (1-199)||(29812989-29813189)
chr3 (93-199)||(30236146-30236251)
chr3 (93-199)||(34491233-34491338)
chr3 (54-196)||(4600789-4600928)
chr3 (68-199)||(6095641-6095767)
chr3 (93-199)||(46173378-46173483)
chr3 (30-144)||(5433971-5434091)
chr3 (9-192)||(23391958-23392143)
chr3 (95-199)||(54593727-54593830)
chr3 (54-196)||(4598568-4598707)
chr3 (54-196)||(10056203-10056342)
chr3 (54-196)||(10058425-10058564)
chr3 (54-196)||(10060647-10060786)
chr3 (54-196)||(10062869-10063008)
chr3 (54-196)||(10065091-10065230)
chr3 (54-196)||(10211379-10211518)
chr3 (93-200)||(46860495-46860601)
chr3 (1-192)||(32891029-32891223)
chr3 (54-196)||(10209159-10209298)
chr3 (9-70)||(23410502-23410563)
chr3 (54-163)||(10067313-10067419)
chr3 (93-192)||(49199518-49199617)
chr3 (1-84)||(6718618-6718700)
chr3 (93-190)||(43401852-43401949)
chr3 (35-70)||(2075230-2075265)
chr3 (1-70)||(9666640-9666710)
chr3 (130-199)||(40913352-40913419)
chr3 (93-199)||(41819565-41819670)
chr3 (1-70)||(26386654-26386723)
chr3 (93-199)||(47304272-47304377)
chr3 (132-199)||(55302014-55302079)
[»] chr2 (37 HSPs)
chr2 (1-191)||(4484380-4484573)
chr2 (1-199)||(6266625-6266817)
chr2 (1-199)||(29867795-29867995)
chr2 (1-191)||(45099681-45099872)
chr2 (1-199)||(5723298-5723496)
chr2 (1-199)||(32289498-32289690)
chr2 (1-191)||(30833271-30833464)
chr2 (1-199)||(34139812-34140013)
chr2 (1-191)||(4503183-4503374)
chr2 (1-199)||(2334460-2334659)
chr2 (1-199)||(36988118-36988317)
chr2 (1-192)||(42362278-42362471)
chr2 (1-199)||(14633867-14634068)
chr2 (1-199)||(38312166-38312366)
chr2 (1-143)||(36205760-36205905)
chr2 (1-199)||(723786-723986)
chr2 (1-192)||(11690427-11690620)
chr2 (54-199)||(13656074-13656214)
chr2 (9-199)||(36773496-36773688)
chr2 (1-199)||(17057411-17057611)
chr2 (1-199)||(17085394-17085594)
chr2 (1-199)||(36318051-36318251)
chr2 (54-199)||(12647428-12647569)
chr2 (1-192)||(11151640-11151833)
chr2 (1-199)||(6595048-6595248)
chr2 (1-199)||(33162492-33162692)
chr2 (1-169)||(24885587-24885759)
chr2 (1-70)||(39284811-39284880)
chr2 (93-199)||(45726950-45727055)
chr2 (23-199)||(11067252-11067431)
chr2 (1-66)||(14202584-14202649)
chr2 (93-192)||(35446933-35447031)
chr2 (93-199)||(1631774-1631879)
chr2 (31-70)||(17450546-17450586)
chr2 (10-70)||(13121703-13121764)
chr2 (93-199)||(42288152-42288257)
chr2 (4-70)||(12123757-12123824)
[»] chr6 (40 HSPs)
chr6 (1-191)||(2171582-2171773)
chr6 (1-199)||(5406242-5406440)
chr6 (1-199)||(5410567-5410765)
chr6 (1-199)||(31404717-31404915)
chr6 (1-191)||(16452379-16452571)
chr6 (1-191)||(30834586-30834778)
chr6 (1-199)||(33160394-33160595)
chr6 (1-199)||(5413436-5413634)
chr6 (54-196)||(27647847-27647983)
chr6 (1-191)||(3072809-3072995)
chr6 (1-191)||(16554803-16554987)
chr6 (1-191)||(16631359-16631543)
chr6 (1-199)||(9183073-9183273)
chr6 (1-191)||(16653046-16653230)
chr6 (1-199)||(28137450-28137650)
chr6 (1-191)||(412035-412220)
chr6 (54-191)||(16578568-16578700)
chr6 (54-191)||(16616680-16616812)
chr6 (1-143)||(6097537-6097675)
chr6 (1-199)||(25421239-25421432)
chr6 (54-199)||(6027232-6027373)
chr6 (1-199)||(26954328-26954527)
chr6 (9-192)||(3038952-3039137)
chr6 (93-199)||(17758044-17758149)
chr6 (93-199)||(21588952-21589057)
chr6 (93-199)||(21593685-21593790)
chr6 (1-70)||(16567132-16567201)
chr6 (93-199)||(2972981-2973086)
chr6 (93-199)||(26830165-26830270)
chr6 (91-199)||(5043646-5043753)
chr6 (54-196)||(13153899-13154038)
chr6 (1-70)||(16568969-16569038)
chr6 (54-196)||(34164842-34164981)
chr6 (54-196)||(34167064-34167203)
chr6 (93-199)||(17763011-17763116)
chr6 (93-199)||(3808750-3808856)
chr6 (1-66)||(33211362-33211427)
chr6 (54-196)||(33342150-33342289)
chr6 (93-199)||(603130-603235)
chr6 (93-199)||(22424868-22424974)
[»] chr1 (60 HSPs)
chr1 (1-199)||(20762598-20762798)
chr1 (1-199)||(40282311-40282503)
chr1 (1-199)||(9987136-9987327)
chr1 (1-199)||(20622279-20622472)
chr1 (1-196)||(21053892-21054081)
chr1 (1-199)||(9036351-9036542)
chr1 (1-199)||(3156792-3156991)
chr1 (1-191)||(51765321-51765515)
chr1 (1-199)||(28220268-28220468)
chr1 (1-199)||(44455086-44455286)
chr1 (9-199)||(50167217-50167409)
chr1 (1-199)||(3189257-3189456)
chr1 (1-199)||(3198074-3198273)
chr1 (1-199)||(3206913-3207112)
chr1 (1-192)||(196957-197150)
chr1 (1-192)||(834216-834409)
chr1 (1-192)||(3847170-3847363)
chr1 (1-199)||(8550829-8551029)
chr1 (1-199)||(28223463-28223663)
chr1 (1-199)||(49918275-49918476)
chr1 (1-199)||(1833448-1833648)
chr1 (1-199)||(31659164-31659364)
chr1 (1-199)||(37503599-37503796)
chr1 (9-199)||(28265596-28265788)
chr1 (3-199)||(50169252-50169450)
chr1 (54-199)||(44203617-44203758)
chr1 (67-191)||(13316402-13316521)
chr1 (1-191)||(23555315-23555507)
chr1 (1-199)||(37559910-37560111)
chr1 (1-199)||(10925149-10925352)
chr1 (93-199)||(19754516-19754621)
chr1 (93-199)||(47255382-47255487)
chr1 (9-199)||(4552679-4552871)
chr1 (1-199)||(13659378-13659578)
chr1 (1-70)||(15820233-15820302)
chr1 (93-199)||(11348719-11348824)
chr1 (93-199)||(13547131-13547236)
chr1 (93-199)||(13549042-13549147)
chr1 (1-199)||(30476488-30476690)
chr1 (93-199)||(31925749-31925854)
chr1 (93-199)||(37168318-37168424)
chr1 (1-70)||(13138147-13138216)
chr1 (93-199)||(19752707-19752812)
chr1 (93-199)||(42298017-42298122)
chr1 (93-199)||(7482272-7482378)
chr1 (112-197)||(45644398-45644481)
chr1 (9-199)||(46064852-46065044)
chr1 (93-199)||(193632-193737)
chr1 (93-199)||(29136268-29136373)
chr1 (1-49)||(13316513-13316560)
chr1 (93-197)||(22079337-22079441)
chr1 (93-192)||(37033121-37033220)
chr1 (93-199)||(47115192-47115298)
chr1 (127-199)||(16455677-16455747)
chr1 (3-70)||(40122371-40122438)
chr1 (1-70)||(928150-928220)
chr1 (93-199)||(34603597-34603703)
chr1 (93-192)||(15820328-15820426)
chr1 (1-70)||(45644528-45644597)
chr1 (93-144)||(37879006-37879058)
[»] scaffold1519 (1 HSPs)
scaffold1519 (1-191)||(843-1033)
[»] scaffold0016 (1 HSPs)
scaffold0016 (9-199)||(114537-114728)
[»] scaffold0491 (2 HSPs)
scaffold0491 (1-191)||(11211-11404)
scaffold0491 (1-191)||(8785-8978)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-191)||(434459-434651)
[»] scaffold0286 (1 HSPs)
scaffold0286 (23-191)||(11505-11675)
[»] scaffold0565 (1 HSPs)
scaffold0565 (54-199)||(2646-2787)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-199)||(20457-20657)
[»] scaffold0137 (1 HSPs)
scaffold0137 (54-196)||(6258-6396)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-199)||(149139-149339)
[»] scaffold0674 (1 HSPs)
scaffold0674 (54-191)||(3776-3909)
[»] scaffold0176 (1 HSPs)
scaffold0176 (93-199)||(18046-18150)
[»] scaffold0466 (1 HSPs)
scaffold0466 (93-199)||(7348-7453)
[»] scaffold0014 (1 HSPs)
scaffold0014 (93-169)||(80353-80430)
[»] scaffold0129 (1 HSPs)
scaffold0129 (9-65)||(19117-19173)


Alignment Details
Target: chr7 (Bit Score: 103; Significance: 2e-51; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 39731302 - 39731487
Alignment:
Q  1 tgattagag-ttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||      ||||| |||||||    
T  39731302 tgattagagcttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgg-----aaaaagggtagaaa 39731395  T
Q  100 ttagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||| |||||||||||||| | ||||||||||||||| | |||||||| ||||||||||||  |||||||||||||||||||||||    
T  39731396 ttagggttgttctttgtgaacttgtcagatctaatttcttgtaactcttttgtatctcttttgtaagaa--ctcattgatagtggattggagag 39731487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 14070075 - 14069875
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| || ||||| ||||||||||| |||||||||||||||||||||||||       ||||||||||||||    |||     
T  14070075 tgattagagttctcttgggttgggtaa-cattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa----aagg 14069981  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| | ||||||||||  ||||||||||||||||||||||    
T  14069980 gtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctc-tttgtaagaa--ctcattgatagtggattggaga 14069884  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  14069883 gatcaatct 14069875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 14380103 - 14379903
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| || ||||| ||||||||||| |||||||||||||||||||||||||       ||||||||||||||    |||     
T  14380103 tgattagagttctcttgggttgggtaa-cattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa----aagg 14380009  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| | ||||||||||  ||||||||||||||||||||||    
T  14380008 gtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctc-tttgtaagaa--ctcattgatagtggattggaga 14379912  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  14379911 gatcaatct 14379903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 35853841 - 35854032
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagag 93  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||    ||| |    
T  35853841 tgatttgagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa----aaggg 35853935  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| | ||||||||||  |||||||||||||||||||||||    
T  35853936 tagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctc-tttgtaagaa--ctcattgatagtggattggagag 35854032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 23554966 - 23555166
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    ||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||   ||||  |    
T  23554966 tgattagagttctcttgagttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaa---aaaatgg 23555061  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||| ||||||||||||   ||||||||||||||||| | |||||| ||  ||||||||||  |||||||||||||||||||||||    
T  23555062 tagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacacttttgta-cctctttgtaagaa--ctcattgatagtggattggagag 23555158  T
Q  192 aacaatct 199  Q
    | ||||||    
T  23555159 atcaatct 23555166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 20343831 - 20344023
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||   || || |||||||||||||||||||||||||||||||     || |||||||    
T  20343831 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtaaagagagaatcattgagtgtcttggtgagattgggaaa-----agggtagaaa 20343923  T
Q  100 ttagggtt-gttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagagaacaat 197  Q
    |||||||| |||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||   ||||||||||||||||||| |||||    
T  20343924 ttagggtttgttcattgtgaacttgtca-agctaatttcttgtaaccttttgtatcccttttgtaagaactc-atttgatagtggattggagagtacaat 20344021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 29990981 - 29991179
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||       |||||||||||||     ||||||      
T  29990981 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgg-----gaaaagga 29991074  T
Q  94 tagaaattagggttgtt-cttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||  |||||||||||||| |||||||||||||||| || |||||||| | ||| ||| ||  |||||||||||||||||||||||    
T  29991075 tagaaattagggttgttatttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctc-tttctaataa--ctcattgatagtggattggagag 29991171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 19502104 - 19502304
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtct-------tggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||       ||||||||||| |||   |||||      
T  19502104 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgagaatcattgagtgtcttgttcagtggtgagattgcgaa---aaaaggt 19502199  T
Q  94 tagaaattagggttg-ttcttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    ||||||||| ||||| || |||||| ||||||| ||||||||||||||||| | |||||||| | ||||||||||  |||||||||||||||||||||||    
T  19502200 tagaaattaaggttgttttttgtgagcttgtcaaagctaatttcttgtaactcttttgtatctc-tttgtaagaa--ctcattgatagtggattggagag 19502296  T
Q  192 aacaatct 199  Q
    | ||||||    
T  19502297 atcaatct 19502304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 24789775 - 24789959
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||  ||| |||||||||||||||||||||| |||||||||||     || ||| |||    
T  24789775 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtagagagaaaatcattgagtgtcttggtaagattgggaaa-----agggtaaaaa 24789867  T
Q  100 ttagggtt-gttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||| |||| |||||||||||||| |||||||||||||||||  |||||||||||||||||| ||||||  |||||||||||||||||||    
T  24789868 ttagggtttgttcattgtgaacttgtcaaagctaatttcttgtaacattttgtatcccttttgtaaaaactct--ttgatagtggattggagag 24789959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 191
Target Start/End: Complemental strand, 25767178 - 25767010
Alignment:
Q  23 gggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggt----gagattgggaaatgaaaagagtagaaattagggttgttctt-gtga 117  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |    |||||||| |||    ||| ||||||||||||||||||||| ||||    
T  25767178 gggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattgagattggaaaa----aagggtagaaattagggttgttctttgtga 25767083  T
Q  118 acttgtcatagctaatttcttgtaa--ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||| ||||||||||||||||  || |||||||| |||||| |||||  |||||||||||||||||||||||    
T  25767082 acttgtcaaagctaatttcttgtaaccccttttgtatctcttttg-aagaa--ctcattgatagtggattggagag 25767010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 41317668 - 41317476
Alignment:
Q  9 gttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagtagaaat 100  Q
    |||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||| |||||       ||||||||||||||    |   ||||||||    
T  41317668 gttctcttgggttggg-aaacattgtaaacaccttggatgagtgaaaatcattgagtctcttgttcattggtgagattgggaaa----attggtagaaat 41317574  T
Q  101 tagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatc 198  Q
    ||||||||||||| |||| ||||||| |||||||||||||||| |||||||||||||||| ||||||||||  ||||||||||||||||||||| |||||    
T  41317573 tagggttgttctttgtgagcttgtcaaagctaatttcttgtaatccatttgtatcccttt-gtaagaactc--attgatagtggattggagagatcaatc 41317477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 47674185 - 47673985
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||  |||||||| ||||||||||| |||||||||||||||||||||||||       ||||||||| ||||    | |     
T  47674185 tgattagagttctcttgggttgga-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgagaaa----atgg 47674091  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| ||||||||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  47674090 gtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 47673994  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  47673993 gatcaatct 47673985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 48491505 - 48491705
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| |||||| |||| |||||||||||||||||||||||||       ||||||||||||||    | |     
T  48491505 tgattagagttctcttgggttggg-aaacattgtaaacactttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa----atgg 48491599  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| ||||||||||   |||||||||||||||||| ||||||||| |||| | ||||||||  |||||||||||||||||||    
T  48491600 gtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gaaagaactc--attgatagtggattggaga 48491696  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  48491697 gatcaatct 48491705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 4178701 - 4178886
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||   ||||| |    
T  4178701 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaa---aaaag-g 4178795  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattg 186  Q
    |||||||||||||||||| |||||||||||  | |||||||||||||||| || |||||||| ||||   |||||  ||||||||||||||||||    
T  4178796 tagaaattagggttgttctttgtgaacttgggaaagctaatttcttgtaacccttttgtatctcttt--gaagaa--ctcattgatagtggattg 4178886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 43504390 - 43504204
Alignment:
Q  1 tgattagag-ttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    ||||||||| ||||||||| ||||| |||||| | ||||||||||  ||| ||||||||| ||||||||||||||||||||||||     || |||||||    
T  43504390 tgattagagcttctcttggcttggg-aaacatgggaaacaccttgaagagagaaaatcatcgagtgtcttggtgagattgggaaa-----agggtagaaa 43504297  T
Q  100 ttagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa--ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||| |||||||||||||| | ||||||||||||||  |  |||||||| ||||||||||||  ||||||||||||| |||||||||    
T  43504296 ttagggttgttcattgtgaacttgtcaaatctaatttcttgtaactctttttgtatctcttttgtaagaa--ctcattgatagtgaattggagag 43504204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 48408728 - 48408922
Alignment:
Q  1 tgattagagtt-ctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    ||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||    |||||     
T  48408728 tgattagagtttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattggga----aaaagg 48408822  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa--ccatttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
    ||||||||||  ||||||| |||| ||||||||| ||||||||||||||||  || |||||||| |||||| || ||  |||||||||||||||||||||    
T  48408823 gtagaaattaatgttgttctttgtaaacttgtcaaagctaatttcttgtaaccccttttgtatctcttttgaaataa--ctcattgatagtggattggag 48408920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 4586087 - 4586287
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacacctt-ggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||| |||||||||||||||       |||||||||||||||    ||| |     
T  4586087 tgattagagttctcttgggtt-gggaaacattgtaaacaccttgggtgagtgtaaatcattgagtgtcttgttcattggtgagattggga----aaatgg 4586181  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| ||||||||||||   ||||||||| |||||| |||||| |||| | ||||||||||  ||||||||||||||||||||||    
T  4586182 gtagaaattagggttgttctttgtgaacttgttgaagctaattttttgtaacccatttttatctc-tttgtaagaa--ctcattgatagtggattggaga 4586278  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  4586279 gatcaatct 4586287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 8153276 - 8153468
Alignment:
Q  9 gttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagtagaaat 100  Q
    |||||||||||||||| |||||||| |||||| |||| |||||||||||||||||||||||||       ||||||||||||||    | ||||||||||    
T  8153276 gttctcttgggttggg-aaacattgtaaacacattgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa----atgagtagaaat 8153370  T
Q  101 tagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatc 198  Q
    ||||||||||||| ||||  |||||| ||||||||||||||||| |||||||||| |||| |||| |||||  ||||||||||||||||||||| |||||    
T  8153371 tagggttgttctttgtgagattgtcaaagctaatttcttgtaactcatttgtatctcttt-gtaataactc--attgatagtggattggagagatcaatc 8153467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 3 - 199
Target Start/End: Original strand, 27347745 - 27347943
Alignment:
Q  3 attagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagt 94  Q
    |||||||||||||| ||||||| |||||||| |||||| |||| |||||||||||||||||||||||||       ||||||||||||||    | | ||    
T  27347745 attagagttctcttaggttggg-aaacattgtaaacacattgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa----atgggt 27347839  T
Q  95 agaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagaga 192  Q
    |||||||||| |||||||| ||||||||||   |||||||||||||||||| ||||||||| |||| ||||||||||  ||||||||||||||| |||||    
T  27347840 agaaattaggattgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattgcagaga 27347936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 3 - 199
Target Start/End: Complemental strand, 41649250 - 41649053
Alignment:
Q  3 attagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagt 94  Q
    |||||||||||||||||||||| |||||||| ||||||||||| | |||||||||||||||||||||||       |||||||||| |||    |   ||    
T  41649250 attagagttctcttgggttggg-aaacattgtaaacaccttgggtaagtgaaaatcattgagtgtcttgttcatttgtgagattggaaaa----attggt 41649156  T
Q  95 agaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagaga 192  Q
    |||||||||| |||||||| |||| |||||  ||||||||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||||||||    
T  41649155 agaaattaggtttgttctttgtgagcttgtt-tagctaatttcttgtaacccatttgtatcccttt-gtaagaactc--attgatagtggattggagaga 41649060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 25615789 - 25615979
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||||||||||||||||  |||||||| ||||||||||| |||| ||||||||||||||||||||   |||||||||||    | | |||||||    
T  25615789 tgattagagttctcttgggttgga-aaacattgtaaacaccttgggtgagagaaaatcattgagtgtcttg---agattgggaaa----atgggtagaaa 25615880  T
Q  100 ttagggttgttct-tgtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagagaacaat 197  Q
    ||||| ||||||| ||||  |||||   |||||||||||||||||| |||||||||  ||||||||||||||  |||||||||||||| |||||| ||||    
T  25615881 ttaggtttgttctatgtgcgcttgtttaagctaatttcttgtaacccatttgtatca-ttttgtaagaactc--attgatagtggattagagagatcaat 25615977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 38671464 - 38671271
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacacctt-ggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||||||||||||       ||||||||||||    ||| |     
T  38671464 tgattagagttctcttgggtt-gggaaacattgtaaacaccttgggtgagcgaaaatcattgagtgtcttgttcatttgtgagattggga----aaatgg 38671370  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| |||||| |||||   ||||||||| ||||||| |||||||||| | ||||||||||  |||||||||||||||||| |||    
T  38671369 gtagaaattagggttgttctttgtgagcttgtttaagctaatttattgtaacacatttgtatcac-tttgtaagaa--ctcattgatagtggattgaaga 38671273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 31733211 - 31733011
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||       ||||||||| || ||    ||| |     
T  31733211 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagactgaga----aaatgg 31733117  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| |||||| ||||    |||||||||||||||| ||||||||||| | ||||||||||  |||||||||| |||||||||||    
T  31733116 gtagaaattagggttgttctttgtgagcttggtgaagctaatttcttgtaacccatttgtatctc-tttgtaagaa--ctcattgatactggattggaga 31733020  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  31733019 gatcaatct 31733011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 47676378 - 47676178
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacacctt-ggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| ||||||||       |||||||||||| ||    ||| |     
T  47676378 tgattagagttctcttgggtt-gggaaacattgtaaacaccttgggtgagtgaaaatcaatgagtgtcttgttcattggtgagattgaga----aaatgg 47676284  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| ||||||| ||||   |||||||||||||||| ||||||||||| | ||||||||||  |||| |||||||||| ||||||    
T  47676283 gtagaaattagggttgttctttgtgaatttgttgaagctaatttcttgtaacccatttgtatctc-tttgtaagaa--ctcaatgatagtggaatggaga 47676187  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  47676186 gatcaatct 47676178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 18126570 - 18126760
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||| ||||||||| |||||||| ||||| ||||| ||||||||||||||||||||| |||       |||||||||| |||    | |     
T  18126570 tgattagagttctcatgggttggg-aaacattgtaaacaacttgggtgagtgaaaatcattgagtgttttgttcattggtgagattggaaaa----atgt 18126664  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
    ||||||||||||||||||| ||||||||||||   |||||||||||||||| ||||||||||| | ||||||||||  |||||||||||||||||||||    
T  18126665 gtagaaattagggttgttctttgtgaacttgttcaagctaatttcttgtaacccatttgtatctc-tttgtaagaa--ctcattgatagtggattggag 18126760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 1113583 - 1113783
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||||       ||||||||| ||    ||| |     
T  1113583 tgattagagttctcttgggttggg-aaacattgtaaacaacttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgaga----aaatgg 1113677  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
     |||||||||||||||||| |||||| |||||   |||||||||||| ||| ||||||||||| | ||||||||||  |||||||||||| |||||||||    
T  1113678 atagaaattagggttgttctttgtgagcttgttgaagctaatttcttataacccatttgtatctc-tttgtaagaa--ctcattgatagtagattggaga 1113774  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  1113775 gatcaatct 1113783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 26417242 - 26417442
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttg-gtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||| ||||| |||||||| |||||||||| | | ||||||||||||||||||||||       ||||||||||||||    | |     
T  26417242 tgattagagttctcttggattggg-aaacattgtaaacaccttgagcgggtgaaaatcattgagtgtcttgttcattggtgagattgggaaa----atgg 26417336  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   || ||||||||||||||| ||||||||| |||| ||||||||||   ||||||||||||||||||    
T  26417337 gtagaaattagggttgttctttgtgagcttgttgaagataatttcttgtaacccatttgtatctcttt-gtaagaactcg--ttgatagtggattggaga 26417433  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  26417434 gatcaatct 26417442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 43864170 - 43864370
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||       ||||||||||||| |    ||  |     
T  43864170 tgattaaagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaa----aagtgg 43864264  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| ||||||||||||   |||||||||| ||||| ||||||||||| | ||||||| ||  || |||||||||||||||||||    
T  43864265 gtagaaattagggttgttctttgtgaacttgttgaagctaatttcctgtaacccatttgtatctc-tttgtaaaaa--ctaattgatagtggattggaga 43864361  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  43864362 gatcaatct 43864370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 6592523 - 6592385
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgta 151  Q
    |||||||||||||||||||||||||||||||||      ||||||||||||||| |||| | |||||||||||| ||||||||||||||||||  |||||    
T  6592523 aatcattgagtgtcttggtgagattgggaaatgg-----gtagaaattagggtttgttcatagtgaacttgtca-agctaatttcttgtaacctcttgta 6592430  T
Q  152 tcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    |||||||||| ||||||||   ||||||||||||||||||| ||||    
T  6592429 tcccttttgtaaagaactc-atttgatagtggattggagagtacaa 6592385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24515002 - 24514934
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg 70  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  24515002 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttg 24514934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 30024974 - 30024775
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||| |||||   |||| ||| ||||||||||| |||||||||||||||||||||||||       ||||||||| ||||    | |     
T  30024974 tgattagagttctcttaggttgaa-aaacgttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgagaaa----atgg 30024880  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| |||||| |||||   |||||||||||||||||| ||||||||| |||| |||||||||||  ||||||||||||||||||    
T  30024879 gtagaaattagggttgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactct--ttgatagtggattggaga 30024783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 54 - 199
Target Start/End: Complemental strand, 18388943 - 18388802
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgta 151  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||||||||| ||||||||||||||||||  |||||    
T  18388943 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacttgtca-agctaatttcttgtaacctcttgta 18388850  T
Q  152 tcccttttgt-aagaactctcattgatagtggattggagagaacaatct 199  Q
    |||||||||| ||||||||   ||||||||||||||||||| |||||||    
T  18388849 tcccttttgtaaagaactc-atttgatagtggattggagagtacaatct 18388802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 54 - 199
Target Start/End: Complemental strand, 18392379 - 18392238
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgta 151  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||||||||| ||||||||||||||||||  |||||    
T  18392379 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacttgtca-agctaatttcttgtaacctcttgta 18392286  T
Q  152 tcccttttgt-aagaactctcattgatagtggattggagagaacaatct 199  Q
    |||||||||| ||||||||   ||||||||||||||||||| |||||||    
T  18392285 tcccttttgtaaagaactc-atttgatagtggattggagagtacaatct 18392238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 48489357 - 48489557
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacacctt-ggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| | ||||       |||||||||||||||    ||| |     
T  48489357 tgattagagttctcttgggtt-gggaaacattgtaaacaccttgggtgagtgaaaatcattaaatgtcttgttcattggtgagattggga----aaatgg 48489451  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| |||  |||||||   |||||||||||||||| ||||||||||| | |||| || ||  |||||| |||||||||||||||    
T  48489452 gtagaaattagggttgttctttgaaaacttgttgaagctaatttcttgtaacccatttgtatctc-tttgcaataa--ctcattcatagtggattggaga 48489548  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  48489549 gatcaatct 48489557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 6594741 - 6594603
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgta 151  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||||||||| ||||||||||||||||||  |||||    
T  6594741 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacttgtca-agctaatttcttgtaacctcttgta 6594648  T
Q  152 tcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    |||||||||| ||||||||   ||||||||||||||||||| ||||    
T  6594647 tcccttttgtaaagaactc-atttgatagtggattggagagtacaa 6594603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 496225 - 496025
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||| ||||| |||||||| ||| ||||||| ||||||||||||||| ||||| |||       ||||||||||||||    | |     
T  496225 tgattagagttctcttggattggg-aaacattgtaaaaaccttgggtgagtgaaaatcatttagtgttttgttaatttgtgagattgggaaa----atgg 496131  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||||| |||||| |||| |||||   ||||||||||||| |||| ||||||||| ||||  |||||||||  |||||||||||||||||||    
T  496130 gtagaaattagggtagttctttgtgagcttgttgaagctaatttcttgcaacccatttgtatctcttta-taagaactc--attgatagtggattggaga 496034  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  496033 gatcaatct 496025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 32060559 - 32060364
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||   || || ||||||||||||||||||||||||||||||| |      |||||||    
T  32060559 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtaaagagagaatcattgagtgtcttggtgagattgggaaaggg-----gtagaaa 32060467  T
Q  100 ttagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgtatccc--ttttgtaa-gaactctcattgatagtggattggagagaac 194  Q
    |||||||| |||| | |||||||||||| ||||||||||||||||||  |||||||||  |||||||| ||||||   ||||||||||||||||||| ||    
T  32060466 ttagggtttgttcatagtgaacttgtca-agctaatttcttgtaacctcttgtatcccctttttgtaaagaactcat-ttgatagtggattggagagtac 32060369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 34310863 - 34310758
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| ||||| ||||   ||||||||||||||||| ||||||||||  ||||||||||||||  |||||||||||||||||||    
T  34310863 gtagaaattagggttgttctttgtgaaattgttgaagctaatttcttgtaacacatttgtatct-ttttgtaagaactc--attgatagtggattggaga 34310767  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  34310766 gatcaatct 34310758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 4508874 - 4508748
Alignment:
Q  68 ttggtgagattgggaaatgaaaagagtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaaga 165  Q
    |||||||||||||||||    | ||||||||||||||||||||||| |||| ||| |   |||||||||||||||||| ||||||||| |||| ||||||    
T  4508874 ttggtgagattgggaaa----atgagtagaaattagggttgttctttgtgagcttattgaagctaatttcttgtaacccatttgtatctcttt-gtaaga 4508780  T
Q  166 actctcattgatagtggattggagagaacaatct 199  Q
    ||||  ||||| ||||||||||||||| ||||||    
T  4508779 actc--attgagagtggattggagagatcaatct 4508748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 22269994 - 22270099
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| |||||||||   |||||||||||||||||||    
T  22269994 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactg--attgatagtggattggaga 22270090  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  22270091 gatcaatct 22270099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 93 - 190
Target Start/End: Original strand, 29608758 - 29608854
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   ||||||||||||||||| |||||||||| |||| ||||||||||  |||||||||||||||||||    
T  29608758 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactc--attgatagtggattggaga 29608854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 192
Target Start/End: Complemental strand, 31105612 - 31105442
Alignment:
Q  25 gaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagtagaaattagggttgttc-ttgt 115  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||       ||||||||||||    ||| | |||||||||||  || ||| ||||    
T  31105612 gaaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattggga----aaatgggtagaaattagattttttctttgt 31105517  T
Q  116 gaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagaga 192  Q
    || |||||   |||||||||||||||| |||||||||| | |||||||||||  ||||||||| ||||||||||||||    
T  31105516 gagcttgttgaagctaatttcttgtaacccatttgtat-ctttttgtaagaa--ctcattgatggtggattggagaga 31105442  T

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Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2761544 - 2761475
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacacctt-ggtgagtgaaaatcattgagtgtcttg 70  Q
    ||||||||||||||||||||| ||||||||||| |||||| || |||||||||||||||| ||||||||||    
T  2761544 tgattagagttctcttgggtt-gggaaacattgtaaacacattgggtgagtgaaaatcatcgagtgtcttg 2761475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 4538782 - 4538713
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    |||||||| ||||||||||||||| ||| |||| ||||||||||| |||||||||||||||||||||||||    
T  4538782 tgattagaattctcttgggttgggaaaa-attgtaaacaccttgggtgagtgaaaatcattgagtgtcttg 4538713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 2361119 - 2361014
Alignment:
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| |||||| |||||   ||||||||||||||||| |||||||||| | ||||||||||  ||||||||||||||||| ||||    
T  2361119 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctc-tttgtaagaa--ctcattgatagtggatttgaga 2361023  T
Q  191 gaacaatct 199  Q
     | ||||||    
T  2361022 tatcaatct 2361014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 6431992 - 6432097
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||| |||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| ||||||||||   ||||||||||||||||||    
T  6431992 gtagaaattaggattgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcg--ttgatagtggattggaga 6432088  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  6432089 gatcaatct 6432097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 48599481 - 48599376
Alignment:
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| |||||| |||||   ||||||||||||||||| |||||||||| | |||| ||||   ||||||||||||||||||||||    
T  48599481 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctc-tttggaaga--gctcattgatagtggattggaga 48599385  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  48599384 gatcaatct 48599376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 199
Target Start/End: Complemental strand, 2759339 - 2759239
Alignment:
Q  98 aattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagagaaca 195  Q
    |||||||||||||||| ||||||||||   ||||||||||||||||| ||||| |||| |||| ||||||||||  ||||||||||||||||||| | ||    
T  2759339 aattagggttgttctttgtgaacttgttgaagctaatttcttgtaactcatttatatctcttt-gtaagaactc--attgatagtggattggagatatca 2759243  T
Q  196 atct 199  Q
    ||||    
T  2759242 atct 2759239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 12098093 - 12097944
Alignment:
Q  9 gttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagagtagaaat 100  Q
    |||||||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||       ||||| |||||||||    ||| | ||||||||    
T  12098093 gttctcttgggttggg-aaacattgtaaacatcttgggtgagtgaaaatcattgagtgtcttgttcattggttagattggga----aaatgggtagaaat 12097999  T
Q  101 tagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatc 153  Q
    ||||||||||| |||||| |||||   || ||||||||||||| |||||||||||    
T  12097998 tagggttgttcattgtgagcttgttgaagttaatttcttgtaacccatttgtatc 12097944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 142
Target Start/End: Complemental strand, 1562187 - 1562103
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattaggg-ttgttc-ttgtgaacttgtcatagctaatttcttgtaa 142  Q
    |||||||||||||||||||||||||||||||     || ||||||||||||| |||||| | |||||||||||| ||||||||||||||||    
T  1562187 aatcattgagtgtcttggtgagattgggaaa-----agggtagaaattagggtttgttcatagtgaacttgtca-agctaatttcttgtaa 1562103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 24526131 - 24526070
Alignment:
Q  9 gttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    |||||||| ||||||| |||||||| ||||||||||| |||||||||||||||||||||||||    
T  24526131 gttctcttaggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttg 24526070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 32358166 - 32358096
Alignment:
Q  127 agctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatct 199  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||  ||||||||||||||||||||| ||||||    
T  32358166 agctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggagagatcaatct 32358096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 2390303 - 2390408
Alignment:
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| |||||| |||||   |||||||||||||||| ||||||||||| | ||||||| ||  |||||  |||||||||||||||    
T  2390303 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctc-tttgtaataa--ctcatatatagtggattggaga 2390399  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  2390400 gatcaatct 2390408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 36146643 - 36146450
Alignment:
Q  9 gttctcttgggttggggaaacatt-gcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||||||||| ||||||| | ||||||||||| ||||||||||||||||||||||       |||||||||||||||    ||| | |||||||    
T  36146643 gttctcttgggttggg-aaacatttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggga----aaatgggtagaaa 36146549  T
Q  100 ttag-ggttgtt-cttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagagaacaa 196  Q
    |||| | |||||  |||||| |||||   |||||||||| ||||| ||||||||||| | ||||||||||  ||||||||||||||||| |||||| |||    
T  36146548 ttagagtttgttatttgtgagcttgttgaagctaatttc-tgtaacccatttgtatctc-tttgtaagaa--ctcattgatagtggatttgagagatcaa 36146453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 8359464 - 8359358
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacca--tttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
    ||||||||||||||| ||||| |||| |||||   | ||||||||||||||||   |||||||| |||| ||||||||||  ||||||||||||||||||    
T  8359464 gtagaaattagggtttttctttgtgagcttgtttaaactaatttcttgtaacccattttgtatctcttt-gtaagaactc--attgatagtggattggag 8359368  T
Q  190 agaacaatct 199  Q
    ||| ||||||    
T  8359367 agatcaatct 8359358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 6360064 - 6359994
Alignment:
Q  127 agctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatct 199  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||  ||||||||| ||||||||||| ||||||    
T  6360064 agctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagttgattggagagatcaatct 6359994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 3259016 - 3259121
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||| ||||||||||||| |||| |||||   ||||||||| ||||||| |||||||||| |||| |||| ||| |  |||||||||||||||||||    
T  3259016 gtagaaactagggttgttctttgtgagcttgtttaagctaatttattgtaactcatttgtatctcttt-gtaaaaaccc--attgatagtggattggaga 3259112  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  3259113 gatcaatct 3259121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 199
Target Start/End: Complemental strand, 23565171 - 23565103
Alignment:
Q  129 ctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatct 199  Q
    ||||||||||||||| | |||||||| |||| ||||||||||  ||||||||||||||||||||| ||||||    
T  23565171 ctaatttcttgtaactcttttgtatctcttt-gtaagaactc--attgatagtggattggagagatcaatct 23565103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 1560757 - 1560708
Alignment:
Q  149 gtatcccttttgtaagaactctcattgatagtggattggagagaacaatct 199  Q
    |||||||||||||||||||||   ||||||||||||||||||| |||||||    
T  1560757 gtatcccttttgtaagaactcat-ttgatagtggattggagagtacaatct 1560708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 24525596 - 24525544
Alignment:
Q  144 catttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatct 199  Q
    |||||||||| |||| ||||||||||  ||||||||||||||||||||| ||||||    
T  24525596 catttgtatctcttt-gtaagaactc--attgatagtggattggagagatcaatct 24525544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 8e-51; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 13992528 - 13992343
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||   ||||| |||||||    
T  13992528 tgattagagtctctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaa---aaaagggtagaaa 13992433  T
Q  100 ttagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||| |||||||||||||| | ||||||||||||||| | |||||||  || |||||||||  |||||||||||||||||||||||    
T  13992432 ttagggttgttctttgtgaacttgtcaaatctaatttcttgtaactcttttgtat--ctcttgtaagaa--ctcattgatagtggattggagag 13992343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 56178878 - 56178679
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||    ||||| |    
T  56178878 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattggga----aaaaggg 56178784  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||| ||||||||||||   |||||||||||||||| || |||||||| | ||||||||||  |||||||||||||||||||||||    
T  56178783 tagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatctc-tttgtaagaa--ctcattgatagtggattggagag 56178687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 30000047 - 29999848
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagag 93  Q
    ||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| ||||||||||||       ||||||||||||||     || |    
T  30000047 tgattagagttctcttgggtttgg-aaacattgtaaacaccttggtgagtgaaaatcgttgagtgtcttgttcattggtgagattgggaaa-----aggg 29999954  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||||| |||||| ||||| ||||||||||||||||| | ||||||||  ||||||||||||||  ||||||||||||||||||||    
T  29999953 tagaaattagggttgttctttgtgaacatgtcaaagctaatttcttgtaactcttttgtatcttttttgtaagaactc--attgatagtggattggagag 29999856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 52095604 - 52095404
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||       ||||||||||||||    | |     
T  52095604 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa----atgg 52095510  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| | |||||||||| |||  ||||||||||||||||||    
T  52095509 gtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctc-tttgtaagaaatct--ttgatagtggattggaga 52095413  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  52095412 gatcaatct 52095404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 9927699 - 9927500
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtctt-------ggtgagattgggaaatgaaaagag 93  Q
    |||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||       |||||||||||||||    | | |    
T  9927699 tgattaaagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcactgagtgtcttattcattggtgagattgggaaa----atggg 9927605  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||||| ||||||||||   |||||||||||||||||| ||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  9927604 tagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggagag 9927508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 37740552 - 37740751
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||       ||||||||||| |||    ||||| |    
T  37740552 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcactgagtgtcttgttcattggtgagatttgga----aaaaggg 37740646  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    || ||||||||||||||| ||||||||||||   |||||||||||||||| ||||||||||| | ||||||||||  |||||||||||||||||||||||    
T  37740647 tataaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctc-tttgtaagaa--ctcattgatagtggattggagag 37740743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 31495552 - 31495366
Alignment:
Q  1 tgattagag-ttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    ||||||||| ||||||||||||||| |||||| | ||||||||||  ||| ||||||||||||||||||||||||||||||||||     || |||||||    
T  31495552 tgattagagcttctcttgggttggg-aaacatgggaaacaccttgaagagagaaaatcattgagtgtcttggtgagattgggaaa-----agggtagaaa 31495459  T
Q  100 ttagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa--ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    ||||| |||||| |||||||||||||| | ||||||||||||||  |  |||||||| ||||||||||||  |||||||||||| ||||||||||    
T  31495458 ttaggattgttcattgtgaacttgtcaaatctaatttcttgtaactctttttgtatctcttttgtaagaa--ctcattgatagttgattggagag 31495366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 48142968 - 48143169
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||       |||||||||||||||||  |||||     
T  48142968 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa--aaaag- 48143063  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| ||||||||||||   |||||||||||||||| || |||||||| | ||  ||||||  ||||||||||||||||||||||    
T  48143064 gtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatctc-ttcataagaa--ctcattgatagtggattggaga 48143160  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  48143161 gatcaatct 48143169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 5429605 - 5429805
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||       |||||||||||||||    ||| ||    
T  5429605 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggga----aaatga 5429699  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||| ||||| |||| |||||   |||||||||||||||| |||||||||| |  ||||||||||  ||||||||||||||||||||||    
T  5429700 gtagaaattagggttattcttcgtgagcttgttgaagctaatttcttgtaacccatttgtat-ctatttgtaagaa--ctcattgatagtggattggaga 5429796  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  5429797 gatcaatct 5429805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 12739792 - 12739592
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacacctt-ggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||| |||||||| ||||||||||||||||||       ||||||||||||||    | |     
T  12739792 tgattagagttctcttgggttggg-aaacattgtaaacaccttaggtgagtggaaatcattgagtgtcttgttcattggtgagattgggaaa----atgg 12739698  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
     |||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||| |  |||||| |||  ||||||||||||||||||||||    
T  12739697 atagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtat-ctatttgtatgaa--ctcattgatagtggattggaga 12739601  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  12739600 gatcaatct 12739592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 12747998 - 12747798
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacacctt-ggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||| |||||||| ||||||||||||||||||       ||||||||||||||    | |     
T  12747998 tgattagagttctcttgggttggg-aaacattgtaaacaccttaggtgagtggaaatcattgagtgtcttgttcattggtgagattgggaaa----atgg 12747904  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
     |||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||| |  |||||| |||  ||||||||||||||||||||||    
T  12747903 atagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtat-ctatttgtatgaa--ctcattgatagtggattggaga 12747807  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  12747806 gatcaatct 12747798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 34570656 - 34570456
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||||       ||||||||||||||   | ||     
T  34570656 tgattagagttctcttgggttggg-aaacattgaaaacatcttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa---atag- 34570562  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| ||||||||||   |||||||||||||||||| | ||||||| |||| ||||||||||  |||||||||||||||||||    
T  34570561 gtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccaattgtatctcttt-gtaagaactc--attgatagtggattggaga 34570465  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  34570464 gatcaatct 34570456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 12745678 - 12745478
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttggtgagattgg-gaaat---gaaaa-gagt 94  Q
    |||||||||||||||||| ||||| ||||| || ||||||||||| ||||||||||||||||||||||||| | |  |||| || ||   ||||| | ||    
T  12745678 tgattagagttctcttggtttggg-aaacaatgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttca--ttggcgagattaggaaaatgggt 12745582  T
Q  95 agaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagaga 192  Q
    ||||||||||||||||||| |||||||||||| | |||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||||    
T  12745581 agaaattagggttgttctttgtgaacttgtcaaaactaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggagaga 12745485  T
Q  193 acaatct 199  Q
     ||||||    
T  12745484 tcaatct 12745478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 5370328 - 5370125
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagag 93  Q
    |||||| |||||||||||| |||| |||||||| |||||| |||||||||||||||||||||||||||||       |||||||||| |||  |||||||    
T  5370328 tgattatagttctcttgggctggg-aaacattgtaaacactttggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaaaa--aaaagag 5370232  T
Q  94 -tagaaattagggttgttc-ttgtgaacttgtc-atagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
     |||||||||||||||||| ||||||||||||| | |||||||||||||||| || |||||||| | ||||||||||  ||||||||||||||| | |||    
T  5370231 gtagaaattagggttgttctttgtgaacttgtcaaaagctaatttcttgtaacccttttgtatctc-tttgtaagaa--ctcattgatagtggactagag 5370135  T
Q  190 agaacaatct 199  Q
    ||| ||||||    
T  5370134 agatcaatct 5370125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 199
Target Start/End: Original strand, 8393380 - 8393520
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgta 151  Q
    |||||||||||||||||||||||||||||||     || ||||||||||||||| |||| | |||||| ||||| |||||||||||||||||| ||||||    
T  8393380 aatcattgagtgtcttggtgagattgggaaa-----agggtagaaattagggtttgttcatagtgaacatgtca-agctaatttcttgtaaccttttgta 8393473  T
Q  152 tcccttttgtaagaactctcattgatagtggattggagagaacaatct 199  Q
    ||||||||||||||||||   ||||||||||||||||||| |||||||    
T  8393474 tcccttttgtaagaactc-atttgatagtggattggagagtacaatct 8393520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 199
Target Start/End: Original strand, 8395589 - 8395729
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgta 151  Q
    |||||||||||||||||||||||||||||||     || ||||||||||||||| |||| | |||||| ||||| |||||||||||||||||| ||||||    
T  8395589 aatcattgagtgtcttggtgagattgggaaa-----agggtagaaattagggtttgttcatagtgaacatgtca-agctaatttcttgtaaccttttgta 8395682  T
Q  152 tcccttttgtaagaactctcattgatagtggattggagagaacaatct 199  Q
    ||||||||||||||||||   ||||||||||||||||||| |||||||    
T  8395683 tcccttttgtaagaactc-atttgatagtggattggagagtacaatct 8395729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 54200148 - 54199955
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| |||||| |||| ||||||||||||||||||||||       |||||||||||||||    ||| |     
T  54200148 tgattagagttctcttgggttggg-aaacattgtaaacacattgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggga----aaatgg 54200054  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| ||||||||||||   |||||||||||||||| ||||||||||| | ||||||||||  ||||||||||||| ||| ||||    
T  54200053 gtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctc-tttgtaagaa--ctcattgatagtgaattagaga 54199957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 36994450 - 36994650
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||  ||||  |||||||| ||||||||||| |||||||||||||||||||||||||       ||||||||||||||    | |     
T  36994450 tgattagagttctcttgatttggc-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa----atgg 36994544  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||| |||||||||| |||| |||||   |||||||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||||||    
T  36994545 gtagaaattaaggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcccttt-gtaagaactc--attgatagtggattggaga 36994641  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  36994642 gatcaatct 36994650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 47038651 - 47038453
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||  ||||||||||| ||||||||||||||||||||||       ||||||||||||| ||||     |     
T  47038651 tgattagagttctcttgggttggg-aaacattataaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaaaat-----gg 47038558  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    ||||||||||||||||||| |||||| |||||   |||||||||||||||| ||||||||| |  |||||||| |  |||||||||||||||||||||||    
T  47038557 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaatcatttgtat-ctgtttgtaagga--ctcattgatagtggattggagag 47038461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 26175878 - 26175678
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||| |||||| |||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||       ||||||||||||||    | |     
T  26175878 tgattaaagttctgttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa----atgg 26175784  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    | ||||||||||||||||||| |||| |||||   | |||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  26175783 ggagaaattagggttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 26175687  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  26175686 gatcaatct 26175678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 52082899 - 52082715
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacacctt-ggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||| ||||       |||||||||||||||    ||| |     
T  52082899 tgattagagttctcttgggtt-gggaaacattgtaaacaccttgggtgagtgaaaatcattgactgtcttgttcattggtgagattggga----aaatgg 52082805  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtgga 183  Q
    ||||||| ||||||||||| |||||||||||||| | |||||||||||||| ||||||||||| | |||||||||| |||  |||||||||||    
T  52082804 gtagaaactagggttgttctttgtgaacttgtcaaaactaatttcttgtaacccatttgtatctc-tttgtaagaaatct--ttgatagtgga 52082715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 12744072 - 12743967
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| | ||||||||||  ||||||||||||||||||||||    
T  12744072 gtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctc-tttgtaagaa--ctcattgatagtggattggaga 12743976  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  12743975 gatcaatct 12743967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 12744194 - 12744089
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| | ||||||||||  ||||||||||||||||||||||    
T  12744194 gtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctc-tttgtaagaa--ctcattgatagtggattggaga 12744098  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  12744097 gatcaatct 12744089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 12745461 - 12745356
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| | ||||||||||  ||||||||||||||||||||||    
T  12745461 gtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctc-tttgtaagaa--ctcattgatagtggattggaga 12745365  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  12745364 gatcaatct 12745356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 5871746 - 5871946
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||       ||||||||||||| |    ||| |     
T  5871746 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaa----aaatgg 5871840  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||| |||||| |||||| |||||   ||| |||||||||||| |||||| |||| | |||| |||||||||  ||||||||||||| ||||    
T  5871841 gtagaaattaggtttgttctttgtgagcttgtttaagcaaatttcttgtaacccatttttatcac-tttgcaagaactct--ttgatagtggattagaga 5871937  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  5871938 gatcaatct 5871946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 7122616 - 7122809
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||   || || ||||||||||||||||||||||||||||||| |      |||||||    
T  7122616 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtaaagagagaatcattgagtgtcttggtgagattgggaaaggg-----gtagaaa 7122708  T
Q  100 ttagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    |||||||| |||| | |||||||||||| | ||||||||||||||||  |||||| |||||||| ||||||||   ||||||||||||||||||| ||||    
T  7122709 ttagggtttgttcatagtgaacttgtcaaa-ctaatttcttgtaacctcttgtattccttttgtaaagaactc-atttgatagtggattggagagtacaa 7122806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 7124835 - 7125028
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||   || || ||||||||||||||||||||||||||||||| |      |||||||    
T  7124835 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtaaagagagaatcattgagtgtcttggtgagattgggaaaggg-----gtagaaa 7124927  T
Q  100 ttagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    |||||||| |||| | |||||||||||| | ||||||||||||||||  |||||| |||||||| ||||||||   ||||||||||||||||||| ||||    
T  7124928 ttagggtttgttcatagtgaacttgtcaaa-ctaatttcttgtaacctcttgtattccttttgtaaagaactc-atttgatagtggattggagagtacaa 7125025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 24 - 199
Target Start/End: Complemental strand, 48893862 - 48893680
Alignment:
Q  24 ggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagtagaaattagggttgttc---- 111  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||       ||||||||| ||||    | | |||||||||||||||||||        
T  48893862 ggaaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgagaaa----atgggtagaaattagggttgttcattg 48893767  T
Q  112 -ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatct 199  Q
     |||||| |||||   ||||||||||||||||| |||||||||| |||| |||||||||||  |||||||||||||||||||| ||||||    
T  48893766 tttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactct--ttgatagtggattggagagatcaatct 48893680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 13009673 - 13009604
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||    
T  13009673 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttg 13009604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 36463623 - 36463431
Alignment:
Q  9 gttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagtagaaat 100  Q
    ||||||||| |||||| |||||||| ||||||||||| ||||||||| |||||||||||||||       ||||||||||||||    | |  |||||||    
T  36463623 gttctcttgagttggg-aaacattgtaaacaccttgggtgagtgaaattcattgagtgtcttgttcattggtgagattgggaaa----atggatagaaat 36463529  T
Q  101 tagggttgttc-ttgtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatc 198  Q
    ||||| ||||| |||||| |||||   |||||||||||||||||| ||||||||| |||| |||||||||||  |||| ||||||||||||||| |||||    
T  36463528 tagggctgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactct--ttgacagtggattggagagatcaatc 36463432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 6655977 - 6656082
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||| |||||||||| ||||||||||   ||||||||||||||||| |||||||||| |||| ||||||||||  |||||||||||||||||||    
T  6655977 gtagaaattaaggttgttctttgtgaacttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactc--attgatagtggattggaga 6656073  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  6656074 gatcaatct 6656082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 26364257 - 26364362
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| ||||||||||   ||||||||||||||||| |||||||||| |||| ||||||||||  ||| |||||||||||||||    
T  26364257 gtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactc--attaatagtggattggaga 26364353  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  26364354 gatcaatct 26364362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 24969037 - 24969231
Alignment:
Q  1 tgattagagttctcttgggttggggaaaca-ttgcaaacacctt-ggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaag 91  Q
    ||||||||||||||||||||| |||||||| ||| ||||||||| |||||||||||||||||||| |||       ||||||||||||| |    ||| |    
T  24969037 tgattagagttctcttgggtt-gggaaacatttgtaaacaccttgggtgagtgaaaatcattgagagtcttgttctttggtgagattggaa----aaatg 24969131  T
Q  92 agtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
     |||||||||||  |||||| |||||| |||||   ||||||||||||||||| |||||||||| | ||||||||||  || ||||||||||||||||||    
T  24969132 ggtagaaattagatttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctc-tttgtaagaa--ctaattgatagtggattggag 24969228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 52467597 - 52467396
Alignment:
Q  1 tgattagagttctcttgggttggggaaacatt-gcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaag 91  Q
    ||||||| |||||||||||||||| ||||||| | ||||||||||| |||||||||||||||||||||||||       ||||| ||||||    ||| |    
T  52467597 tgattagggttctcttgggttggg-aaacatttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgaggttggga----aaatg 52467503  T
Q  92 agtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
     |||||||||||| |||||| |||||| |||||   ||||||| |||||||| ||||||||||| | ||||||| |||| |  |||||||||||||||||    
T  52467502 ggtagaaattaggtttgttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatcac-tttgtaataacttt--ttgatagtggattggag 52467406  T
Q  190 agaacaatct 199  Q
    ||| ||||||    
T  52467405 agatcaatct 52467396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 4587892 - 4588085
Alignment:
Q  9 gttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagagtagaaat 100  Q
    |||||| ||||||||| |||||||| ||||||||||| ||||||||||||||||||||||       ||||||| |||||||||   |||| ||||||||    
T  4587892 gttctcatgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcatgttcattggtgaaattgggaaa---aaag-gtagaaat 4587986  T
Q  101 tagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccattt-gtatcccttttgtaagaactctcattgatagtggattggagagaacaat 197  Q
    || | || |||||| || | |||||   |||||||||||||||||| ||| ||||| |||| ||||||||||  ||||||||||||||||||||||||||    
T  4587987 taagatttgttctttgtaagcttgttgaagctaatttcttgtaacccttttgtatctcttt-gtaagaactc--attgatagtggattggagagaacaat 4588083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 91 - 199
Target Start/End: Complemental strand, 50673995 - 50673889
Alignment:
Q  91 gagtagaaattagggttgttcttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
    |||||||||||||| ||||  |||||| |||||   ||||||||||||||||| |||||||||| |||| ||||||||||  ||||||||||||||||||    
T  50673995 gagtagaaattaggattgtctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactc--attgatagtggattggag 50673899  T
Q  190 agaacaatct 199  Q
    ||| ||||||    
T  50673898 agatcaatct 50673889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 8665429 - 8665534
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| | || |||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  8665429 gtagaaattagggttgttctttgagagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 8665525  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  8665526 gatcaatct 8665534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 27417112 - 27417007
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| |||| |||||  |||||||||||||||||||    
T  27417112 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaaaaactc--attgatagtggattggaga 27417016  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  27417015 gatcaatct 27417007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 40632466 - 40632571
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||| ||||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  40632466 gtagaaattagagttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctcttt-gtaagaactc--attgatagtggattggaga 40632562  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  40632563 gatcaatct 40632571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 46147538 - 46147433
Alignment:
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| |||||| |||||   ||||||||||||||||| |||||||||| |||| |||||||||||  ||||||||||||||||||    
T  46147538 gtagaaattagggttgttcattgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactct--ttgatagtggattggaga 46147442  T
Q  191 gaacaatct 199  Q
     | ||||||    
T  46147441 catcaatct 46147433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 41964436 - 41964542
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacca--tttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
    ||||||||||||||||||||| |||| |||||   ||||||||| ||||||||   ||||||||||||| ||||||||||  ||||||||||||||||||    
T  41964436 gtagaaattagggttgttctttgtgagcttgtttaagctaatttattgtaacccattttgtatcccttt-gtaagaactc--attgatagtggattggag 41964532  T
Q  190 agaacaatct 199  Q
    ||| ||||||    
T  41964533 agatcaatct 41964542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 46703500 - 46703627
Alignment:
Q  68 ttggtgagattgggaaatgaaaagagtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaacc--atttgtatcccttttgtaag 164  Q
    |||||||||||||||||    | ||||||||||||||||||||| |||||| |||||   ||||||||||||||||||   |||||||| | ||||||||    
T  46703500 ttggtgagattgggaaa----atgagtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctc-tttgtaag 46703594  T
Q  165 aactctcattgatagtggattggagagaacaatct 199  Q
    ||  |||||| ||||||||||||||||| ||||||    
T  46703595 aa--ctcatttatagtggattggagagatcaatct 46703627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 5136049 - 5136188
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaac-ttgtcatagctaatttcttgtaaccatttgt 150  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||| |||||| ||||||||||||||||||  ||||    
T  5136049 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacattgtca-agctaatttcttgtaacctcttgt 5136142  T
Q  151 atcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    || |||||||| ||||||||   ||||||||||||||||||| ||||    
T  5136143 attccttttgtaaagaactc-atttgatagtggattggagagtacaa 5136188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 5138274 - 5138413
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaac-ttgtcatagctaatttcttgtaaccatttgt 150  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||| |||||| ||||||||||||||||||  ||||    
T  5138274 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacattgtca-agctaatttcttgtaacctcttgt 5138367  T
Q  151 atcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    || |||||||| ||||||||   ||||||||||||||||||| ||||    
T  5138368 attccttttgtaaagaactc-atttgatagtggattggagagtacaa 5138413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 379401 - 379506
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||| |||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| |||||||||   |||||||||||||||||||    
T  379401 gtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcgcttt-gtaagaacta--attgatagtggattggaga 379497  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  379498 gatcaatct 379506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 12073413 - 12073518
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||| |||||||| |||| |||||   ||||||||| ||||||| |||||||||| |||| ||||||||||  |||||||||||||||||||    
T  12073413 gtagaaattaggtttgttctttgtgagcttgttgaagctaatttattgtaactcatttgtatctcttt-gtaagaactc--attgatagtggattggaga 12073509  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  12073510 gatcaatct 12073518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 41639447 - 41639552
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||||||| |   |||||||||||||||||| |||||||||  ||| ||||||||||  || ||||||||||||||||    
T  41639447 gtagaaattagggttgttctttgtgaactttttgaagctaatttcttgtaacccatttgtatctattt-gtaagaactc--atcgatagtggattggaga 41639543  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  41639544 gatcaatct 41639552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 54883041 - 54883146
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||||||||| || |||| |||||   |||||||||||||||||| ||||||||| |||| ||||||||||  ||||||||||||||||||     
T  54883041 gtagaaattagggttgttttttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggagg 54883137  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  54883138 gatcaatct 54883146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 199
Target Start/End: Original strand, 3913408 - 3913574
Alignment:
Q  36 aacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagtagaaattagggttgttctt-gtgaacttgtcat 126  Q
    |||||||||| |||||||||||||||||||||||||       ||||||||||||||    | ||||||||||||| | ||||||| ||||  ||||       
T  3913408 aacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgggaaa----atgagtagaaattagagctgttctttgtgagtttgttga 3913503  T
Q  127 agctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatct 199  Q
    |||||||||||| ||||| ||||||||  |||| ||||||||||  ||||||||||||||||||||| ||||||    
T  3913504 agctaatttcttttaacccatttgtatatcttt-gtaagaactc--attgatagtggattggagagatcaatct 3913574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 35662462 - 35662565
Alignment:
Q  93 gtagaaattagggttgttcttg-tgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||||||||||||  |||  ||||   ||||||||||||||||| |||||||||| |||| ||||||||||  |||||||||||||||||||    
T  35662462 gtagaaattagggttgttctttatgagtttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactc--attgatagtggattggaga 35662558  T
Q  191 gaacaat 197  Q
    || ||||    
T  35662559 gatcaat 35662565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 6542415 - 6542354
Alignment:
Q  9 gttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    |||||||||||||||| |||||||| ||||||||||| ||||||||||| |||||||||||||    
T  6542415 gttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaattattgagtgtcttg 6542354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 29254424 - 29254489
Alignment:
Q  5 tagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    |||||||||||||||||||| |||||||| |||||| |||| ||| |||||||||||||||||||||    
T  29254424 tagagttctcttgggttggg-aaacattgtaaacacattgggtgaatgaaaatcattgagtgtcttg 29254489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 192
Target Start/End: Original strand, 2209734 - 2209833
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacca--tttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
    ||||||||||||||| ||||| |||| |||||   ||||||||||||||||||   |||||||| |||| ||||||||||  ||||||||||||||||||    
T  2209734 gtagaaattagggtttttctttgtgagcttgttgaagctaatttcttgtaacccattttgtatctcttt-gtaagaactc--attgatagtggattggag 2209830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 8648161 - 8648265
Alignment:
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||| ||||||  ||||   |||||||||||| ||||| ||||||||| |||| ||||||||||  ||||||| ||||||||||||    
T  8648161 tagaaattagggttgttcattgtgagtttgttgaagctaatttcttataacccatttgtatctcttt-gtaagaactc--attgatattggattggagag 8648257  T
Q  192 aacaatct 199  Q
    | ||||||    
T  8648258 atcaatct 8648265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 45687417 - 45687231
Alignment:
Q  9 gttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagtagaaat 100  Q
    |||||||||||||||| |||||||| ||||||||||| ||||||||| |  |||| |||||||       ||||||||||||||    | | | ||||||    
T  45687417 gttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaattttttgattgtcttgttcattggtgagattgggaaa----atgggaagaaat 45687323  T
Q  101 tagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagaga 192  Q
    |||| || |||||| |||| ||||||| |||||||||||| |||| ||||||||||  ||| ||||||||||  |||||||||||||||||||||    
T  45687322 taggttttgttctttgtgagcttgtcaaagctaatttcttataactcatttgtatctattt-gtaagaactc--attgatagtggattggagaga 45687231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 50262845 - 50262742
Alignment:
Q  96 gaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagagaa 193  Q
    ||||||| |||||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| ||||||||||  ||||||||| ||||||||| |     
T  50262845 gaaattacggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagttgattggagatat 50262749  T
Q  194 caatctt 200  Q
    |||||||    
T  50262748 caatctt 50262742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 51336998 - 51337056
Alignment:
Q  9 gttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc 67  Q
    |||||||||||||||  |||||||| ||||||||||| ||||||||||||||||||||||    
T  51336998 gttctcttgggttgga-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtc 51337056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 37229957 - 37229763
Alignment:
Q  9 gttctcttgggttggggaaacatt-gcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||||||||  ||||||| | ||||||||||| ||||||||||||| |||||||||||       ||||||||||||||     |  |||||||    
T  37229957 gttctcttgggttgga-aaacatttgtaaacaccttgggtgagtgaaaatcaatgagtgtcttgttcattggtgagattgggaaa-----atggtagaaa 37229864  T
Q  100 ttagggt-tgttctt-gtgaacttgtcatagctaatttcttgtaaccatttgtatccct-tttgtaagaactctcattgatagtggattggagagaacaa 196  Q
    ||||||| ||||||| |||| ||||| | ||| ||||| |||||||| ||| |||  || |||||||||||||  ||| ||||||||||||||||| |||    
T  37229863 ttagggtgtgttctttgtgagcttgttaaagcaaatttgttgtaaccctttttatatctctttgtaagaactc--atttatagtggattggagagatcaa 37229766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 199
Target Start/End: Original strand, 12119553 - 12119666
Alignment:
Q  87 aaaagagtagaaattagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccattt-gtatcccttttgtaagaactctcattgatagtgga 183  Q
    |||||||||||||||| |||| |||||| |||||||| |   |||||||||||||||||| ||| ||||| ||||   ||||||||  ||| ||||||||    
T  12119553 aaaagagtagaaattatggtttgttctttgtgaactttttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactc--atttatagtgga 12119650  T
Q  184 ttggagagaacaatct 199  Q
    ||||||||| ||||||    
T  12119651 ttggagagatcaatct 12119666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 31474097 - 31474145
Alignment:
Q  23 gggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    ||||||||||| |||||| |||| |||||||||||||||||||||||||    
T  31474097 gggaaacattgtaaacactttgggtgagtgaaaatcattgagtgtcttg 31474145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 31474207 - 31474270
Alignment:
Q  127 agctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagaga 192  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||  ||||||||| |||||||||||    
T  31474207 agctaatttcttgtaactcatttgtatctcttt-gtaagaactc--attgatagttgattggagaga 31474270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 13009538 - 13009493
Alignment:
Q  144 catttgtatcccttttgtaagaactctcattgatagtggattggagaga 192  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  13009538 catttgtatcccttt-gtaagaactc--attgatagtggattggagaga 13009493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 41639284 - 41639353
Alignment:
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttg 160  Q
    ||||||||||||||||||| |||| ||||| |   |||||||||||||||| ||||||||||| ||||||    
T  41639284 gtagaaattagggttgttctttgtaaactttttgaagctaatttcttgtaacccatttgtatctcttttg 41639353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 199
Target Start/End: Complemental strand, 5207996 - 5207884
Alignment:
Q  87 aaaagagtagaaattagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgtatccct-tttgtaagaactctcattgatagtgga 183  Q
    ||||| ||||||||||||||| |||||| ||||||||||   ||||||||| ||| |||| || ||||  || |||||||||||||  ||||||||||||    
T  5207996 aaaagggtagaaattagggtttgttctttgtgaacttgttgaagctaatttattgcaaccctt-gtatatctatttgtaagaactc--attgatagtgga 5207900  T
Q  184 ttggagagaacaatct 199  Q
    ||||| ||| ||||||    
T  5207899 ttggaaagatcaatct 5207884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 1e-49; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 26177816 - 26178000
Alignment:
Q  1 tgattagag-ttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    ||||||||| ||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||      ||||| |||||||    
T  26177816 tgattagagcttctcttgggttggg-aaacatggtaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgg------aaaagggtagaaa 26177908  T
Q  100 ttagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||| |||||||||||||| | ||||||||||||||| | |||||||| ||||||||||||  |||||||||||||||||||||||    
T  26177909 ttagggttgttctttgtgaacttgtcaaatctaatttcttgtaactcttttgtatctcttttgtaagaa--ctcattgatagtggattggagag 26178000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 16409408 - 16409593
Alignment:
Q  1 tgattagag-ttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    ||||||||| ||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||     || |||||||    
T  16409408 tgattagagcttctcttgggttggg-aaacatggtaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattggaaaa-----agggtagaaa 16409501  T
Q  100 ttagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||| |||||||||||| | ||||||||||||||| | |||||||| ||||||||||||  |||||||||||||||||||||||    
T  16409502 ttagggttgttctttgtgaacttgtcaaatctaatttcttgtaactcttttgtatctcttttgtaagaa--ctcattgatagtggattggagag 16409593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 18441883 - 18441698
Alignment:
Q  1 tgattagag-ttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    ||||||||| ||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||     || |||||||    
T  18441883 tgattagagcttctcttgggttggg-aaacatgggaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattggaaaa-----agggtagaaa 18441790  T
Q  100 ttagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||| |||||||||||||| | ||||||||||||||| | |||||||| ||||||||||||  |||||||||||||||||||||||    
T  18441789 ttagggttgttccttgtgaacttgtcaaatctaatttcttgtaactcttttgtatctcttttgtaagaa--ctcattgatagtggattggagag 18441698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 9789459 - 9789274
Alignment:
Q  1 tgattagag-ttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    ||||||||| ||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||      ||||| |||||||    
T  9789459 tgattagagcttctcttgggttggg-aaacatgggaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgg-----aaaaagggtagaaa 9789366  T
Q  100 ttagggttgtt-cttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    ||| ||||||| ||||||||||||||| | ||||||||||||||| | |||||||| ||||||||||||  |||||||||||||||||||||||    
T  9789365 ttaaggttgttccttgtgaacttgtcaaatctaatttcttgtaactcttttgtatctcttttgtaagaa--ctcattgatagtggattggagag 9789274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 25412688 - 25412886
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||     || |    
T  25412688 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa-----aggg 25412781  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| | ||||||||||  |||||||||||||||||||||||    
T  25412782 tagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctc-tttgtaagaa--ctcattgatagtggattggagag 25412878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 29751394 - 29751202
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||  ||| ||||||||||||||||||||||||||||||||||     || |||||||    
T  29751394 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtagagagaaaatcattgagtgtcttggtgagattgggaaa-----agggtagaaa 29751302  T
Q  100 ttagggtt-gttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagagaacaat 197  Q
    |||||||| |||| |||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  29751301 ttagggtttgttcattgtgaacttgtcaaatctaatttcttgtaaccttttgtatcccttttgtaagaactct--ttgatagtggattggagagtacaat 29751204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 13342987 - 13343178
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||   ||||| |    
T  13342987 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaa---aaaaggg 13343082  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| || |||||||| ||||   |||||  |||||||||||||||||||||||    
T  13343083 tagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaatccttttgtatctcttt--gaagaa--ctcattgatagtggattggagag 13343178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 29720298 - 29720490
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||  ||| ||||||||||||||||||||||||||||||||||     || |||||||    
T  29720298 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtagagagaaaatcattgagtgtcttggtgagattgggaaa-----agggtagaaa 29720390  T
Q  100 ttagggtt-gttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagagaacaat 197  Q
    |||||||| |||| |||||||||||||  | |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  29720391 ttagggttagttcattgtgaacttgtctaatctaatttcttgtaaccttttgtatcccttttgtaagaactct--ttgatagtggattggagagtacaat 29720488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 29722458 - 29722650
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||  ||| ||||||||||||||||||||||||||||||||||     || |||||||    
T  29722458 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtagagagaaaatcattgagtgtcttggtgagattgggaaa-----agggtagaaa 29722550  T
Q  100 ttagggtt-gttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagagaacaat 197  Q
    |||||||| |||| |||||||||||||  | |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  29722551 ttagggttagttcattgtgaacttgtctaatctaatttcttgtaaccttttgtatcccttttgtaagaactct--ttgatagtggattggagagtacaat 29722648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 36074286 - 36074093
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||||  ||||| |    
T  36074286 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa-aaaaaggg 36074189  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||||||| | |||||||| ||||   |||||  |||||||||||||||||||||||    
T  36074188 tagaaattagggttgttctttgcgaacttgtcaaagctaatttcttgtaactcttttgtatctcttt--gaagaa--ctcattgatagtggattggagag 36074093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 30182515 - 30182706
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    ||||  |    
T  30182515 tgattagagttctcttgggttggg-aaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattggga----aaaatgg 30182609  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| || ||| |||| | |||| |||||  |||||||||||||||||||||||    
T  30182610 tagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttctatctc-tttggaagaa--ctcattgatagtggattggagag 30182706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 32636750 - 32636950
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtctt-------ggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||| | | |||||||| ||||||||||| ||||||||||||||||||||||||       |||||||||||||||    | |     
T  32636750 tgattagagttctcttgggtagtg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttattcattggtgagattgggaaa----atgg 32636844  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||  ||||||||||||||||||    
T  32636845 gtagaaattatggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctc-tttgtaagaactct--ttgatagtggattggaga 32636941  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  32636942 gatcaatct 32636950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 13239678 - 13239877
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||       ||||||||||||| |    ||||  |    
T  13239678 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaa----aaaatgg 13239772  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||| ||| ||||||||||||   ||||||||||||||||| | |||||||| | ||||||||||  |||||||||||||||||||||||    
T  13239773 tagaaattagggtttttctttgtgaacttgttgaagctaatttcttgtaactcttttgtatctc-tttgtaagaa--ctcattgatagtggattggagag 13239869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 54 - 199
Target Start/End: Complemental strand, 22536471 - 22536332
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgta 151  Q
    |||||||||||||||||||||||||||||||     || ||||||||||||||| |||| |||||||||||||| |||||||||||||||||| ||||||    
T  22536471 aatcattgagtgtcttggtgagattgggaaa-----agggtagaaattagggtttgttcattgtgaacttgtca-agctaatttcttgtaaccttttgta 22536378  T
Q  152 tcccttttgtaagaactctcattgatagtggattggagagaacaatct 199  Q
    |||||||||||||||||||  ||||||||||||||| ||| |||||||    
T  22536377 tcccttttgtaagaactct--ttgatagtggattggggagtacaatct 22536332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 30683162 - 30682964
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||    ||||| |    
T  30683162 tgattagagttctcttgggttgcg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcatttgtgagattggga----aaaaggg 30683068  T
Q  94 tagaaattagggttgttcttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagaga 192  Q
    |||||||||||||| |  ||||||||||||   |||||||||||||||| || |||||||  | ||||||||||  ||||||||||||||||||||||||    
T  30683067 tagaaattagggttct--ttgtgaacttgttgaagctaatttcttgtaacccttttgtatttc-tttgtaagaatactcattgatagtggattggagaga 30682971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 3 - 199
Target Start/End: Complemental strand, 39468789 - 39468591
Alignment:
Q  3 attagagttctcttgggttggggaaacattgcaaacaccttg-gtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagt 94  Q
    |||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||       ||||||||||||||    | | ||    
T  39468789 attagagttctcttgggttggg-aaacattgtaaacaccttgagtgagtgaaaatcattgagtgtcttgttcattagtgagattgggaaa----atgggt 39468695  T
Q  95 agaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagaga 192  Q
    ||||||||||||||||||| ||||||||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||| ||||||    
T  39468694 agaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattagagaga 39468598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 10 - 143
Target Start/End: Original strand, 26170717 - 26170844
Alignment:
Q  10 ttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggttgt 109  Q
    ||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||      |||||| |||||||||||| ||||    
T  26170717 ttctcttgggttggg-aaacatggtaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattg------gaaaagggtagaaattaggattgt 26170809  T
Q  110 tc-ttgtgaacttgtcatagctaatttcttgtaac 143  Q
    || |||||||||||||| | |||||||||||||||    
T  26170810 tctttgtgaacttgtcaaatctaatttcttgtaac 26170844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 37439070 - 37439267
Alignment:
Q  11 tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtctt-------ggtgagattgggaaatgaaaaga----gtagaaa 99  Q
    |||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||       ||||||||||||||   |||| |    |||||||    
T  37439070 tctcttgggttggg-aaacattgtaaacactttggtgagtgaaaatcattgagtgtcttattcattggtgagattgggaaggaaaaataaaaggtagaaa 37439168  T
Q  100 ttagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagagaacaat 197  Q
    |||||||||||||| |||||||||||| || |||||||||||||| | |||||||| |||| ||||||||||  ||||||||||||||||||||| ||||    
T  37439169 ttagggttgttctttgtgaacttgtcaaagttaatttcttgtaactcttttgtatctcttt-gtaagaactc--attgatagtggattggagagatcaat 37439265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 13488129 - 13488329
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||  |||||||| ||||||||||| ||||||||||| |||||||||||||       || |||||||||||    | |     
T  13488129 tgattagagttctcttgggttgga-aaacattgtaaacaccttgggtgagtgaaaattattgagtgtcttgttcattggtaagattgggaaa----atgg 13488223  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| ||||||||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  13488224 gtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 13488320  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  13488321 gatcaatct 13488329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 42428672 - 42428472
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||||||||||||||||       |||||||||||||||    ||| |     
T  42428672 tgattagagttctcttgggttggg-aaatattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggga----aaatgg 42428578  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||| |||| ||| ||||||||||||   |||||||||||||||| ||||||||||| | ||||||||||  ||||||||||||||||||||||    
T  42428577 gtagaaattatggtttttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctc-tttgtaagaa--ctcattgatagtggattggaga 42428481  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  42428480 gatcaatct 42428472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 199
Target Start/End: Original strand, 10593244 - 10593384
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgta 151  Q
    ||||||||||||||||||||||||||||| |     || ||||||||||||||| |||| | |||||||||||| |||||||||||||||||| ||||||    
T  10593244 aatcattgagtgtcttggtgagattgggaga-----agggtagaaattagggtttgttcatagtgaacttgtca-agctaatttcttgtaaccttttgta 10593337  T
Q  152 tcccttttgtaagaactctcattgatagtggattggagagaacaatct 199  Q
    ||||||||||||||||||   ||||||||||||||||||| |||||||    
T  10593338 tcccttttgtaagaactc-atttgatagtggattggagagtacaatct 10593384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 31182899 - 31183090
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacacctt-ggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||       |||||||||| ||||     |     
T  31182899 tgattagagttctcttgggttggg-aaacattgtaaacaccttaggtgagtgaaaatcattgagtgtcttgttcatttgtgagattggaaaat-----gg 31182992  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||| |||||| ||||||  ||||   || |||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  31182993 gtagaaattaggattgttctttgtgagtttgtttaagttaatttcttgtaaccatttgtatccc-tttgtaagaa--ctcattgatactggattggagag 31183089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 28750897 - 28750697
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||       |||||||||||||||    ||| |     
T  28750897 tgattagagttctcttgggttggg-aaacattgaaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggga----aaatgg 28750803  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| || |||| ||||   || ||||||| ||||| |||||||||| | |||||||||||  ||||||||||||||||||||||    
T  28750802 gtagaaattagggttgttctttatgaaattgttgaagttaatttcctgtaacccatttgtat-ctttttgtaagaa--ctcattgatagtggattggaga 28750706  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  28750705 gatcaatct 28750697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 533695 - 533895
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacacctt-ggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||       |||||||||||||||    ||| |     
T  533695 tgattagagttctcttgggtt-gggaaacattgtaaacaccttgggtgagtgaaaatcattgcgtgtcttgttcattggtgagattggga----aaatgg 533789  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||||||| || |||||| |||||   ||||||||| |||||| ||||||||||| | ||||||||||  |||||||||||||||||||| |    
T  533790 gtagaaattagggttggtctttgtgagcttgttgaagctaattttttgtaacccatttgtatctc-tttgtaagaa--ctcattgatagtggattggaaa 533886  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  533887 gatcaatct 533895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 8566188 - 8565988
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    ||||||||||||||||||||| || |||||||| ||||||||||| |||||||||||||||||||||||||       ||||||||| ||    ||| |     
T  8566188 tgattagagttctcttgggttcgg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgaga----aaatgg 8566094  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||| ||||| |||||| |||||| |||||   |||||||||||||||| ||||||||||||| | ||||||||  ||||||||||||||||||||||    
T  8566093 gtagaacttaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccc-tctgtaagaa--ctcattgatagtggattggaga 8565997  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  8565996 gatcaatct 8565988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 25078054 - 25078247
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||   || || ||||||||||||||||||||||||||||||| |      |||||||    
T  25078054 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtaaagagagaatcattgagtgtcttggtgagattgggaaaggg-----gtagaaa 25078146  T
Q  100 ttagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    |||||||| |||| | |||||||||||| ||||||||||||||||||  ||||||||||||||| ||||||||   ||||||||||||||||||| ||||    
T  25078147 ttagggtttgttcatagtgaacttgtca-agctaatttcttgtaacctcttgtatcccttttgtaaagaactc-atttgatagtggattggagagtacaa 25078244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 25136023 - 25136216
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||   || || ||||||||||||||||||||||||||||||| |      |||||||    
T  25136023 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtaaagagagaatcattgagtgtcttggtgagattgggaaaggg-----gtagaaa 25136115  T
Q  100 ttagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    |||||||| |||| | |||||||||||| ||||||||||||||||||  ||||||||||||||| ||||||||   ||||||||||||||||||| ||||    
T  25136116 ttagggtttgttcatagtgaacttgtca-agctaatttcttgtaacctcttgtatcccttttgtaaagaactc-atttgatagtggattggagagtacaa 25136213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 33831606 - 33831806
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||  |||||||| ||||||||||| ||||||||||||||||||||||       || |||||||||| |    ||| |     
T  33831606 tgattagagttctcttgggttgga-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttattcatttgtgagattggaa----aaatgg 33831700  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||| |||||| |||||| |||||   |||||||||||||||| ||||||||||| | ||||||||||  |||||||||||||||||| |||    
T  33831701 gtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatctc-tttgtaagaa--ctcattgatagtggattgaaga 33831797  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  33831798 gatcaatct 33831806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 42426477 - 42426277
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||| | ||||| |||||||| ||||||||||| ||||||||||| |||||||||||||       ||||||||| ||||    | |     
T  42426477 tgattagagttctcttagattggg-aaacattgtaaacaccttgggtgagtgaaaattattgagtgtcttgttcattggtgagattgagaaa----atgg 42426383  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| ||||| ||||   ||||||||||||| |||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  42426382 gtagaaattagggttgttctttgtgaaattgttgaagctaatttcttgcaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 42426286  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  42426285 gatcaatct 42426277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 537951 - 538151
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||| ||||| |||||| | ||||||||||| |||||||||||||||| ||||||||       ||||||||||||    ||| |     
T  537951 tgattagagttctcttggcttggg-aaacatcgtaaacaccttgggtgagtgaaaatcattgcgtgtcttgttcattagtgagattggga----aaatgg 538045  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||| ||||| || |||||| |||||   |||||||||||||||| ||||||||||| | ||||||||||  |||||||||||| |||||||||    
T  538046 gtagaaattaaggttgctctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctc-tttgtaagaa--ctcattgatagtagattggaga 538142  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  538143 gatcaatct 538151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 213486 - 213591
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| ||||| | |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  213486 gtagaaattagggttgttctttgtgagcttgttaaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 213582  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  213583 gatcaatct 213591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 40147282 - 40147387
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   ||||||||||||||||| |||||||||| |||| ||||||||||  |||||||||||||||||||    
T  40147282 gtagaaattagggttgttcttcgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactc--attgatagtggattggaga 40147378  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  40147379 gatcaatct 40147387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 54 - 191
Target Start/End: Original strand, 40380076 - 40380209
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgta 151  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||||||||| | ||||||||||||||||  |||||    
T  40380076 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacttgtcaaa-ctaatttcttgtaacctcttgta 40380169  T
Q  152 tcccttttgt-aagaactctcattgatagtggattggagag 191  Q
    |||||||||| ||||||||   |||||||||||||||||||    
T  40380170 tcccttttgtaaagaactc-atttgatagtggattggagag 40380209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 54 - 191
Target Start/End: Original strand, 40382287 - 40382420
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgta 151  Q
    ||||||||||||||||||||||||||||||| |      |||||| |||||||| |||| | |||||||||||| ||||||||||||||||||  |||||    
T  40382287 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaagttagggtttgttcatagtgaacttgtca-agctaatttcttgtaacctcttgta 40382380  T
Q  152 tcccttttgt-aagaactctcattgatagtggattggagag 191  Q
    |||||||||| ||||||||   |||||||||||||||||||    
T  40382381 tcccttttgtaaagaactc-atttgatagtggattggagag 40382420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5887658 - 5887589
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacacctt-ggtgagtgaaaatcattgagtgtcttg 70  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  5887658 tgattagagttctcttgggtt-gggaaacattgtaaacaccttgggtgagtgaaaatcattgaatgtcttg 5887589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 16452007 - 16452199
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    ||||||||||||||||||||| || |||||||| |||||||||||| ||||| ||||||||||||||       ||| ||||||||| |    ||| | |    
T  16452007 tgattagagttctcttgggttcgg-aaacattgtaaacaccttggtaagtgacaatcattgagtgtcttgttcattgatgagattggaa----aaatggg 16452101  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    ||||||||| | |||||| || ||| |||||   |||||||||||||||| ||||||||||| | ||||||||||  |||||| ||||||||||||||||    
T  16452102 tagaaattaagtttgttctttctgagcttgttgaagctaatttcttgtaacccatttgtatctc-tttgtaagaa--ctcattcatagtggattggagag 16452198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 42926819 - 42926888
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||||||    
T  42926819 tgattagagttctcttggattggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttg 42926888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 16546615 - 16546754
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaac-ttgtcatagctaatttcttgtaaccatttgt 150  Q
    ||||||||||||||||||||||||| ||||| |      ||||||||||||||| |||| | |||||| |||||| ||||||||||||||||||  ||||    
T  16546615 aatcattgagtgtcttggtgagattaggaaaggg-----gtagaaattagggtttgttcatagtgaacattgtca-agctaatttcttgtaacctcttgt 16546708  T
Q  151 atcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    ||||||||||| ||||||||   ||||||||||||||||||| ||||    
T  16546709 atcccttttgtaaagaactc-atttgatagtggattggagagtacaa 16546754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 19806310 - 19806378
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacacctt-ggtgagtgaaaatcattgagtgtcttg 70  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  19806310 tgattagagttctcttgggtt-gggaaacattgtaaacaccttgggtgagtg-aaatcattgagtgtcttg 19806378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 28278337 - 28278442
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||| |||||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| |||| |||||  |||||||||||||||||||    
T  28278337 gtagaaattatggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaaaaactc--attgatagtggattggaga 28278433  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  28278434 gatcaatct 28278442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 3075900 - 3075833
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtct 68  Q
    |||||| ||||||||||||||||| |||||||| ||||||||| | |||||||||||||||||||||||    
T  3075900 tgattaaagttctcttgggttggg-aaacattgtaaacacctttgatgagtgaaaatcattgagtgtct 3075833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 5058068 - 5058171
Alignment:
Q  93 gtagaaattagggttgttcttgtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||||| |||| |||||   ||||| ||||||||| || ||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  5058068 gtagaaattagggttgttct-gtgagcttgttgaagctattttcttgtatcccatttgtatctcttt-gtaagaactc--attgatagtggattggagag 5058163  T
Q  192 aacaatct 199  Q
    | ||||||    
T  5058164 atcaatct 5058171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 16544393 - 16544532
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattaggg-ttgttc-ttgtgaac-ttgtcatagctaatttcttgtaaccatttgt 150  Q
    |||||||||||||||||||||||||||     |||| | ||||||||||||| |||||| | |||||| |||||| |||||||||||  |||||  ||||    
T  16544393 aatcattgagtgtcttggtgagattgg-----gaaaggggtagaaattagggtttgttcatagtgaacattgtca-agctaatttctcataacctcttgt 16544486  T
Q  151 atcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    ||||||||||| ||||||||   ||||||||||||||||||| ||||    
T  16544487 atcccttttgtaaagaactc-atttgatagtggattggagagtacaa 16544532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 38747026 - 38747131
Alignment:
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| |||||| |||||   |||||||||||||||| ||||||||||| |||| | || |   ||||||||||| ||||||||||    
T  38747026 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttggaaaaa---ctcattgatagaggattggaga 38747122  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  38747123 gatcaatct 38747131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 197
Target Start/End: Complemental strand, 9049488 - 9049386
Alignment:
Q  94 tagaaattagggtt-gttcttgtgaacttgtcatagctaatttcttgtaacca-tttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||| ||| ||| |||||| |||||   ||||||||||||||||||| |||||||| | ||||||||||  |||||||| ||||||||||||||    
T  9049488 tagaaattagtgtttgtttttgtgagcttgttgaagctaatttcttgtaaccattttgtatctc-tttgtaagaa--ctcattgacagtggattggagag 9049392  T
Q  192 aacaat 197  Q
    | ||||    
T  9049391 atcaat 9049386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 3e-47; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 44303780 - 44303973
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||  ||||| |    
T  44303780 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa--aaaaggg 44303876  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    ||||||||| |||||||||| |||||||||||| |||||||||||||||| || |||||||| ||||| ||||||  |||||||||||||||||||||||    
T  44303877 tagaaattaaggttgttctttgtgaacttgtcaaagctaatttcttgtaatccttttgtatctctttt-taagaa--ctcattgatagtggattggagag 44303973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 17982579 - 17982771
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||   ||||| |    
T  17982579 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaa---aaaaggg 17982674  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||| |||||||||||||| || ||||||||||||| || |||||||| | |||| |||||  |||||||||||||||||||||||    
T  17982675 tagaaattagggttgttctttgtgaacttgtcaaagttaatttcttgtaacccttttgtatctc-tttggaagaa--ctcattgatagtggattggagag 17982771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 19945602 - 19945409
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||   |||| |    
T  19945602 tgattagagttctcttgggtcggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa---aaaggg 19945507  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacca--tttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||| |||||||||| |||||||||||| |||||||||||||||||||  |||||||| | |||| |||||  ||||||||||||||||||||||    
T  19945506 tagaaattatggttgttctttgtgaacttgtcaaagctaatttcttgtaaccacttttgtatctc-tttggaagaa--ctcattgatagtggattggaga 19945410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 31218183 - 31218375
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||   ||||  |    
T  31218183 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaa---aaaatgg 31218278  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| || |||||||| | |||| |||||  ||||||||||||||||| |||||    
T  31218279 tagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctc-tttggaagaa--ctcattgatagtggattagagag 31218375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 3439438 - 3439629
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||   || ||||||||||||||||||||||||||||||||||     || |||||||    
T  3439438 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtaaagagaaaatcattgagtgtcttggtgagattgggaaa-----agggtagaaa 3439530  T
Q  100 ttagggtt-gttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagagaacaat 197  Q
    |||||||| |||| || |||||||| || |||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  3439531 ttagggtttgttcattatgaacttggca-agctaatttcttgtaaccttttgtatcccttttgtaagaactct--ttgatagtggattggagagtacaat 3439627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 12702880 - 12702676
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattggg-aaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||       |||||||||||||| |||  |||||     
T  12702880 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattaagtgtcttgttcattggtgagattgggaaaaaaaaaagg 12702782  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| ||||||||||||   |||||||||||||||| || ||||| || | ||||||||||  |||||||||| |||||||||||    
T  12702781 gtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtgtctc-tttgtaagaa--ctcattgatattggattggaga 12702685  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  12702684 gatcaatct 12702676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 25689889 - 25690077
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||   || || |||||||||||||||||||||||||||||||    ||| |||||||    
T  25689889 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtaaagagagaatcattgagtgtcttggtgagattgggaaa----aag-gtagaaa 25689981  T
Q  100 ttagggtt-gttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagagaacaa 196  Q
    |||||||| |||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  25689982 ttagggtttgttcattgtgaacttgtca-agctaatttcttgtaaccttttgtatcccttttgtaagaactct--ttgatagtggattggagagtacaa 25690077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 34254570 - 34254373
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagag 93  Q
    ||||||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||     || |    
T  34254570 tgattagagttctcttgggttggaga--cattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa-----aggg 34254478  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||| || |||||||| | ||||||||||  || ||||||||||||||||||||    
T  34254477 tagaaattagggttgttctttgtgaacttgtcaaagttaatttcttgtaacccttttgtatctc-tttgtaagaa--cttattgatagtggattggagag 34254381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 42498120 - 42498320
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagag 93  Q
    |||||| ||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||  ||||| |    
T  42498120 tgattaaagttctcttgggttggg-aaacgttgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa--aaaag-g 42498215  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaaccattt-gtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||||| ||||||||||   |||||||||||||||||| ||| ||||  |||| ||||||||||  ||||||||||||||||||||    
T  42498216 tagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatttcttt-gtaagaactc--attgatagtggattggagag 42498312  T
Q  192 aacaatct 199  Q
    | ||||||    
T  42498313 atcaatct 42498320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 1746460 - 1746269
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||       |||||||||||  ||||  ||||| |    
T  1746460 tgattagagttctctttggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagatt--gaaaaaaaaag-g 1746365  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| || |||||||| ||||   |||||  |||||||||||||||||||||||    
T  1746364 tagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt--gaagaa--ctcattgatagtggattggagag 1746269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 2627668 - 2627854
Alignment:
Q  1 tgattagag-ttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    ||||||||| ||||||||||||||| |||||| | ||||||||||  ||| ||||||||||||||||||||||||||||||||||     || |||||||    
T  2627668 tgattagagcttctcttgggttggg-aaacatgggaaacaccttgaagagagaaaatcattgagtgtcttggtgagattgggaaa-----agggtagaaa 2627761  T
Q  100 ttagggttgttc-ttgtgaacttgtcatagctaatttcttgtaaccattt--gtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||| |||||||||||||| | ||||||||||| |||  |||  ||||| ||| |||||||||||  ||||||||||||||||||||    
T  2627762 ttagggttgttcattgtgaacttgtcaaatctaatttcttgcaactctttttgtatctcttgtgtaagaactc--attgatagtggattggagag 2627854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 15212712 - 15212912
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||||       ||||||||||||||    | |     
T  15212712 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgaatgtcttgttcattggtgagattgggaaa----atgg 15212806  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| ||||||||||   |||||||||||||||||| ||||||||| |||| ||||||||||  ||||||| |||||||||||    
T  15212807 gtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgataatggattggaga 15212903  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  15212904 gatcaatct 15212912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 34256746 - 34256549
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagag 93  Q
    ||||||||||| |||||||||||  |||||||| ||||||||||||| ||||||||||||||||||||||       |||||||||| |||     |  |    
T  34256746 tgattagagttatcttgggttgg--aaacattgtaaacaccttggtgtgtgaaaatcattgagtgtcttgttcattggtgagattggaaaa-----atgg 34256654  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaaccattt-gtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||||| ||| ||||| |||| ||||||||||  ||||||||||||||||||||    
T  34256653 tagaaattagggttgttctttgtgaacttgtcaaagttaatttcttgtaacccttttgtatctcttt-gtaagaactc--attgatagtggattggagag 34256557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 33352076 - 33352276
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacacctt-ggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| ||||| ||||||||||||||||||       |||||||||||||||    ||| |     
T  33352076 tgattagagttctcttgggtt-gggaaacattgtaaacaccttgggtgattgaaaatcattgagtgtcttgttcattggtgagattggga----aaatgg 33352170  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||| ||||||||||||||| ||||||||||||   | |||||||||||||| ||||||||||| | ||||||||||  ||||||||||||||||||||||    
T  33352171 gtaaaaattagggttgttctttgtgaacttgttgaacctaatttcttgtaacccatttgtatctc-tttgtaagaa--ctcattgatagtggattggaga 33352267  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  33352268 gatcaatct 33352276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 43036349 - 43036549
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||       |||||||||||||||    ||| |     
T  43036349 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggga----aaatgg 43036443  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| ||||||||||||   | ||||||||||||||  |||||||||| | ||||||||||  ||||||||||||||||| ||||    
T  43036444 gtagaaattagggttgttctttgtgaacttgttgaaactaatttcttgtaattcatttgtatctc-tttgtaagaa--ctcattgatagtggatttgaga 43036540  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  43036541 gatcaatct 43036549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 4731584 - 4731777
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||       |||||||||||||||    ||| |     
T  4731584 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggga----aaatgg 4731678  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||||||| || |||||| |||||   | |||||||||||||| ||||||||||| | ||||||||||  ||||||||||||||||||||||    
T  4731679 gtagaaattagggttgctctttgtgagcttgttgaacctaatttcttgtaacccatttgtatctc-tttgtaagaa--ctcattgatagtggattggaga 4731775  T

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Target: chr8; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 27811204 - 27811404
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||| ||||||  |||||||| ||||||||||| ||||||||||||||||||||||       |||||||||||||||    ||| |     
T  27811204 tgattagagttctcttaggttgga-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggga----aaatgg 27811298  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| |||||| |||||   |||||||||||||||| ||||||||||| | ||||||||||  | |||||||||||||||| |||    
T  27811299 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctc-tttgtaagaa--cccattgatagtggattgaaga 27811395  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  27811396 gatcaatct 27811404  T

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Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 6598898 - 6599098
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttg-gtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    ||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||||||       ||||||||||||    ||| |     
T  6598898 tgattagagttctcttgggtt-gggaaacattgtaaacaccttgagtgagtgaaaatcattaagtgtcttgttcatttgtgagattggga----aaatgg 6598992  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||| | |||||| ||| || |||||   |||||||||||||||| ||||||||||  ||||||||||||  ||||||||||||||||| ||||    
T  6598993 gtagaaattaagtttgttctttgcgagcttgtttaagctaatttcttgtaacccatttgtat-acttttgtaagaa--ctcattgatagtggattagaga 6599089  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  6599090 gatcaatct 6599098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 6674351 - 6674551
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttg-gtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    ||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||||||       ||||||||||||    ||| |     
T  6674351 tgattagagttctcttgggtt-gggaaacattgtaaacaccttgagtgagtgaaaatcattaagtgtcttgttcatttgtgagattggga----aaatgg 6674445  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||| | |||||| ||| || |||||   |||||||||||||||| ||||||||||  ||||||||||||  ||||||||||||||||| ||||    
T  6674446 gtagaaattaagtttgttctttgcgagcttgtttaagctaatttcttgtaacccatttgtat-acttttgtaagaa--ctcattgatagtggattagaga 6674542  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  6674543 gatcaatct 6674551  T

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Target: chr8; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 30143268 - 30143466
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-----ttggtgagattgggaaatgaaaagagt 94  Q
    |||||||||||||||||||||||| |||||||| |||||| |||| |||||||||||||||| || |      ||||  |||||||||||    | | ||    
T  30143268 tgattagagttctcttgggttggg-aaacattgtaaacacattgggtgagtgaaaatcattgtgtcttgttcattggccagattgggaaa----atgggt 30143362  T
Q  95 agaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagaga 192  Q
    ||||||||||||||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||||    
T  30143363 agaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggagaga 30143459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 3303912 - 3303712
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttg-gtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    ||||||| |||||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||       |||||||||||||||    ||| |     
T  3303912 tgattagggttctcttgggttggg-aaacattgtaaacaccttgagtgagtgaaaatcattgagtatcttgtttattggtgagattggga----aaatgg 3303818  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||| | |||||| |||||| |||||   | ||||||||||||||| |||||||||| | ||||||||||  |||||||||||||||||| |||    
T  3303817 gtagaaattaagtttgttctttgtgagcttgtttaacctaatttcttgtaactcatttgtatctc-tttgtaagaa--ctcattgatagtggattgaaga 3303721  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  3303720 gatcaatct 3303712  T

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Target: chr8; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 5689197 - 5689397
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttggtgag-attgggaaatgaaaa--gagtag 96  Q
    ||||||| ||||||||| ||| || |||||||| ||||||||||| ||||||||||||||||||||||||| | |  | || ||   |||||  | ||||    
T  5689197 tgattagggttctcttgagtttgg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattaatgagattggaaaaatgggtag 5689295  T
Q  97 aaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagagaac 194  Q
    |||||| ||| || ||| |||| ||||||| |||||||||||||||||| ||||||||| |||| ||||||||||  ||||||||||||||||||||| |    
T  5689296 aaattaaggtggtgctttgtgagcttgtcaaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggagagatc 5689392  T
Q  195 aatct 199  Q
    |||||    
T  5689393 aatct 5689397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 40321014 - 40321206
Alignment:
Q  9 gttctcttgggttggggaaacattgcaaacaccttg-gtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagtagaaat 100  Q
    ||||||||| |||||| |||||||| |||||||||| |||| |||||||||||||||||||||       ||||||||||||||    | | ||||||||    
T  40321014 gttctcttgagttggg-aaacattgtaaacaccttgagtgactgaaaatcattgagtgtcttgttcataggtgagattgggaaa----atgggtagaaat 40321108  T
Q  101 tagggttgttc-ttgtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatc 198  Q
    ||||||||||| |||||| |||||   || ||||||||||||||| ||| ||||| |||| |||| ||||||  |||||||||||||||||||| |||||    
T  40321109 tagggttgttcattgtgagcttgttgaagttaatttcttgtaacccattagtatctcttt-gtaaaaactct--ttgatagtggattggagagatcaatc 40321205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 93 - 191
Target Start/End: Original strand, 9765766 - 9765863
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||| || |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  9765766 gtagaaattagggttgttctttgtgagcttggcaaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 9765862  T

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Target: chr8; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 18141746 - 18141946
Alignment:
Q  1 tgattagagttctcttgggttggggaaacatt-gcaaacaccttggt-gagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaag 91  Q
    ||||||| |||||||| ||||||| ||||||| | |||||||||||  ||||||||||||||||||||||||       ||||||||| ||||    | |    
T  18141746 tgattagggttctcttaggttggg-aaacatttgtaaacaccttgggcgagtgaaaatcattgagtgtcttgttcattggtgagattgtgaaa----atg 18141840  T
Q  92 agtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
     |||||||||||| |||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| |||||||||||  |||||||||||||||||    
T  18141841 ggtagaaattagg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcacttt-gtaagaactct--ttgatagtggattggag 18141936  T
Q  190 agaacaatct 199  Q
    ||| ||||||    
T  18141937 agatcaatct 18141946  T

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Target: chr8; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41365089 - 41365020
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    ||||||||||||| |||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||    
T  41365089 tgattagagttcttttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttg 41365020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 41366856 - 41366656
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttggt-gagattggga--aatgaaaagagtag 96  Q
    |||||||||||||||| | ||||| |||||||| ||||||||||| ||||||||||||||||||||||||| |  ||| || ||   |  ||| | ||||    
T  41366856 tgattagagttctcttagattggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcaagactgagattgagaaaatgggtag 41366758  T
Q  97 aaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagagaac 194  Q
    |||||| | |||||| |||| | |||||   |||||||||||| ||||| ||||||||||| ||||||||||  |||||| ||||||||||||||||| |    
T  41366757 aaattatgtttgttctttgtaagcttgtttaagctaatttcttttaacctatttgtatccc-tttgtaagaa--ctcatttatagtggattggagagatc 41366661  T
Q  195 aatct 199  Q
    |||||    
T  41366660 aatct 41366656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 4283545 - 4283650
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||||||||| || |||| |||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  4283545 gtagaaattagggttgttttttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 4283641  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  4283642 gatcaatct 4283650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 42435138 - 42435033
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  42435138 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 42435042  T
Q  191 gaacaatct 199  Q
     | ||||||    
T  42435041 aatcaatct 42435033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 44353814 - 44353919
Alignment:
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| ||||||||||||   ||||||||||||||||| |||||||||| | ||||||||||  |||||||||||||||||| | |    
T  44353814 gtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacacatttgtatctc-tttgtaagaa--ctcattgatagtggattgaaaa 44353910  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  44353911 gatcaatct 44353919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 4162426 - 4162622
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttg-gtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaa-gagtagaa 98  Q
    ||||||| |||||||||||||||  |||||||| |||||||||| | |||||||||||||||||||||||| | |  | | || | ||||| | ||||||    
T  4162426 tgattagggttctcttgggttgga-aaacattgtaaacaccttgagcgagtgaaaatcattgagtgtcttgttca-ttagtgagaggaaaatgggtagaa 4162523  T
Q  99 attagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagagaacaa 196  Q
     ||||| |||||| ||| ||||||||   ||||||||||||||||| |||||||||| | ||||||||||  ||||||||||| |||||||||| | |||    
T  4162524 gttaggtttgttctttgagaacttgttgaagctaatttcttgtaactcatttgtatctc-tttgtaagaa--ctcattgatag-ggattggagatatcaa 4162619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 10929726 - 10929794
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||| | |||||||||||||||||||||||    
T  10929726 tgattagagttctcttgggttggg--aacattgtaaacaccttggattagtgaaaatcattgagtgtcttg 10929794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 1345613 - 1345421
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    ||||||||||||||||| |||||| ||| |||| ||||||||||| ||||||||||||||||| |||||||       ||||||||||||    ||| |     
T  1345613 tgattagagttctcttgagttggg-aaatattgtaaacaccttgggtgagtgaaaatcattgaatgtcttgttcatttgtgagattggga----aaatgt 1345519  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| ||||||  || |   |||||||||||||||| |||| |||||| | |||| |||||  |||||||||||||||||| |||    
T  1345518 gtagaaattagggttgttctttgtgagtttattgaagctaatttcttgtaacccatatgtatctc-tttgaaagaa--ctcattgatagtggattgaaga 1345422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 15290508 - 15290647
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaac-ttgtcatagctaatttcttgtaaccatttgt 150  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||| |||||| ||||||||||||||||||  ||||    
T  15290508 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacattgtca-agctaatttcttgtaacctcttgt 15290601  T
Q  151 atcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    || |||||||| ||||||||   ||||||||||||||||||| ||||    
T  15290602 attccttttgtaaagaactc-atttgatagtggattggagagtacaa 15290647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 15470877 - 15471016
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaac-ttgtcatagctaatttcttgtaaccatttgt 150  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||| |||||| ||||||||||||||||||  ||||    
T  15470877 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacattgtca-agctaatttcttgtaacctcttgt 15470970  T
Q  151 atcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    || |||||||| ||||||||   ||||||||||||||||||| ||||    
T  15470971 attccttttgtaaagaactc-atttgatagtggattggagagtacaa 15471016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 42575508 - 42575369
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattaggg-ttgttctt-gtgaac-ttgtcatagctaatttcttgtaaccatttgt 150  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||| |||||| | |||||| |||||| ||||||||||||||||||  ||||    
T  42575508 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggattgttcatagtgaacattgtca-agctaatttcttgtaacctcttgt 42575415  T
Q  151 atcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    || |||||||| ||||||||   ||||||||||||||||||| ||||    
T  42575414 attccttttgtaaagaactc-atttgatagtggattggagagtacaa 42575369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 1292705 - 1292514
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    ||||||||||||| |||||||||| ||||| ||  |||||||||| ||||||||||| ||||||||||       |||||||||||| ||    ||| |     
T  1292705 tgattagagttcttttgggttggg-aaacactgtgaacaccttgggtgagtgaaaattattgagtgtcttgttctttggtgagattgaga----aaatgg 1292611  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||| | |||||| |||||| |||||   ||||||||||||||||| |||||||||| | ||||||||||  ||||||||||||||||| ||||    
T  1292610 gtagaaattaagtttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctc-tttgtaagaa--ctcattgatagtggatttgaga 1292514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 18655421 - 18655526
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||| |||||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||| ||||    
T  18655421 gtagaaattaaggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattagaga 18655517  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  18655518 gatcaatct 18655526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 40221766 - 40221871
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   | |||||||||||||||| ||||||||| |||| ||||||||||   ||||||||||||||||||    
T  40221766 gtagaaattagggttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctcttt-gtaagaactcg--ttgatagtggattggaga 40221862  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  40221863 gatcaatct 40221871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 4743435 - 4743376
Alignment:
Q  11 tctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    |||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||    
T  4743435 tctcttgggttggg-aaacattgtaaacaccttgggtgagcgaaaatcattgagtgtcttg 4743376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 18106318 - 18106251
Alignment:
Q  3 attagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    |||||| ||||||||||||||| |||||||| ||||||||||| |||||||||||  ||||||||||||    
T  18106318 attagatttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaattgttgagtgtcttg 18106251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 30291663 - 30291733
Alignment:
Q  127 agctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatct 199  Q
    ||||||||||||||||| |||||||||| |||| ||||||| |||  |||||||||||||||||||| ||||||    
T  30291663 agctaatttcttgtaactcatttgtatcacttt-gtaagaattct--ttgatagtggattggagagatcaatct 30291733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 40328800 - 40328906
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-cattt-gtatcccttttgtaagaactctcattgatagtggattggag 189  Q
    |||||||||||| |||||||| |||| |||||   | ||||||||||||||| ||||| ||||| |||| ||||||||||  ||||||||||||||||||    
T  40328800 gtagaaattaggtttgttctttgtgagcttgtttaaactaatttcttgtaactcattttgtatctcttt-gtaagaactc--attgatagtggattggag 40328896  T
Q  190 agaacaatct 199  Q
    ||| ||||||    
T  40328897 agatcaatct 40328906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4733735 - 4733778
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg 45  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  4733735 tgattagagttctcttgggtt-gggaaacattgtaaacaccttgg 4733778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 199
Target Start/End: Complemental strand, 10930345 - 10930241
Alignment:
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    ||||||||||||||| |||| |||| || ||   |||||||||||||||||| |||| |||| |||| |||||||| |  ||||||||||||||||||||    
T  10930345 tagaaattagggttgctctttgtgagctcgttgaagctaatttcttgtaacccatttatatctcttt-gtaagaacac--attgatagtggattggagag 10930249  T
Q  192 aacaatct 199  Q
    | ||||||    
T  10930248 atcaatct 10930241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 190
Target Start/End: Original strand, 11384006 - 11384102
Alignment:
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| ||||||  ||||   ||||||||||||||||| |||||||||| | ||||||||||  | |||||||| |||||||||||    
T  11384006 gtagaaattagggttgttctttgtgagtttgttgaagctaatttcttgtaactcatttgtatctc-tttgtaagaa--cccattgatactggattggaga 11384102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 4743306 - 4743256
Alignment:
Q  147 ttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatct 199  Q
    ||||| ||| |||||||||||||  ||||||||||||||||||||| ||||||    
T  4743306 ttgtaacccatttgtaagaactc--attgatagtggattggagagatcaatct 4743256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 8965913 - 8965864
Alignment:
Q  23 gggaaacatt-gcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    |||||||||| | ||||||||||| |||||||||||||||||||||||||    
T  8965913 gggaaacatttgtaaacaccttgggtgagtgaaaatcattgagtgtcttg 8965864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10015074 - 10015117
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg 45  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||||    
T  10015074 tgattagagttctcttgggtt-gggaaacattgtaaacacgttgg 10015117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 10015137 - 10015199
Alignment:
Q  127 agctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagaga 192  Q
    ||||||||||||||||| |||||||||| ||||  || |||  ||||||||||||||||||||||||    
T  10015137 agctaatttcttgtaactcatttgtatctcttt--taggaa--ctcattgatagtggattggagaga 10015199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 2e-45; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 5258386 - 5258194
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||   ||||| |    
T  5258386 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaa---aaaaggg 5258291  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| || |||||||| | |||| |||||  |||||||||||||||||||||||    
T  5258290 tagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctc-tttggaagaa--ctcattgatagtggattggagag 5258194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 5260565 - 5260373
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtct-------tggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||       |||||||||||||||   ||||| |    
T  5260565 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttggtcattggtgagattgggaa---aaaaggg 5260470  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| || |||||||| | |||| |||||  |||||||||||||||||||||||    
T  5260469 tagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctc-tttggaagaa--ctcattgatagtggattggagag 5260373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 45095091 - 45095289
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||       |||||||||||||     |||||  |    
T  45095091 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgg-----gaaaatgg 45095184  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| || |||||||| | ||||||||||  |||||||||||||||||||||||    
T  45095185 tagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctc-tttgtaagaa--ctcattgatagtggattggagag 45095281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 801024 - 801218
Alignment:
Q  1 tgattagag-ttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    ||||||||| ||||||||||||||| |||||| | ||||||||||  ||| ||||||||||||||||||||||||||||||||||     || |||||||    
T  801024 tgattagagcttctcttgggttggg-aaacatgggaaacaccttgaagagagaaaatcattgagtgtcttggtgagattgggaaa-----agggtagaaa 801117  T
Q  100 ttagggttgttc-ttgtgaacttgtcatagctaatttcttgtaaccattt--gtatcccttttgtaagaactctcattgatagtggattggagagaacaa 196  Q
    |||||||||||| |||||||||||||| | |||||||||||||||  |||  ||||| |||||||||||||||  |||||||||||||||||||| ||||    
T  801118 ttagggttgttcattgtgaacttgtcaaatctaatttcttgtaactctttttgtatctcttttgtaagaactc--attgatagtggattggagagtacaa 801215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 37408385 - 37408584
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||       ||||||||||||||    ||| |    
T  37408385 tgattagagttctcttgggttggg-aaacattgtaaacaccttagtgagtgaaaattattgagtgtcttgttcattggtgagattgggaaa----aaggg 37408479  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| | ||||||||||  |||||||||||||||||| ||||    
T  37408480 tagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctc-tttgtaagaa--ctcattgatagtggattgaagag 37408576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 35 - 191
Target Start/End: Complemental strand, 7780204 - 7780054
Alignment:
Q  35 aaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggttgttc-ttgtgaacttgtcatagctaat 133  Q
    ||||||||||  ||| ||||||||||||||||||| ||||||||||||||     || ||||||||||||||||||| |||||||||||||| | |||||    
T  7780204 aaacaccttgaagagagaaaatcattgagtgtcttcgtgagattgggaaa-----agggtagaaattagggttgttcattgtgaacttgtcaaatctaat 7780110  T
Q  134 ttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    ||||||||||| |||||||| ||||||||||||  |||||||||||||||||||||||    
T  7780109 ttcttgtaaccttttgtatctcttttgtaagaa--ctcattgatagtggattggagag 7780054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 19684131 - 19683931
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||||       ||||||||||||||    | |     
T  19684131 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgaatgtcttgttcatttgtgagattgggaaa----atgg 19684037  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| | ||||||||||  ||||||||||||||||||||||    
T  19684036 gtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctc-tttgtaagaa--ctcattgatagtggattggaga 19683940  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  19683939 gatcaatct 19683931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 9636369 - 9636176
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggt-------gagattgggaaatgaaaaga 92  Q
    |||||||||| |||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||       ||||||||||   ||||||     
T  9636369 tgattagagtctctcttgggttggg-aaatattgtaaacaccttggtgagtgaaaatcattgagtgtcttggtcattggtgagattggga---gaaaagg 9636274  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||||||||||| | |||||||||||||| || ||||||| | |||||||||||  ||||||||||||||||||||||    
T  9636273 gtagaaattagggttgttctttgtgaacttgtcaaaactaatttcttgtaacccttttgtat-ctttttgtaagaa--ctcattgatagtggattggaga 9636177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 6716434 - 6716622
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||   || || |||||||||||||||||||||||||||||||     || |||||||    
T  6716434 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtaaagagagaatcattgagtgtcttggtgagattgggaaa-----agggtagaaa 6716526  T
Q  100 ttagggtt-gttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagagaacaa 196  Q
    |||||||| |||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  6716527 ttagggtttgttcattgtgaacttgtca-agctaatttcttgtaaccttttgtatcccttttgtaagaactct--ttgatagtggattggagagtacaa 6716622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 54635059 - 54635247
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||   || || |||||||||||||||||||||||||||||||     || |||||||    
T  54635059 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtaaagagagaatcattgagtgtcttggtgagattgggaaa-----agggtagaaa 54635151  T
Q  100 ttagggtt-gttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagagaacaa 196  Q
    |||||||| |||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  54635152 ttagggtttgttcattgtgaacttgtca-agctaatttcttgtaaccttttgtatcccttttgtaagaactct--ttgatagtggattggagagtacaa 54635247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 40734424 - 40734624
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||       |||||||||||||||    ||| |     
T  40734424 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggga----aaatgg 40734518  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| |||||| |||||   | ||||||||||||||| |||||||||||| ||||||||||  ||||||||||||||||||||||    
T  40734519 gtagaaattagggttgttctttgtgagcttgttgaacctaatttcttgtaacacatttgtatccc-tttgtaagaa--ctcattgatagtggattggaga 40734615  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  40734616 gatcaatct 40734624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 7762192 - 7762391
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtctt-------ggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| ||| ||||  ||||||||||||||||||||||||||||||||||       |||||||||| ||||    ||| |    
T  7762192 tgattagagttctcttgggttggg-aaatattgtgaacaccttggtgagtgaaaatcattgagtgtcttattcattggtgagattgagaaa----aaggg 7762286  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||||| ||||||||||   ||||||||||||||||| | |||||||| |||| ||||||||||  ||||||||||||||||||||    
T  7762287 tagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaactcttttgtatctcttt-gtaagaactc--attgatagtggattggagag 7762383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 7764394 - 7764583
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgg-gaaatg-aaaagagtagaa 98  Q
    |||||||| |||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||| | |  |||| || | | ||||| ||||||    
T  7764394 tgattagatttctcttgggttagg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttca--ttggtgagagggaaaagggtagaa 7764490  T
Q  99 attagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagaga 192  Q
    ||||||||||||| |||||||||||| | ||||||||||||||||| | |||||||| | ||||||||||  ||||||||||||||||||||||||    
T  7764491 attagggttgttctttgtgaacttgttaaagctaatttcttgtaactcttttgtatctc-tttgtaagaa--ctcattgatagtggattggagaga 7764583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 23200379 - 23200188
Alignment:
Q  1 tgattagagtt-ctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgt------cttggtgagattgggaaatgaaaagag 93  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||      ||||||||||||||||    ||||  |    
T  23200379 tgattagagtttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcttggtgagattggga----aaaatgg 23200285  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||| || ||||||| | |||||||||||  ||||||||||||| |||||||||    
T  23200284 tagaaattagagttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtat-ctttttgtaagaa--ctcattgatagtgaattggagag 23200188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 5236698 - 5236497
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||       |||||||||||||||    ||| |     
T  5236698 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggga----aaatgg 5236604  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| ||||||||||||   |||||||||||||||| ||||||||||| | ||||||||||  |||||||||| |||||| ||||    
T  5236603 gtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctc-tttgtaagaa--ctcattgataatggattcgaga 5236507  T
Q  191 gaacaatctt 200  Q
    || |||||||    
T  5236506 gatcaatctt 5236497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 39153603 - 39153403
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||||||       ||||||||||||||    | |     
T  39153603 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgaatgaaaatcattgagtgtcttgttcatgtgtgagattgggaaa----atgg 39153509  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||| |||||| |||||| |||||   ||||||||||||||||| |||||||||||||||  |||||||||  |||||||||||||||||||    
T  39153508 gtagaaattaggtttgttcattgtgagcttgtttaagctaatttcttgtaactcatttgtatcccttta-taagaactc--attgatagtggattggaga 39153412  T
Q  191 gaacaatct 199  Q
    |||||||||    
T  39153411 gaacaatct 39153403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 23198180 - 23197989
Alignment:
Q  1 tgattagagtt-ctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgt------cttggtgagattgggaaatgaaaagag 93  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||      ||||||||||||||||    ||||  |    
T  23198180 tgattagagtttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcttggtgagattggga----aaaatgg 23198086  T
Q  94 tagaaattagggttg-ttcttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||| |||| || |||||||||||||| |||||||||||||||| || ||||||| | |||||||||||  ||||||||||||| |||||||||    
T  23198085 tagaaattagagttgttttttgtgaacttgtcaaagctaatttcttgtaacccttttgtat-ctttttgtaagaa--ctcattgatagtgaattggagag 23197989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 760773 - 760973
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||  ||||||||||| |||||||||||||||||||||||||       ||||||||||||    ||| |     
T  760773 tgattagagttctcttgggttggg-aaacattataaacaccttggatgagtgaaaatcattgagtgtcttgttcatttgtgagattggga----aaatgg 760867  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||  ||||| |||||| |||||   |||||||||||||||| ||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  760868 gtagaaattaggtctgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccc-tttgtaagaa--ctcattgatagtggattggaga 760964  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  760965 gatcaatct 760973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 22835244 - 22835044
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    ||||||||||||||||| |||||| |||||||| || |||||||| |||||||||||||||||||||||||       ||||||||||||||    | |     
T  22835244 tgattagagttctcttgtgttggg-aaacattgtaatcaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgggaaa----atgg 22835150  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||| |||||||| |||| |||||   |||||||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||||||    
T  22835149 gtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt-gtaagaactc--attgatagtggattggaga 22835053  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  22835052 gatcaatct 22835044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 29682285 - 29682485
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||       ||||||||||||    ||| |     
T  29682285 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgtttatttgtgagattggga----aaatgg 29682379  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgt-aaccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||| | |||||| |||||| |||||   |||||||||||||| | ||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  29682380 gtagaaattatgtttgttctttgtgagcttgtttaagctaatttcttgtcacccatttgtatccc-tttgtaagaa--ctcattgatagtggattggaga 29682476  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  29682477 gatcaatct 29682485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 44331471 - 44331671
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||       ||||||||||| |||    ||| |     
T  44331471 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattagga----aaatgg 44331565  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| |||||| |||||   |||||||||||||||| ||||||||||| | ||||||||||  || |||||||||||||||||||    
T  44331566 gtagaaattagggttgttcattgtgagcttgttgaagctaatttcttgtaagccatttgtatctc-tttgtaagaa--cttattgatagtggattggaga 44331662  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  44331663 gatcaatct 44331671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 9581209 - 9581408
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttggtgagattgggaaat--gaaaagagtaga 97  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||| | |  |  || | |  |||| | |||||    
T  9581209 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgggattcggaaatgggtaga 9581307  T
Q  98 aattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagagaaca 195  Q
    ||||||| |||||| |||||| |||||   |||||||||||| ||| ||||||||||||| ||||||||||  |||||||||||||||||||||||| ||    
T  9581308 aattaggtttgttctttgtgagcttgtttaagctaatttcttttaacccatttgtatccc-tttgtaagaa--ctcattgatagtggattggagagatca 9581404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 45282917 - 45283112
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||   || || |||||||||||||||||||||||||||||||     || |||||||    
T  45282917 tgattagagtatctcttgggttga--aaacatgggaaacaccttgcaaagagagaatcattgagtgtcttggtgagattgggaaa-----agggtagaaa 45283009  T
Q  100 ttagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgtatccc---ttttgtaagaactctcattgatagtggattggagagaac 194  Q
    |||||||| |||| | |||||||||||| |||||||||||||||||| ||||||||||   ||||||||||||||   ||||||||||||||||||| ||    
T  45283010 ttagggtttgttcatagtgaacttgtca-agctaatttcttgtaaccttttgtatccctttttttgtaagaactc-atttgatagtggattggagagtac 45283107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 51398740 - 51398933
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttggt-------gagattgggaaatgaaaaga 92  Q
    ||||||||||| |||||||||||| ||| |||| ||||||||||| ||||||||||||||||||||||||| |       |||||||| |||    | |     
T  51398740 tgattagagttttcttgggttggg-aaatattgtaaacaccttggatgagtgaaaatcattgagtgtcttgttcattgatgagattggaaaa----atgg 51398834  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| ||||||||||   ||||||||||||||||| |||||||||| |||| ||||||||||  |||||||||||||||||||    
T  51398835 gtagaaattagggttgttcttagtgaacttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactc--attgatagtggattggaga 51398931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 29810794 - 29810994
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtctt-------ggtgagattgggaaatgaaaaga 92  Q
    ||||||||||||| |||||||||| |||||||| ||||||||||| ||||||||||||||||| ||||||       ||||||||| |||||  |         
T  29810794 tgattagagttcttttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgaatgtcttattcattggtgagattaggaaaatat---- 29810888  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||| ||||||||| ||||||||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  29810889 gtagaaattagagttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 29810985  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  29810986 gatcaatct 29810994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 29196622 - 29196428
Alignment:
Q  9 gttctcttgggttggggaaacatt-gcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||||||||| ||||||| | ||||||||||| |||||||||||||||||||||||||       ||||||||||||||    | | |||||||    
T  29196622 gttctcttgggttggg-aaacatttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa----atgggtagaaa 29196528  T
Q  100 ttagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagagaacaa 196  Q
    |||||||| |||||| |||| ||||||| ||||||||||||| |||| ||||||||| |||| ||||||||||  ||||||||||||||||||||| |||    
T  29196527 ttagggtttgttctttgtgagcttgtcaaagctaatttcttggaacccatttgtatctcttt-gtaagaactc--attgatagtggattggagagatcaa 29196431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 31314379 - 31314569
Alignment:
Q  9 gttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagtagaaat 100  Q
    |||||||||||||||| |||||||| |||||| |||| |||||||||||||||||||||||||       ||||||||| ||||    | | ||||||||    
T  31314379 gttctcttgggttggg-aaacattgtaaacactttgggtgagtgaaaatcattgagtgtcttgttcataggtgagattgagaaa----atgggtagaaat 31314473  T
Q  101 tagggttgttc-ttgtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagagaacaat 197  Q
    ||||||||||| |||||| |||||   |||||||||||||||||| |||||||||  |||||||||||||||  |||||||||||||||||||| ||||    
T  31314474 tagggttgttcattgtgatcttgttgaagctaatttcttgtaacccatttgtatct-ttttgtaagaactct--ttgatagtggattggagagatcaat 31314569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 32744668 - 32744485
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaat 100  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||| | || ||||||||  ||||  ||| | ||||||||    
T  32744668 tgattagagttctcttgggttggg-aaacattgtaaacacattggtgagtgaaaatcattgagtat-tttgtgagatt--gaaa--aaatgggtagaaat 32744575  T
Q  101 tagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagaga 192  Q
    || | |||||| |||||| |||||   ||||||||||||||||| |||||||||| | ||||||||||||||  |||||||||||||| |||||    
T  32744574 ta-gtttgttctttgtgagcttgtttaagctaatttcttgtaactcatttgtatcac-tttgtaagaactct--ttgatagtggattgaagaga 32744485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 3617383 - 3617576
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||   || || ||||||||||||||||||||||||||||||| |      |||||||    
T  3617383 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtaaagagagaatcattgagtgtcttggtgagattgggaaaggg-----gtagaaa 3617475  T
Q  100 ttagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    |||||||| |||| | |||||||||||| ||||||||||||||||||  ||||||||||||||| ||||||||   ||||||||||||||||||| ||||    
T  3617476 ttagggtttgttcatagtgaacttgtca-agctaatttcttgtaacctcttgtatcccttttgtaaagaactc-atttgatagtggattggagagtacaa 3617573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 44700713 - 44700520
Alignment:
Q  9 gttctcttgggttggggaaacatt-gcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||||||||| ||||||| | ||||||||||| |||||||||||||||||||||||||       ||||||||||||||    | | |||||||    
T  44700713 gttctcttgggttggg-aaacatttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa----atgggtagaaa 44700619  T
Q  100 ttagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagagaacaat 197  Q
    |||||||||||||| ||||  ||||   |||||||||||||||||| ||||||||| |||| |||||||||||  |||||||||||||||||||| ||||    
T  44700618 ttagggttgttctttgtgagtttgttgaagctaatttcttgtaacctatttgtatctcttt-gtaagaactct--ttgatagtggattggagagatcaat 44700522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 54 - 199
Target Start/End: Original strand, 25637412 - 25637553
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgta 151  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||||||||| ||||||||||||||||||  |||||    
T  25637412 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacttgtca-agctaatttcttgtaacctcttgta 25637505  T
Q  152 tcccttttgt-aagaactctcattgatagtggattggagagaacaatct 199  Q
    |||||||||| ||||||||   ||||||||||||||||||| |||||||    
T  25637506 tcccttttgtaaagaactc-atttgatagtggattggagagtacaatct 25637553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 40735309 - 40735509
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtga-gtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||| |||||||||||||| || |||||||| |||||||||||  | ||||||||||||||||||||||       ||||||||| ||||    | |     
T  40735309 tgattaaagttctcttgggttagg-aaacattgtaaacaccttggaaaagtgaaaatcattgagtgtcttgttcattggtgagattgagaaa----atgg 40735403  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacca-tttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   ||||||||| ||||||||| |||||||| |||| ||||||||||  |||||||||||||||||||    
T  40735404 gtagaaattagggttgttctttgtgagcttgttgaagctaatttattgtaaccagtttgtatctcttt-gtaagaactc--attgatagtggattggaga 40735500  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  40735501 gatcaatct 40735509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 53921745 - 53921545
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    ||||||| ||| |||||||||||  |||||||| ||| ||||||| |||||||||||||||||||||||||       |||||||||| |||    | |     
T  53921745 tgattagggttttcttgggttgga-aaacattgtaaaaaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaaaa----atgg 53921651  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||| ||||| || |||| ||||| | ||||||||||||||||| ||||||||||  ||||||||||||||  |||||||||||||||||||    
T  53921650 gtagaaattaggtttgttgtttgtgagcttgttaaagctaatttcttgtaactcatttgtatca-ttttgtaagaactc--attgatagtggattggaga 53921554  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  53921553 gatcaatct 53921545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 16498956 - 16499155
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtg-agtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||| ||||| | |||||||| ||||||||||| | |||||||||||||||||||||||       ||||||||||||||    | |     
T  16498956 tgattagagttctcttaggttgag-aaacattgtaaacaccttggggtagtgaaaatcattgagtgtcttgttcatttgtgagattgggaaa----acgg 16499050  T
Q  93 gtagaaattagggttgttcttgtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
     ||||||||||||||||| |||| | |||||   |||||||||||||| ||| |||| |||| |||| ||||||||||  ||||||||||||||||||||    
T  16499051 atagaaattagggttgtttttgtaagcttgttgaagctaatttcttgttacccatttatatctcttt-gtaagaactc--attgatagtggattggagag 16499147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 30 - 199
Target Start/End: Original strand, 4569906 - 4570078
Alignment:
Q  30 attgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagtagaaattagggttgttc-ttgtgaact 120  Q
    |||| ||||||||||| ||||||||||||||||||||| |||       ||||||||||||||    | | ||||||||||||||||||| |||||| ||    
T  4569906 attgtaaacaccttgggtgagtgaaaatcattgagtgttttgttctttggtgagattgggaaa----atgggtagaaattagggttgttcattgtgagct 4570001  T
Q  121 tgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatct 199  Q
    | |   ||||||||||||||||| |||||||||| |||| ||||||||||  ||||||||||||||||||||| ||||||    
T  4570002 tattgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactc--attgatagtggattggagagatcaatct 4570078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 29812989 - 29813189
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||| ||||||||||||||||| || ||||| |||||| |||| |||||||||||||||||| | ||||       |||||||||| |||   | ||     
T  29812989 tgattaaagttctcttgggttggg-aagcattgtaaacacattgggtgagtgaaaatcattgaggggcttgttaattggtgagattggaaaa---atag- 29813083  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| ||||||||||   |||||||||||||||||| ||||| ||| |||| ||||||||||  ||| |||||||||||||||    
T  29813084 gtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgcatctcttt-gtaagaactc--atttatagtggattggaga 29813180  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  29813181 gatcaatct 29813189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 30236146 - 30236251
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  30236146 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctcttt-gtaagaactc--attgatagtggattggaga 30236242  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  30236243 gatcaatct 30236251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 34491233 - 34491338
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   ||||||||||||||||| |||||||||| |||| ||||||||||  |||||||||||||||||||    
T  34491233 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactc--attgatagtggattggaga 34491329  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  34491330 gatcaatct 34491338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 4600928 - 4600789
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaac-ttgtcatagctaatttcttgtaaccatttgt 150  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||| |||||| |||||||||||||||||| |||||    
T  4600928 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacattgtca-agctaatttcttgtaaccttttgt 4600835  T
Q  151 atcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    || |||||||| ||||||||   ||||||||||||||||||| ||||    
T  4600834 attccttttgtaaagaactc-atttgatagtggattggagagtacaa 4600789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 6095767 - 6095641
Alignment:
Q  68 ttggtgagattgggaaatgaaaagagtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaaga 165  Q
    |||||||||||||||||    | ||||||||||||||||||||||| || ||||| |   || ||||||||||||||| ||||||||| |||| ||||||    
T  6095767 ttggtgagattgggaaa----atgagtagaaattagggttgttctttgtaaacttcttgaagttaatttcttgtaacccatttgtatctcttt-gtaaga 6095673  T
Q  166 actctcattgatagtggattggagagaacaatct 199  Q
    ||||  ||||||||||||||||||||| ||||||    
T  6095672 actc--attgatagtggattggagagatcaatct 6095641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 46173378 - 46173483
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| ||||||| ||  |||||||||||||||||||    
T  46173378 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaattc--attgatagtggattggaga 46173474  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  46173475 gatcaatct 46173483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 144
Target Start/End: Complemental strand, 5434091 - 5433971
Alignment:
Q  30 attgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagagtagaaattaggg-ttgttc-ttgtgaact 120  Q
    |||| |||||||||||||||||||||||||||||||||       |||||||||||||||   |||||  ||||||||||||| |||||| |||||| ||    
T  5434091 attgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattggga---gaaaatggtagaaattagggtttgttctttgtgagct 5433995  T
Q  121 tgtcatagctaatttcttgtaacc 144  Q
    ||| | ||||||||||||||||||    
T  5433994 tgttaaagctaatttcttgtaacc 5433971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 23392143 - 23391958
Alignment:
Q  9 gttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagagtagaaat 100  Q
    |||||||||||||||| |||||||| ||||||||||| ||||||||||||||| ||||||       |||||||| ||||||    ||| ||||||||||    
T  23392143 gttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcatttagtgtctttttcattggtgagtttggga----aaatgagtagaaat 23392049  T
Q  101 tagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagaga 192  Q
    || | |||||| |||||| |||||   || ||||||||||||| ||||||||||| | |||| |||||||||  |||||||||||||| |||||    
T  23392048 taagtttgttctttgtgagcttgtttaagataatttcttgtaacccatttgtatcac-tttgcaagaactct--ttgatagtggattgtagaga 23391958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 199
Target Start/End: Original strand, 54593727 - 54593830
Alignment:
Q  95 agaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagaga 192  Q
    ||||||||||||||||||| |||| |||||   ||||||||| |||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||||    
T  54593727 agaaattagggttgttctttgtgagcttgttgaagctaatttattgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggagaga 54593823  T
Q  193 acaatct 199  Q
     ||||||    
T  54593824 tcaatct 54593830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 4598707 - 4598568
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaac-ttgtcatagctaatttcttgtaaccatttgt 150  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||| |||||| ||||||||||||||||||  ||||    
T  4598707 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacattgtca-agctaatttcttgtaacctcttgt 4598614  T
Q  151 atcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    || |||||||| ||||||||   ||||||||||||||||||| ||||    
T  4598613 attccttttgtaaagaactc-atttgatagtggattggagagtacaa 4598568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 10056203 - 10056342
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaac-ttgtcatagctaatttcttgtaaccatttgt 150  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||| |||||| ||||||||||||||||||  ||||    
T  10056203 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacattgtca-agctaatttcttgtaacctcttgt 10056296  T
Q  151 atcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    || |||||||| ||||||||   ||||||||||||||||||| ||||    
T  10056297 attccttttgtaaagaactc-atttgatagtggattggagagtacaa 10056342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 10058425 - 10058564
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaac-ttgtcatagctaatttcttgtaaccatttgt 150  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||| |||||| ||||||||||||||||||  ||||    
T  10058425 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacattgtca-agctaatttcttgtaacctcttgt 10058518  T
Q  151 atcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    || |||||||| ||||||||   ||||||||||||||||||| ||||    
T  10058519 attccttttgtaaagaactc-atttgatagtggattggagagtacaa 10058564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 10060647 - 10060786
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaac-ttgtcatagctaatttcttgtaaccatttgt 150  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||| |||||| ||||||||||||||||||  ||||    
T  10060647 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacattgtca-agctaatttcttgtaacctcttgt 10060740  T
Q  151 atcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    || |||||||| ||||||||   ||||||||||||||||||| ||||    
T  10060741 attccttttgtaaagaactc-atttgatagtggattggagagtacaa 10060786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 10062869 - 10063008
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaac-ttgtcatagctaatttcttgtaaccatttgt 150  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||| |||||| ||||||||||||||||||  ||||    
T  10062869 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacattgtca-agctaatttcttgtaacctcttgt 10062962  T
Q  151 atcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    || |||||||| ||||||||   ||||||||||||||||||| ||||    
T  10062963 attccttttgtaaagaactc-atttgatagtggattggagagtacaa 10063008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 10065091 - 10065230
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaac-ttgtcatagctaatttcttgtaaccatttgt 150  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||| |||||| ||||||||||||||||||  ||||    
T  10065091 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacattgtca-agctaatttcttgtaacctcttgt 10065184  T
Q  151 atcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    || |||||||| ||||||||   ||||||||||||||||||| ||||    
T  10065185 attccttttgtaaagaactc-atttgatagtggattggagagtacaa 10065230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 10211379 - 10211518
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaac-ttgtcatagctaatttcttgtaaccatttgt 150  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||| |||||| ||||||||||||||||||  ||||    
T  10211379 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacattgtca-agctaatttcttgtaacctcttgt 10211472  T
Q  151 atcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    || |||||||| ||||||||   ||||||||||||||||||| ||||    
T  10211473 attccttttgtaaagaactc-atttgatagtggattggagagtacaa 10211518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 46860495 - 46860601
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||| |||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| |||| |||||  |||||||||||||||||||    
T  46860495 gtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaataactc--attgatagtggattggaga 46860591  T
Q  191 gaacaatctt 200  Q
    || |||||||    
T  46860592 gatcaatctt 46860601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 32891029 - 32891223
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtctt-------ggtgagattgggaaatgaaaaga 92  Q
    ||||||| ||||||||||| |||| |||||||| ||||||||||| ||||| ||||||||||||||||||       |||||||||| ||    ||| |     
T  32891029 tgattagggttctcttggggtggg-aaacattgtaaacaccttgggtgagtaaaaatcattgagtgtcttgttcttcggtgagattgaga----aaatgg 32891123  T
Q  93 gtagaaatt-agggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
    ||||||||| ||  |||||| |||||| |||||   ||||||||||||||||| |||||||||| | ||||||||||  ||| |||||||||||||||||    
T  32891124 gtagaaattaagttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctc-tttgtaagaa--ctcgttgatagtggattggag 32891220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 10209159 - 10209298
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattaggg-ttgttc-ttgtgaac-ttgtcatagctaatttcttgtaaccatttgt 150  Q
    |||||||||||||||||||||||||||     |||| | ||||||||||||| |||||| | |||||| |||||| ||||||||||||||||||  ||||    
T  10209159 aatcattgagtgtcttggtgagattgg-----gaaaggggtagaaattagggtttgttcatagtgaacattgtca-agctaatttcttgtaacctcttgt 10209252  T
Q  151 atcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    |  |||||||| ||||||||   ||||||||||||||||||| ||||    
T  10209253 agtccttttgtaaagaactc-atttgatagtggattggagagtacaa 10209298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 23410563 - 23410502
Alignment:
Q  9 gttctcttgggttggggaaacattgcaaacaccttg-gtgagtgaaaatcattgagtgtcttg 70  Q
    |||||||||||||||  |||||||| |||||||||| ||||||||||||||||||||||||||    
T  23410563 gttctcttgggttgga-aaacattgtaaacaccttgagtgagtgaaaatcattgagtgtcttg 23410502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 163
Target Start/End: Original strand, 10067313 - 10067419
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattaggg-ttgttc-ttgtgaac-ttgtcatagctaatttcttgtaaccatttgt 150  Q
    |||||||||||||||||||||||||||     |||| | ||||||||||||| |||||| | |||||| |||||| ||||||||||||||||||  ||||    
T  10067313 aatcattgagtgtcttggtgagattgg-----gaaaggggtagaaattagggtttgttcatagtgaacattgtca-agctaatttcttgtaacctcttgt 10067406  T
Q  151 atcccttttgtaa 163  Q
    || ||||||||||    
T  10067407 attccttttgtaa 10067419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 49199617 - 49199518
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacca--tttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
    |||||||||| |||||||||| |||| |||||   ||||||||||||||||||   |||||||| |||| ||||||||||  ||||||||||||||||||    
T  49199617 gtagaaattaaggttgttctttgtgagcttgttgaagctaatttcttgtaacccattttgtatctcttt-gtaagaactc--attgatagtggattggag 49199521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 6718618 - 6718700
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaa 84  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||   || || |||||||||||||||||||||||||||||||    
T  6718618 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtaaagagagaatcattgagtgtcttggtgagattgggaaa 6718700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 190
Target Start/End: Complemental strand, 43401949 - 43401852
Alignment:
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-ca-tttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
    ||||||||||||||||||| |||||| |||||   ||||||||||||||||| || ||| |||| | ||||||||||  |||||||||||||||||||||    
T  43401949 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacgcattttttatctc-tttgtaagaa--ctcattgatagtggattggag 43401853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 70
Target Start/End: Complemental strand, 2075265 - 2075230
Alignment:
Q  35 aaacaccttggtgagtgaaaatcattgagtgtcttg 70  Q
    |||||||||| |||||||||||||||||||||||||    
T  2075265 aaacaccttgctgagtgaaaatcattgagtgtcttg 2075230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 9666710 - 9666640
Alignment:
Q  1 tgattagagttctcttgggttggggaaacatt-gcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    ||||||| ||||||||  |||||| ||||||| | ||||||||||| |||||||||||||||||||||||||    
T  9666710 tgattagggttctcttcagttggg-aaacatttgtaaacaccttgggtgagtgaaaatcattgagtgtcttg 9666640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 40913352 - 40913419
Alignment:
Q  130 taatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatct 199  Q
    |||||||||||||| |||||||||| |||| ||||||||||  || |||||||||||||||||| ||||||    
T  40913352 taatttcttgtaactcatttgtatctcttt-gtaagaactc--atcgatagtggattggagagatcaatct 40913419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 41819670 - 41819565
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc--atttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
    |||||||||||||||||| || |||| ||||||  ||||||||||||||||||   |||||||| | ||||||||||  |||||| ||||||||||||||    
T  41819670 gtagaaattagggttgttttttgtgagcttgtctaagctaatttcttgtaacccattttgtatctc-tttgtaagaa--ctcatt-atagtggattggag 41819575  T
Q  190 agaacaatct 199  Q
    | | ||||||    
T  41819574 acatcaatct 41819565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 26386723 - 26386654
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    |||||||||||||||| ||||||| |||||  | ||| || |||| |||||||||||||||||||||||||    
T  26386723 tgattagagttctcttaggttggg-aaacagggtaaatactttgggtgagtgaaaatcattgagtgtcttg 26386654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 47304272 - 47304377
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||| |||||||||| |||| |||||   || |||| |||||||||| || |||||| |||  ||||||||||  |||||||||||||||||||    
T  47304272 gtagaaattatggttgttctttgtgagcttgttgaagttaatatcttgtaacccatctgtatctcttc-gtaagaactc--attgatagtggattggaga 47304368  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  47304369 gatcaatct 47304377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 55302079 - 55302014
Alignment:
Q  132 atttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatct 199  Q
    ||||||||||||| ||||||||| |||| ||||||| ||  ||||||||||||||||||||| ||||||    
T  55302079 atttcttgtaacctatttgtatctcttt-gtaagaattc--attgatagtggattggagagatcaatct 55302014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 7e-45; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 4484573 - 4484380
Alignment:
Q  1 tgattagag-ttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg------gtgagattgggaaatgaaaagag 93  Q
    ||||||||| ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||      |||| |||||||   |||||| |    
T  4484573 tgattagagcttctcttgggttggg-aaacattgtaaacaccttggtgagtgtaaatcattgagtgtcttgttcttggtgaaattggga---gaaaaggg 4484478  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| ||||||||||||  |||||||||||||||||||||||    
T  4484477 tagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttttgtaagaa--ctcattgatagtggattggagag 4484380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 6266625 - 6266817
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||  ||| ||||||||||||||||||||||||||||||||||     || |||||||    
T  6266625 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtagagagaaaatcattgagtgtcttggtgagattgggaaa-----agggtagaaa 6266717  T
Q  100 ttagggtt-gttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagagaacaat 197  Q
    |||||||| |||| |||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  6266718 ttagggtttgttcattgtgaacttgtcaaatctaatttcttgtaaccttttgtatcccttttgtaagaactct--ttgatagtggattggagagtacaat 6266815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 29867795 - 29867995
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||       ||||||||||||||    | |     
T  29867795 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa----atgg 29867889  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||  ||||||||||||||||||    
T  29867890 gtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctc-tttgtaagaactct--ttgatagtggattggaga 29867986  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  29867987 gatcaatct 29867995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 45099681 - 45099872
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||   ||||| |    
T  45099681 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaa---aaaaggg 45099776  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||| | |||||||| ||||   |||||  |||||||||||||||||||||||    
T  45099777 tagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaactcttttgtatctcttt--gaagaa--ctcattgatagtggattggagag 45099872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 5723496 - 5723298
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgg-gaaat---gaaaagagtag 96  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |   ||||| || ||   |||||| ||||    
T  5723496 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgtt--cattggtgagattgagaaaagggtag 5723400  T
Q  97 aaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagagaac 194  Q
    |||||||| |||||| |||||||||||||| ||||||||||||||||||  |||||||| | ||||||||||  |||||||||||||||||||||||| |    
T  5723399 aaattaggcttgttctttgtgaacttgtcaaagctaatttcttgtaacctttttgtatctc-tttgtaagaa--ctcattgatagtggattggagagatc 5723303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 32289498 - 32289690
Alignment:
Q  1 tgattagag-ttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    ||||||||| |||||||||||| || |||||| | |||||||||||||||||||||||||||||||||||||||||||||      |||||| |||||||    
T  32289498 tgattagagcttctcttgggtttgg-aaacatggtaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattg------gaaaagggtagaaa 32289590  T
Q  100 ttagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagagaacaat 197  Q
    |||||||||||| |||||||||||||| | ||||||||||||||| | |||||||| ||||||||||||  ||||||||||||  ||| |||||| ||||    
T  32289591 ttagggttgttctttgtgaacttgtcaaatctaatttcttgtaactcttttgtatctcttttgtaagaa--ctcattgatagtaaattagagagatcaat 32289688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 30833271 - 30833464
Alignment:
Q  1 tgattagag-ttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg------gtgagattgggaaatgaaaagag 93  Q
    ||||||||| || |||||||||||| |||||||| |||||| |||||||||| ||||||||||||||||||      ||||||||||||   |||||| |    
T  30833271 tgattagagcttatcttgggttggg-aaacattgtaaacactttggtgagtgtaaatcattgagtgtcttgttcttggtgagattggga---gaaaaggg 30833366  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||| || |||||||| ||||||||||||  |||||||||||||||||||||||    
T  30833367 tagaaattagggttgttctttgtgaacttgtcaaagttaatttcttgtaacccttttgtatctcttttgtaagaa--ctcattgatagtggattggagag 30833464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 34140013 - 34139812
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||       ||||||||| ||||    | |     
T  34140013 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgagaaa----atgg 34139919  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   |||||||||||||||||| || ||||||||||||||||||||||  |||||||||||||||||||    
T  34139918 gtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccatatgtatcccttttgtaagaactc--attgatagtggattggaga 34139821  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  34139820 gatcaatct 34139812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 4503374 - 4503183
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||       |||| |||||||||||   ||||  |    
T  4503374 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggagagattgggaa---aaaatgg 4503279  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||| | |||||||| ||||   |||||  |||||||||||||||||||||||    
T  4503278 tagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaactcttttgtatctcttt--gaagaa--ctcattgatagtggattggagag 4503183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 2334659 - 2334460
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||    ||| | |    
T  2334659 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattggga----aaatggg 2334565  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    ||||||| |||||||||| ||||||||||||   ||||||||||| ||||| | |||||||| | ||||||||||  |||||||||||||||||||||||    
T  2334564 tagaaataagggttgttctttgtgaacttgttgaagctaatttctagtaactcttttgtatctc-tttgtaagaa--ctcattgatagtggattggagag 2334468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 36988317 - 36988118
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||       |||||| |||||| |    ||||| |    
T  36988317 tgattagagttctcttgggttggg-aaacatagtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgggattggaa----aaaaggg 36988223  T
Q  94 tagaaattagggttgttct-tgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    ||||||||||||||||||| ||||| ||||||| | ||||||||||||||| | |||||||| | ||||||||||  |||||||||||||||||||||||    
T  36988222 tagaaattagggttgttctatgtgagcttgtcaaaactaatttcttgtaactcttttgtatctc-tttgtaagaa--ctcattgatagtggattggagag 36988126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 42362278 - 42362471
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||       ||||||||||||    ||| |     
T  42362278 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattggga----aaatgg 42362372  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||| |||||| |||||| |||||   |||||||||||||||| ||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  42362373 gtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccc-tttgtaagaa--ctcattgatagtggattggaga 42362469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 14634068 - 14633867
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    ||||||||||||| |||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||       |||||||||| |||    | |     
T  14634068 tgattagagttcttttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattggtaaa----atgg 14633974  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||| |||||||| |||| |||||   |||||||||||||||||| ||||||||||||||||||||||  ||||| ||||||||||||||||    
T  14633973 gtagaaattaggattgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttttgtaagaa--ctcatagatagtggattggaga 14633876  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  14633875 gatcaatct 14633867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 38312166 - 38312366
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttg-gtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||       ||||||||||||||    | |     
T  38312166 tgattagagttctcttgggttggg-aaacattgtatacaccttgtgtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa----atgg 38312260  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| ||||||||||   | |||||||||||||||| ||||||||| |||| ||||||  |||||||||||||||||||||||    
T  38312261 gtagaaattagggttgttctttgtgaacttgttgaaactaatttcttgtaacccatttgtatctcttt-gtaaga--tctcattgatagtggattggaga 38312357  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  38312358 gatcaatct 38312366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 36205905 - 36205760
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||       |||||||||||||||    ||||  |    
T  36205905 tgattagagttctcttgggttggg-aaacatggtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattggga----aaaatgg 36205811  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac 143  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  36205810 tagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaac 36205760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 723986 - 723786
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttggtgagattgggaaat--gaaaa--gagta 95  Q
    ||||||||||||| |||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||| | |  ||| || ||  |||||  | |||    
T  723986 tgattagagttcttttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcat-ttgtgagattggaaaactgggta 723889  T
Q  96 gaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagagaa 193  Q
    ||||||||| |||||||| |||| |||||   |||||||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||||||||     
T  723888 gaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt-gtaagaactc--attgatagtggattggagagat 723792  T
Q  194 caatct 199  Q
    ||||||    
T  723791 caatct 723786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 11690427 - 11690620
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||| ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||       ||||||||||||    ||| |     
T  11690427 tgattatagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattggga----aaatgg 11690521  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||| |||||| |||||| |||||   |||||||||||||||| ||||||||||||| ||||||||||   || ||||||||||||||||||    
T  11690522 gtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccc-tttgtaagaa--atcgttgatagtggattggaga 11690618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 199
Target Start/End: Complemental strand, 13656214 - 13656074
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgta 151  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||||||||| ||||||||||||||||||  |||||    
T  13656214 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacttgtca-agctaatttcttgtaacctcttgta 13656121  T
Q  152 tcccttttgtaagaactctcattgatagtggattggagagaacaatct 199  Q
    ||||||||||||||||||   ||||||||||||||||||| |||||||    
T  13656120 tcccttttgtaagaactc-atttgatagtggattggagagtacaatct 13656074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 36773496 - 36773688
Alignment:
Q  9 gttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagtagaaat 100  Q
    |||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||       ||||||||||||||    | | | | ||||    
T  36773496 gttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa----atgggaataaat 36773590  T
Q  101 tagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatc 198  Q
    ||||||||||||| |||| |||||   ||||||||||||||||| |||||||||| |||| |||||||||||  |||||||||||||||||||| |||||    
T  36773591 tagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactct--ttgatagtggattggagagatcaatc 36773687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 17057611 - 17057411
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||||||||||||||||       ||||||||||||| |    ||| |     
T  17057611 tgattagagttctcttgggttggg-aaatattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaa----aaatgg 17057517  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| |||  | |||||   ||||||||| ||||||| |||||||||| | ||||||||||  ||||||||||||||||||||||    
T  17057516 gtagaaattagggttgttctttgcaagcttgttgaagctaattttttgtaactcatttgtatctc-tttgtaagaa--ctcattgatagtggattggaga 17057420  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  17057419 gatcaatct 17057411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 17085594 - 17085394
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||||||||||||||||       ||||||||||||| |    ||| |     
T  17085594 tgattagagttctcttgggttggg-aaatattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaa----aaatgg 17085500  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| |||  | |||||   ||||||||| ||||||| |||||||||| | ||||||||||  ||||||||||||||||||||||    
T  17085499 gtagaaattagggttgttctttgcaagcttgttgaagctaattttttgtaactcatttgtatctc-tttgtaagaa--ctcattgatagtggattggaga 17085403  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  17085402 gatcaatct 17085394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 36318251 - 36318051
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    ||||||||||| |||||||||||| ||| |||| ||||||||||| ||||||||||||||||||||||       ||||||||||||| |    ||| |     
T  36318251 tgattagagttatcttgggttggg-aaatattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaa----aaatgg 36318157  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| |||||| |||||   | ||||||| |||||| ||||||||||| | ||||||||||  ||||||||||||||||||||||    
T  36318156 gtagaaattagggttgttctttgtgagcttgttgaaactaatttattgtaacccatttgtatctc-tttgtaagaa--ctcattgatagtggattggaga 36318060  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  36318059 gatcaatct 36318051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 54 - 199
Target Start/End: Complemental strand, 12647569 - 12647428
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgta 151  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||||||||| ||||||||||||||||||  |||||    
T  12647569 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacttgtca-agctaatttcttgtaacctcttgta 12647476  T
Q  152 tcccttttgt-aagaactctcattgatagtggattggagagaacaatct 199  Q
    |||||||||| ||||||||   ||||||||||||||||||| |||||||    
T  12647475 tcccttttgtaaagaactc-atttgatagtggattggagagtacaatct 12647428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 11151833 - 11151640
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacacctt-ggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| ||       ||||||| |||||||    ||| |     
T  11151833 tgattagagttctcttgggtt-gggaaacattgtaaacaccttgggtgagtgaaaatcattgagtctcttgttcattggtgaaattggga----aaatgg 11151739  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||  |||||| |||||| |||||   |||||||||||||||| ||||||||||| | ||||||||||||||  | ||||||||||||||||    
T  11151738 gtagaaattagatttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcac-tttgtaagaactct--tagatagtggattggaga 11151642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 6595248 - 6595048
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagag 93  Q
    ||||||||||||||||||| |||| ||| |||| |||||| |||| |||||| |||||||| ||||||||       |||||||| |||||   |||  |    
T  6595248 tgattagagttctcttgggctgggaaaa-attgtaaacactttggagagtgagaatcattgggtgtcttgttcattggtgagattaggaaa---aaatgg 6595153  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaaccattt-gtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||||| ||||||||||   |||||||||||||||||| ||| | ||| |||| ||||||||||   |||||||||||||||||||    
T  6595152 tagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgaatctcttt-gtaagaactcg--ttgatagtggattggagag 6595056  T
Q  192 aacaatct 199  Q
    | ||||||    
T  6595055 atcaatct 6595048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 33162692 - 33162492
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttggtgagattgg-gaaat---gaaaa-gagt 94  Q
    ||||||| ||||||||| |||||| |||||||| ||||||||||| ||| |||||||||| |||||||||| | |  |||| |||||   ||||| | ||    
T  33162692 tgattagggttctcttgagttggg-aaacattgtaaacaccttgggtgattgaaaatcatcgagtgtcttgttca--ttggtgaaattaggaaaatgggt 33162596  T
Q  95 agaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagaga 192  Q
    ||||||||||||||||||| |||| |||||   |||||||||||||||||| ||||||||| || | ||||||||||  |||||||||||||| ||||||    
T  33162595 agaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctct-gtaagaactc--attgatagtggattagagaga 33162499  T
Q  193 acaatct 199  Q
     ||||||    
T  33162498 tcaatct 33162492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 24885587 - 24885759
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttggtgagattgggaaat---gaaaa-gagta 95  Q
    |||||||||||||| ||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||| | |  |||  ||||   ||||| |||||    
T  24885587 tgattagagttctcatgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttca-tttgtaaaattgggaaaatgagta 24885684  T
Q  96 gaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactc 169  Q
    ||||||||| |||||| |||||| |||||   |||||||||||||||| ||||||||| ||| | |||||||||||    
T  24885685 gaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgta-cccctctgtaagaactc 24885759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 39284811 - 39284880
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacacctt-ggtgagtgaaaatcattgagtgtcttg 70  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  39284811 tgattagagttctcttgggtt-gggaaacattgtaaacaccttgggtgagtgaaaatcattgagtatcttg 39284880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 45726950 - 45727055
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||| ||||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  45726950 gtagaaattagagttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctcttt-gtaagaactc--attgatagtggattggaga 45727046  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  45727047 gatcaatct 45727055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 199
Target Start/End: Original strand, 11067252 - 11067431
Alignment:
Q  23 gggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttggtgagattgg-gaaat--gaaaa--gagtagaaattagggttgttctt-gt 115  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||  | |  |||| |||||  |||||  | ||||||||||| ||||| ||| ||    
T  11067252 gggaaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttattca--ttggtgaaattggaaaaatgggtagaaattagtgttgtactttgt 11067349  T
Q  116 gaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatct 199  Q
    || ||||||| |||||||||||||||| ||||||||||| | ||||||||||  |||||| ||| ||||||| ||||| ||||||    
T  11067350 gagcttgtcaaagctaatttcttgtaacccatttgtatctc-tttgtaagaa--ctcatttataatggattgaagagatcaatct 11067431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 14202649 - 14202584
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacacctt-ggtgagtgaaaatcattgagtgt 66  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||||||||    
T  14202649 tgattagagttctcttgggtt-gggaaacattgtaaacaccttgggtgagtgaaaattattgagtgt 14202584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 35447031 - 35446933
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   | |||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  35447031 gtagaaattagggttgttctttgtgatcttgttgaatctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 35446935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 1631879 - 1631774
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||| |||||||| |||| |||||   ||||||| |||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  1631879 gtagaaattaggattgttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 1631783  T
Q  191 gaacaatct 199  Q
     | ||||||    
T  1631782 aatcaatct 1631774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 70
Target Start/End: Original strand, 17450546 - 17450586
Alignment:
Q  31 ttgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  17450546 ttgcaaacaccttgggtgagtgaaaatcattgagtgtcttg 17450586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 13121703 - 13121764
Alignment:
Q  10 ttctcttgggttggggaaacatt-gcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    ||||||||||||||| ||||||| | |||||| |||| |||||||||||||||||||||||||    
T  13121703 ttctcttgggttggg-aaacatttgtaaacacattgggtgagtgaaaatcattgagtgtcttg 13121764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 42288257 - 42288152
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||| |||||||||| |||| |||||   ||||||||| |||||||| ||||||||  |||| |||||| |||  ||||||| |||||||||||    
T  42288257 gtagaaattaaggttgttctttgtgagcttgttgaagctaatttattgtaacccatttgtatttcttt-gtaagagctc--attgataatggattggaga 42288161  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  42288160 gatcaatct 42288152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 12123824 - 12123757
Alignment:
Q  4 ttagagttctcttgggttggggaaacattgc-aaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    ||||||||||||| ||||||| |||||||   ||||||||||| |||||||||||||| ||||||||||    
T  12123824 ttagagttctcttaggttggg-aaacatttataaacaccttggatgagtgaaaatcatcgagtgtcttg 12123757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 1e-43; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 2171773 - 2171582
Alignment:
Q  1 tgattagagtt-ctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||    ||      
T  2171773 tgattagagtttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa----aatg 2171679  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||| | ||||||||||  |||||||||||||||||||||||    
T  2171678 gtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaaccctttgtatctc-tttgtaagaa--ctcattgatagtggattggagag 2171582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 5406440 - 5406242
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagag 93  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||     |  |    
T  5406440 tgattagagttctctcgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa-----atgg 5406347  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| | ||||||||||  |||||||||||||||||||||||    
T  5406346 tagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctc-tttgtaagaa--ctcattgatagtggattggagag 5406250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 5410765 - 5410567
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagag 93  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||     |  |    
T  5410765 tgattagagttctctcgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa-----atgg 5410672  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| | ||||||||||  |||||||||||||||||||||||    
T  5410671 tagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctc-tttgtaagaa--ctcattgatagtggattggagag 5410575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 31404915 - 31404717
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||     |  |    
T  31404915 tgattagagttctcttgggttgga-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcatcagtgagattgggaaa-----atgg 31404822  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| | ||||||||||  |||||||||||||||||||||||    
T  31404821 tagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctc-tttgtaagaa--ctcattgatagtggattggagag 31404725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 16452571 - 16452379
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||   ||||| |    
T  16452571 tgattagagttctcttgggttgag-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaa---aaaaggg 16452476  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaaccattt-gtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||| |||  |||| | |||| |||||  |||||||||||||||||||||||    
T  16452475 tagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaaccctttcatatctc-tttggaagaa--ctcattgatagtggattggagag 16452379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 30834778 - 30834586
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||| | |||||||| |||||||| |||||||||||||||||||||||||||       ||||||||||||||   |||| |    
T  30834778 tgattagagttctcttgggttgag-aaacattgtaaacacctcggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa---aaaggg 30834683  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| | |||| |||||  |||||||||||||||||||||||    
T  30834682 tagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctc-tttggaagaa--ctcattgatagtggattggagag 30834586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 33160595 - 33160394
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaa-tcattgagtgtctt-------ggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||       |||||||||||||||  |||||     
T  33160595 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaaatcattgagtgtcttattcattggtgagattgggaaa--aaaag- 33160500  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||||||||||| | |||||||| | ||||||||||  ||||||||| ||||||||||||    
T  33160499 gtagaaattagagttgttctttgtgaacttgtcaaagctaatttcttgtaactcttttgtatctc-tttgtaagaa--ctcattgatggtggattggaga 33160403  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  33160402 gatcaatct 33160394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 5413634 - 5413436
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagag 93  Q
    ||||||||||||||| |||||||| |||||||| |||||| |||||||||||||||||||||||||||||       ||||||||||||||    ||| |    
T  5413634 tgattagagttctctcgggttggg-aaacattgtaaacacattggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa----aag-g 5413541  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaaccattt-gtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||||| | |||||||||| |||||||||||||||||| ||| ||||| |||| ||||||||||  ||||||||||||||||||||    
T  5413540 tagaaattagggttgttctttgcgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt-gtaagaactc--attgatagtggattggagag 5413444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 27647847 - 27647983
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgta 151  Q
    |||||||||||||||||||||||||||||||     || ||||||||||||||| |||| |||||||||||||| |||||||||||||||||| ||||||    
T  27647847 aatcattgagtgtcttggtgagattgggaaa-----agggtagaaattagggtttgttcattgtgaacttgtca-agctaatttcttgtaaccttttgta 27647940  T
Q  152 tcccttttgtaagaactctcattgatagtggattggagagaacaa 196  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||    
T  27647941 tcccttttgtaagaactct--ttgatagtggattggagagtacaa 27647983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 3072995 - 3072809
Alignment:
Q  1 tgattagag-ttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    ||||||||| ||||||||||||||| |||||| | ||||||||||  ||| ||||||||||||||||||||||||||||||     |||||  |||||||    
T  3072995 tgattagagcttctcttgggttggg-aaacatgggaaacaccttgaagagagaaaatcattgagtgtcttggtgagattgg-----gaaaatggtagaaa 3072902  T
Q  100 ttagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa--ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||| |||||||||||||| | ||||||||||||||  |  |||||||| ||||||||||||  ||||||||||||| |||||||||    
T  3072901 ttagggttgttcattgtgaacttgtcaaatctaatttcttgtaactctttttgtatctcttttgtaagaa--ctcattgatagtgaattggagag 3072809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 16554803 - 16554987
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||   || || |||||||||||||||||||||||||||||||     || |||||||    
T  16554803 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtaaagagagaatcattgagtgtcttggtgagattgggaaa-----agggtagaaa 16554895  T
Q  100 ttagggtt-gttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||| |||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||    
T  16554896 ttagggtttgttcattgtgaacttgtca-agctaatttcttgtaaccttttgtatcccttttgtaagaactc-atttgatagtggattggagag 16554987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 16631359 - 16631543
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||   || || |||||||||||||||||||||||||||||||     || |||||||    
T  16631359 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtaaagagagaatcattgagtgtcttggtgagattgggaaa-----agggtagaaa 16631451  T
Q  100 ttagggtt-gttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||| |||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||    
T  16631452 ttagggtttgttcattgtgaacttgtca-agctaatttcttgtaaccttttgtatcccttttgtaagaactc-atttgatagtggattggagag 16631543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 9183273 - 9183073
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||| ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||       ||||||||| ||||    | |     
T  9183273 tgattagagttctcctgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgagaaa----atgg 9183179  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| ||||| ||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  9183178 gtagaaattagggttgttctttgtgaatttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 9183082  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  9183081 gatcaatct 9183073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 16653046 - 16653230
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||   || || |||||||||||||||||||||||||||||||     || ||| |||    
T  16653046 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtaaagagagaatcattgagtgtcttggtgagattgggaaa-----agggtaaaaa 16653138  T
Q  100 ttagggtt-gttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||| |||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||    
T  16653139 ttagggtttgttcattgtgaacttgtca-agctaatttcttgtaaccttttgtatcccttttgtaagaactc-atttgatagtggattggagag 16653230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 28137650 - 28137450
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||       ||||||||| |||||    ||| |     
T  28137650 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagaatggga----aaatgg 28137556  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| |||||| |||||   |||||||||||||||| ||||||||||  | ||||||||||  ||||||||||||||||||||||    
T  28137555 gtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatttc-tttgtaagaa--ctcattgatagtggattggaga 28137459  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  28137458 gatcaatct 28137450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 412035 - 412220
Alignment:
Q  1 tgattagag-ttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    ||||||||| |||||||||||||   |||||| | ||||||||||  ||| ||||||||||||||||||||||||||||||||||    ||| |||||||    
T  412035 tgattagagcttctcttgggttga--aaacatgggaaacaccttgaagagagaaaatcattgagtgtcttggtgagattgggaaa----aag-gtagaaa 412127  T
Q  100 ttagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa--ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||| |||||||||| ||| | ||||||||||||||  |  |||||||| ||||||||||||  ||||||||||||||||| |||||    
T  412128 ttagggttgttcattgtgaacttatcaaatctaatttcttgtaactctttttgtatctcttttgtaagaa--ctcattgatagtggattagagag 412220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 191
Target Start/End: Complemental strand, 16578700 - 16578568
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgta 151  Q
    |||||||||||||||||||||||||||||||     || ||||||||||||||| | || |||||||||||||| |||||||||||||||||| ||||||    
T  16578700 aatcattgagtgtcttggtgagattgggaaa-----agggtagaaattagggtttgctcattgtgaacttgtca-agctaatttcttgtaaccttttgta 16578607  T
Q  152 tcccttttgtaagaactctcattgatagtggattggagag 191  Q
    ||||||||||||||||||   |||||||||||||||||||    
T  16578606 tcccttttgtaagaactc-atttgatagtggattggagag 16578568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 191
Target Start/End: Original strand, 16616680 - 16616812
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgta 151  Q
    |||||||||||||||||||||||||||||||     || ||||||||||||||| | || |||||||||||||| |||||||||||||||||| ||||||    
T  16616680 aatcattgagtgtcttggtgagattgggaaa-----agggtagaaattagggtttgctcattgtgaacttgtca-agctaatttcttgtaaccttttgta 16616773  T
Q  152 tcccttttgtaagaactctcattgatagtggattggagag 191  Q
    ||||||||||||||||||   |||||||||||||||||||    
T  16616774 tcccttttgtaagaactc-atttgatagtggattggagag 16616812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 6097675 - 6097537
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| |||||| ||||||| |||||| | |||||||||||||||||||||||||||||||| |||||||||||||      ||||  |||||||    
T  6097675 tgattagagtatctctttggttggg-aaacatggtaaacaccttggtgagtgaaaatcattgagtgttttggtgagattgg-----aaaaatggtagaaa 6097582  T
Q  100 ttagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac 143  Q
    ||||| |||||| |||||||||||||| | |||||||||||||||    
T  6097581 ttaggattgttctttgtgaacttgtcaaatctaatttcttgtaac 6097537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 25421239 - 25421432
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||   || || ||||||||||||||||||||||||||||||| |      |||||||    
T  25421239 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtaaagagagaatcattgagtgtcttggtgagattgggaaaggg-----gtagaaa 25421331  T
Q  100 ttagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    |||||||| |||| | |||||||||||| ||||||||||||||||||  ||||||||||||||| ||||||||   ||||||||||||||||||| ||||    
T  25421332 ttagggtttgttcatagtgaacttgtca-agctaatttcttgtaacctcttgtatcccttttgtaaagaactc-atttgatagtggattggagagtacaa 25421429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 54 - 199
Target Start/End: Original strand, 6027232 - 6027373
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgta 151  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||||||||| ||||||||||||||||||  |||||    
T  6027232 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacttgtca-agctaatttcttgtaacctcttgta 6027325  T
Q  152 tcccttttgt-aagaactctcattgatagtggattggagagaacaatct 199  Q
    |||||||||| ||||||||   ||||||||||||||||||| |||||||    
T  6027326 tcccttttgtaaagaactc-atttgatagtggattggagagtacaatct 6027373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 26954527 - 26954328
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacacctt-ggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    ||||||||||| |||| ||||||| |||||||| ||||||||| || ||||||||||||||||||||||||       |||||||||||||||           
T  26954527 tgattagagttatcttaggttggg-aaacattgtaaacacctttggggagtgaaaatcattgagtgtcttgttcatatgtgagattgggaaattg----- 26954434  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||| ||||||||||||||||| |||| |||||   ||||||||||||||||| ||| |||||| |||| ||||||||||  |||||||||||||||||||    
T  26954433 gtataaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatctgtatctcttt-gtaagaactc--attgatagtggattggaga 26954337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 3039137 - 3038952
Alignment:
Q  9 gttctcttgggttggggaaacattgcaaacaccttg-gtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagtagaaat 100  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||||||| |||||||       ||||||||||||||    |   ||||||||    
T  3039137 gttctcttgggttggg-aaacattgtaaacaccttgagtgagtgaaaatcattgaatgtcttgttcattggtgagattgggaaa----attggtagaaat 3039043  T
Q  101 tagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagaga 192  Q
    ||||||||||| |||||| ||| |   |||||||||||||||| ||||||||||| | ||||||||||||||  || |||||||||||||||||    
T  3039042 tagggttgttcattgtgagctttttgaagctaatttcttgtaacccatttgtatctc-tttgtaagaactct--ttaatagtggattggagaga 3038952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 17758044 - 17758149
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  17758044 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 17758140  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  17758141 gatcaatct 17758149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 21588952 - 21589057
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  21588952 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 21589048  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  21589049 gatcaatct 21589057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 21593685 - 21593790
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  21593685 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 21593781  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  21593782 gatcaatct 21593790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16567132 - 16567201
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    ||||||||||||||||||||| || |||||||| ||||||||||| |||||||||||||||||||||||||    
T  16567132 tgattagagttctcttgggtttgg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttg 16567201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 2973086 - 2972981
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||| |||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  2973086 gtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 2972990  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  2972989 gatcaatct 2972981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 26830270 - 26830165
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||| ||||||||| |||| |||||   |||||||||||||||| ||||||||||| |||| ||||||||||  |||||||||||||||||||    
T  26830270 gtagaaattagagttgttctttgtgagcttgttgaagctaatttcttgtaatccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 26830174  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  26830173 gatcaatct 26830165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 91 - 199
Target Start/End: Original strand, 5043646 - 5043753
Alignment:
Q  91 gagtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattgga 188  Q
    |||||||||||||| |||||||| |||| |||||   ||||||||||||||||| |||||||||| |||| ||||||||||  ||||||||| |||||||    
T  5043646 gagtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactc--attgatagtagattgga 5043742  T
Q  189 gagaacaatct 199  Q
    |||| ||||||    
T  5043743 gagatcaatct 5043753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 13153899 - 13154038
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaac-ttgtcatagctaatttcttgtaaccatttgt 150  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||| |||||| ||||||||||||||||||  ||||    
T  13153899 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacattgtca-agctaatttcttgtaacctcttgt 13153992  T
Q  151 atcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    || |||||||| ||||||||   ||||||||||||||||||| ||||    
T  13153993 attccttttgtaaagaactc-atttgatagtggattggagagtacaa 13154038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16568969 - 16569038
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    ||||||||||||||||||||| || |||||||| ||||||||||| | |||||||||||||||||||||||    
T  16568969 tgattagagttctcttgggtttgg-aaacattgtaaacaccttgggtaagtgaaaatcattgagtgtcttg 16569038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 34164842 - 34164981
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaac-ttgtcatagctaatttcttgtaaccatttgt 150  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||| |||||| ||||||||||||||||||  ||||    
T  34164842 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacattgtca-agctaatttcttgtaacctcttgt 34164935  T
Q  151 atcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    || |||||||| ||||||||   ||||||||||||||||||| ||||    
T  34164936 attccttttgtaaagaactc-atttgatagtggattggagagtacaa 34164981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 34167064 - 34167203
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaac-ttgtcatagctaatttcttgtaaccatttgt 150  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||| |||||| ||||||||||||||||||  ||||    
T  34167064 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacattgtca-agctaatttcttgtaacctcttgt 34167157  T
Q  151 atcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    || |||||||| ||||||| |  ||||||||||||||||||| ||||    
T  34167158 attccttttgtaaagaact-tatttgatagtggattggagagtacaa 34167203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 17763011 - 17763116
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   ||||||||||||||||| ||||||||||  ||||| ||||||||  ||||||||||||||||||     
T  17763011 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatct-ttttggaagaactc--attgatagtggattggagt 17763107  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  17763108 gatcaatct 17763116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 3808856 - 3808750
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacca--tttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
    ||||||||||||||||||||| |||| |||||   | ||||||||||||||||   |||||||| |||| ||||||||||  ||||||||||||||||||    
T  3808856 gtagaaattagggttgttctttgtgagcttgttgaaactaatttcttgtaacccattttgtatctcttt-gtaagaactc--attgatagtggattggag 3808760  T
Q  190 agaacaatct 199  Q
    ||| ||||||    
T  3808759 agatcaatct 3808750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 33211427 - 33211362
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacacctt-ggtgagtgaaaatcattgagtgt 66  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| ||| | |||||||||||||||||    
T  33211427 tgattagagttctcttgggtt-gggaaacattgtaaacaccttgggtcactgaaaatcattgagtgt 33211362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 33342289 - 33342150
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattaggg-ttgttc-ttgtgaac-ttgtcatagctaatttcttgtaaccatttgt 150  Q
    |||||||||||||||||||||||||||     |||| | ||||||||||||| |||||| | |||||| |||||| ||||||||||||||||||  ||||    
T  33342289 aatcattgagtgtcttggtgagattgg-----gaaaggggtagaaattagggtttgttcatagtgaacattgtca-agctaatttcttgtaacctcttgt 33342196  T
Q  151 atcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    |  |||||||| ||||||||   ||||||||||||||||||| ||||    
T  33342195 actccttttgtaaagaactc-atttgatagtggattggagagtacaa 33342150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 603235 - 603130
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||| | ||||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| ||||||||||   ||||||||||||||||||    
T  603235 gtagaaatttgtgttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactcg--ttgatagtggattggaga 603139  T
Q  191 gaacaatct 199  Q
     | ||||||    
T  603138 aatcaatct 603130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 22424974 - 22424868
Alignment:
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaacc---atttgtatcccttttgtaagaactctcattgatagtggattgga 188  Q
    ||||||||||||||||||| |||||| |||||   ||||||||||||||||||    |||||||| | ||||||||||  |||||| |||||||||||||    
T  22424974 gtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccatttttgtatctc-tttgtaagaa--ctcatt-atagtggattgga 22424879  T
Q  189 gagaacaatct 199  Q
    |||| ||||||    
T  22424878 gagatcaatct 22424868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 4e-43; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 20762598 - 20762798
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||       ||||||||| ||||   |||| |    
T  20762598 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtatcttgttcattggtgagattgagaaa---aaaggg 20762693  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| | || |||||||  |||||||||||||||||||||||    
T  20762694 tagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctc-ttcgtaagaa--ctcattgatagtggattggagag 20762790  T
Q  192 aacaatct 199  Q
    | ||||||    
T  20762791 atcaatct 20762798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 40282311 - 40282503
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||  ||| ||||||||||||||||||||||||||||||||||     || |||||||    
T  40282311 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtagagagaaaatcattgagtgtcttggtgagattgggaaa-----agggtagaaa 40282403  T
Q  100 ttagggtt-gttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagagaacaat 197  Q
    |||||||| |||| |||||||||||||  | |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  40282404 ttagggttagttcattgtgaacttgtctaatctaatttcttgtaaccttttgtatcccttttgtaagaactct--ttgatagtggattggagagtacaat 40282501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 9987136 - 9987327
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||  ||| ||||||||||||||||||||||||||||||||||     || |||||||    
T  9987136 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtagagagaaaatcattgagtgtcttggtgagattgggaaa-----agggtagaaa 9987228  T
Q  100 ttagggttgttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatc 198  Q
    |||||||||||| |||||||||||||  | ||||||||||| |||| ||||||||||||||| |||||  ||||||||||||||||||||||| ||||||    
T  9987229 ttagggttgttcattgtgaacttgtctaatctaatttcttgcaaccttttgtatcccttttgcaagaa--ctcattgatagtggattggagagtacaatc 9987326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 20622472 - 20622279
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||  ||| |||||||||||| |||||||||||||||||||||     || |||||||    
T  20622472 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtagagggaaaatcattgactgtcttggtgagattgggaaa-----agggtagaaa 20622380  T
Q  100 ttagggttgttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgtatccc--ttttgtaagaactctcattgatagtggattggagagaacaa 196  Q
    |||||||||||| |||||||||||||| | |||||||||||||||| ||||||||||  |||||||||||||||  ||||||||||||||||||| ||||    
T  20622379 ttagggttgttcattgtgaacttgtcaaatctaatttcttgtaaccttttgtatcccttttttgtaagaactct--ttgatagtggattggagagtacaa 20622282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 21053892 - 21054081
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||  |||  |||||||||||||||||||||||||||||||||     || |||||||    
T  21053892 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtagagaaaaaatcattgagtgtcttggtgagattgggaaa-----agtgtagaaa 21053984  T
Q  100 ttagggtt-gttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagagaacaa 196  Q
    |||||||| |||| |||||||||||||| | ||||||||||| |||| |||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  21053985 ttagggtttgttcattgtgaacttgtcaaatctaatttcttgcaaccttttgtatcccttttgtaagaactct--ttgatagtggattggagagtacaa 21054081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 9036351 - 9036542
Alignment:
Q  1 tgattagagt-tctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaa 99  Q
    |||||||||| ||||||||||||   |||||| | ||||||||||   || || |||||||||||||||||||||||||||||||     || |||||||    
T  9036351 tgattagagtatctcttgggttga--aaacatgggaaacaccttgtaaagagagaatcattgagtgtcttggtgagattgggaaa-----agggtagaaa 9036443  T
Q  100 ttagggtt-gttc-ttgtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagagaacaat 197  Q
    |||||||| |||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||| |||| |||||    
T  9036444 ttagggtttgttcattgtgaacttgtca-agctaatttcttgtaaccttttgtatcccttttgtaagaactct--ttgatagtggattgaagagtacaat 9036540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 3156792 - 3156991
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagag 93  Q
    ||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||||||||||||||||       ||||||||| ||||    | | |    
T  3156792 tgattagagttctcttgggtttgg-aaacattgtaaacaccctggtgagtgaaaatcattgagtgtcttgttcattggtgagattgagaaa----atggg 3156886  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||||| ||||||||||   |||||||||||||||||| ||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  3156887 tagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggagag 3156983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 51765321 - 51765515
Alignment:
Q  1 tgattagag-ttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg------gtgagattgggaaatgaaaagag 93  Q
    ||||||||| ||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||      ||  ||||||||   |||||| |    
T  51765321 tgattagagcttctcttgggttgg--aaacattgtaaacaccttggtgagtgtaaatcattgagtgtcttgttcttggtttgattggga---gaaaaggg 51765415  T
Q  94 tagaaattagggttgttc--ttgtgaacttgtcatagctaatttcttgtaa--ccatttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
    |||||||||||||||| |  |||||||||||||| ||||||||||||||||  || |||||||| ||||||||||||  |||||||||||||||||||||    
T  51765416 tagaaattagggttgtacctttgtgaacttgtcaaagctaatttcttgtaaccccttttgtatctcttttgtaagaa--ctcattgatagtggattggag 51765513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 28220468 - 28220268
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtctt-------ggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| || ||||| ||||||||||| ||||||||||||||||||||||||       ||||||||| |||||    | |     
T  28220468 tgattagagttctcttgggttggg-aagcattgaaaacaccttgggtgagtgaaaatcattgagtgtcttattcattggtgagattcggaaa----atgg 28220374  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| ||||||||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  28220373 gtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 28220277  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  28220276 gatcaatct 28220268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 44455086 - 44455286
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||| |||||||||| ||||||||||||||       ||||||||||||||    | |     
T  44455086 tgattagagttttcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaaccattgagtgtcttgttcattggtgagattgggaaa----atgg 44455180  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| ||||||||||   | ||||||||||||||| ||||||||||  ||||||||||||||  |||||||||||||||||||    
T  44455181 gtagaaattagggttgttctttgtgaacttgttgaaactaatttcttgtaactcatttgtatct-ttttgtaagaactc--attgatagtggattggaga 44455277  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  44455278 gatcaatct 44455286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 50167409 - 50167217
Alignment:
Q  9 gttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagtagaaat 100  Q
    |||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||       ||||||||||||||    |  |||||||||    
T  50167409 gttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa----attagtagaaat 50167315  T
Q  101 tagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatc 198  Q
    |||||||||| || |||| ||||||| |||||||||||||||||| ||||||||| |||| |||| |||||  ||||||||||||||||||||| |||||    
T  50167314 tagggttgttatttgtgagcttgtcaaagctaatttcttgtaacccatttgtatctcttt-gtaaaaactc--attgatagtggattggagagatcaatc 50167218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 3189257 - 3189456
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||       ||||||||||| |||    ||||| |    
T  3189257 tgattaaagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcactgagtgtcttgttcattggtgagatttgga----aaaaggg 3189351  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    || ||||||||||||||| ||||||||||||   |||||||||| |||||| | ||||||| | |||||||||||  |||||||||||||||||||||||    
T  3189352 tataaattagggttgttctttgtgaacttgttgaagctaatttcctgtaactcttttgtat-ctttttgtaagaa--ctcattgatagtggattggagag 3189448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 3198074 - 3198273
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||       ||||||||||| |||    ||||| |    
T  3198074 tgattaaagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcactgagtgtcttgttcattggtgagatttgga----aaaaggg 3198168  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    || ||||||||||||||| ||||||||||||   |||||||||| |||||| | ||||||| | |||||||||||  |||||||||||||||||||||||    
T  3198169 tataaattagggttgttctttgtgaacttgttgaagctaatttcctgtaactcttttgtat-ctttttgtaagaa--ctcattgatagtggattggagag 3198265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 3206913 - 3207112
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaagag 93  Q
    |||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||       ||||||||||| |||    ||||| |    
T  3206913 tgattaaagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcactgagtgtcttgttcattggtgagatttgga----aaaaggg 3207007  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    || ||||||||||||||| ||||||||||||   |||||||||| |||||| | ||||||| | |||||||||||  |||||||||||||||||||||||    
T  3207008 tataaattagggttgttctttgtgaacttgttgaagctaatttcctgtaactcttttgtat-ctttttgtaagaa--ctcattgatagtggattggagag 3207104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 197150 - 196957
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||       ||||||||| ||    |||       
T  197150 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgaga----aaattg 197056  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| |||||| |||||   || |||||||||||||| |||||||||||| ||||||||||  ||||||||||||||||||||||    
T  197055 gtagaaattagggttgttctttgtgagcttgtttaagttaatttcttgtaactcatttgtatccc-tttgtaagaa--ctcattgatagtggattggaga 196959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 834409 - 834216
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||| ||||||||||||||||| |||||||| ||||||||||| || ||||||||||||||||||||||       ||||||||||||||    | |     
T  834409 tgattaaagttctcttgggttggg-aaacattgtaaacaccttgggtgcgtgaaaatcattgagtgtcttgttcatttgtgagattgggaaa----atgg 834315  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
     |||||||||||||||||||| |||| |||||   |||||||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||||||    
T  834314 atagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt-gtaagaactc--attgatagtggattggaga 834218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 3847363 - 3847170
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||       ||||||||||||    ||| |     
T  3847363 tgattagagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattggga----aaatgg 3847269  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| ||||||  ||||   |||||| || |||||| ||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  3847268 gtagaaattagggttgttctttgtgagtttgtttaagctaaatttttgtaacccatttgtatccc-tttgtaagaa--ctcattgatagtggattggaga 3847172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 8551029 - 8550829
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||  | |||||||| |||||| |||| |||||||||||||||||||||||||       ||||||||||||||    | |     
T  8551029 tgattagagttctcttgggttaag-aaacattgtaaacacattgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgggaaa----atgg 8550935  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||| |||||||| |||| |||||   ||||||||||||||||| ||||||||||||||| ||||||||||  |||||||||||||||||||    
T  8550934 gtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaactcatttgtatcccttt-gtaagaactc--attgatagtggattggaga 8550838  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  8550837 gatcaatct 8550829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 28223663 - 28223463
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||||||||| |||||||| | ||||||||| ||||||||||||||||||||||       |||||||||||||||    ||| |     
T  28223663 tgattagagttctcttgggttggg-aaacattgaagacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggga----aaatgg 28223569  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||| ||||| || || |||||||||   |||||||||||||||| ||||||||||| | ||||||||||  ||||||||||||||||||||||    
T  28223568 gtagaaattatggttgatctttctgaacttgttgaagctaatttcttgtaacccatttgtatctc-tttgtaagaa--ctcattgatagtggattggaga 28223472  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  28223471 gatcaatct 28223463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 49918275 - 49918476
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaa-caccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaag 91  Q
    |||||||||||||||||| ||||| |||||||  ||| |||||||| |||||||||||||||||||||||||       ||||||||| ||||    | |    
T  49918275 tgattagagttctcttggattggg-aaacattataaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgagaaa----atg 49918369  T
Q  92 agtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
     ||||||||||||||||||||| ||||||||||   |||||||||||||||||| ||||||||| |||| ||||||||||  ||||||||||||||||||    
T  49918370 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggag 49918466  T
Q  190 agaacaatct 199  Q
    ||| ||||||    
T  49918467 agatcaatct 49918476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 1833448 - 1833648
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||       |||||||||||||||    ||| |     
T  1833448 tgattagagttctcttggattggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggga----aaatgg 1833542  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| |||||||  | |   |||||| |||||||||| |||||||||| | ||||||||||  ||||||||||||||||||||||    
T  1833543 gtagaaattagggttgttctttgtgaatctattgaagctaaattcttgtaactcatttgtatctc-tttgtaagaa--ctcattgatagtggattggaga 1833639  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  1833640 gatcaatct 1833648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 31659164 - 31659364
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    ||||||||||||||||||||| || |||||||| ||||||||||| ||||||||||||||||||||||       ||||||||||||| |    ||| |     
T  31659164 tgattagagttctcttgggttcgg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaa----aaatgg 31659258  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||| ||||| |||||| |||||   |||||||||||||||| ||||||||||| | ||||||||||  || |||||||||||||||||||    
T  31659259 gtagaaattagggctgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctc-tttgtaagaa--cttattgatagtggattggaga 31659355  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  31659356 gatcaatct 31659364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 37503796 - 37503599
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    ||||||||||||| |||||||||  ||| |||| ||||||||||| |||||||||||||||||||||||||       ||||||||||||||    | |     
T  37503796 tgattagagttctattgggttgga-aaatattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa----atgg 37503702  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaaccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    ||| ||||||||||||||||| ||||||||||   ||||||||||||||||||  ||||||| |||| ||||||||||  ||||||||||||||||||||    
T  37503701 gtaaaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacc--ttgtatctcttt-gtaagaactc--attgatagtggattggagag 37503607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 28265788 - 28265596
Alignment:
Q  9 gttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttggt-------gagattgggaaatgaaaagagtagaaat 100  Q
    |||||||| ||||||| |||||||| ||||||||||| ||||||||||||||||||||||||| |       ||||||||||||   | || ||||||||    
T  28265788 gttctcttaggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggcgagattgggaaa---atag-gtagaaat 28265694  T
Q  101 tagggttgttc-ttgtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatc 198  Q
    ||||||||||| |||||| |||||   |||||||||||||||||| ||||||||| |||| |||||||||||  |||||||||||||||||||| |||||    
T  28265693 tagggttgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactct--ttgatagtggattggagagatcaatc 28265597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 199
Target Start/End: Complemental strand, 50169450 - 50169252
Alignment:
Q  3 attagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagt 94  Q
    ||||| ||| |||||||||||| |||||||| ||| ||||||| |||||||||||||||||||||||||       |||||||||| |||    | | ||    
T  50169450 attagggttatcttgggttggg-aaacattgtaaataccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaaaa----atgggt 50169356  T
Q  95 agaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagaga 192  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||||||| |||||||||| | |||||||| |  |||||||||||||||||| |||||    
T  50169355 agaaattagggttgttctttgtgagcttgtcaaagctaatttcttgtaactcatttgtatctc-tttgtaagta--ctcattgatagtggattgaagaga 50169259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 54 - 199
Target Start/End: Original strand, 44203617 - 44203758
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgta 151  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||||||||| ||||||||||||||||||  |||||    
T  44203617 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacttgtca-agctaatttcttgtaacctcttgta 44203710  T
Q  152 tcccttttgt-aagaactctcattgatagtggattggagagaacaatct 199  Q
    |||||||||| ||||||||   ||||||||||||||||||| |||||||    
T  44203711 tcccttttgtaaagaactc-atttgatagtggattggagagtacaatct 44203758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 13316521 - 13316402
Alignment:
Q  67 cttggtgagattgggaaatgaaaagagtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaag 164  Q
    ||||||||||||||||||    ||| ||||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| | |||| |||    
T  13316521 cttggtgagattgggaaa----aagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctc-tttggaag 13316427  T
Q  165 aactctcattgatagtggattggagag 191  Q
    ||  |||||||||||||||||||||||    
T  13316426 aa--ctcattgatagtggattggagag 13316402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 23555507 - 23555315
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtctt-------ggtgagattgggaaatgaaaaga 92  Q
    |||||| ||||||||||||||||| |||||||| ||||||||||| ||| ||||||| ||||||||||||       ||||||||||| |||    | |     
T  23555507 tgattaaagttctcttgggttggg-aaacattgtaaacaccttgggtgaatgaaaattattgagtgtcttattctttggtgagattggaaaa----atgg 23555413  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| ||||||||||   | |||||||||| |||| |||||||||| |||| ||||||||||  |||||||||||||||||||    
T  23555412 gtagaaattagggttgttctttgtgaacttgttgaaactaatttcttataactcatttgtatctcttt-gtaagaactc--attgatagtggattggaga 23555316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 37560111 - 37559910
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacacctt-ggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    ||||||||||||||||||||| |  |||||||| |||||| || |||||||||||||||||||||||||||       |||||||| |||||    | |     
T  37560111 tgattagagttctcttgggtttga-aaacattgtaaacacattaggtgagtgaaaatcattgagtgtcttgttcattggtgagattaggaaa----atgg 37560017  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtc-atagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
    ||||||||||| ||||||||| ||||||||||  | |||||||||||||||| ||||||||||| | ||||||||||  ||| ||||||||| |||||||    
T  37560016 gtagaaattagagttgttctttgtgaacttgttgaaagctaatttcttgtaacccatttgtatctc-tttgtaagaa--ctcgttgatagtgaattggag 37559920  T
Q  190 agaacaatct 199  Q
    ||| ||||||    
T  37559919 agatcaatct 37559910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 10925149 - 10925352
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtc-------ttggtgagattgggaaatgaaaaga 92  Q
    |||||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||       |||||||||||  ||||  ||| |     
T  10925149 tgattatagttctcttgggttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagatt--gaaa--aaatgg 10925243  T
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaa-ctctcattgatagtggattggag 189  Q
     ||||||||| |||||||| |||||| |||||   ||||||||||||||||| |||||||||| | ||||||||||    ||||||||||||||||||||    
T  10925244 atagaaattatggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctc-tttgtaagaagaattcattgatagtggattggag 10925342  T
Q  190 agaacaatct 199  Q
    | | ||||||    
T  10925343 aaatcaatct 10925352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 19754516 - 19754621
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  19754516 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaaccgatttgtatctcttt-gtaagaactc--attgatagtggattggaga 19754612  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  19754613 gatcaatct 19754621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 47255487 - 47255382
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  47255487 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 47255391  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  47255390 gatcaatct 47255382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 4552871 - 4552679
Alignment:
Q  9 gttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagtagaaat 100  Q
    |||||||||||||| | |||||||| ||||||||||| |||| ||||||||||||||||||||       ||||||||| ||||    | | ||||||||    
T  4552871 gttctcttgggttgag-aaacattgtaaacaccttgggtgagggaaaatcattgagtgtcttgttcattggtgagattgagaaa----atgggtagaaat 4552777  T
Q  101 tagggttgttctt-gtgaacttgtcatagctaatttcttgtaacca-tttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatc 198  Q
    |||| |||| ||| |||| |||||   ||||||||||||||||||  ||||||||||||| ||||||||||  ||||||| ||||||||||||| |||||    
T  4552776 taggtttgtcctttgtgagcttgttgaagctaatttcttgtaacccctttgtatcccttt-gtaagaactc--attgataatggattggagagatcaatc 4552680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 13659578 - 13659378
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtg-agtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||| ||||| | |||||||| ||||||||||| | |||||||||||||||||||||||       ||||||||||||    ||| |     
T  13659578 tgattagagttctcttaggttgag-aaacattgtaaacaccttggggtagtgaaaatcattgagtgtcttgttcatttgtgagattggga----aaacgg 13659484  T
Q  93 gtagaaattagggttg-ttcttgtgaacttgtcatagctaatttcttg-taaccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
     ||||||||||||||| || |||| | |||||   ||||||||||||| || |||||| |||| | ||||||||||  ||||||||||||||||||||||    
T  13659483 atagaaattagggttgttttttgtaagcttgttgaagctaatttcttgttacccatttatatctc-tttgtaagaa--ctcattgatagtggattggaga 13659387  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  13659386 gatcaatct 13659378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 15820233 - 15820302
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    ||||||||||||||||| |||||| |||||||| ||||||||||| |||||||||||||||||||||||||    
T  15820233 tgattagagttctcttgagttggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttg 15820302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 11348719 - 11348824
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   |||||||||||||||||| ||||||||| ||||  |||||||||  |||||||||||||||||||    
T  11348719 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttc-taagaactc--attgatagtggattggaga 11348815  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  11348816 gatcaatct 11348824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 13547236 - 13547131
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   ||||| |||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  13547236 gtagaaattagggttgttctttgtgagcttgttgaagctattttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 13547140  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  13547139 gatcaatct 13547131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 13549147 - 13549042
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| ||||| | | |||||||| ||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  13549147 gtagaaattagggttgttctttgtgagcttgttaaacctaatttcatgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 13549051  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  13549050 gatcaatct 13549042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 30476690 - 30476488
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacacctt-ggtgagtgaaaatcattgagt---------gtcttggtgagattgggaaatgaaaa 90  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||| ||||||||||||||||          | ||||||||||||||||   || |    
T  30476690 tgattagagttctcttgggtt-gggaaacattgtaaacaccttgggtgggtgaaaatcattgagttcttgttcaatattggtgagattgggaa---aata 30476595  T
Q  91 gagtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattgga 188  Q
    | ||||||||||||||||||| || |||||||||   || |||||| |||||| ||||||||||| | ||||||||||  |||||||||| |||||||||    
T  30476594 g-gtagaaattagggttgttctttatgaacttgttgaagataatttattgtaacccatttgtatctc-tttgtaagaa--ctcattgatactggattgga 30476499  T
Q  189 gagaacaatct 199  Q
     ||| ||||||    
T  30476498 cagatcaatct 30476488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 31925854 - 31925749
Alignment:
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||| ||||| |||||| |||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  31925854 gtagaaattagggatgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaga 31925758  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  31925757 gatcaatct 31925749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 37168318 - 37168424
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacca--tttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
    ||||||||||||||||||||| |||| |||||   ||||||||||||||||||   |||||||| |||| ||||||||||  ||||||||||||||||||    
T  37168318 gtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctcttt-gtaagaactc--attgatagtggattggag 37168414  T
Q  190 agaacaatct 199  Q
    ||| ||||||    
T  37168415 agatcaatct 37168424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 13138216 - 13138147
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    ||||||| ||||||||||| |||| |||||||| ||||||||||| |||||||||||||||||||||||||    
T  13138216 tgattagggttctcttggggtggg-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttg 13138147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 19752707 - 19752812
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| | || |||||   |||||||||||||||||| ||||||||| |||| ||||||||||  |||||||| ||||||||||    
T  19752707 gtagaaattagggttgttctttgcgagcttgttgaagctaatttcttgtaaccgatttgtatctcttt-gtaagaactc--attgatagaggattggaga 19752803  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  19752804 gatcaatct 19752812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 42298122 - 42298017
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||||||||| || |||| |||||   ||||||||||||||||| |||||||||| |||| ||||||||||  ||||||||||||||| |||    
T  42298122 gtagaaattagggttgttttttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaagaactc--attgatagtggattgaaga 42298026  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  42298025 gatcaatct 42298017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 7482378 - 7482272
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacca--tttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
    ||||||||||||||||||||| |||| |||||   ||||||||||||||||||   |||||||| |||| ||||||||||  |||||||||| |||||||    
T  7482378 gtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctcttt-gtaagaactc--attgatagtgaattggag 7482282  T
Q  190 agaacaatct 199  Q
    ||| ||||||    
T  7482281 agatcaatct 7482272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 45644481 - 45644398
Alignment:
Q  112 ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagagaacaat 197  Q
    |||||| ||||||| ||||||||||||| ||| |||||||||| |||| ||||||||||  ||||||||||||||||||||| ||||    
T  45644481 ttgtgagcttgtcaaagctaatttcttgcaactcatttgtatctcttt-gtaagaactc--attgatagtggattggagagatcaat 45644398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 46064852 - 46065044
Alignment:
Q  9 gttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagtagaaat 100  Q
    ||||||||||| |||  |||||||| ||||||||||| |||||||||||||||||||||||||       ||||||||||||    ||| |  || ||||    
T  46064852 gttctcttggggtgga-aaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattggga----aaatggataaaaat 46064946  T
Q  101 tagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatc 198  Q
    |||| |||||| |||||| || ||   ||||||||||||||||| ||| |||||| | ||||||||||  |||||| ||||||||||||||||| |||||    
T  46064947 taggtttgttctttgtgagctcgttgaagctaatttcttgtaactcatgtgtatctc-tttgtaagaa--ctcattcatagtggattggagagatcaatc 46065043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 193632 - 193737
Alignment:
Q  93 gtagaaattagggttgttcttg-tgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||||||||||||||  | | |||||   ||||||||||||||||| |||||||||| |||| |||| |||||  |||||||||||||||||||    
T  193632 gtagaaattagggttgttctttattagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaataactc--attgatagtggattggaga 193728  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  193729 gatcaatct 193737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 29136268 - 29136373
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||||| |||| |||||   ||||||||||||| |||| ||||||||  |||| ||||||||||  |||||| ||||||||||||    
T  29136268 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttggaacccatttgtatttcttt-gtaagaactc--attgatcgtggattggaga 29136364  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  29136365 gatcaatct 29136373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13316560 - 13316513
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgag 49  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  13316560 tgattagagttctcttgggtt-gggaaacattgtaaacaccttggtgag 13316513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 22079337 - 22079441
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacca-tttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||| | |||||||| |||| ||||| | ||||||||||||||||||| |||||||| ||||   |||||  |||||||||| |||||||||||    
T  22079337 gtagaaattatgtttgttctttgtgagcttgttaaagctaatttcttgtaaccattttgtatctctttgtaaagaa--ctcattgatattggattggaga 22079434  T
Q  191 gaacaat 197  Q
    || ||||    
T  22079435 gatcaat 22079441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 37033220 - 37033121
Alignment:
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-cca-tttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
    ||||||||||||||||||| |||||| |||||   |||||||||||||||| ||| |||| ||| | ||||||||||  |||||||||||||||||||||    
T  37033220 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaatccattttgcatctc-tttgtaagaa--ctcattgatagtggattggag 37033124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 47115192 - 47115298
Alignment:
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaacc--atttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
    ||||||||||||||||||| |||||| |||||   ||||||||||||||||||   |||||||| | ||||||| ||  | |||||||||||||||||||    
T  47115192 gtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctc-tttgtaaaaa--cccattgatagtggattggag 47115288  T
Q  190 agaacaatct 199  Q
    ||| ||||||    
T  47115289 agatcaatct 47115298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 16455677 - 16455747
Alignment:
Q  127 agctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatct 199  Q
    |||||||||||||||||| ||||||||| || | ||||||||||  ||||||||||||||||||||| ||||||    
T  16455677 agctaatttcttgtaacccatttgtatctctgt-gtaagaactc--attgatagtggattggagagatcaatct 16455747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 40122438 - 40122371
Alignment:
Q  3 attagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    ||||||||| |||||| ||||| |||||||| ||||||||||| ||||| ||||||||||| |||||||    
T  40122438 attagagttatcttggattggg-aaacattgtaaacaccttgggtgagtaaaaatcattgaatgtcttg 40122371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 928220 - 928150
Alignment:
Q  1 tgattagagttctcttgggttggggaaacatt-gcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    |||||||  ||||||||||||||| ||||||| | ||||||||||| ||||||||||||| |||||||||||    
T  928220 tgattaggattctcttgggttggg-aaacatttgtaaacaccttgggtgagtgaaaatcaatgagtgtcttg 928150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 34603597 - 34603703
Alignment:
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaacc--atttgtatcccttttgtaagaactctcattgatagtggattggag 189  Q
    ||||||||||||||||||| |||||| |||||   ||||||||||||||||||   ||| |||| | ||||||||||  ||||||||| |||||||| ||    
T  34603597 gtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttttatctc-tttgtaagaa--ctcattgatggtggattgaag 34603693  T
Q  190 agaacaatct 199  Q
    ||| ||||||    
T  34603694 agatcaatct 34603703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 192
Target Start/End: Original strand, 15820328 - 15820426
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||| |||||||| |||||||| |||| |||||   ||||||||||||||||| |||||||||| ||||| ||||||  ||||||||||||| |||| |||    
T  15820328 gtaaaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacacatttgtatctctttt-taagaa--ctcattgatagtgcattgaaga 15820424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 45644597 - 45644528
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtcttg 70  Q
    ||||||| |||||||| ||||||  |||||||| ||||| ||||| ||||||||||||||| |||||||||    
T  45644597 tgattagggttctcttaggttgga-aaacattgtaaacatcttgggtgagtgaaaatcattaagtgtcttg 45644528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 37879058 - 37879006
Alignment:
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaacc 144  Q
    ||||||||||||||||||| |||||| |||||   ||||||||||||||||||    
T  37879058 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacc 37879006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 843 - 1033
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtg------tcttggtgagattgggaaatgaaaagagt 94  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||      ||||||||||||||||||   ||||| ||    
T  843 tgattagagttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcttggtgagattgggaa---aaaagggt 938  T
Q  95 agaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||| || |||||||| ||||   || ||  |||||||||||||||||||||||    
T  939 agaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt--gaacaa--ctcattgatagtggattggagag 1033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 114537 - 114728
Alignment:
Q  9 gttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagtagaaatt 101  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||    ||| |||||||||    
T  114537 gttctcttgggttggg-aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa----aagggtagaaatt 114631  T
Q  102 agggttgttctt-gtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagagaacaatct 199  Q
    | |||||||||| |||||||||||| ||||||||||||||||| | |||||||| | ||||||||||  |||||||||||||||||||||||| ||||||    
T  114632 aaggttgttctttgtgaacttgtcaaagctaatttcttgtaacgcttttgtatctc-tttgtaagaa--ctcattgatagtggattggagagatcaatct 114728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 84; Significance: 4e-40; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 11404 - 11211
Alignment:
Q  1 tgattagag-ttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg------gtgagattgggaaatgaaaagag 93  Q
    ||||||||| ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||      ||||||||||||   |||||| |    
T  11404 tgattagagcttctcttgggttggg-aaacattgtaaacaccttggtgagtgtaaatcattgagtgtcttgttcttggtgagattggga---gaaaaggg 11309  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||| |||||||||||| | | |||||||||||||| || |||||||| ||||||||||||  ||| |||||||||||||||||||    
T  11308 tagaaattagggttgttctttgtgaacttgtaaaatctaatttcttgtaacccttttgtatctcttttgtaagaa--ctcgttgatagtggattggagag 11211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 8978 - 8785
Alignment:
Q  1 tgattagag-ttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg------gtgagattgggaaatgaaaagag 93  Q
    ||||||||| ||||||||||||||| |||||||| ||| ||||||||||||| ||| ||||||||||||||      ||||||||||||   |||||| |    
T  8978 tgattagagcttctcttgggttggg-aaacattgtaaagaccttggtgagtgtaaaccattgagtgtcttgttcttggtgagattggga---gaaaaggg 8883  T
Q  94 tagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||| |||||||||| | | | |||||||||||||| || |||||||| ||||||||||||  ||| |||||||||||||||||||    
T  8882 tagaaattagggttgttctttgtgaacttataaaatctaatttcttgtaacccttttgtatctcttttgtaagaa--ctcgttgatagtggattggagag 8785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 434459 - 434651
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagag 93  Q
    |||||||||||||||||||||||  |||||| | ||| ||||||||||||||||||||||||||||||||       ||||||||||| ||   |||| |    
T  434459 tgattagagttctcttgggttgga-aaacatggtaaataccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattggggaa---aaaggg 434554  T
Q  94 tagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||||| | ||||||||||  |||||||||||||||||||||||    
T  434555 tagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctc-tttgtaagaa--ctcattgatagtggattggagag 434651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 191
Target Start/End: Original strand, 11505 - 11675
Alignment:
Q  23 gggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaagagtagaaattagggttgttctt-g 114  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||    ||  ||||||||||||||||||||| |    
T  11505 gggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaa----aatggtagaaattagggttgttctttg 11600  T
Q  115 tgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggagag 191  Q
    ||||||||||| ||||||||||||||||| |||||||||| | ||||||||||  |||||||||||||||||||||||    
T  11601 tgaacttgtcaaagctaatttcttgtaactcatttgtatctc-tttgtaagaa--ctcattgatagtggattggagag 11675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 54 - 199
Target Start/End: Complemental strand, 2787 - 2646
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgta 151  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||||||||| ||||||||||||||||||  |||||    
T  2787 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacttgtca-agctaatttcttgtaacctcttgta 2694  T
Q  152 tcccttttgt-aagaactctcattgatagtggattggagagaacaatct 199  Q
    |||||||||| ||||||||   ||||||||||||||||||| |||||||    
T  2693 tcccttttgtaaagaactc-atttgatagtggattggagagtacaatct 2646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 20657 - 20457
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttgg-tgagtgaaaatcattgagtgtctt-------ggtgagattgggaaatgaaaaga 92  Q
    ||||||||||| |||||||||||| | |||||| ||||||||||| ||||||||||||||||||| | ||       |||||||||||||||    | ||    
T  20657 tgattagagttatcttgggttggg-agacattgtaaacaccttgggtgagtgaaaatcattgagtttattattcattggtgagattgggaaa----atga 20563  T
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    | |||||||||| ||||| || ||||||||||   |||||||||||||||| ||||||||||| | ||||||||||||||  |||||| |||||||||||    
T  20562 gcagaaattaggtttgttttttgtgaacttgttgaagctaatttcttgtaacccatttgtatctc-tttgtaagaactct--ttgatattggattggaga 20466  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  20465 gatcaatct 20457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 6258 - 6396
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgta 151  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||||||||| |||||||||||||||| |  |||||    
T  6258 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacttgtca-agctaatttcttgtaagcccttgta 6351  T
Q  152 tcccttttgt-aagaactctcattgatagtggattggagagaacaa 196  Q
    |||||||||| ||||||||   ||||||||||||||||||| ||||    
T  6352 tcccttttgtaaagaactc-atttgatagtggattggagagtacaa 6396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 149339 - 149139
Alignment:
Q  1 tgattagagttctcttgggttggggaaacattgcaaacaccttggtg-agtgaaaatcattgagtgtcttg-------gtgagattgggaaatgaaaaga 92  Q
    |||||||||||||||| ||||| | |||||||| ||||||||||| | |||||||||||||||||||||||       ||||||||||||    ||| |     
T  149339 tgattagagttctcttaggttgag-aaacattgtaaacaccttggggtagtgaaaatcattgagtgtcttgttcatttgtgagattggga----aaacgg 149245  T
Q  93 gtagaaattagggttg-ttcttgtgaacttgtcatagctaatttcttg-taaccatttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
     ||||||||||||||| || |||| | |||||   ||||||||||||| || |||||| |||| | ||||||||||  ||||||||||||||||||||||    
T  149244 atagaaattagggttgttttttgtaagcttgttgaagctaatttcttgttacccatttatatctc-tttgtaagaa--ctcattgatagtggattggaga 149148  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  149147 gatcaatct 149139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 54 - 191
Target Start/End: Complemental strand, 3909 - 3776
Alignment:
Q  54 aatcattgagtgtcttggtgagattgggaaatgaaaagagtagaaattagggtt-gttctt-gtgaacttgtcatagctaatttcttgtaaccatttgta 151  Q
    ||||||||||||||||||||||||||||||| |      ||||||||||||||| |||| | |||||| ||||| ||||||||||||||||||  |||||    
T  3909 aatcattgagtgtcttggtgagattgggaaaggg-----gtagaaattagggtttgttcatagtgaacatgtca-agctaatttcttgtaacctcttgta 3816  T
Q  152 tcccttttgt-aagaactctcattgatagtggattggagag 191  Q
    | |||||||| ||||||||   |||||||||||||||||||    
T  3815 ttccttttgtaaagaactc-atttgatagtggattggagag 3776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 18150 - 18046
Alignment:
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaac-catttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    ||||||||||||||||||| |||||| |||||   ||||||||||||||||| |||||||||| |||| |||| |   ||||||||||||||||||||||    
T  18150 gtagaaattagggttgttcattgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaaaa---ctcattgatagtggattggaga 18055  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  18054 gatcaatct 18046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 7348 - 7453
Alignment:
Q  93 gtagaaattagggttgttctt-gtgaacttgtcatagctaatttcttgtaacc-atttgtatcccttttgtaagaactctcattgatagtggattggaga 190  Q
    |||||||||| |||||||||| |||| |||||   |||||||||||||||||| ||||||||| |||| ||||||||||  ||||||||||||||||| |    
T  7348 gtagaaattaaggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaagaactc--attgatagtggattggaaa 7444  T
Q  191 gaacaatct 199  Q
    || ||||||    
T  7445 gatcaatct 7453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 169
Target Start/End: Complemental strand, 80430 - 80353
Alignment:
Q  93 gtagaaattagggttgttc-ttgtgaacttgtcatagctaatttcttgtaa-ccatttgtatcccttttgtaagaactc 169  Q
    ||||||||||||||||||| |||||| |||||   ||||||||||||| || |||||||||| | ||||||||||||||    
T  80430 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgcaacccatttgtat-ctttttgtaagaactc 80353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 19173 - 19117
Alignment:
Q  9 gttctcttgggttggggaaacatt-gcaaacaccttggtgagtgaaaatcattgagtg 65  Q
    |||||||||||||||| ||||||| | |||||| | ||||||||||||||||||||||    
T  19173 gttctcttgggttggg-aaacatttgtaaacacttgggtgagtgaaaatcattgagtg 19117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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