View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6182_low_18 (Length: 260)
Name: NF6182_low_18
Description: NF6182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6182_low_18 |
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Alignment Details
Target: chr1 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 16 - 249
Target Start/End: Original strand, 30230553 - 30230786
Alignment:
| Q |
16 |
acctatacacaccattgttgacattcggatatatcacttgataccattcctcaatcttacccttcaactcaggtggtgaaagatccaagtccgggtttcg |
115 |
Q |
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| T |
30230553 |
acctatacacaccattgttgacattcggatatattacttgataccattcctcaatcttacccttcaactcaggtggtgaaagatccaagtccgggtttcc |
30230652 |
T |
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| Q |
116 |
ggccaacccatttaaaccggaattaaacaattgaattatatcataactctcattacatacaacatctttggagtctttgttccacaacattggcacagtg |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30230653 |
ggccaacccatttaaaccggaattaaacaattgaattatatcataactctcattacatacaacatctttggagtctttgttccacaacattggcacagtg |
30230752 |
T |
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| Q |
216 |
gatcttccatcatacccaccacttctcagcctat |
249 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
30230753 |
gatcttccatcatacccaccacttctcagcctat |
30230786 |
T |
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