View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6183_high_1 (Length: 658)

Name: NF6183_high_1
Description: NF6183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6183_high_1
NF6183_high_1
[»] chr6 (40 HSPs)
chr6 (10-642)||(30522365-30522994)
chr6 (106-189)||(25426139-25426222)
chr6 (78-189)||(28641739-28641850)
chr6 (44-198)||(281808-281958)
chr6 (106-250)||(4006622-4006766)
chr6 (44-189)||(27693399-27693540)
chr6 (154-224)||(10452426-10452496)
chr6 (100-189)||(2117372-2117461)
chr6 (63-141)||(4420660-4420734)
chr6 (50-152)||(32171349-32171447)
chr6 (105-170)||(32171455-32171520)
chr6 (78-198)||(2027396-2027516)
chr6 (44-189)||(27595527-27595668)
chr6 (111-198)||(1402956-1403043)
chr6 (78-141)||(34939761-34939824)
chr6 (78-251)||(8010264-8010437)
chr6 (105-171)||(28088239-28088305)
chr6 (85-187)||(31324427-31324529)
chr6 (209-255)||(33818088-33818134)
chr6 (106-171)||(1275136-1275201)
chr6 (84-224)||(6647323-6647461)
chr6 (78-163)||(31624085-31624170)
chr6 (55-141)||(34939530-34939612)
chr6 (44-133)||(2460111-2460196)
chr6 (84-168)||(3168257-3168341)
chr6 (78-189)||(7785734-7785843)
chr6 (119-163)||(9041467-9041511)
chr6 (44-189)||(32386523-32386664)
chr6 (122-189)||(3785734-3785801)
chr6 (90-149)||(17241254-17241313)
chr6 (84-226)||(2514634-2514776)
chr6 (105-159)||(7945901-7945954)
chr6 (105-219)||(33787762-33787876)
chr6 (49-170)||(2023558-2023676)
chr6 (84-189)||(3155145-3155249)
chr6 (82-151)||(5564122-5564191)
chr6 (154-227)||(11340691-11340764)
chr6 (55-141)||(32577957-32578039)
chr6 (86-150)||(27909636-27909700)
chr6 (146-222)||(29274287-29274363)
[»] chr4 (40 HSPs)
chr4 (78-227)||(21157699-21157848)
chr4 (87-163)||(7694009-7694085)
chr4 (44-223)||(2996508-2996683)
chr4 (85-227)||(54325034-54325176)
chr4 (112-223)||(30338615-30338727)
chr4 (113-189)||(30581702-30581778)
chr4 (100-227)||(30207583-30207709)
chr4 (105-224)||(49219073-49219192)
chr4 (78-225)||(23819023-23819169)
chr4 (84-139)||(29467620-29467675)
chr4 (49-140)||(6987706-6987793)
chr4 (117-187)||(24091434-24091504)
chr4 (88-177)||(26747402-26747492)
chr4 (78-139)||(20936219-20936280)
chr4 (122-219)||(35958594-35958691)
chr4 (105-157)||(17975386-17975438)
chr4 (100-152)||(18011877-18011929)
chr4 (84-250)||(21593002-21593173)
chr4 (44-133)||(27123312-27123397)
chr4 (105-177)||(29601025-29601097)
chr4 (111-227)||(32066434-32066548)
chr4 (78-149)||(1965950-1966021)
chr4 (108-163)||(12650304-12650359)
chr4 (105-188)||(18628560-18628643)
chr4 (136-227)||(24443969-24444060)
chr4 (78-189)||(29263339-29263450)
chr4 (156-198)||(20936070-20936112)
chr4 (78-131)||(1137739-1137792)
chr4 (78-139)||(1312860-1312921)
chr4 (100-141)||(19429726-19429767)
chr4 (166-227)||(47970249-47970310)
chr4 (105-186)||(56055723-56055803)
chr4 (105-141)||(5131267-5131303)
chr4 (84-160)||(6978958-6979034)
chr4 (78-198)||(24929453-24929573)
chr4 (105-221)||(27043847-27043963)
chr4 (105-189)||(35064824-35064908)
chr4 (105-189)||(51630080-51630164)
chr4 (78-198)||(52746830-52746950)
chr4 (84-152)||(55547040-55547108)
[»] chr3 (41 HSPs)
chr3 (49-189)||(21574460-21574595)
chr3 (53-189)||(2201097-2201236)
chr3 (43-187)||(25182946-25183087)
chr3 (105-220)||(40122770-40122884)
chr3 (105-183)||(13709840-13709918)
chr3 (44-171)||(14548681-14548804)
chr3 (78-227)||(27290891-27291038)
chr3 (105-227)||(27792803-27792925)
chr3 (78-226)||(20192596-20192744)
chr3 (105-189)||(24887300-24887384)
chr3 (78-189)||(19679318-19679429)
chr3 (49-157)||(37273135-37273239)
chr3 (105-227)||(38462212-38462334)
chr3 (84-189)||(24785174-24785279)
chr3 (51-189)||(36646349-36646483)
chr3 (84-151)||(37825129-37825196)
chr3 (78-171)||(3044249-3044342)
chr3 (105-198)||(32554999-32555091)
chr3 (78-139)||(36101587-36101648)
chr3 (78-139)||(50952352-50952413)
chr3 (146-242)||(1395587-1395683)
chr3 (86-158)||(20669172-20669244)
chr3 (105-189)||(23785224-23785308)
chr3 (113-227)||(24158528-24158641)
chr3 (87-151)||(48048981-48049045)
chr3 (106-189)||(32069119-32069201)
chr3 (84-163)||(33725870-33725949)
chr3 (78-188)||(1217790-1217900)
chr3 (44-187)||(41452494-41452633)
chr3 (84-189)||(1816552-1816657)
chr3 (111-196)||(2719431-2719515)
chr3 (209-250)||(24625378-24625419)
chr3 (92-189)||(25453863-25453960)
chr3 (78-139)||(30923888-30923949)
chr3 (78-139)||(36139897-36139958)
chr3 (165-226)||(53457309-53457370)
chr3 (106-170)||(2923466-2923530)
chr3 (84-136)||(25925764-25925816)
chr3 (78-146)||(36200108-36200176)
chr3 (85-137)||(45432936-45432988)
chr3 (84-152)||(48528562-48528630)
[»] chr1 (51 HSPs)
chr1 (49-227)||(52286609-52286784)
chr1 (84-227)||(17269181-17269324)
chr1 (51-226)||(15579415-15579585)
chr1 (84-189)||(12477283-12477388)
chr1 (79-177)||(4622074-4622172)
chr1 (85-189)||(30257652-30257756)
chr1 (49-189)||(10439655-10439791)
chr1 (78-141)||(35925707-35925770)
chr1 (108-198)||(27738200-27738290)
chr1 (111-177)||(44422680-44422746)
chr1 (78-139)||(4699605-4699666)
chr1 (84-189)||(7218070-7218175)
chr1 (44-198)||(31517700-31517850)
chr1 (105-189)||(15361682-15361766)
chr1 (78-158)||(27140478-27140558)
chr1 (78-170)||(28482223-28482315)
chr1 (79-198)||(35080060-35080180)
chr1 (105-189)||(45205037-45205121)
chr1 (43-131)||(6976952-6977035)
chr1 (110-189)||(48830098-48830177)
chr1 (105-163)||(4700083-4700141)
chr1 (113-195)||(5150900-5150982)
chr1 (95-189)||(9656619-9656713)
chr1 (78-226)||(26184683-26184828)
chr1 (84-189)||(10199404-10199509)
chr1 (86-163)||(14629964-14630041)
chr1 (113-225)||(30259511-30259624)
chr1 (105-198)||(34179889-34179982)
chr1 (84-229)||(45999284-45999429)
chr1 (105-189)||(16322818-16322902)
chr1 (112-151)||(3924631-3924670)
chr1 (78-133)||(6292518-6292573)
chr1 (78-197)||(7262508-7262627)
chr1 (105-140)||(24146297-24146332)
chr1 (53-119)||(4481969-4482031)
chr1 (105-198)||(11211078-11211171)
chr1 (78-131)||(11639406-11639459)
chr1 (58-140)||(15437981-15438059)
chr1 (52-93)||(17009550-17009591)
chr1 (114-187)||(26630434-26630507)
chr1 (78-163)||(37842345-37842430)
chr1 (78-221)||(3887621-3887765)
chr1 (165-221)||(6976885-6976941)
chr1 (113-189)||(15566661-15566737)
chr1 (44-189)||(15581223-15581364)
chr1 (64-189)||(17628568-17628689)
chr1 (85-169)||(25479570-25479654)
chr1 (84-188)||(27887114-27887218)
chr1 (78-171)||(28689442-28689537)
chr1 (85-141)||(28935873-28935929)
chr1 (87-227)||(44031998-44032138)
[»] chr7 (39 HSPs)
chr7 (44-226)||(28165023-28165201)
chr7 (49-189)||(48157085-48157221)
chr7 (42-176)||(33645918-33646049)
chr7 (90-200)||(38010672-38010782)
chr7 (49-120)||(36598321-36598388)
chr7 (95-189)||(40688993-40689087)
chr7 (44-186)||(44151436-44151578)
chr7 (78-227)||(3610730-3610879)
chr7 (105-226)||(27378845-27378965)
chr7 (114-198)||(17989049-17989133)
chr7 (111-195)||(23721469-23721553)
chr7 (111-163)||(30812143-30812195)
chr7 (78-189)||(12110329-12110440)
chr7 (78-177)||(28702731-28702829)
chr7 (78-164)||(44615094-44615180)
chr7 (88-189)||(24363601-24363702)
chr7 (107-188)||(47177606-47177687)
chr7 (111-227)||(27548194-27548310)
chr7 (146-226)||(31002693-31002773)
chr7 (105-165)||(46056027-46056087)
chr7 (119-198)||(5006540-5006619)
chr7 (85-152)||(9423591-9423658)
chr7 (78-149)||(12234879-12234950)
chr7 (49-133)||(22387861-22387941)
chr7 (114-189)||(29363487-29363562)
chr7 (43-78)||(39591457-39591492)
chr7 (100-151)||(40439061-40439112)
chr7 (44-227)||(4966087-4966266)
chr7 (134-227)||(5369737-5369828)
chr7 (84-130)||(27517852-27517898)
chr7 (119-189)||(28340427-28340497)
chr7 (44-115)||(36537951-36538018)
chr7 (106-151)||(39505963-39506008)
chr7 (114-158)||(3968783-3968827)
chr7 (111-227)||(11208380-11208496)
chr7 (49-81)||(17944862-17944894)
chr7 (78-158)||(18749807-18749887)
chr7 (114-198)||(22759146-22759230)
chr7 (106-189)||(46825067-46825151)
[»] chr2 (48 HSPs)
chr2 (49-189)||(33942119-33942257)
chr2 (79-198)||(1939323-1939442)
chr2 (90-200)||(22681187-22681297)
chr2 (48-198)||(1741996-1742142)
chr2 (111-227)||(17952723-17952840)
chr2 (86-226)||(18962035-18962176)
chr2 (84-189)||(35485886-35485991)
chr2 (84-189)||(44458334-44458439)
chr2 (119-227)||(10143103-10143211)
chr2 (87-175)||(10198479-10198567)
chr2 (85-189)||(43173191-43173295)
chr2 (78-133)||(27237883-27237938)
chr2 (78-221)||(43985146-43985289)
chr2 (52-227)||(9478230-9478401)
chr2 (105-189)||(7103499-7103584)
chr2 (121-198)||(37292380-37292457)
chr2 (110-190)||(6167305-6167385)
chr2 (78-189)||(29316765-29316876)
chr2 (54-141)||(15120200-15120283)
chr2 (78-139)||(41817187-41817248)
chr2 (113-186)||(43205281-43205354)
chr2 (100-152)||(3067391-3067443)
chr2 (105-157)||(3078657-3078709)
chr2 (135-227)||(3673738-3673830)
chr2 (78-222)||(5133708-5133852)
chr2 (106-198)||(11513858-11513950)
chr2 (84-224)||(12215741-12215881)
chr2 (119-227)||(28803537-28803645)
chr2 (44-141)||(34651996-34652089)
chr2 (44-125)||(41809205-41809282)
chr2 (78-161)||(32821806-32821889)
chr2 (78-189)||(33256709-33256820)
chr2 (114-189)||(43141840-43141915)
chr2 (78-189)||(44438829-44438940)
chr2 (78-172)||(18179230-18179324)
chr2 (136-214)||(44439408-44439486)
chr2 (78-131)||(1647263-1647316)
chr2 (84-189)||(6993720-6993825)
chr2 (78-219)||(25790065-25790206)
chr2 (85-138)||(31228834-31228887)
chr2 (78-130)||(8820282-8820334)
chr2 (144-228)||(25609726-25609810)
chr2 (155-227)||(28902008-28902080)
chr2 (108-168)||(32848898-32848958)
chr2 (113-189)||(36863650-36863726)
chr2 (105-189)||(42817393-42817477)
chr2 (100-152)||(43259840-43259892)
chr2 (107-163)||(44238053-44238109)
[»] chr8 (64 HSPs)
chr8 (105-227)||(28769356-28769478)
chr8 (78-226)||(29973013-29973162)
chr8 (78-227)||(39551199-39551348)
chr8 (105-226)||(4558730-4558851)
chr8 (51-189)||(30191108-30191242)
chr8 (84-152)||(20672756-20672824)
chr8 (78-189)||(42215296-42215407)
chr8 (100-170)||(31705073-31705143)
chr8 (105-227)||(38036129-38036251)
chr8 (44-158)||(11569417-11569527)
chr8 (105-198)||(42370378-42370471)
chr8 (88-184)||(10075551-10075647)
chr8 (78-138)||(41606893-41606953)
chr8 (106-189)||(2093248-2093331)
chr8 (106-189)||(6864477-6864560)
chr8 (84-247)||(11795003-11795166)
chr8 (78-189)||(29262864-29262975)
chr8 (119-226)||(34770824-34770931)
chr8 (113-172)||(44865589-44865648)
chr8 (78-148)||(3254235-3254305)
chr8 (51-158)||(5069697-5069800)
chr8 (105-227)||(11188172-11188294)
chr8 (116-189)||(9836882-9836955)
chr8 (84-189)||(12361161-12361266)
chr8 (113-226)||(13652147-13652260)
chr8 (113-226)||(13710790-13710903)
chr8 (87-227)||(26056016-26056157)
chr8 (105-158)||(30277262-30277315)
chr8 (154-251)||(36337966-36338063)
chr8 (154-247)||(42597312-42597405)
chr8 (78-122)||(926511-926555)
chr8 (113-189)||(6509328-6509404)
chr8 (105-189)||(7918790-7918874)
chr8 (84-140)||(25869262-25869318)
chr8 (44-136)||(26410301-26410390)
chr8 (100-227)||(26716450-26716575)
chr8 (78-162)||(43504747-43504831)
chr8 (78-161)||(11183542-11183625)
chr8 (106-189)||(27728039-27728122)
chr8 (136-227)||(35869768-35869859)
chr8 (105-171)||(7645965-7646031)
chr8 (50-141)||(7918412-7918499)
chr8 (105-163)||(8062324-8062382)
chr8 (84-198)||(21653041-21653155)
chr8 (55-141)||(29973168-29973251)
chr8 (49-163)||(30987956-30988067)
chr8 (123-225)||(31884527-31884629)
chr8 (105-151)||(39881769-39881815)
chr8 (85-130)||(2235653-2235698)
chr8 (84-141)||(2458562-2458619)
chr8 (78-143)||(11185236-11185301)
chr8 (165-226)||(12224976-12225037)
chr8 (106-187)||(30013189-30013270)
chr8 (44-117)||(2487968-2488037)
chr8 (84-136)||(2492958-2493010)
chr8 (107-163)||(5227530-5227586)
chr8 (44-80)||(7853686-7853722)
chr8 (155-219)||(13410262-13410326)
chr8 (44-76)||(21130690-21130722)
chr8 (167-227)||(26215427-26215487)
chr8 (112-176)||(29169121-29169185)
chr8 (53-130)||(31875564-31875637)
chr8 (85-189)||(34849072-34849176)
chr8 (115-171)||(43709260-43709316)
[»] chr5 (48 HSPs)
chr5 (49-198)||(14295466-14295611)
chr5 (154-241)||(35135728-35135815)
chr5 (49-149)||(2468440-2468537)
chr5 (44-151)||(37611175-37611278)
chr5 (44-151)||(37787905-37788008)
chr5 (78-227)||(39105395-39105545)
chr5 (105-222)||(16889671-16889788)
chr5 (78-187)||(17368647-17368756)
chr5 (49-171)||(37526164-37526282)
chr5 (49-171)||(37588325-37588443)
chr5 (84-188)||(17258879-17258983)
chr5 (56-221)||(32172590-32172751)
chr5 (78-177)||(36542272-36542371)
chr5 (122-227)||(3951548-3951651)
chr5 (106-227)||(29588811-29588931)
chr5 (53-198)||(28586735-28586876)
chr5 (111-159)||(29844970-29845018)
chr5 (84-152)||(36774703-36774771)
chr5 (78-188)||(41957441-41957551)
chr5 (44-251)||(4855605-4855805)
chr5 (112-173)||(32408616-32408677)
chr5 (51-189)||(35960383-35960516)
chr5 (105-173)||(6183429-6183497)
chr5 (113-189)||(26516369-26516445)
chr5 (78-138)||(28413274-28413334)
chr5 (108-163)||(29201528-29201583)
chr5 (114-189)||(30217051-30217126)
chr5 (48-152)||(35095750-35095850)
chr5 (119-198)||(38047886-38047965)
chr5 (78-132)||(499721-499775)
chr5 (78-227)||(9202737-9202887)
chr5 (105-163)||(18853006-18853064)
chr5 (100-198)||(35550909-35551006)
chr5 (86-152)||(36638753-36638819)
chr5 (149-195)||(39941804-39941850)
chr5 (78-227)||(40205064-40205211)
chr5 (78-163)||(2568653-2568738)
chr5 (78-151)||(2880537-2880610)
chr5 (53-159)||(4619706-4619808)
chr5 (145-198)||(38766900-38766953)
chr5 (154-195)||(39941694-39941735)
chr5 (78-134)||(1899178-1899234)
chr5 (165-225)||(7096204-7096264)
chr5 (105-189)||(10272448-10272532)
chr5 (124-168)||(10391331-10391375)
chr5 (100-227)||(16944995-16945120)
chr5 (111-171)||(35553211-35553271)
chr5 (146-198)||(39750103-39750155)
[»] scaffold0275 (1 HSPs)
scaffold0275 (90-227)||(2762-2899)
[»] scaffold0590 (1 HSPs)
scaffold0590 (154-227)||(1140-1213)
[»] scaffold0608 (1 HSPs)
scaffold0608 (53-119)||(9606-9668)
[»] scaffold0584 (1 HSPs)
scaffold0584 (105-186)||(1350-1430)
[»] scaffold0549 (2 HSPs)
scaffold0549 (154-227)||(1790-1863)
scaffold0549 (154-227)||(3880-3953)
[»] scaffold0446 (1 HSPs)
scaffold0446 (105-186)||(5476-5556)
[»] scaffold0091 (1 HSPs)
scaffold0091 (107-163)||(6947-7003)


Alignment Details
Target: chr6 (Bit Score: 587; Significance: 0; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 587; E-Value: 0
Query Start/End: Original strand, 10 - 642
Target Start/End: Original strand, 30522365 - 30522994
Alignment:
Q  10 atcatcacacacaattgaattcaattcaccgtaaacttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttt 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||| |    
T  30522365 atcatcacacacaattgaattcaattcaccgtaaacttatgagactgtttgagagagctt---gaaacaaacatcttatgacatgttcaaaagccgttgt 30522461  T
Q  110 tagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatc 209  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30522462 tagcttatttgcataaactctccaggatagctaataaaagcagattatagcttatatgaaaatagtttcactttattttaaattttgttttggaagtatc 30522561  T
Q  210 ttatacataagcacttatgccttaagcacttaattaagttgtatatttaaacttggcttagatcaaatatttgagagttgaaatgaggagtattacagca 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30522562 ttatacataagcacttatgccttaagcacttaattaagttgtatatctaaacttggcttagatcaaatatttgagagttgaaatgaggagtattacagca 30522661  T
Q  310 tataggatggtaaaaagctcctctgatgattgtatcttccacttttcaaaatcattttctgtgaaggctgctatgaccaagaattgtatcaatccaaaga 409  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30522662 tataggatggtaaaaagctcctctgatgattgtatcttccacttttcaaaatcattttctgtgaaggctgctatgatcaagaattgtatcaatccaaaga 30522761  T
Q  410 aacatgtaaatgatgtcagtgtgagttttgctggatactttttcaccaccggagcctgcataagattattcactttgcaatttaggttatgaaaattgat 509  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30522762 aacatgtaaatgatgtcagtgtgagttttgctggatacttcttcaccaccggagcctgcataagattattcactttgcaatttaggttatgaaaattgat 30522861  T
Q  510 cattttgaacatgccaagtgcaatagcattaaacacaatgaagttacttaaaagttatttgtaaaatgtacaagaattatggatattttttgctataacc 609  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30522862 cattttgaacatgccaagtgcaatagcattaaacacaatgaagttacttaaaagttatttgtaaaatgtacaagaattatggatattttttgctataacc 30522961  T
Q  610 gagatcgaatggactaatgacctgacttgtgta 642  Q
    ||||||| |||||||||||||||||||||||||    
T  30522962 gagatcggatggactaatgacctgacttgtgta 30522994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 25426222 - 25426139
Alignment:
Q  106 tttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    |||||| |||||||| ||||| |||||||||||||| ||||||| || |||||||||||||||||  | ||| |||||||||||    
T  25426222 tttttaacttatttctataaattctccaggatagcttataaaaatagcttatagcttacatgaaagcaatttgactttatttta 25426139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 28641739 - 28641850
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| ||||| ||||||||| |||| ||||||||||||||| ||||| |||| ||| ||||||| | ||||||| |||||||||| |  |||| || ||    
T  28641739 aaacagcttataacatgttcataagctgtttttagcttattttcataagctctgcagaatagctattgaaaacagtttatagcttaaactaaaacagatt 28641838  T
Q  178 cactttatttta 189  Q
     |||||||||||    
T  28641839 gactttatttta 28641850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 198
Target Start/End: Original strand, 281808 - 281958
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 143  Q
    |||| |||||||||||| ||||||| |||||| |||    ||||||||||||  | |||  ||||| ||||||||||||| | ||||| ||||||||| |    
T  281808 acttgtgagactgtttgggagagctaatggaagcaa----cttatgacatgtctataagttgttttcagcttatttccatgagctctctaggatagctta 281903  T
Q  144 taaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 198  Q
    | || |||| |||||||||| ||||||| |  || |||||||||||  |||||||    
T  281904 tgaacacagcttatagcttatatgaaaacaagttgactttattttatcttttgtt 281958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 250
Target Start/End: Complemental strand, 4006766 - 4006622
Alignment:
Q  106 tttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaag 205  Q
    |||| ||||||||| ||||| |||||  |||||||| || ||||||  |||||||||| || |||| | ||| |||||||||||   |||||| | |||     
T  4006766 ttttcagcttattttcataacctctcagggatagcttatgaaaacaacttatagcttatataaaaacaatttgactttattttatcatttgttatagaaa 4006667  T
Q  206 tatcttatacataagcacttatgccttaagcacttaattaagttg 250  Q
    |||||||| |||||||||||||||  ||||   ||||||||||||    
T  4006666 tatcttatgcataagcacttatgctataagggattaattaagttg 4006622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 27693399 - 27693540
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 143  Q
    |||| ||||||| |||||||||  ||||||||||||    ||||||||||||||| ||||  |||| |  | |||||| ||||||||| ||||| || ||    
T  27693399 acttgtgagactatttgagagaatttatggaaacaa----cttatgacatgttcataagctattttcaagtaatttccgtaaactctctaggattgcaaa 27693494  T
Q  144 taaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    | ||| ||| ||| |||||| ||||||||| ||| |||||||||||    
T  27693495 tgaaatcagcttacagcttatatgaaaataatttgactttatttta 27693540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 10452426 - 10452496
Alignment:
Q  154 ttatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcact 224  Q
    |||||||||| ||||||||||||| | ||||||||| |||||||| | ||| || ||||||||||||||||    
T  10452426 ttatagcttatatgaaaatagtttgattttattttatattttgttatagaaatagcttatacataagcact 10452496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 100 - 189
Target Start/End: Complemental strand, 2117461 - 2117372
Alignment:
Q  100 aagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    |||| |||||||||||||||| |||| ||||| |||||| || || ||||||  |||||| ||| ||||||||||||| ||||| |||||    
T  2117461 aagctgtttttagcttatttcaataagctctctaggataacttatgaaaacaacttatagattatatgaaaatagtttgactttgtttta 2117372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 4420734 - 4420660
Alignment:
Q  63 agagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagct 141  Q
    ||||||||| ||||||||    |||||||||||||| |||| ||||| ||||||||||||||| ||||||| |||||||    
T  4420734 agagcttatagaaacaaa----ttatgacatgttcataagctgttttcagcttatttccataagctctccaagatagct 4420660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 32171349 - 32171447
Alignment:
Q  50 gagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaa 149  Q
    ||||||||||||||||||||||| |||||     ||||||||| || || ||||  |||| ||||||||||||||| || ||||||||| ||||| ||||    
T  32171349 gagactgtttgagagagcttatgaaaacag----cttatgacaagtccagaagctattttcagcttatttccataagctatccaggataactaatgaaaa 32171444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 32171520 - 32171455
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaa 170  Q
    ||||| ||||||||||||||| |||||||||||| || |  |||||||||||||||||| ||||||    
T  32171520 gttttcagcttatttccataagctctccaggataccttactaaaacagattatagcttatatgaaa 32171455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 198
Target Start/End: Original strand, 2027396 - 2027516
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| |||||||||| | || |||| ||||| |||||||||   |||||||| || | ||||| || | ||||| |||||| ||| |||||||||||||    
T  2027396 aaacagcttatgacatttccataagctgttttcagcttatttatttaaactctacatgctagcttatgagaacagcttataggttatatgaaaatagttt 2027495  T
Q  178 cactttattttaaattttgtt 198  Q
     |||||||||||  |||||||    
T  2027496 gactttattttatcttttgtt 2027516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 27595527 - 27595668
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 143  Q
    ||||||||||||||||| ||||  ||||||||||||    ||||||||||||||| ||||  |||| |  | |||||| ||||||||| ||||| || ||    
T  27595527 acttatgagactgtttgggagaatttatggaaacaa----cttatgacatgttcataagctattttcaagtaatttccgtaaactctctaggattgcaaa 27595622  T
Q  144 taaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    | |||  |  ||| |||||| ||||||||| ||| |||||||||||    
T  27595623 tgaaattaacttacagcttatatgaaaataatttgactttatttta 27595668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 1403043 - 1402956
Alignment:
Q  111 agcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 198  Q
    |||| ||||| ||||  |||||| ||||||| || ||||||  |||||||||| ||||||||||||| |||||||||||  |||||||    
T  1403043 agctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaactttattttatcttttgtt 1402956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 34939824 - 34939761
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagct 141  Q
    ||||| |||||||||||| || ||   ||||| |||||||||||||||||||||||||||||||    
T  34939824 aaacagcttatgacatgtccataaattgttttcagcttatttccataaactctccaggatagct 34939761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 251
Target Start/End: Complemental strand, 8010437 - 8010264
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctt-acatgaaaatagtt 176  Q
    ||||| || |||||||||||| ||||  |||| || ||||||| ||||  ||||||||||| || || ||||||| ||||| ||| | |||||| ||| |    
T  8010437 aaacaactcatgacatgttcataagctattttcagtttatttctataagttctccaggataacttattaaaacagcttataacttaaaatgaaagtagat 8010338  T
Q  177 tcactttattttaaattttgttttggaagtatcttatacataagcacttatgccttaagcacttaattaagttgt 251  Q
    | |||||||||| | | ||||| | ||| || ||||||| |||||||||||    ||| ||||||||||||||||    
T  8010337 tgactttatttt-attgttgttatagaaatagcttatacctaagcacttatatgataaacacttaattaagttgt 8010264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 28088239 - 28088305
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaa 171  Q
    ||||| ||||||||||||| | ||||||| ||||||| || ||||||| |||||||||| |||||||    
T  28088239 gttttgagcttatttccatgagctctccatgatagcttatgaaaacagtttatagcttatatgaaaa 28088305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 187
Target Start/End: Complemental strand, 31324529 - 31324427
Alignment:
Q  85 ttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttta 184  Q
    ||||||||||||||||| | |||||   |||||||  |||| |||| || ||||||| || ||  ||| |||||||||||||||||||||||| || |||    
T  31324529 ttatgacatgttcaaaaactgttttagacttattttaataagctcttcatgatagcttatgaatgcagcttatagcttacatgaaaatagtttaacctta 31324430  T
Q  185 ttt 187  Q
    |||    
T  31324429 ttt 31324427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 33818088 - 33818134
Alignment:
Q  209 cttatacataagcacttatgccttaagcacttaattaagttgtatat 255  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||    
T  33818088 cttatacataagcacttatgctataaacacttaattaagttgtatat 33818134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 1275201 - 1275136
Alignment:
Q  106 tttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaa 171  Q
    |||| ||||||||||||||| |||||||||||| |  || ||||||| |||||||||| |||||||    
T  1275201 ttttcagcttatttccataagctctccaggataacatatgaaaacagcttatagcttatatgaaaa 1275136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 224
Target Start/End: Complemental strand, 6647461 - 6647323
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 183  Q
    ||||||||||||||| |||  ||||| | ||||||| ||||| ||||| | ||||||| || ||||||||||||| | || || ||| || ||| |||||    
T  6647461 cttatgacatgttcataagatgttttcaacttattttcataagctctctaagatagcttatgaaaacagattataacctatattaaagtaatttgacttt 6647362  T
Q  184 attttaaattttgttttggaagtatcttatacataagcact 224  Q
    |  |||  ||||||| | ||| || ||||||||||||||||    
T  6647361 a--ttattttttgttatagaaataacttatacataagcact 6647323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 163
Target Start/End: Complemental strand, 31624170 - 31624085
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 163  Q
    ||||| ||||||||||||||| |||| ||||| | ||||||| |||||  |||||| ||||||  || ||||||| ||||||||||    
T  31624170 aaacagcttatgacatgttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaacagcttatagctta 31624085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 34939612 - 34939530
Alignment:
Q  55 tgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagct 141  Q
    |||||||||||||||||||||||||    ||||||||| || |  |||  ||||| ||||||||||||||| |||| ||||||||||    
T  34939612 tgtttgagagagcttatggaaacaa----cttatgacacgtccgtaagttgttttcagcttatttccataacctcttcaggatagct 34939530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 44 - 133
Target Start/End: Original strand, 2460111 - 2460196
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctcca 133  Q
    |||| |||||||||||||||||||||||||||||||    ||||||||||||    |||  ||||| | ||||||||||||| |||||||    
T  2460111 acttgtgagactgtttgagagagcttatggaaacaa----cttatgacatgtctttaagttgttttcaacttatttccataagctctcca 2460196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 3168257 - 3168341
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatga 168  Q
    |||||||||||| ||   || ||||| ||||||||||| ||| ||||||||||||||| |  ||||||| |||||||||| ||||    
T  3168257 cttatgacatgtccatcggctgttttcagcttatttccttaagctctccaggatagcttaagaaaacagtttatagcttatatga 3168341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 7785734 - 7785843
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| ||||||||||||  | |||  ||||| ||||||||||||||| |||||||  |||||  || || |||  |||||||||| ||||||| |||||    
T  7785734 aaacagcttatgacatgtctataagttgttttcagcttatttccataagctctccaaaatagc--atgaagacaatttatagcttatatgaaaagagttt 7785831  T
Q  178 cactttatttta 189  Q
     |||||||||||    
T  7785832 gactttatttta 7785843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 9041467 - 9041511
Alignment:
Q  119 tccataaactctccaggatagctaataaaaacagattatagctta 163  Q
    ||||||| ||||||| |||||||||||||||||| ||||||||||    
T  9041467 tccataagctctccacgatagctaataaaaacagcttatagctta 9041511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 32386523 - 32386664
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 143  Q
    |||| |||||| |||||| |||||||||||||| |    |||||| |||||| || ||   ||||| ||||||||| ||||| |||||||||||| ||||    
T  32386523 acttgtgagaccgtttgaaagagcttatggaaata----tcttataacatgtccacaacttgttttcagcttattttcataagctctccaggataactaa 32386618  T
Q  144 taaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    | ||||||   |||| |||| ||||||| | ||| || ||||||||    
T  32386619 tgaaaacaacgtataccttatatgaaaacaatttgaccttatttta 32386664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 3785734 - 3785801
Alignment:
Q  122 ataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    |||| |||||||| |||||| | |||||||| |||||||||| | ||||| ||||| |||||||||||    
T  3785734 ataagctctccagaatagcttacaaaaacagcttatagcttatacgaaaacagtttaactttatttta 3785801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 17241254 - 17241313
Alignment:
Q  90 acatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaa 149  Q
    ||||||||| |||  ||||| | ||||||||||||||||||||| |||||||||| ||||    
T  17241254 acatgttcataagttgttttcaacttatttccataaactctccaagatagctaatgaaaa 17241313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 84 - 226
Target Start/End: Complemental strand, 2514776 - 2514634
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 183  Q
    |||||||||| |||| |||| |||||   |||| ||||| ||  ||||||||| |||| || |||| |  |||||||| | || ||| |||||| |||||    
T  2514776 cttatgacatattcataagctgttttcgtcttacttccaaaagatctccaggacagcttatgaaaataacttatagctcatataaaattagtttgacttt 2514677  T
Q  184 attttaaattttgttttggaagtatcttatacataagcactta 226  Q
    ||||||  |||| || | ||| || ||||||||||||||||||    
T  2514676 attttatcttttattatagaaatagcttatacataagcactta 2514634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 7945901 - 7945954
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatag 159  Q
    ||||| ||||||||||||||| ||||||||||||||| || ||||||| ||||||    
T  7945901 gttttaagcttatttccataagctctccaggatagct-atgaaaacaggttatag 7945954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 219
Target Start/End: Original strand, 33787762 - 33787876
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaa 204  Q
    ||||| ||| ||||||||||| ||||||| |||| || || ||||||| ||||| |||| ||||||  | ||| ||||| ||||| |||||||| | |||    
T  33787762 gttttcagcctatttccataagctctccaagataacttatgaaaacagcttataacttatatgaaatcaatttgactttgttttatattttgttatagaa 33787861  T
Q  205 gtatcttatacataa 219  Q
     ||  ||||||||||    
T  33787862 atagtttatacataa 33787876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 170
Target Start/End: Complemental strand, 2023676 - 2023558
Alignment:
Q  49 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaata-aa 147  Q
    ||||||||||| ||||||||| |||||||||    |||||||| || ||| || | ||||| |||||||||| |||| ||||||| || || | ||| ||    
T  2023676 tgagactgtttcagagagcttgtggaaacaa----cttatgacctgatcacaaactgttttcagcttatttctataagctctccaagaaagtttatagaa 2023581  T
Q  148 aacagattatagcttacatgaaa 170  Q
    || || |||||||||| ||||||    
T  2023580 aatagcttatagcttatatgaaa 2023558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 189
Target Start/End: Complemental strand, 3155249 - 3155145
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 183  Q
    ||||||||||||  | |||| ||||| ||||||||||||| | |||||||||||| || || |||| || |||||| ||| ||| ||| ||||| |||||    
T  3155249 cttatgacatgtctataagctgttttcagcttatttccat-agctctccaggatatcttatgaaaatagcttataggttatatggaaacagtttgacttt 3155151  T
Q  184 atttta 189  Q
     |||||    
T  3155150 gtttta 3155145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 5564122 - 5564191
Alignment:
Q  82 atcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaaca 151  Q
    |||||||||||||| | ||||| ||||| ||||||||| |||||||||| || || |||| || ||||||    
T  5564122 atcttatgacatgtccgaaagctgttttcagcttatttgcataaactcttcaagacagcttatgaaaaca 5564191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 11340691 - 11340764
Alignment:
Q  154 ttatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcacttat 227  Q
    ||||||| || |||||||||  || |||||||||||  ||||||| | ||| ||||||||| ||||||||||||    
T  11340691 ttatagcgtatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataagcacttat 11340764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 141
Target Start/End: Original strand, 32577957 - 32578039
Alignment:
Q  55 tgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagct 141  Q
    |||||||||||||||||| ||||||    |||||||||||| |   ||| ||||| ||||||||||||||  |||| ||||||||||    
T  32577957 tgtttgagagagcttatgaaaacaa----cttatgacatgtccttgagctgttttcagcttatttccatatgctcttcaggatagct 32578039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 27909636 - 27909700
Alignment:
Q  86 tatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaac 150  Q
    |||||||||| || |||  ||||| ||||||||||||||| |||||||| | |||| ||||||||    
T  27909636 tatgacatgtccataagttgttttcagcttatttccataagctctccagtaaagcttataaaaac 27909700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 29274287 - 29274363
Alignment:
Q  146 aaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagca 222  Q
    ||||||| |||||||||| ||||||| | ||| |||||||||||  ||||| | | ||| || ||||||||||||||    
T  29274287 aaaacagtttatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataagca 29274363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 2e-26; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 78 - 227
Target Start/End: Complemental strand, 21157848 - 21157699
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| |||||||||| | ||||||| ||||||||||||||||||||| |||| |||||||||  || ||||||  |||||||||||||||||| |||||    
T  21157848 aaacagcttatgacatttacaaaagctgtttttagcttatttccataagctcttcaggatagcatatgaaaacatcttatagcttacatgaaaacagttt 21157749  T
Q  178 cactttattttaaattttgttttggaagtatcttatacataagcacttat 227  Q
     |||||| |||| | |||||| |  || || || ||||||||||||||||    
T  21157748 gactttagtttatactttgttatcaaaatagctgatacataagcacttat 21157699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 7694009 - 7694085
Alignment:
Q  87 atgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 163  Q
    |||||||||||| |||  ||||| |||||||||||||||||||||||||||| || || ||||||| ||||||||||    
T  7694009 atgacatgttcataagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatagctta 7694085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 44 - 223
Target Start/End: Complemental strand, 2996683 - 2996508
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 143  Q
    |||| |||||||||||||||||||||||| ||||||    |||||||||||| || ||||  |||| | ||||||| ||||  ||||||| ||||||| |    
T  2996683 acttttgagactgtttgagagagcttatgaaaacaa----cttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagctta 2996588  T
Q  144 taaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcac 223  Q
    | ||||||  ||||| |||| || |||| | ||| ||| |||||||  || |||| | |||||| ||||| |||||||||    
T  2996587 tgaaaacaacttataacttatataaaaacaatttgactgtattttatcttatgttatcgaagtagcttattcataagcac 2996508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 85 - 227
Target Start/End: Original strand, 54325034 - 54325176
Alignment:
Q  85 ttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttta 184  Q
    |||||| |||| || |||| ||||| || |||| ||||||||||||||| |||||||  | |||| || |||||||||| ||||||| ||||| ||||||    
T  54325034 ttatgatatgtccataagctgttttcagtttatctccataaactctccatgatagcttttgaaaatagcttatagcttatatgaaaacagtttgacttta 54325133  T
Q  185 ttttaaattttgttttggaagtatcttatacataagcacttat 227  Q
    |||||  ||||||  | ||| ||  ||||||| ||||||||||    
T  54325134 ttttatcttttgtaatagaaatagtttatacacaagcacttat 54325176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 30338615 - 30338727
Alignment:
Q  112 gcttatttccataaactctccaggatagctaat-aaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatct 210  Q
    |||||||| ||||||||||||| || |||| || |||||||| |||||||||| ||||||| ||||| |||||||| ||  ||||||| | ||| ||  |    
T  30338615 gcttattttcataaactctccaagagagcttatgaaaaacagtttatagcttatatgaaaacagtttaactttattctatcttttgttatagaaatagtt 30338714  T
Q  211 tatacataagcac 223  Q
    |||||||||||||    
T  30338715 tatacataagcac 30338727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 30581702 - 30581778
Alignment:
Q  113 cttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||||||||||||||||||| |||| || || ||||||| |||||||||| | ||||||||||| |||| ||||||    
T  30581702 cttatttccataaactctccaagataacttattaaaacagcttatagcttatacgaaaatagtttgacttcatttta 30581778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 227
Target Start/End: Original strand, 30207583 - 30207709
Alignment:
Q  100 aagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttt 199  Q
    |||| ||||| ||||||||||||||| ||||| | | ||||| || ||||||  |||||||||| ||||||| ||||| | |||||||||  |||||||     
T  30207583 aagctgttttcagcttatttccataatctctctaaggtagcttatgaaaacaacttatagcttatatgaaaacagtttga-tttattttattttttgtta 30207681  T
Q  200 tggaagtatcttatacataagcacttat 227  Q
    | ||| || | |||||||||||||||||    
T  30207682 tagaactaacatatacataagcacttat 30207709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 224
Target Start/End: Complemental strand, 49219192 - 49219073
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaa 204  Q
    ||||| ||||||||||||||| ||||  | ||||| | || ||||||  |||||||||| ||||||||| ||| ||||||||||| |||||||| | |||    
T  49219192 gttttcagcttatttccataatctctttaagatagtttatgaaaacaacttatagcttatatgaaaataatttgactttattttatattttgttatagaa 49219093  T
Q  205 gtatcttatacataagcact 224  Q
     || ||||||| ||| ||||    
T  49219092 ataacttatacctaaccact 49219073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 23819169 - 23819023
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| |||||||||||| || |||  ||||| | |||||||| |||| |||| || ||||||| || ||||||  ||||| |||| ||||||| |||||    
T  23819169 aaacagcttatgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttatgaaaacatgttataacttatatgaaaacagttt 23819070  T
Q  178 cactttattttaaattttgttttggaagtatcttatacataagcactt 225  Q
     |||  |||||| | |||||| ||||| || ||||||||||| |||||    
T  23819069 gactacattttata-tttgttatggaaataacttatacataaacactt 23819023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 29467620 - 29467675
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatag 139  Q
    |||||||||||| || |||| ||||| ||||||||||||||||||||| |||||||    
T  29467620 cttatgacatgtccataagctgttttcagcttatttccataaactctctaggatag 29467675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 140
Target Start/End: Original strand, 6987706 - 6987793
Alignment:
Q  49 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagc 140  Q
    |||||||||||| ||||||||||||| ||||    |||||||||||| || || |  |||| | ||||||||||||| ||||||||||||||    
T  6987706 tgagactgtttgggagagcttatggatacaa----cttatgacatgtccataaactattttcaacttatttccataagctctccaggatagc 6987793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 24091504 - 24091434
Alignment:
Q  117 tttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattt 187  Q
    |||||||||||  ||||||||| || || ||||||| |||||||||| ||||||||| ||| |||||||||    
T  24091504 tttccataaaccttccaggataacttatgaaaacagtttatagcttatatgaaaataatttgactttattt 24091434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 177
Target Start/End: Original strand, 26747402 - 26747492
Alignment:
Q  88 tgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattat-agcttacatgaaaatagttt 177  Q
    ||||||||||| ||||  ||||||||||||||||||||  |||  |||||| ||||| ||||||  |||| |||||| |||||||||||||    
T  26747402 tgacatgttcataagctttttttagcttatttccataagttctttaggataactaatgaaaacaacttataagcttatatgaaaatagttt 26747492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 20936219 - 20936280
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatag 139  Q
    ||||| ||||||| ||||||| |||| ||||| | ||||||||||||| |||||||||||||    
T  20936219 aaacaacttatgatatgttcataagctgttttcaccttatttccataatctctccaggatag 20936280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 219
Target Start/End: Complemental strand, 35958691 - 35958594
Alignment:
Q  122 ataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataa 219  Q
    |||||||||||||||||||| || ||||||| || ||||||| || |||  | ||| |||||||||||| || |||| | ||| || |||||||||||    
T  35958691 ataaactctccaggatagcttatgaaaacagcttctagcttatataaaacaaatttgactttattttaacttatgttatagaaatagcttatacataa 35958594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 157
Target Start/End: Original strand, 17975386 - 17975438
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattat 157  Q
    |||||||||||||||||| || ||||||| ||||||| |||||||||| ||||    
T  17975386 gtttttagcttatttccagaagctctccaagatagcttataaaaacagcttat 17975438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 18011929 - 18011877
Alignment:
Q  100 aagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 152  Q
    |||||||||||||||||||| |||||||||| || ||||||| || |||||||    
T  18011929 aagccgtttttagcttattttcataaactcttcaagatagcttatgaaaacag 18011877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 250
Target Start/End: Original strand, 21593002 - 21593173
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaac-----aga-ttatagcttacatgaaaatagttt 177  Q
    ||||||||||||| | |||| | ||| ||||||||||||||||| | ||||||||||| ||  ||||     | | |||||||||| |||||||||| ||    
T  21593002 cttatgacatgtttataagctgctttcagcttatttccataaacacgccaggatagcttatcgaaaccacttatagttatagcttatatgaaaatag-tt 21593100  T
Q  178 cactttattttaaattttgttttggaagtatcttatacataagcacttatgccttaagcacttaattaagttg 250  Q
     |||||||||||  ||| ||| | ||| ||  ||||||||||||||||| ||  ||||||| ||||| |||||    
T  21593101 gactttattttatctttagttatagaaatagtttatacataagcacttacgctataagcacctaattcagttg 21593173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 44 - 133
Target Start/End: Original strand, 27123312 - 27123397
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctcca 133  Q
    |||| |||||||||||||||||||||||||||||||    ||||||||||||    |||  ||||| | ||||||||||||| |||||||    
T  27123312 acttgtgagactgtttgagagagcttatggaaacaa----cttatgacatgtctttaagttgttttcaacttatttccataagctctcca 27123397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 29601025 - 29601097
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| ||||||||| |||||  |||| ||||||||  || ||||||||||||||||| ||||||||| ||||    
T  29601025 gttttcagcttattttcataagttctctaggatagcatatgaaaacagattatagcttgcatgaaaatggttt 29601097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 227
Target Start/End: Original strand, 32066434 - 32066548
Alignment:
Q  111 agcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatct 210  Q
    ||||||| ||||||||||| | ||||||||| |||||||||| |||||||| | ||||| |  |||| | |||||||||  ||||||| |  |||||  |    
T  32066434 agcttatgtccataaactc-ctaggatagcttataaaaacagcttatagctcatatgaacacggtttaa-tttattttatcttttgttataaaagtagtt 32066531  T
Q  211 tatacataagcacttat 227  Q
    |||||||||||||||||    
T  32066532 tatacataagcacttat 32066548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 149
Target Start/End: Complemental strand, 1966021 - 1965950
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaa 149  Q
    ||||| ||||||||||||||| |||| ||||||| |||||||||| ||  | || ||||||||| |||||||    
T  1966021 aaacaacttatgacatgttcataagctgtttttaacttatttccagaagatttctaggatagcttataaaaa 1965950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 12650304 - 12650359
Alignment:
Q  108 tttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 163  Q
    ||||||| |||||||||| ||||||||||||| | || ||||||| ||||||||||    
T  12650304 tttagctaatttccataagctctccaggataggttatgaaaacagcttatagctta 12650359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 188
Target Start/End: Original strand, 18628560 - 18628643
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttt 188  Q
    ||||| ||||||||||||||| ||||||| |||| || || ||||||| ||||| |||| || |||| ||||| ||| ||||||    
T  18628560 gttttcagcttatttccataagctctccaagataacttatgaaaacagtttataacttatataaaaacagtttgactatatttt 18628643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 24444060 - 24443969
Alignment:
Q  136 atagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcacttat 227  Q
    |||||| || ||||||  |||||||||| |||||||| |||| | ||||||||| |||||||| | ||| |  |||||||||||| ||||||    
T  24444060 atagcttatgaaaacaacttatagcttatatgaaaattgtttgaatttattttatattttgttgtagaaatcgcttatacataagaacttat 24443969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 189
Target Start/End: Complemental strand, 29263450 - 29263339
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| ||||||| ||||||| |||  ||||| |||||||||||| || |||| |||||||||| || ||||||  |||| |||||  |||||| | | |    
T  29263450 aaacagcttatgatatgttcataagttgttttcagcttatttccacaagctctgcaggatagcttatgaaaacaacttatcgcttatttgaaaacaatgt 29263351  T
Q  178 cactttatttta 189  Q
     |||||||||||    
T  29263350 aactttatttta 29263339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 20936070 - 20936112
Alignment:
Q  156 atagcttacatgaaaatagtttcactttattttaaattttgtt 198  Q
    |||||||||||||||||||||| |||||||||||  |||||||    
T  20936070 atagcttacatgaaaatagtttgactttattttatcttttgtt 20936112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 1137792 - 1137739
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctc 131  Q
    ||||||||||||||||||||| |||  ||||| || |||||||||||| |||||    
T  1137792 aaacatcttatgacatgttcataagttgttttcagtttatttccataagctctc 1137739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 1312921 - 1312860
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatag 139  Q
    ||||| ||||| |||| |||| || | ||||| ||||||||||||||||||||||| |||||    
T  1312921 aaacaacttattacatattcataaactgttttcagcttatttccataaactctccaagatag 1312860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 19429767 - 19429726
Alignment:
Q  100 aagccgtttttagcttatttccataaactctccaggatagct 141  Q
    |||| ||||| ||||||||||||||| |||||||||||||||    
T  19429767 aagctgttttcagcttatttccataagctctccaggatagct 19429726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 47970310 - 47970249
Alignment:
Q  166 tgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcacttat 227  Q
    |||||||||||| |||| ||||||  ||||||| | ||| || |||||||||||||||||||    
T  47970310 tgaaaatagtttgacttcattttatcttttgttatagaaatagcttatacataagcacttat 47970249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 56055803 - 56055723
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatt 186  Q
    ||||||| ||||||| ||||| || ||||||||||||| | |||| || |||||||||| |||||| |||||| | ||||||    
T  56055803 gtttttatcttattttcataagct-tccaggatagctagttaaaatagcttatagcttatatgaaagtagtttaagtttatt 56055723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 5131267 - 5131303
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagct 141  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  5131267 gttttcagcttatttccataagctctccaggatagct 5131303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 6978958 - 6979034
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagc 160  Q
    ||||||||||||  | |||| ||||| ||||||||| ||||||||||  ||||| ||| |||||||||  |||||||    
T  6978958 cttatgacatgtctataagctgttttcagcttattttcataaactctttaggatggcttataaaaacaacttatagc 6979034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 198
Target Start/End: Complemental strand, 24929573 - 24929453
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| |||||| |||||||| ||   ||||| ||||||||||||||| ||||| || | || | || ||||||  |||||||||  ||||||| ||||     
T  24929573 aaacagcttatggcatgttcataaattgttttcagcttatttccataagctctctagtagagtttatgaaaacaacttatagcttttatgaaaacagtta 24929474  T
Q  178 cactttattttaaattttgtt 198  Q
     |||||||||||  |||||||    
T  24929473 gactttattttatcttttgtt 24929453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 105 - 221
Target Start/End: Original strand, 27043847 - 27043963
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaa 204  Q
    ||||||||||||| | ||||   |||||| ||||| | |||||||||  |||||||||| | ||||| | ||| |||||||||||   |||||| |  ||    
T  27043847 gtttttagcttatattcatacgttctccaagatagtttataaaaacatcttatagcttatacgaaaacaatttaactttattttatcctttgttatataa 27043946  T
Q  205 gtatcttatacataagc 221  Q
    ||| |||||||||||||    
T  27043947 gtaccttatacataagc 27043963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 35064908 - 35064824
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||| ||||||||||||||||||||||| |||| || || |||||||  |||||| || |  |||| |||||  ||||||||||    
T  35064908 gttttcagcttatttccataaactctccatgatatcttatgaaaacagcatatagcctatacaaaaacagtttatctttatttta 35064824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 51630164 - 51630080
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||| ||||||||| |||||| ||| || ||||||| || |||| || |||||||||| || |||| | ||| |||||||||||    
T  51630164 gttttcagcttattttcataaattcttcaagatagcttatgaaaatagcttatagcttatatcaaaacaatttaactttatttta 51630080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 198
Target Start/End: Original strand, 52746830 - 52746950
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| |||| |||||||||| |||| ||||| |||| |||| ||||| |  | || ||||||| || ||||||| |||| |||||||  |||| | |||    
T  52746830 aaacagcttaagacatgttcataagctgttttcagctgattttcataagccttacaagatagcttatgaaaacagcttatggcttacacaaaaacaattt 52746929  T
Q  178 cactttattttaaattttgtt 198  Q
     |||||||||||  |||||||    
T  52746930 aactttattttatcttttgtt 52746950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 55547040 - 55547108
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 152  Q
    ||||||||||||  | |||  |||||||||||||||||||||||| | ||| |||||| || |||||||    
T  55547040 cttatgacatgtctataagttgtttttagcttatttccataaacttttcagcatagcttatgaaaacag 55547108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 7e-23; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 49 - 189
Target Start/End: Complemental strand, 21574595 - 21574460
Alignment:
Q  49 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaa 148  Q
    |||||||||||| ||||||||||| ||||||    ||||||||||||||| |||| | ||||||||||||||||||| ||||||| | ||||| ||||||    
T  21574595 tgagactgtttgggagagcttatgaaaacaa----cttatgacatgttcataagctgcttttagcttatttccataagctctccatgttagcttataaaa 21574500  T
Q  149 acagattatagcttacatgaaaatagtttcactttatttta 189  Q
    | || |||||||||| ||| ||| | ||| |||||||||||    
T  21574499 aaag-ttatagcttatatgtaaacaatttaactttatttta 21574460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 53 - 189
Target Start/End: Complemental strand, 2201236 - 2201097
Alignment:
Q  53 actgtttgagagagcttatggaaa---caaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaa 149  Q
    |||||||| |||||||||||||||    ||||| ||||||| ||||||| || |  |||| ||||| ||||| |||||| |||| |||||||||| ||||    
T  2201236 actgtttgggagagcttatggaaattggaaacaacttatgatatgttcataaactcttttcagcttttttccttaaactatccaagatagctaatgaaaa 2201137  T
Q  150 cagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||| |||||||||| ||||||| ||||| ||||| |||||    
T  2201136 cagcttatagcttatatgaaaacagtttgactttgtttta 2201097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 43 - 187
Target Start/End: Original strand, 25182946 - 25183087
Alignment:
Q  43 aacttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgttttt-agcttatttccataaactctccaggatagct 141  Q
    ||||| |||||||||||||||||||||||| ||||||    |||||||||| | || ||||  ||||| ||| |||||||| ||| | |||| |||||||    
T  25182946 aacttgtgagactgtttgagagagcttatgaaaacaa----cttatgacatatccataagctatttttcagcatatttccacaaattttccatgatagct 25183041  T
Q  142 aataaaaacagattatagcttacatgaaaatagtttcactttattt 187  Q
     || ||||||| |||||||| | |||||||||| || |||||||||    
T  25183042 tatgaaaacagcttatagctcatatgaaaatagcttaactttattt 25183087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 40122770 - 40122884
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaa 204  Q
    ||||||||||||||||||| |||| |  ||||||||| |||||||||  |||||||||  ||||||| ||||| |||||||||||  ||||||| | |||    
T  40122770 gtttttagcttatttccattaactttttaggatagcttataaaaacaacttatagctt-tatgaaaacagtttgactttattttatcttttgttattgaa 40122868  T
Q  205 gtatcttatacataag 220  Q
     || ||||||||||||    
T  40122869 atagcttatacataag 40122884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 105 - 183
Target Start/End: Original strand, 13709840 - 13709918
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 183  Q
    ||||| || ||||||| |||||||||||||||||||| || ||||||||||||| ||||||||||| | |||| |||||    
T  13709840 gttttcagtttatttcaataaactctccaggatagcttatgaaaacagattataccttacatgaaatttgtttgacttt 13709918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 14548681 - 14548804
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 143  Q
    |||| |||||||||||||||||||||||| ||||||    | |||||||| || | | || ||||| ||||||||||||||| |||||||| ||| || |    
T  14548681 acttgtgagactgtttgagagagcttatgaaaacaa----cgtatgacattttaataggctgttttcagcttatttccataagctctccagaataactta 14548776  T
Q  144 taaaaacagattatagcttacatgaaaa 171  Q
    | ||||||  |||||||||| |||||||    
T  14548777 tgaaaacaacttatagcttatatgaaaa 14548804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 78 - 227
Target Start/End: Original strand, 27290891 - 27291038
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| |||||||||||  || |||| ||||| ||||||||||||| |||||| |||||||||||||  |||||| || ||| ||| ||||||| ||||     
T  27290891 aaacagcttatgacatgcccataagctgttttcagcttatttccatgaactctgcaggatagctaatgcaaacagcttttagattatatgaaaaaagttc 27290990  T
Q  178 cactttattttaaattttgttttggaagtatcttatacataagcacttat 227  Q
     | ||||||||  || ||||| | ||| || ||||||| |||||||||||    
T  27290991 gaatttatttt--atcttgttatagaaataccttatacctaagcacttat 27291038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 105 - 227
Target Start/End: Complemental strand, 27792925 - 27792803
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaa 204  Q
    ||||| |||||||||| |||| |||| || ||||| | || ||||||  ||  |||||| ||||||||||||| || ||||||||  ||||||||| |||    
T  27792925 gttttcagcttatttctataagctctacatgatagtttatgaaaacaacttgcagcttatatgaaaatagtttgaccttattttatcttttgtttttgaa 27792826  T
Q  205 gtatcttatacataagcacttat 227  Q
     || |||||||||||||||||||    
T  27792825 atagcttatacataagcacttat 27792803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 78 - 226
Target Start/End: Original strand, 20192596 - 20192744
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| |||||||||||| || |||| ||||| | || |||||||||| |||||| | |||  | | |||||||| |||||| ||| |||||||  ||||    
T  20192596 aaacagcttatgacatgtccataagctgttttcaactcatttccataagctctcccgaataagttacaaaaacagcttatagattatatgaaaactgttt 20192695  T
Q  178 cactttattttaaattttgttttggaagtatcttatacataagcactta 226  Q
     |||||||||||  ||||||| |  || || ||||||||||||||||||    
T  20192696 gactttattttatcttttgttatataaatagcttatacataagcactta 20192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 24887300 - 24887384
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||| |||||||| |||||| ||||||||||||||| || ||||||| || ||||||| ||||| | ||||| |||||||||||    
T  24887300 gttttcagcttattcccataagctctccaggatagcttatgaaaacagcttttagcttatatgaatacagtttgactttatttta 24887384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 19679318 - 19679429
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| ||||||||||| | |||||| ||||  ||||||||||  | ||||||||| ||||| | |||||||||  |||||||||| | ||||| |||||    
T  19679318 aaacaacttatgacatgctaaaaagctgtttgcagcttatttcttttaactctccaagatagtttataaaaacaacttatagcttataagaaaacagttt 19679417  T
Q  178 cactttatttta 189  Q
     |||||||||||    
T  19679418 gactttatttta 19679429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 37273239 - 37273135
Alignment:
Q  49 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaa 148  Q
    |||||||||||| ||||||||||||||||||    |||||||||||| || |||  ||||| | |||||||||||||  |||||| ||||||| || |||    
T  37273239 tgagactgtttgggagagcttatggaaacaa----cttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaa 37273144  T
Q  149 acagattat 157  Q
    |||| ||||    
T  37273143 acagtttat 37273135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 227
Target Start/End: Complemental strand, 38462334 - 38462212
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaa 204  Q
    ||||| ||||||||||||||| || ||  |||||||| || ||||||| ||||||| || ||||||| ||||| |||||||||||  ||||| | | |||    
T  38462334 gttttcagcttatttccataagctatcttggatagcttatgaaaacagtttatagcatatatgaaaacagtttgactttattttatcttttggtatagaa 38462235  T
Q  205 gtatcttatacataagcacttat 227  Q
     || |||||| |||| |||||||    
T  38462234 atagcttataaataaacacttat 38462212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 189
Target Start/End: Complemental strand, 24785279 - 24785174
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 183  Q
    ||||||||||||||| |||  ||||||||||||||| ||||| ||||| ||||||||| || ||||||  |||||| ||| |  |||| || || |||||    
T  24785279 cttatgacatgttcataagttgtttttagcttatttacataagctctcgaggatagcttatgaaaacacgttatagattatacaaaaacagattgacttt 24785180  T
Q  184 atttta 189  Q
    ||||||    
T  24785179 atttta 24785174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 36646349 - 36646483
Alignment:
Q  51 agactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaac 150  Q
    ||||| |||| |||||||||||||||| |    |||||| ||||| || |||| ||||| | |||||||| |||||||||| ||||||||| || |||||    
T  36646349 agactatttgggagagcttatggaaacca----cttatggcatgtccataagctgttttcatcttatttctataaactctctaggatagcttatgaaaac 36646444  T
Q  151 agattatagcttacatgaaaatagtttcactttatttta 189  Q
    |  ||||| |||| ||||||| | ||  |||||||||||    
T  36646445 aagttataacttatatgaaaacaattatactttatttta 36646483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 84 - 151
Target Start/End: Complemental strand, 37825196 - 37825129
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaaca 151  Q
    |||||||||||| || |||  ||||| || |||||||||||| |||||||||| ||||||||||||||    
T  37825196 cttatgacatgtccataagttgttttcaggttatttccataagctctccaggaaagctaataaaaaca 37825129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 171
Target Start/End: Original strand, 3044249 - 3044342
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaa 171  Q
    ||||| ||||||||||||||| |||| ||||| | ||||||| ||||| ||||||||| ||||  |  ||||||| |||||| ||| |||||||    
T  3044249 aaacaacttatgacatgttcataagctgttttcaacttattttcataagctctccaggttagcataagaaaacaggttatagattatatgaaaa 3044342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 198
Target Start/End: Original strand, 32554999 - 32555091
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 198  Q
    |||||||||||| |||||||| || ||||||||| || || ||||||  |||||||||| | ||||||| ||| |||||||||||  |||||||    
T  32554999 gtttttagcttacttccataatct-tccaggataactcatgaaaacaacttatagcttataggaaaataatttgactttattttatcttttgtt 32555091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 36101648 - 36101587
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatag 139  Q
    ||||| ||||||||||||||| |||| ||||| ||||||||| ||||| |||| ||||||||    
T  36101648 aaacagcttatgacatgttcacaagctgttttcagcttattttcataagctcttcaggatag 36101587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 50952413 - 50952352
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatag 139  Q
    ||||| ||||||||||||||| || | ||||| ||||||||||||||| ||||||| |||||    
T  50952413 aaacagcttatgacatgttcataaactgttttaagcttatttccataagctctccaagatag 50952352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 242
Target Start/End: Complemental strand, 1395683 - 1395587
Alignment:
Q  146 aaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcacttatgccttaagcacttaa 242  Q
    ||||||| | |||||||| ||||||||| ||| |||||||||||  ||||||| | ||| || |||||||||| |||||| |||  ||||| |||||    
T  1395683 aaaacagttcatagcttatatgaaaataatttgactttattttatcttttgttatagaaatagcttatacatatgcacttttgctataagcgcttaa 1395587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 20669244 - 20669172
Alignment:
Q  86 tatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattata 158  Q
    ||||||||||||| |||| |||||  |||||||| ||||| ||||||| ||||||| || ||||||| |||||    
T  20669244 tatgacatgttcataagctgttttccgcttatttacataagctctccaagatagcttatgaaaacagcttata 20669172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 23785308 - 23785224
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||| ||||| ||||||||| ||||||| || ||||  | ||||||| |||||||||| ||||| | ||||| |||||||||||    
T  23785308 gttttcagcttgtttccataagctctccatgagagcttgtgaaaacagtttatagcttatatgaatacagtttgactttatttta 23785224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 24158528 - 24158641
Alignment:
Q  113 cttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta-aattttgttttggaagtatctt 211  Q
    ||||||||||||| ||||||||||||||| || ||||||| ||||  |||| ||  ||| |||||||||||| ||||    |||||| | ||| || |||    
T  24158528 cttatttccataagctctccaggatagcttatgaaaacagcttattacttatat--aaacagtttcactttactttattcatttgttatagaaataactt 24158625  T
Q  212 atacataagcacttat 227  Q
    ||||||||||||||||    
T  24158626 atacataagcacttat 24158641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 48048981 - 48049045
Alignment:
Q  87 atgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaaca 151  Q
    ||||||||| || |||| ||||| ||||||||||||||| ||| ||| |||||||||| ||||||    
T  48048981 atgacatgtccataagctgttttcagcttatttccataacctccccaagatagctaatgaaaaca 48049045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 32069201 - 32069119
Alignment:
Q  106 tttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    |||||||||||||| ||||| ||||||| ||||||| || ||||||| | |||||||  |||||| || ||| |||||||||||    
T  32069201 tttttagcttattttcataatctctccaagatagcttattaaaacagttgatagcttttatgaaatta-tttgactttatttta 32069119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 163
Target Start/End: Original strand, 33725870 - 33725949
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 163  Q
    ||||||||||||| | | || ||||| | |||||||| |||| || |||||||||| | |||||||||| ||||||||||    
T  33725870 cttatgacatgttgatatgctgttttcatcttatttctataagctttccaggatagtttataaaaacagtttatagctta 33725949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 1217790 - 1217900
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| |||||||||||| || |||  ||||| | |||| || |||||  |||| ||||||||| || ||||||| ||||| |||||||||||| | |||    
T  1217790 aaacagcttatgacatgtccataagttgttttcatcttactttcataagttctcaaggatagcttatgaaaacagcttataacttacatgaaaacaattt 1217889  T
Q  178 cactttatttt 188  Q
     |||| |||||    
T  1217890 aacttcatttt 1217900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 44 - 187
Target Start/End: Complemental strand, 41452633 - 41452494
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 143  Q
    |||| ||||| | ||||||||| ||||| |||||||    ||||||| ||||  | |||| ||||| | |||||||||| ||  |||||||||||||| |    
T  41452633 acttgtgagagtatttgagagaccttatagaaacaa----cttatgatatgtctataagctgttttcaccttatttccacaacttctccaggatagctta 41452538  T
Q  144 taaaaacagattatagcttacatgaaaatagtttcactttattt 187  Q
    | ||||||| ||| | || | ||||||| ||||| |||||||||    
T  41452537 tgaaaacagcttacaactaatatgaaaacagtttgactttattt 41452494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 189
Target Start/End: Complemental strand, 1816657 - 1816552
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 183  Q
    |||||||||| |||| | || ||||| |||||||||  |||| |||||||| |||||| || ||||||  ||||| |||| |  |||| ||||| |||||    
T  1816657 cttatgacattttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaacaacttatatcttatacaaaaacagtttgacttt 1816558  T
Q  184 atttta 189  Q
    ||||||    
T  1816557 atttta 1816552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 196
Target Start/End: Complemental strand, 2719515 - 2719431
Alignment:
Q  111 agcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttg 196  Q
    ||||||||| |||||  |||||| ||||||| || ||||||| |||||||||| |  |||| | ||||||||||||||| ||||||    
T  2719515 agcttattttcataagttctccaagatagcttatgaaaacagtttatagcttaaac-aaaacaatttcactttattttatattttg 2719431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 24625378 - 24625419
Alignment:
Q  209 cttatacataagcacttatgccttaagcacttaattaagttg 250  Q
    |||||||||||||||||||||  ||||| |||||||||||||    
T  24625378 cttatacataagcacttatgctataagcgcttaattaagttg 24625419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 189
Target Start/End: Original strand, 25453863 - 25453960
Alignment:
Q  92 atgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||||| ||||  |||| ||||||||| ||||| || |||||||||| | || |||| || |||||| ||| | ||||| ||||| |||||||||||    
T  25453863 atgttcacaagctcttttcagcttattttcataagctttccaggatagtttatgaaaataggttataggttatacgaaaacagtttgactttatttta 25453960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 30923888 - 30923949
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatag 139  Q
    ||||| ||||||||||||  | |||| ||||| |||||||||| |||||||||| |||||||    
T  30923888 aaacagcttatgacatgtctataagctgttttcagcttatttctataaactctctaggatag 30923949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 36139958 - 36139897
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatag 139  Q
    ||||| ||||||||||||||| |||| ||||| ||||||||| ||||| |||| || |||||    
T  36139958 aaacagcttatgacatgttcacaagctgttttcagcttattttcataagctcttcaagatag 36139897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 53457370 - 53457309
Alignment:
Q  165 atgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcactta 226  Q
    ||||||||||||| |||||||||||  ||||||| | |||||| ||||||| ||| ||||||    
T  53457370 atgaaaatagtttgactttattttatcttttgttatcgaagtagcttatacgtaaacactta 53457309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 2923530 - 2923466
Alignment:
Q  106 tttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaa 170  Q
    ||||||||||||||  |||| |||| |||  ||||| || ||||||| |||||||||||||||||    
T  2923530 tttttagcttatttatataatctcttcagtgtagcttatgaaaacagcttatagcttacatgaaa 2923466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 25925816 - 25925764
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccagga 136  Q
    ||||||||||||||| |||| ||||| | ||||||| ||||| ||||||||||    
T  25925816 cttatgacatgttcataagctgttttcaacttattttcataagctctccagga 25925764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 36200176 - 36200108
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataa 146  Q
    ||||| |||||||||||| || |||  ||||| ||||||||||||| | |||| |||||||||| ||||    
T  36200176 aaacaacttatgacatgtccataagttgttttcagcttatttccatgagctctacaggatagcttataa 36200108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 45432936 - 45432988
Alignment:
Q  85 ttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggat 137  Q
    |||||||||||||| |||  ||||| ||||||||||||||| |||| ||||||    
T  45432936 ttatgacatgttcataagttgttttcagcttatttccataagctctacaggat 45432988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 48528630 - 48528562
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 152  Q
    |||||| ||||| || || | ||||| |||||||||| ||||||||||||| |||||| || |||||||    
T  48528630 cttatggcatgtccataaacagttttcagcttatttctataaactctccagaatagcttatgaaaacag 48528562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 3e-22; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 49 - 227
Target Start/End: Complemental strand, 52286784 - 52286609
Alignment:
Q  49 tgagactgtttgagagagctt-atggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaa 147  Q
    ||||||||||||||||||||| | |||||||    |||| ||| |||| || ||||  ||||||||||||||||||||||||| || |||  || || ||    
T  52286784 tgagactgtttgagagagctttacggaaaca----tcttctgatatgtccataagctatttttagcttatttccataaactcttcaagatgacttatgaa 52286689  T
Q  148 aacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcacttat 227  Q
    || || |||||||||| |||||||| |||| |||||||||||  ||||||| | ||| |||||||| ||||||| |||||    
T  52286688 aatagtttatagcttatatgaaaattgtttaactttattttatcttttgttgtagaaatatcttattcataagcgcttat 52286609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 17269324 - 17269181
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 183  Q
    |||||||||||||||  ||  ||||||| |||||| || ||| ||||||||||||||| || ||||||  |||| ||||| ||||||| | ||| |||||    
T  17269324 cttatgacatgttcatgagttgtttttaacttattaccgtaagctctccaggatagcttatgaaaacaacttattgcttatatgaaaacaatttgacttt 17269225  T
Q  184 attttaaattttgttttggaagtatcttatacataagcacttat 227  Q
    ||||| | ||||||| | ||| || |||||||||||||||||||    
T  17269224 attttcacttttgttctagaaataacttatacataagcacttat 17269181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 51 - 226
Target Start/End: Complemental strand, 15579585 - 15579415
Alignment:
Q  51 agactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaac 150  Q
    |||||||||| |||||||| |||||||||    |||||||||||| || |||  ||| | |||||||||||||||||||  || ||||||| |  | |||    
T  15579585 agactgtttgggagagcttgtggaaacaa----cttatgacatgtccataagttgttctcagcttatttccataaactcaacatgatagcttacgagaac 15579490  T
Q  151 agattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcactta 226  Q
    || |||||||||||||||||| | ||| | ||||||| || ||| ||| | ||| || ||||||||||||||||||    
T  15579489 agcttatagcttacatgaaaacaatttga-tttatttgaactttagttatagaaatagcttatacataagcactta 15579415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 84 - 189
Target Start/End: Original strand, 12477283 - 12477388
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 183  Q
    |||||||||||| || |||  ||||| |||||||||||||| |||||||| ||||||| || |||| ||  |||| |||||||||||| ||||| |||||    
T  12477283 cttatgacatgtccataagttgttttcagcttatttccatacactctccatgatagcttattaaaaaagcatatatcttacatgaaaacagtttgacttt 12477382  T
Q  184 atttta 189  Q
    ||||||    
T  12477383 atttta 12477388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 79 - 177
Target Start/End: Complemental strand, 4622172 - 4622074
Alignment:
Q  79 aacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||||||||||||||| || |||| ||||||||||||||| || || ||||||| ||||||  ||  |||||| |||||||||| ||||||| |||||    
T  4622172 aacatcttatgacatgtccataagctgtttttagcttattttcacaagctctccaagatagcatatggaaacagcttatagcttatatgaaaagagttt 4622074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 30257756 - 30257652
Alignment:
Q  85 ttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttta 184  Q
    |||||||||||||| |||| ||||| |||||||||| |||| | ||||||||||| | || ||||||  ||| |||||| ||| ||| ||||| ||||||    
T  30257756 ttatgacatgttcataagctgttttcagcttatttctataagccctccaggatagtttatgaaaacaacttaaagcttatatggaaacagtttgacttta 30257657  T
Q  185 tttta 189  Q
    |||||    
T  30257656 tttta 30257652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 189
Target Start/End: Complemental strand, 10439791 - 10439655
Alignment:
Q  49 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaa 148  Q
    ||||||| |||| ||||||||||| ||||||||    |||||||||| || || | | ||| ||||||||||||||||||||||||||||| |  | ||     
T  10439791 tgagactatttgggagagcttatgaaaacaaac----tatgacatgtccataatctgctttcagcttatttccataaactctccaggatagtttttgaat 10439696  T
Q  149 acagattatagcttacatgaaaatagtttcactttatttta 189  Q
    | || | |||||||| ||||||||| ||| |||| ||||||    
T  10439695 atagctgatagcttatatgaaaataatttgacttcatttta 10439655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 35925770 - 35925707
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagct 141  Q
    ||||| ||||||||||||||| |||| ||||| | ||||||||||||||||||||| |||||||    
T  35925770 aaacagcttatgacatgttcataagctgttttcaacttatttccataaactctccatgatagct 35925707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 198
Target Start/End: Original strand, 27738200 - 27738290
Alignment:
Q  108 tttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 198  Q
    |||||||||| ||||||| |||||| | |||||| || |||||| ||||||||||| ||||||| | ||| |||||||||||  |||||||    
T  27738200 tttagcttatatccataagctctcctgtatagcttatgaaaacaaattatagcttatatgaaaacaatttgactttattttatcttttgtt 27738290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 44422746 - 44422680
Alignment:
Q  111 agcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||||||| ||||| ||||||||||||||| ||||||| || |||||||||| ||||||| |||||    
T  44422746 agcttattttcataagctctccaggatagcttataaaaatagcttatagcttatatgaaaacagttt 44422680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 4699605 - 4699666
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatag 139  Q
    ||||| ||||||||||||||| |||| |||||||||||||||| |||| |||||| ||||||    
T  4699605 aaacaacttatgacatgttcataagctgtttttagcttatttctataagctctccgggatag 4699666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 189
Target Start/End: Original strand, 7218070 - 7218175
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 183  Q
    ||||||||| ||||| |||| ||||| | ||||||| |||||  |||||||||||| | || ||||||  |||||||||| ||||||| | ||| |||||    
T  7218070 cttatgacacgttcacaagctgttttcaacttattttcataagttctccaggataggttatgaaaacaacttatagcttatatgaaaacaatttgacttt 7218169  T
Q  184 atttta 189  Q
    ||||||    
T  7218170 atttta 7218175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 44 - 198
Target Start/End: Original strand, 31517700 - 31517850
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 143  Q
    |||| |||||||||||| |||| |||||  ||||||    || |||||||||||| |||| ||||| ||||||||| ||||| ||||||| || || | |    
T  31517700 acttgtgagactgtttgggagaacttatcaaaacaa----ctcatgacatgttcataagctgttttcagcttattttcataagctctccaagacagatta 31517795  T
Q  144 taaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 198  Q
    | || |||| |||||||||| ||||||  | ||| |||||||||||  |||||||    
T  31517796 tgaagacagcttatagcttatatgaaatcaatttaactttattttatcttttgtt 31517850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 15361766 - 15361682
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||| |||||| |||||||||||||| || ||| || || ||||||| |||||||||| ||||||||| ||| |||||| ||||    
T  15361766 gttttcagcttaattccataaactctcaagaatatcttatgaaaacagcttatagcttatatgaaaataatttgactttacttta 15361682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 158
Target Start/End: Complemental strand, 27140558 - 27140478
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattata 158  Q
    ||||| |||||||||||| || |||  ||||| ||||||||| ||||| ||||||| ||||||| |||||||||| |||||    
T  27140558 aaacagcttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttataaaaacagcttata 27140478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 28482223 - 28482315
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaa 170  Q
    ||||||||||||| || |||| || |  |||||||||||||| | ||| ||||||| |||| || |||||||||| |||||||||| ||||||    
T  28482223 aaacatcttatgatatattcataaactatttttagcttattttcgtaagctctccaagataacttataaaaacagcttatagcttatatgaaa 28482315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 198
Target Start/End: Original strand, 35080060 - 35080180
Alignment:
Q  79 aacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaat-aaaaacagattatagcttacatgaaaatagttt 177  Q
    |||| ||||||||||||||| |||| ||||| |||||||||| | || ||||||| ||||||| || ||||| || |||  ||||| ||| ||| |||||    
T  35080060 aacaacttatgacatgttcataagctgttttgagcttatttcgacaagctctccatgatagctcatgaaaaaaagcttagcgcttatatggaaacagttt 35080159  T
Q  178 cactttattttaaattttgtt 198  Q
     |||||||||||  |||||||    
T  35080160 gactttattttattttttgtt 35080180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 45205121 - 45205037
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||| ||||||||||||| |||||| || ||||||| || ||||||  || ||||||| ||| ||||||||| |||||||||||    
T  45205121 gttttcagcttatttccatgaactctacatgatagcttatgaaaacaacttctagcttatatggaaatagtttgactttatttta 45205037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 6977035 - 6976952
Alignment:
Q  43 aacttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctc 131  Q
    ||||| |||| ||||||| ||||||| ||||||||||    ||||||||||||||| |||| ||||| | |||||||||||||||||||    
T  6977035 aacttgtgaggctgtttgcgagagctaatggaaacaa----cttatgacatgttcataagctgttttaa-cttatttccataaactctc 6976952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 48830098 - 48830177
Alignment:
Q  110 tagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||||||||| || | ||||  || |||||| || ||||||| |||||||||| ||||||||||||| |||||||||||    
T  48830098 tagcttatttctattagctctttagaatagcttatgaaaacagtttatagcttatatgaaaatagtttgactttatttta 48830177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 4700083 - 4700141
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 163  Q
    ||||| ||||||||| ||||| ||||||||||||| | |||||||||| ||||||||||    
T  4700083 gttttcagcttattttcataagctctccaggatagtttataaaaacagtttatagctta 4700141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 195
Target Start/End: Complemental strand, 5150982 - 5150900
Alignment:
Q  113 cttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaatttt 195  Q
    |||||||| |||| |||| || ||||||| || |||||| |||| | |||| ||||||||||||| ||||||||||| |||||    
T  5150982 cttatttctataagctcttcatgatagcttatgaaaacaaattacaacttaaatgaaaatagtttgactttattttatatttt 5150900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 9656713 - 9656619
Alignment:
Q  95 ttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    |||| |||| ||||| ||||||||| |||||    |||||||||||| || || |||| |||||||||| ||||||||| ||| |||||||||||    
T  9656713 ttcataagctgttttgagcttattttcataattcatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttatttta 9656619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 226
Target Start/End: Complemental strand, 26184828 - 26184683
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| |||||||||||| || |||| ||||| || |||||||||||| ||||||||||||  | || || |||||||||  ||   ||||||||| |||    
T  26184828 aaacagcttatgacatgtccataagctgttttcagattatttccataagctctccaggataatttatgaatacagattatgact---atgaaaataattt 26184732  T
Q  178 cactttattttaaattttgttttggaagtatcttatacataagcactta 226  Q
     |||||||||||  |||| || | ||| ||  ||||||||||| |||||    
T  26184731 gactttattttaccttttcttatagaaatagtttatacataagtactta 26184683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 189
Target Start/End: Original strand, 10199404 - 10199509
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 183  Q
    ||||||||||||||| |||  ||||| ||||||||| ||||| ||||| |  |||||| || |||| || |||| | ||| | ||||||||||| |||||    
T  10199404 cttatgacatgttcataagttgttttcagcttattttcataagctctctaaaatagcttatgaaaaaagcttatcgattatacgaaaatagtttgacttt 10199503  T
Q  184 atttta 189  Q
    ||||||    
T  10199504 atttta 10199509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 14629964 - 14630041
Alignment:
Q  86 tatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 163  Q
    ||||| ||||||| |||  ||||| |||||||||||||||| |||||| ||||||| || |||| || ||||||||||    
T  14629964 tatgatatgttcataagttgttttcagcttatttccataaagtctccaagatagcttatgaaaatagcttatagctta 14630041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 225
Target Start/End: Original strand, 30259511 - 30259624
Alignment:
Q  113 cttatttccataaactctccaggatagcta-ataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatctt 211  Q
    ||||||||||||| ||||||| |||||||  ||  |||||| |||||||||| || |||  ||||| ||||||||||| |||||||| | ||| || |||    
T  30259511 cttatttccataagctctccatgatagctttatgcaaacagcttatagcttatatcaaagcagtttgactttattttatattttgttatagaaatagctt 30259610  T
Q  212 atacataagcactt 225  Q
     | |||||||||||    
T  30259611 gtgcataagcactt 30259624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 198
Target Start/End: Original strand, 34179889 - 34179982
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 198  Q
    ||||| ||| |||||||||||||| | |||||||| | || ||||||| |||||||||| || |||| | ||| |||||||||||  |||||||    
T  34179889 gttttcagcgtatttccataaacttttcaggatagtttatgaaaacagtttatagcttagattaaaacaatttgactttattttatcttttgtt 34179982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 229
Target Start/End: Original strand, 45999284 - 45999429
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 183  Q
    ||||||||||||||| || | ||||| ||||||| ||| ||| ||||  | ||||||| |  ||||  | |||||||||| ||||||  ||||| |||||    
T  45999284 cttatgacatgttcataaactgttttcagcttatgtccgtaatctctaaatgatagcttacgaaaattggttatagcttatatgaaagcagtttgacttt 45999383  T
Q  184 attttaaattttgttttggaagtatcttatacataagcacttatgc 229  Q
    || |||  ||||||| | ||| || ||||||||| |||||||||||    
T  45999384 atcttatcttttgttatagaaatagcttatacatgagcacttatgc 45999429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 16322902 - 16322818
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||||||||||||||||||| |||| ||  |||||  || ||||||| ||||| |||  ||||||||||||| ||| |||||||    
T  16322902 gtttttagcttatttccataagctcttcaaaatagcctatgaaaacagcttataacttctatgaaaatagtttgactatatttta 16322818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 151
Target Start/End: Complemental strand, 3924670 - 3924631
Alignment:
Q  112 gcttatttccataaactctccaggatagctaataaaaaca 151  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  3924670 gcttatttccataaactcttcaggatagcttataaaaaca 3924631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 133
Target Start/End: Complemental strand, 6292573 - 6292518
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctcca 133  Q
    ||||| ||||||||||||||| |||| ||||| ||||||||| ||||| |||||||    
T  6292573 aaacagcttatgacatgttcataagctgttttcagcttattttcataagctctcca 6292518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 7262508 - 7262627
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| ||| ||||||||||| |||| ||||| | |||||||||| || |||| |||||||||| || |||| |  |||||  | | ||||||| |||||    
T  7262508 aaacagcttttgacatgttcataagctgttttcaccttatttccacaagctcttcaggatagcttatgaaaagaacttatacttaaaatgaaaacagttt 7262607  T
Q  178 cactttattttaaattttgt 197  Q
     |||||||| || |||||||    
T  7262608 aactttattatacattttgt 7262627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 140
Target Start/End: Original strand, 24146297 - 24146332
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagc 140  Q
    ||||||||||||||||||||||||||| ||||||||    
T  24146297 gtttttagcttatttccataaactctcaaggatagc 24146332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 4482031 - 4481969
Alignment:
Q  53 actgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttattt 119  Q
    ||||||||||||| |||||| ||||||    ||||| ||||||||| |||| |||||||||||||||    
T  4482031 actgtttgagagaacttatgaaaacaa----cttattacatgttcataagctgtttttagcttattt 4481969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 198
Target Start/End: Complemental strand, 11211171 - 11211078
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 198  Q
    ||||||| |||||||||||||||||||||  | |||| || |||| || || || |||| ||||||| | ||| |||||||||||  |||||||    
T  11211171 gtttttaacttatttccataaactctccataacagcttatgaaaatagtttttatcttatatgaaaaaaatttaactttattttatcttttgtt 11211078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 11639406 - 11639459
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctc 131  Q
    ||||| |||||||||||| || |||| ||||||||||||||| ||||| |||||    
T  11639406 aaacagcttatgacatgtccataagctgtttttagcttattttcataagctctc 11639459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 15438059 - 15437981
Alignment:
Q  58 ttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagc 140  Q
    ||||||||| ||||||||||||    ||||||||||||||| |||    ||| ||||||||||| ||||||||| ||||||||    
T  15438059 ttgagagaggttatggaaacaa----cttatgacatgttcataagttactttcagcttatttccgtaaactctcgaggatagc 15437981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 17009550 - 17009591
Alignment:
Q  52 gactgtttgagagagcttatggaaacaaacatcttatgacat 93  Q
    ||||||||| ||||||||||||||||||||| |||| |||||    
T  17009550 gactgtttgggagagcttatggaaacaaacaacttaggacat 17009591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 187
Target Start/End: Complemental strand, 26630507 - 26630434
Alignment:
Q  114 ttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattt 187  Q
    |||||||||||   |||||||||||||  || ||||||| |||||||||| ||||||| | ||| |||||||||    
T  26630507 ttatttccatatgttctccaggatagcgtatcaaaacagtttatagcttatatgaaaacaattttactttattt 26630434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 163
Target Start/End: Original strand, 37842345 - 37842430
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 163  Q
    |||||||| |||||||||||| |||| ||||| |||||||||  ||||  ||| || ||||||| || ||||||  ||||||||||    
T  37842345 aaacatctaatgacatgttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagctta 37842430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 3887621 - 3887765
Alignment:
Q  78 aaacatcttatgacat-gttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtt 176  Q
    |||||||||||||||| ||||| |||| ||||||| ||||||| |||||  |||||  | |||||  ||||| ||| ||||||||   | |||| || ||    
T  3887621 aaacatcttatgacattgttcataagctgtttttaacttattttcataagttctcctagctagcttgtaaaatcagcttatagctcgtaagaaattaatt 3887720  T
Q  177 tcactttattttaaattttgttttggaagtatcttatacataagc 221  Q
    | |||||||||||  ||||| | | ||| || |||||||||||||    
T  3887721 taactttattttatcttttgctattgaaatagcttatacataagc 3887765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 6976941 - 6976885
Alignment:
Q  165 atgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagc 221  Q
    ||||||||||||| ||||||| |||  ||||||| | ||| ||||||||||||||||    
T  6976941 atgaaaatagtttaactttatcttatcttttgttatagaaatatcttatacataagc 6976885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 15566661 - 15566737
Alignment:
Q  113 cttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||| |||||||||| |||| ||||||| || |||| |||||||| |||| | || || ||||| |||||||||||    
T  15566661 cttatatccataaactttccatgatagcttatgaaaatagattataacttaaaggagaacagtttgactttatttta 15566737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 15581364 - 15581223
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 143  Q
    |||| ||||| ||||||  |||||| ||||||||||    ||||||||||||  | |||| ||||| ||| |||||| |||| | ||| || ||| || |    
T  15581364 acttgtgagattgtttggaagagctaatggaaacaa----cttatgacatgtctataagctgttttcagcctatttctataagccctctagcatacctta 15581269  T
Q  144 taaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    |||||| || |||||||||| || ||||||  || |||||||||||    
T  15581268 taaaaaaagcttatagcttatataaaaatatattaactttatttta 15581223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 17628689 - 17628568
Alignment:
Q  64 gagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 163  Q
    ||||||||||||||||    |||||||||||| || |||| ||||| ||| |||||||| ||   |||||  |||| |||||||||||| |||||  |||    
T  17628689 gagcttatggaaacaa----cttatgacatgtccataagctgttttcagcatatttccaaaagacctccaaaatagttaataaaaacagcttataattta 17628594  T
Q  164 catgaaaatagtttcactttatttta 189  Q
     ||||||| | ||| |||||| ||||    
T  17628593 tatgaaaacaatttgactttacttta 17628568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 25479654 - 25479570
Alignment:
Q  85 ttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaa 169  Q
    ||||||||||||||  ||  ||||| ||||||||| ||||| ||||| ||||||||| || ||||||  ||||||| || |||||    
T  25479654 ttatgacatgttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaaacaacttatagcctatatgaa 25479570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 27887114 - 27887218
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 183  Q
    |||||||||||| || ||   |||||||||||||||  |||  ||||||| ||||| | || ||||||  |||||||||| ||| |||| |||| |||||    
T  27887114 cttatgacatgtccataaattgtttttagcttatttttatatgctctccatgatagtttatgaaaacaacttatagcttatatggaaattgtttgacttt 27887213  T
Q  184 atttt 188  Q
    |||||    
T  27887214 atttt 27887218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 171
Target Start/End: Original strand, 28689442 - 28689537
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaata--aaaacagattatagcttacatgaaaa 171  Q
    ||||| |||||||||||| || |||  ||||| ||||||||| ||||| || |||| ||||||| |||  ||||||  |||||||||| |||||||    
T  28689442 aaacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaacttatagcttatatgaaaa 28689537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 28935873 - 28935929
Alignment:
Q  85 ttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagct 141  Q
    ||||||||||| || |||   |||||||||||||||||||| |||| ||||||||||    
T  28935873 ttatgacatgtccataagttttttttagcttatttccataagctcttcaggatagct 28935929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 87 - 227
Target Start/End: Original strand, 44031998 - 44032138
Alignment:
Q  87 atgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatt 186  Q
    ||||||||| || ||||  |||| |||| |||||||||| |||| || |||| || |  |||| || |||||||||| ||||||| | ||| ||||||||    
T  44031998 atgacatgtccataagctattttcagctaatttccataagctcttcaagataacttaagaaaatagtttatagcttatatgaaaacaatttgactttatt 44032097  T
Q  187 ttaaattttgttttggaagtatcttatacataagcacttat 227  Q
    |||  ||||||| | |||    ||||||||||| |||||||    
T  44032098 ttagcttttgttatagaaacggcttatacataaacacttat 44032138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 1e-21; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 44 - 226
Target Start/End: Complemental strand, 28165201 - 28165023
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 143  Q
    |||||||||||| ||||||| ||||||||||||||     || | ||| |||||| |||| ||||| | ||||||||||||| ||||||| ||||||| |    
T  28165201 acttatgagactctttgagatagcttatggaaacag----ctcaagacctgttcataagctgttttcaacttatttccataagctctccatgatagctta 28165106  T
Q  144 taaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcactta 226  Q
    |||| |||| |||||||||| || |||| | ||| |||| ||||||  ||||||| | |||  | ||||||||||||||||||    
T  28165105 taaagacagtttatagcttatattaaaacaatttgacttcattttatcttttgttatagaaagaacttatacataagcactta 28165023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 49 - 189
Target Start/End: Original strand, 48157085 - 48157221
Alignment:
Q  49 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaa 148  Q
    |||||||||||| |||||||||| |||||||    |||||| ||||| || |||| ||||| |||||||||||||||  ||||| | ||||||  | |||    
T  48157085 tgagactgtttgggagagcttatagaaacaa----cttatgccatgtccataagctgttttcagcttatttccataagatctcccgaatagcttgtgaaa 48157180  T
Q  149 acagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||| ||||||||||| || |||| | |||||||||||||||    
T  48157181 acaaattatagcttatattaaaacaatttcactttatttta 48157221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 176
Target Start/End: Original strand, 33645918 - 33646049
Alignment:
Q  42 aaacttatgagactgtttg-agagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagc 140  Q
    |||||| |||||||| ||| |||||||||||||||||||    ||||||||||||  | |||  |||||||| |||||||||||| ||||||| ||||||    
T  33645918 aaacttgtgagactggttggagagagcttatggaaacaa----cttatgacatgtctataagttgtttttaggttatttccataagctctcca-gatagc 33646012  T
Q  141 taataaaaacagattatagctt-acatgaaaatagtt 176  Q
    | || ||||||| ||||||||| | ||||||||||||    
T  33646013 ttatgaaaacagtttatagcttaatatgaaaatagtt 33646049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 90 - 200
Target Start/End: Complemental strand, 38010782 - 38010672
Alignment:
Q  90 acatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||||||| |||| |||||||||||||||||||||  |||| ||||||| | || ||||||| |||||||||| ||||||| | |||  |||| |||||    
T  38010782 acatgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgtttta 38010683  T
Q  190 aattttgtttt 200  Q
      |||||||||    
T  38010682 tcttttgtttt 38010672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 36598321 - 36598388
Alignment:
Q  49 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttc 120  Q
    ||||| |||||||||||||||||||||||    ||||||||||||||||| |||| ||||| ||||||||||    
T  36598321 tgagattgtttgagagagcttatggaaac----atcttatgacatgttcataagctgttttcagcttatttc 36598388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 40688993 - 40689087
Alignment:
Q  95 ttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    |||| |||| ||||| ||||||||| |||||  | |||||||||||| || || |||| |||||||||| ||||||||| ||| |||||||||||    
T  40688993 ttcataagctgttttgagcttattttcataagttatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttatttta 40689087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 186
Target Start/End: Original strand, 44151436 - 44151578
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 143  Q
    |||| ||||| | |||||||||||||||| ||||||   | ||||||||||| || |||  ||||| ||||||||||||||| || | || ||||| | |    
T  44151436 acttgtgagattatttgagagagcttatgaaaacaatttttttatgacatgtccataagatgttttcagcttatttccataagcttttcaagatagttta 44151535  T
Q  144 taaaaacagattatagcttacatgaaaatagtttcactttatt 186  Q
    | ||||||  |||||||||| ||| ||| ||||| ||||||||    
T  44151536 tgaaaacaacttatagcttatatggaaacagttttactttatt 44151578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 78 - 227
Target Start/End: Original strand, 3610730 - 3610879
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| || ||||||||| || ||||| |||| |||||||||| |||| ||||| ||||||| | |  ||||||  |||||||||| |  |||| |||||    
T  3610730 aaacagctaatgacatgtccataagcctttttcagcttatttctataagctctctaggatagtttacgaaaacaacttatagcttataccaaaacagttt 3610829  T
Q  178 cactttattttaaattttgttttggaagtatcttatacataagcacttat 227  Q
      ||| ||||||  ||||||| | ||| || |||||||||||||||||||    
T  3610830 gccttcattttatcttttgttgtagaaatagcttatacataagcacttat 3610879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 226
Target Start/End: Original strand, 27378845 - 27378965
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaa 204  Q
    ||||| || |||||| ||||| ||||||||||||| | || |||||||||| ||| ||| ||||||| ||||  |||||||||| | ||||||  | |||    
T  27378845 gttttcagtttattttcataagctctccaggatagtttatgaaaacagattgtagtttatatgaaaacagttctactttatttt-acttttgtaatagaa 27378943  T
Q  205 gtatcttatacataagcactta 226  Q
     || ||||||||||||||||||    
T  27378944 atagcttatacataagcactta 27378965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 17989049 - 17989133
Alignment:
Q  114 ttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 198  Q
    |||||| ||||| |||| ||||| |||| || |||||| ||||||| ||| ||||||| ||||| ||||||||||| ||||||||    
T  17989049 ttattttcataagctcttcaggagagcttatgaaaacaaattatagtttatatgaaaacagtttgactttattttatattttgtt 17989133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 23721553 - 23721469
Alignment:
Q  111 agcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaatttt 195  Q
    ||||||||||||||| | | | ||||||||| |||||||||  |||||| ||| ||||||||||||| |||||||| ||| ||||    
T  23721553 agcttatttccataagcgcacaaggatagcttataaaaacaacttatagtttaaatgaaaatagtttgactttattctaactttt 23721469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 30812195 - 30812143
Alignment:
Q  111 agcttatttccataaactctccaggatagctaataaaaacagattatagctta 163  Q
    ||||||||||||||| ||||||| |||||||||| ||||||| ||||||||||    
T  30812195 agcttatttccataagctctccatgatagctaatgaaaacagcttatagctta 30812143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 78 - 189
Target Start/End: Complemental strand, 12110440 - 12110329
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| ||||||||||||||| || | |||||||| |||||| |||||  ||| || ||||||| || ||||||| |||||||||| |  |||| | |||    
T  12110440 aaacaacttatgacatgttcacaaactgtttttagattattttcataagttcttcaagatagcttatgaaaacagcttatagcttataccaaaacaattt 12110341  T
Q  178 cactttatttta 189  Q
     |||||||||||    
T  12110340 gactttatttta 12110329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 78 - 177
Target Start/End: Complemental strand, 28702829 - 28702731
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| ||||||||||||||| |||| ||||  | ||||||||||| | ||| ||||||||||| || |||||||  |||| |||||||||||| |||||    
T  28702829 aaacaacttatgacatgttcataagcggtttgaa-cttatttccatgagctcgccaggatagcttatgaaaacagtgtataacttacatgaaaacagttt 28702731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 44615094 - 44615180
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttac 164  Q
    ||||| |||||||||||| || |||| ||||| |  |||||||||||||||||| ||| || || || ||||||| |||||||||||    
T  44615094 aaacaacttatgacatgtccacaagctgttttcacgttatttccataaactctcaaggctaacttatgaaaacagtttatagcttac 44615180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 189
Target Start/End: Original strand, 24363601 - 24363702
Alignment:
Q  88 tgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattt 187  Q
    |||||||| || |||  ||||| ||||||||||||||| ||||||||||||||| || ||||||  ||||| | |  |||||||||| || ||| |||||    
T  24363601 tgacatgtccataagttgttttcagcttatttccataacctctccaggatagcttatgaaaacaacttataacctgtatgaaaatagattgactctattt 24363700  T
Q  188 ta 189  Q
    ||    
T  24363701 ta 24363702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 188
Target Start/End: Complemental strand, 47177687 - 47177606
Alignment:
Q  107 ttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttt 188  Q
    ||||||||||||| |||||| |||||| |||||||  | ||||||| |||||||||| ||||||| | ||| ||||| ||||    
T  47177687 ttttagcttattttcataaattctccaagatagcttttgaaaacagcttatagcttatatgaaaacaatttaactttgtttt 47177606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 227
Target Start/End: Complemental strand, 27548310 - 27548194
Alignment:
Q  111 agcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatct 210  Q
    ||||||| |||||||  | |||| ||||||| || ||||||| |||||||||| ||||||| | ||  |||||||||||  ||||| |  |||| || ||    
T  27548310 agcttatctccataagttatccaagatagcttatgaaaacagcttatagcttaaatgaaaacaattagactttattttatcttttgctaaggaaatagct 27548211  T
Q  211 tatacataagcacttat 227  Q
    |||| ||||||||||||    
T  27548210 tatagataagcacttat 27548194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 31002773 - 31002693
Alignment:
Q  146 aaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcactta 226  Q
    ||||||| |||||||||| ||||||||| ||| |||||||||||  ||||||  | ||| ||  |||||||||||||||||    
T  31002773 aaaacagcttatagcttatatgaaaatattttgactttattttatcttttgtggttgaaatagtttatacataagcactta 31002693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 165
Target Start/End: Original strand, 46056027 - 46056087
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttaca 165  Q
    ||||||||||||||||||||| |||| | |||||||| || ||||||  ||||||||||||    
T  46056027 gtttttagcttatttccataagctctacgggatagcttatgaaaacaatttatagcttaca 46056087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 5006540 - 5006619
Alignment:
Q  119 tccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 198  Q
    ||||| ||||||||||| ||||| || ||||||  ||||| |||| ||||||| ||||| |||||||||||  |||||||    
T  5006540 tccatgaactctccagggtagcttatgaaaacaatttataccttatatgaaaacagtttgactttattttatcttttgtt 5006619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 9423591 - 9423658
Alignment:
Q  85 ttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 152  Q
    |||||||||||||| |||  ||||| |||||||||| | || ||||||||||||||| || |||||||    
T  9423591 ttatgacatgttcataagttgttttcagcttatttcaagaagctctccaggatagcttattaaaacag 9423658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 12234879 - 12234950
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaa 149  Q
    ||||| ||||||||||||  | |||| ||||| ||||||||||||||| ||||| |||| |||| |||||||    
T  12234879 aaacaacttatgacatgtctataagctgttttcagcttatttccataagctctctaggaaagctcataaaaa 12234950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 133
Target Start/End: Original strand, 22387861 - 22387941
Alignment:
Q  49 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctcca 133  Q
    |||||||||||| ||||||||||| ||||||    |||||| |||||| | || | ||||||| ||||||||||||| |||||||    
T  22387861 tgagactgtttgggagagcttatgaaaacaa----cttatggcatgtttataaactgtttttaacttatttccataagctctcca 22387941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 189
Target Start/End: Complemental strand, 29363562 - 29363487
Alignment:
Q  114 ttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    |||||||||||| |||||||||||| || || | ||||| ||||| || | ||||||| ||||| |||||||||||    
T  29363562 ttatttccataagctctccaggataacttatgataacagcttataactaatatgaaaacagtttgactttatttta 29363487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 78
Target Start/End: Original strand, 39591457 - 39591492
Alignment:
Q  43 aacttatgagactgtttgagagagcttatggaaaca 78  Q
    ||||||||||| ||||||||||||||||||||||||    
T  39591457 aacttatgagattgtttgagagagcttatggaaaca 39591492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 40439112 - 40439061
Alignment:
Q  100 aagccgtttttagcttatttccataaactctccaggatagctaataaaaaca 151  Q
    |||| ||||||| ||||||||||||| |||| ||||||||||||| ||||||    
T  40439112 aagctgtttttaacttatttccataagctcttcaggatagctaatgaaaaca 40439061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 44 - 227
Target Start/End: Complemental strand, 4966266 - 4966087
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 143  Q
    |||| |||||||||||  |||||||||| ||||| |    ||||||| |||| || |||  ||||| || |||||||||||| |||| |||||| ||| |    
T  4966266 acttgtgagactgtttaggagagcttatagaaacca----cttatgatatgtccataagttgttttcagtttatttccataagctcttcaggatggctta 4966171  T
Q  144 taaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcacttat 227  Q
    | ||||||| ||||| || | |||||||  |||| |  ||||||||   |||||| ||||| || |||||| ||||| ||||||    
T  4966170 tgaaaacagcttatacctaatatgaaaactgtttgatattattttatcctttgttgtggaaataacttatatataagaacttat 4966087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 5369737 - 5369828
Alignment:
Q  134 ggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcacttat 227  Q
    |||||||| || ||||||| ||||||| || ||||||| ||||| ||||||||  || |||| || | ||| || |||||||||||||||||||    
T  5369737 ggatagcttatgaaaacagcttatagcatatatgaaaacagtttgactttatt--aattttttttatagaattagcttatacataagcacttat 5369828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 27517852 - 27517898
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactct 130  Q
    |||||||||||| || |||| ||||| ||||||||||||||||||||    
T  27517852 cttatgacatgtccataagcagttttcagcttatttccataaactct 27517898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 28340427 - 28340497
Alignment:
Q  119 tccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||||| |||||||| ||||||  | ||||||  ||||| |||||||||||| ||||| |||||||||||    
T  28340427 tccataagctctccagcatagcttctgaaaacaacttataacttacatgaaaacagtttgactttatttta 28340497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 36538018 - 36537951
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagctt 115  Q
    |||| ||||| ||||||||||| |||||||||||||    ||||||||||||||| |||  |||||||||||    
T  36538018 acttgtgagattgtttgagagaacttatggaaacaa----cttatgacatgttcataagttgtttttagctt 36537951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 39506008 - 39505963
Alignment:
Q  106 tttttagcttatttccataaactctccaggatagctaataaaaaca 151  Q
    |||| |||||||||||||||||||||||| |||||| || ||||||    
T  39506008 ttttcagcttatttccataaactctccagaatagcttatgaaaaca 39505963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 3968783 - 3968827
Alignment:
Q  114 ttatttccataaactctccaggatagctaataaaaacagattata 158  Q
    |||||||||||||||||||||||||||| || |||| || |||||    
T  3968783 ttatttccataaactctccaggatagcttatgaaaatagcttata 3968827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 227
Target Start/End: Complemental strand, 11208496 - 11208380
Alignment:
Q  111 agcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatct 210  Q
    |||||||||||||||| |  ||| ||||||| || ||||||   ||||| ||| |||||||  |||| | |||||||||  ||||||| | ||| |||||    
T  11208496 agcttatttccataaaatacccaagatagcttatgaaaacaacatatagtttatatgaaaacggtttgagtttattttatcttttgttgtagaattatct 11208397  T
Q  211 tatacataagcacttat 227  Q
    |||| |||||| |||||    
T  11208396 tatatataagcgcttat 11208380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 49 - 81
Target Start/End: Complemental strand, 17944894 - 17944862
Alignment:
Q  49 tgagactgtttgagagagcttatggaaacaaac 81  Q
    |||||||||||||||||| ||||||||||||||    
T  17944894 tgagactgtttgagagagtttatggaaacaaac 17944862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 158
Target Start/End: Original strand, 18749807 - 18749887
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattata 158  Q
    ||||| |||| |||||||||| |||| ||||| |||||||||||||||  | |||  ||||||| || ||||||| |||||    
T  18749807 aaacagcttacgacatgttcataagcagttttcagcttatttccataagttttccgtgatagcttatgaaaacagcttata 18749887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 22759230 - 22759146
Alignment:
Q  114 ttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 198  Q
    |||||||||||| |||||| |||||||| || ||| ||| || ||||||| ||||||| | |||  ||||||||||  |||||||    
T  22759230 ttatttccataagctctcctggatagcttatgaaatcagcttttagcttatatgaaaacaattttcctttattttatcttttgtt 22759146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 46825151 - 46825067
Alignment:
Q  106 tttttagcttatttc-cataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||||||||||||| ||||| | ||||| ||||||| || ||||| | |||| ||||| ||||||| | ||| |||||||||||    
T  46825151 tttttagcttatttctcataagcactccaagatagcttatgaaaacggtttatggcttatatgaaaacaatttgactttatttta 46825067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 1e-21; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 49 - 189
Target Start/End: Complemental strand, 33942257 - 33942119
Alignment:
Q  49 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaa 148  Q
    |||||||||||||||||||||||||| | |  || ||||||||||||||| |||| ||||| |||| |||| ||| | ||||| | ||| ||| || |||    
T  33942257 tgagactgtttgagagagcttatggagaga--caacttatgacatgttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaa 33942160  T
Q  149 acagattatagcttacatgaaaatagtttcactttatttta 189  Q
    |||  |||||||||||||||||| ||||| |||||||||||    
T  33942159 acaacttatagcttacatgaaaacagtttgactttatttta 33942119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 79 - 198
Target Start/End: Original strand, 1939323 - 1939442
Alignment:
Q  79 aacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagct-tacatgaaaatagttt 177  Q
    |||| |||||||||||| || |||| ||||| | ||||||||||||| |||||||| |||||| || ||||||| ||||||||  | |||||||||||||    
T  1939323 aacaacttatgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaacag-ttatagctcaatatgaaaatagttt 1939421  T
Q  178 cactttattttaaattttgtt 198  Q
    ||||||||||||  |||||||    
T  1939422 cactttattttatcttttgtt 1939442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 90 - 200
Target Start/End: Original strand, 22681187 - 22681297
Alignment:
Q  90 acatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||||||| |||| |||||||||||||||||||||  |||| ||||||| | || ||||||| |||||||||| ||||||| | |||  |||| |||||    
T  22681187 acatgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgtttta 22681286  T
Q  190 aattttgtttt 200  Q
      |||||||||    
T  22681287 tcttttgtttt 22681297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 198
Target Start/End: Original strand, 1741996 - 1742142
Alignment:
Q  48 atgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaa 147  Q
    |||||||| |||| ||||||||||||||||||    |||||||||||| || ||||  | || | |||||||||||||||||| || ||||| | || ||    
T  1741996 atgagactatttgggagagcttatggaaacaa----cttatgacatgtgcataagctatcttcaacttatttccataaactcttcatgatagattatgaa 1742091  T
Q  148 aacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 198  Q
    ||||| ||||| |||| ||  ||| ||||| |||| |||||| ||||||||    
T  1742092 aacagcttatatcttatatataaagagtttgacttcattttatattttgtt 1742142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 227
Target Start/End: Original strand, 17952723 - 17952840
Alignment:
Q  111 agcttatttccataaactc-tccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatc 209  Q
    |||||||||||||  |||| |||||||||||| || ||||||  || ||||||| ||||||||||||| |||||||||||  ||||||| | ||| || |    
T  17952723 agcttatttccatgcactcctccaggatagcttatgaaaacatcttgtagcttatatgaaaatagtttgactttattttatcttttgttatagaaatagc 17952822  T
Q  210 ttatacataagcacttat 227  Q
    ||||| |||||| |||||    
T  17952823 ttatatataagctcttat 17952840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 226
Target Start/End: Original strand, 18962035 - 18962176
Alignment:
Q  86 tatgacatgttcaaaagccgtttttagctt-atttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttta 184  Q
    |||||||||||||   || ||||| ||||| |||||||||  ||||||| ||||||| || |||| || |||||||||| ||||||| ||||| ||||||    
T  18962035 tatgacatgttcatgtgctgttttcagctttatttccatagtctctccatgatagcttatgaaaatagtttatagcttatatgaaaacagtttaacttta 18962134  T
Q  185 ttttaaattttgttttggaagtatcttatacataagcactta 226  Q
    |||||  ||||||| |  || || || |||||||||||||||    
T  18962135 ttttatcttttgttataaaaatagctaatacataagcactta 18962176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 189
Target Start/End: Complemental strand, 35485991 - 35485886
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 183  Q
    ||||||| ||||||| |||| ||||| |||| |||||||||  |||| |||||||||| |||||||||  |||||||||| |   ||||||||| |||||    
T  35485991 cttatgatatgttcataagctgttttcagctcatttccataggctcttcaggatagcttataaaaacaacttatagcttataatgaaatagtttgacttt 35485892  T
Q  184 atttta 189  Q
    ||||||    
T  35485891 atttta 35485886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 189
Target Start/End: Original strand, 44458334 - 44458439
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 183  Q
    |||||||||| | || |||  |||||||||||||||  |||||||||||| ||||||| ||| |||||| ||||||  ||||||||||||| || |||||    
T  44458334 cttatgacatatccataagttgtttttagcttatttatataaactctccatgatagcttatacaaacagcttatagtatacatgaaaatagcttgacttt 44458433  T
Q  184 atttta 189  Q
    | ||||    
T  44458434 agttta 44458439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 119 - 227
Target Start/End: Complemental strand, 10143211 - 10143103
Alignment:
Q  119 tccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacata 218  Q
    ||||||||||||||| ||||||| || |||| |  |||||||||| || |||| ||||| |||| ||||||  ||||||| | ||| || ||||||||||    
T  10143211 tccataaactctccatgatagcttatgaaaaaaacttatagcttatataaaaacagtttgacttaattttatcttttgttatagaaataacttatacata 10143112  T
Q  219 agcacttat 227  Q
    |||||||||    
T  10143111 agcacttat 10143103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 10198479 - 10198567
Alignment:
Q  87 atgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagt 175  Q
    |||||||||||| |||| ||| | ||||||||||||||| ||||| ||||||| | ||||||||||  |||| |||| |||||||||||    
T  10198479 atgacatgttcataagctgttgtcagcttatttccataatctctctaggatagattataaaaacagcctatatcttatatgaaaatagt 10198567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 43173295 - 43173191
Alignment:
Q  85 ttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttta 184  Q
    ||||||||||| || | || ||||| | |||||||||||||  |||||| ||||||  ||||||||| | ||||||||| ||||||||| ||| ||||||    
T  43173295 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 43173196  T
Q  185 tttta 189  Q
    |||||    
T  43173195 tttta 43173191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 133
Target Start/End: Original strand, 27237883 - 27237938
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctcca 133  Q
    ||||| |||||||||||| || |||| |||||||||||||||||||||||||||||    
T  27237883 aaacagcttatgacatgtacataagctgtttttagcttatttccataaactctcca 27237938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 43985289 - 43985146
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| |||||||||||| || ||||  |||| | ||| ||||||||| |||| || | ||||| | ||||||| |||||||||||||  | || | |||    
T  43985289 aaacaacttatgacatgtccataagcttttttcaacttgtttccataagctcttcacggtagcttacaaaaacaaattatagcttacactataacaattt 43985190  T
Q  178 cactttattttaaattttgttttggaagtatcttatacataagc 221  Q
     ||||||| |||||||||||| | ||||||  ||||||||||||    
T  43985189 aactttatattaaattttgttatagaagtagtttatacataagc 43985146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 227
Target Start/End: Complemental strand, 9478401 - 9478230
Alignment:
Q  52 gactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaaca 151  Q
    ||||||||||||||| |||||    |||||| ||||| |||||| || |||| ||||| | |||| |||||| ||||||||| ||||||| |  || |||    
T  9478401 gactgtttgagagagtttatg----caaacaacttattacatgtccataagctgttttcatcttacttccatcaactctccacgatagcttacgaacaca 9478306  T
Q  152 gattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcacttat 227  Q
    |  ||||||||| ||||||||| ||| | |||||||||  |  |||| | ||| || ||||||||||| |||||||    
T  9478305 gcatatagcttatatgaaaatattttgagtttattttatctactgttatagaaatagcttatacataaacacttat 9478230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 7103499 - 7103584
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaat-aaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||||||||||||| || |||||||| | ||||||| || |||||||| |||||||||| || |||| ||||| |||||||||||    
T  7103499 gtttttagcttattttcacaaactctctaagatagcttatgaaaaacagcttatagcttatattaaaacagtttgactttatttta 7103584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 37292380 - 37292457
Alignment:
Q  121 cataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 198  Q
    ||||||||||||||||||||| |  ||||||  | |||||||| ||||||||||||| |||||||||||  |||||||    
T  37292380 cataaactctccaggatagcttaagaaaacaactaatagcttatatgaaaatagttttactttattttatcttttgtt 37292457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 190
Target Start/End: Original strand, 6167305 - 6167385
Alignment:
Q  110 tagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaa 190  Q
    ||||||||||||||||  ||||||  |||||| |||||||||| |||||||||| | ||||  | ||||||||||||||||    
T  6167305 tagcttatttccataagttctccaaaatagcttataaaaacagcttatagcttaaacgaaagcaatttcactttattttaa 6167385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 29316765 - 29316876
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| ||||||||||||||| |||   |||| |||||||||||||||  |||||| ||||||| || ||||||| |||||| |||  |||||| | |||    
T  29316765 aaacagcttatgacatgttcataagttcttttcagcttatttccataagttctccaagatagctgatgaaaacagcttatagattatgtgaaaacaattt 29316864  T
Q  178 cactttatttta 189  Q
     || ||||||||    
T  29316865 aaccttatttta 29316876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 15120283 - 15120200
Alignment:
Q  54 ctgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagct 141  Q
    ||||||| ||||||||||||||||||    |||||||||||||||  ||| ||||| |||||||||  |||| ||||||| |||||||    
T  15120283 ctgtttgggagagcttatggaaacaa----cttatgacatgttcattagctgttttaagcttattttgataagctctccatgatagct 15120200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 41817248 - 41817187
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatag 139  Q
    ||||||||||||||||||| | ||   ||||| ||||||||||||||| |||||||||||||    
T  41817248 aaacatcttatgacatgttgataatttgttttcagcttatttccataagctctccaggatag 41817187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 186
Target Start/End: Complemental strand, 43205354 - 43205281
Alignment:
Q  113 cttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatt 186  Q
    ||||||||||||| ||||||  ||||||| || ||||||||||||| |||| ||||||| |||||  |||||||    
T  43205354 cttatttccataagctctccgtgatagcttatgaaaacagattatatcttatatgaaaacagtttggctttatt 43205281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 3067391 - 3067443
Alignment:
Q  100 aagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 152  Q
    |||||||||||||||||||| |||||||||| || ||||||| || |||||||    
T  3067391 aagccgtttttagcttattttcataaactcttcaagatagcttatgaaaacag 3067443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 157
Target Start/End: Original strand, 3078657 - 3078709
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattat 157  Q
    |||||||||||||||||| || ||||||| ||||||| |||||||||| ||||    
T  3078657 gtttttagcttatttccagaagctctccaagatagcttataaaaacagcttat 3078709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 3673830 - 3673738
Alignment:
Q  135 gatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcacttat 227  Q
    |||||||||| |||| |  ||||| |||| ||||||| | ||| ||||||||||| |||||||| | ||| || || ||||||||||||||||    
T  3673830 gatagctaatgaaaaaaacttataacttatatgaaaacaatttaactttattttatattttgttatagaaataactaatacataagcacttat 3673738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 222
Target Start/End: Complemental strand, 5133852 - 5133708
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| ||||||||||| ||| ||||   ||| ||||||||||||||| |||||   |||| ||  | ||||||| ||||| |||| || |||| |||||    
T  5133852 aaacaacttatgacatggtcataagctactttcagcttatttccataagctctcttagataacttttgaaaacagcttatatcttatataaaaacagttt 5133753  T
Q  178 cactttattttaaattttgttttggaagtatcttatacataagca 222  Q
      ||||||||||  ||||||| | ||| || ||||||||||||||    
T  5133752 atctttattttatcttttgttatagaaatagcttatacataagca 5133708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 198
Target Start/End: Complemental strand, 11513950 - 11513858
Alignment:
Q  106 tttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 198  Q
    |||| |||||||||||| ||  |||||| ||||||| || ||||||  |||||||||| ||||||| | ||| |||||||||||  |||||||    
T  11513950 ttttcagcttatttccaaaagttctccatgatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttatcttttgtt 11513858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 224
Target Start/End: Complemental strand, 12215881 - 12215741
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 183  Q
    |||||||||||| || |||| ||||| | | |||| |||||| ||||| ||||| ||| |||||||||| ||||||| || ||| |||  | |  |||||    
T  12215881 cttatgacatgtccataagctgttttcaccatattcccataagctctcaaggatggcttataaaaacagcttatagcatatatggaaacgggtcgacttt 12215782  T
Q  184 attttaaattttgttttggaagtatcttatacataagcact 224  Q
    ||||||  ||||||| | ||| ||  |||||||||||||||    
T  12215781 attttatcttttgttgtagaaatagtttatacataagcact 12215741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 227
Target Start/End: Original strand, 28803537 - 28803645
Alignment:
Q  119 tccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacata 218  Q
    ||||||| ||||||||||||| | |  ||||||  || ||||||| ||||||  ||||| |||||||||||  ||||||| | ||| || |||||| |||    
T  28803537 tccataagctctccaggatagtttaagaaaacaacttgtagcttatatgaaatcagtttgactttattttatcttttgttatcgaaataacttatatata 28803636  T
Q  219 agcacttat 227  Q
    |||||||||    
T  28803637 agcacttat 28803645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 34651996 - 34652089
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagct 141  Q
    |||| |||||| ||| |||| ||||||| |||||||    |||||||||||| || |||| ||||| | ||||||||||||| ||||||| |||||||    
T  34651996 acttgtgagacggttggagaaagcttatagaaacaa----cttatgacatgtccataagctgttttcaacttatttccataagctctccaagatagct 34652089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 41809205 - 41809282
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataa 125  Q
    |||| |||||||| |||  ||||||| |||||||||    ||||||||||||||| |||  |||||||||||||||||||||    
T  41809205 acttgtgagactgattgtaagagcttgtggaaacaa----cttatgacatgttcataagttgtttttagcttatttccataa 41809282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 32821889 - 32821806
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagct 161  Q
    ||||| |||||||||||| || |||| ||||| || ||||||| |||| ||||  ||||||||| || ||||||| ||||||||    
T  32821889 aaacaacttatgacatgtccataagctgttttcagtttatttctataagctctttaggatagcttatgaaaacagtttatagct 32821806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 189
Target Start/End: Complemental strand, 33256820 - 33256709
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| ||||||||||||||| || | ||| | ||||||||| ||||   ||| |||||| ||| || ||||| | |||||| ||| ||||||| |||||    
T  33256820 aaacagcttatgacatgttcataaactgttctcagcttattttcatacggtcttcaggatggcttatgaaaactgcttatagtttatatgaaaacagttt 33256721  T
Q  178 cactttatttta 189  Q
     |||||||||||    
T  33256720 gactttatttta 33256709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 189
Target Start/End: Complemental strand, 43141915 - 43141840
Alignment:
Q  114 ttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||||||||||||||| |||||||||| || ||||||  |||||||||| ||| ||| | ||| |||||| ||||    
T  43141915 ttatttccataaactcttcaggatagcttatgaaaacatcttatagcttatatggaaacaatttgactttacttta 43141840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 44438829 - 44438940
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| ||||||||||||||| || | ||||| |||||||||||| ||  ||||||||||| || || || |||| |||| ||||  |  |||| |||||    
T  44438829 aaacagcttatgacatgttcataacctgttttcagcttatttccacaagatctccaggataacttatgaagacagcttatggcttgtacaaaaacagttt 44438928  T
Q  178 cactttatttta 189  Q
     |||||||||||    
T  44438929 gactttatttta 44438940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 18179230 - 18179324
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaat 172  Q
    |||||||||| ||||||| ||  |||  |||| ||||||||| | |||  |||||||||||||| || ||| ||| |||||||||| ||||||||    
T  18179230 aaacatcttaagacatgtccattagctattttcagcttattttcgtaagttctccaggatagcttatgaaagcagcttatagcttatatgaaaat 18179324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 44439408 - 44439486
Alignment:
Q  136 atagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttata 214  Q
    |||||| |||||||||  |||||||||| |  |||| ||||| ||||||||||| |||||||| ||||| || ||||||    
T  44439408 atagcttataaaaacaatttatagcttatacaaaaacagtttaactttattttatattttgttatggaaataacttata 44439486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 1647316 - 1647263
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctc 131  Q
    ||||| ||||||||||| ||| |||| ||||| ||||||||||||||| |||||    
T  1647316 aaacagcttatgacatgctcataagctgttttcagcttatttccataagctctc 1647263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 189
Target Start/End: Original strand, 6993720 - 6993825
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 183  Q
    |||||| ||||| || ||| | |||||||||||||| ||||| ||||| || |||||| || ||||||   ||||||||| ||||| ||| ||| || ||    
T  6993720 cttatggcatgtccataagtcatttttagcttattttcataagctctcaagcatagcttatgaaaacaacctatagcttatatgaatataatttgacctt 6993819  T
Q  184 atttta 189  Q
    ||||||    
T  6993820 atttta 6993825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 219
Target Start/End: Complemental strand, 25790206 - 25790065
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| ||||| ||||||||  |||| ||||| | ||||||| ||||| ||||||||||||| | ||  |||||  || ||||||| ||||||| |||||    
T  25790206 aaacagcttattacatgttcctaagctgttttgaacttattttcataagctctccaggatagattatccaaacaatttgtagcttatatgaaaacagttt 25790107  T
Q  178 cactttattttaaattttgttttggaagtatcttatacataa 219  Q
     |||| | ||||  |||| || | ||| ||| ||||||||||    
T  25790106 gacttcactttatctttttttatagaaatatattatacataa 25790065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 31228834 - 31228887
Alignment:
Q  85 ttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggata 138  Q
    |||||||||||  | |||| |||||||| |||||||||||||||||||| ||||    
T  31228834 ttatgacatgtatataagctgtttttaggttatttccataaactctccatgata 31228887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 8820282 - 8820334
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactct 130  Q
    ||||| ||| ||||||||||| |||| ||||| ||||||||||||||| ||||    
T  8820282 aaacagcttctgacatgttcacaagctgttttcagcttatttccataagctct 8820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 25609810 - 25609726
Alignment:
Q  144 taaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcacttatg 228  Q
    ||||||||  |||||||||| | |||||||  || |||||||||||  |||| || | ||| || ||||||||||||||||||||    
T  25609810 taaaaacaacttatagcttatacgaaaataaattgactttattttatcttttcttatagaaatagcttatacataagcacttatg 25609726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 28902080 - 28902008
Alignment:
Q  155 tatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcacttat 227  Q
    ||||||||| ||||||| ||||| | |||||||||| || |||| |  || || |||||||||||||||||||    
T  28902080 tatagcttatatgaaaacagtttaattttattttaacttatgttataaaaatagcttatacataagcacttat 28902008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 32848958 - 32848898
Alignment:
Q  108 tttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatga 168  Q
    ||||||||||||||||||| ||||| | |||||| || |||| || |||||||||| ||||    
T  32848958 tttagcttatttccataaattctccggtatagcttatgaaaatagtttatagcttatatga 32848898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 36863650 - 36863726
Alignment:
Q  113 cttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||||| ||||| ||||||| ||||||| || ||||||  ||||| |||| || ||||| |||| |||||||||||    
T  36863650 cttattttcataagctctccaagatagcttatgaaaacaatttataacttatataaaaattgtttgactttatttta 36863726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 42817393 - 42817477
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    |||||||||||| |||||||| |||| ||| |||||| || ||||||| ||||  |||| ||||||| || || |||| ||||||    
T  42817393 gtttttagcttacttccataagctcttcagaatagcttatgaaaacagtttattacttatatgaaaacagcttgacttcatttta 42817477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 43259892 - 43259840
Alignment:
Q  100 aagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 152  Q
    |||| ||||||||||||||||||||| |||| || |||| ||||| |||||||    
T  43259892 aagctgtttttagcttatttccataagctcttcaagatacctaatgaaaacag 43259840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 44238053 - 44238109
Alignment:
Q  107 ttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 163  Q
    ||||||||||||||||||||||||||| |||| ||  | ||||||  ||||||||||    
T  44238053 ttttagcttatttccataaactctccatgataacttctgaaaacaacttatagctta 44238109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 7e-20; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 105 - 227
Target Start/End: Original strand, 28769356 - 28769478
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaa 204  Q
    ||||| |||||||||||||||||||||||  |||||| || ||||||| |||||||||| | ||||||||||| |||| |||||| | |||||| | | |    
T  28769356 gttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagcttataagaaaatagtttgacttaattttatagtttgttatagga 28769455  T
Q  205 gtatcttatacataagcacttat 227  Q
     || |||||||||||||| ||||    
T  28769456 atagcttatacataagcatttat 28769478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 78 - 226
Target Start/End: Complemental strand, 29973162 - 29973013
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgttttt-agcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtt 176  Q
    ||||| |||| ||||||| ||||||| | |||| || |||||||||||||||||| ||||||||| || ||||||  ||||||||||  |||||||||||    
T  29973162 aaacaacttacgacatgtccaaaagctggttttcagtttatttccataaactctcaaggatagcttatgaaaacaacttatagcttatgtgaaaatagtt 29973063  T
Q  177 tcactttattttaaattttgttttggaagtatcttatacataagcactta 226  Q
    | |||||||||||  || ||||   ||| || |||||| |||||||||||    
T  29973062 tgactttattttaccttgtgttaaagaaatagcttatatataagcactta 29973013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 78 - 227
Target Start/End: Original strand, 39551199 - 39551348
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| |||||||||||| ||||||| ||||||| |||||||  |||| |||||||||| |||| || ||||||  |||||||||  ||||| | |||||    
T  39551199 aaacaacttatgacatgtccaaaagctgtttttaacttatttttataagctctccaggaaagcttatgaaaacaacttatagcttgtatgaagacagttt 39551298  T
Q  178 cactttattttaaattttgttttggaagtatcttatacataagcacttat 227  Q
      ||||||||||  |||| || ||||||||  |||||||||| |||||||    
T  39551299 agctttattttatcttttattatggaagtaggttatacataaacacttat 39551348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 105 - 226
Target Start/End: Complemental strand, 4558851 - 4558730
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaa 204  Q
    |||||||| |||||||||||| ||||| ||||||||| ||  |||||| ||||||| || ||||||||| ||| |||||||||||  |||| || | |||    
T  4558851 gtttttagtttatttccataagctctctaggatagcttatggaaacagcttatagcatatatgaaaataatttaactttattttatcttttattatagaa 4558752  T
Q  205 gtatcttatacataagcactta 226  Q
     || ||||||||||| ||||||    
T  4558751 atagcttatacataaacactta 4558730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 30191108 - 30191242
Alignment:
Q  51 agactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaac 150  Q
    |||||||||| ||||||||||||||||||    ||||||||||||||||||   ||||| |||||||||||||||||  | |||||||||| || ||||     
T  30191108 agactgtttgggagagcttatggaaacaa----cttatgacatgttcaaaacttgttttcagcttatttccataaacatttcaggatagcttatcaaaat 30191203  T
Q  151 agattatagcttacatgaaaatagtttcactttatttta 189  Q
    || |||||| ||| |||  |  ||||| |||||||||||    
T  30191204 agcttatagattatatgtgagcagtttgactttatttta 30191242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 20672824 - 20672756
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 152  Q
    ||||||||||||||| |||| ||||| ||||||||| ||||| ||||||||||||||| ||||||||||    
T  20672824 cttatgacatgttcataagctgttttcagcttattttcataagctctccaggatagcttataaaaacag 20672756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 42215296 - 42215407
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| |||||||| |||||| |||| ||||| ||||||||| ||||| ||||||||||||||  || |||| || |||||| ||| |  |||| |||||    
T  42215296 aaacagcttatgacttgttcataagctgttttcagcttatttacataagctctccaggatagcatatgaaaataggttatagattatacaaaaacagttt 42215395  T
Q  178 cactttatttta 189  Q
     |||||||||||    
T  42215396 gactttatttta 42215407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 31705143 - 31705073
Alignment:
Q  100 aagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaa 170  Q
    |||| ||||| ||||||||||||||||||||| |||| |||| || ||||||| |||||||||| ||||||    
T  31705143 aagctgttttcagcttatttccataaactctcaaggacagcttatgaaaacagcttatagcttatatgaaa 31705073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 227
Target Start/End: Original strand, 38036129 - 38036251
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaa 204  Q
    ||||| |||||||||| |||| ||||||| |||||||||| ||||||| ||||||||||||  |||| | ||| | |||||||||  |||||||    ||    
T  38036129 gttttcagcttatttcaataagctctccaagatagctaatcaaaacagtttatagcttacacaaaaacaatttgaatttattttattttttgttaaataa 38036228  T
Q  205 gtatcttatacataagcacttat 227  Q
     ||  ||||||||||||||||||    
T  38036229 atagtttatacataagcacttat 38036251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 44 - 158
Target Start/End: Original strand, 11569417 - 11569527
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 143  Q
    |||| ||||||||||| ||||||||||||||||||     |||||||||||| || |||  ||||| ||||||||| || || ||||||| ||||||| |    
T  11569417 acttgtgagactgtttaagagagcttatggaaacag----cttatgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagctta 11569512  T
Q  144 taaaaacagattata 158  Q
    | ||||||| |||||    
T  11569513 tgaaaacagcttata 11569527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 198
Target Start/End: Original strand, 42370378 - 42370471
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 198  Q
    ||||| |||||||||||||||||||| || ||||||| || | ||||| |||||||| | |  |||||||||| |||||| |||| ||||||||    
T  42370378 gttttcagcttatttccataaactcttcatgatagcttatgagaacagtttatagctcataaaaaaatagtttgactttactttatattttgtt 42370471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 10075551 - 10075647
Alignment:
Q  88 tgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttta 184  Q
    ||||||||| | |||| | ||||||||||||| ||||| ||||| ||||||||| || |||| || ||||| |||| || |||||||||| ||||||    
T  10075551 tgacatgttgacaagctgcttttagcttattttcataagctctctaggatagcttatgaaaatagcttataacttatataaaaatagtttgacttta 10075647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 41606893 - 41606953
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggata 138  Q
    ||||| |||||||||||||||||||  ||||| ||||||||||||||| ||||| ||||||    
T  41606893 aaacagcttatgacatgttcaaaagttgttttcagcttatttccataagctctctaggata 41606953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 2093331 - 2093248
Alignment:
Q  106 tttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||||||||||||| |||||| || ||||||||||||| ||||||  |||||||||| | |||||   ||| |||||||||||    
T  2093331 tttttagcttatttctataaacgcttcaggatagctaatgaaaacaacttatagcttaaaagaaaaccatttgactttatttta 2093248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 189
Target Start/End: Original strand, 6864477 - 6864560
Alignment:
Q  106 tttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    |||| |||||||||||  || |||||||  |||||| || ||||||  ||||| |||||||||||||||||| |||||||||||    
T  6864477 ttttcagcttatttcctcaagctctccaaaatagcttatgaaaacaacttataacttacatgaaaatagtttgactttatttta 6864560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 84 - 247
Target Start/End: Complemental strand, 11795166 - 11795003
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 183  Q
    |||||||||||| || || | ||||| ||||||||||||||| |||||||  |||||| || ||| ||| ||||| |||| ||||||| ||| | |||||    
T  11795166 cttatgacatgtccataacctgttttcagcttatttccataagctctccataatagcttatgaaatcagcttataacttatatgaaaacagtgtgacttt 11795067  T
Q  184 attttaaattttgttttggaagtatcttatacataagcacttatgccttaagcacttaattaag 247  Q
    ||| ||  ||||||  | |||  | |||||||||||||| | |||| ||||   ||||||||||    
T  11795066 attgtatgttttgtcatagaaaaagcttatacataagcattaatgctttaactgcttaattaag 11795003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 29262864 - 29262975
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| ||||||||||||||| ||||  |||| |  | |||||| ||||||||| ||||| || ||| ||| ||| ||| |||||| ||||||||| |||    
T  29262864 aaacaacttatgacatgttcataagctattttcaagtaatttccgtaaactctctaggattgcaaatgaaatcagcttacagcttatatgaaaataattt 29262963  T
Q  178 cactttatttta 189  Q
     |||||||||||    
T  29262964 gactttatttta 29262975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 34770931 - 34770824
Alignment:
Q  119 tccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacata 218  Q
    ||||| ||||||| ||||||||| || ||||||  |||||||||| ||||||| | ||| |||||||||||  ||||||  ||||| ||  || ||||||    
T  34770931 tccatgaactctctaggatagcttatgaaaacaacttatagcttaaatgaaaacaatttgactttattttatcttttgtaatggaaatagtttttacata 34770832  T
Q  219 agcactta 226  Q
    ||||||||    
T  34770831 agcactta 34770824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 44865589 - 44865648
Alignment:
Q  113 cttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaat 172  Q
    ||||||||||||||||||| || |||||| |||||| ||| |||||||||| ||||||||    
T  44865589 cttatttccataaactctctagtatagcttataaaaccagcttatagcttatatgaaaat 44865648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 3254305 - 3254235
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaa 148  Q
    ||||| ||||||||||||||| |||| ||||| |||||||||| ||| |||||  ||||||||| ||||||    
T  3254305 aaacagcttatgacatgttcataagctgttttcagcttatttctatacactctataggatagcttataaaa 3254235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 158
Target Start/End: Complemental strand, 5069800 - 5069697
Alignment:
Q  51 agactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaac 150  Q
    ||||||||||||||||||||||||    |||||||||| ||||||||| ||| | |||| ||||||||| ||||| || || | |||| || || |||||    
T  5069800 agactgtttgagagagcttatgga----aacatcttataacatgttcataagtcattttcagcttattttcataagctttcgaagatatcttatgaaaac 5069705  T
Q  151 agattata 158  Q
    || |||||    
T  5069704 agcttata 5069697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 227
Target Start/End: Original strand, 11188172 - 11188294
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaa 204  Q
    ||||| || ||||| |||||||||||| ||||||||| || |||| || ||||| || | || ||||||||||   |||||||||  ||||||| | |||    
T  11188172 gttttcagtttattaccataaactctctaggatagcttatcaaaatagtttataactaatataaaaatagtttggttttattttatcttttgttatagaa 11188271  T
Q  205 gtatcttatacataagcacttat 227  Q
      | |||||||||||||||||||    
T  11188272 acaacttatacataagcacttat 11188294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 9836882 - 9836955
Alignment:
Q  116 atttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    |||||||||| ||||||| ||||||| || ||||||| || || |||| ||||||||||||| |||||| ||||    
T  9836882 atttccataagctctccaagatagcttatgaaaacaggttgtaacttatatgaaaatagtttgactttacttta 9836955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 189
Target Start/End: Complemental strand, 12361266 - 12361161
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 183  Q
    |||||||||||| || |||| ||||| | ||||||||||| | |||||| | ||| || || ||||||| |||||||||| ||||||| | ||| ||||     
T  12361266 cttatgacatgtccataagctgttttcaacttatttccattagctctcctgaataacttatgaaaacagcttatagcttatatgaaaacaatttgacttc 12361167  T
Q  184 atttta 189  Q
    ||||||    
T  12361166 atttta 12361161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 226
Target Start/End: Complemental strand, 13652260 - 13652147
Alignment:
Q  113 cttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatctta 212  Q
    ||||||||| ||| |||||||| |||||| |||||||||  ||||| |||| ||||||| | |||||||| |||  |  ||||| | | ||| || ||||    
T  13652260 cttatttccttaagctctccagaatagcttataaaaacaatttataacttatatgaaaacaatttcacttcattccatcttttgctatagaaatagctta 13652161  T
Q  213 tacataagcactta 226  Q
    ||||||||||||||    
T  13652160 tacataagcactta 13652147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 226
Target Start/End: Complemental strand, 13710903 - 13710790
Alignment:
Q  113 cttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatctta 212  Q
    ||||||||| ||| |||||||| |||||| |||||||||  ||||| |||| ||||||| | |||||||| |||  |  ||||| | | ||| || ||||    
T  13710903 cttatttccttaagctctccagaatagcttataaaaacaatttataacttatatgaaaacaatttcacttcattccatcttttgctatagaaatagctta 13710804  T
Q  213 tacataagcactta 226  Q
    ||||||||||||||    
T  13710803 tacataagcactta 13710790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 227
Target Start/End: Complemental strand, 26056157 - 26056016
Alignment:
Q  87 atgacatgtt-caaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttat 185  Q
    |||||||||| || |||| |||||||||||||| ||| ||  | |||| ||||||| ||||||| || | ||||||||  ||| || |||||  || |||    
T  26056157 atgacatgtttcataagctgtttttagcttattcccacaagttttccatgatagcttataaaaatagttaatagcttatttgagaacagtttggctatat 26056058  T
Q  186 tttaaattttgttttggaagtatcttatacataagcacttat 227  Q
    ||||  ||||||||| ||| || ||||||||||| |||||||    
T  26056057 tttatcttttgttttagaattagcttatacataaacacttat 26056016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 30277262 - 30277315
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattata 158  Q
    ||||| ||||||||||||||||||||| ||||||||| || ||||||| |||||    
T  30277262 gttttcagcttatttccataaactctctaggatagcttatgaaaacagcttata 30277315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 251
Target Start/End: Original strand, 36337966 - 36338063
Alignment:
Q  154 ttatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcacttatgccttaagcacttaattaagttgt 251  Q
    |||||||||| | | ||||||||| ||||||||| | | |||||| |  || |||||||||| |||||||||||||  ||| ||| ||||||||||||    
T  36337966 ttatagcttatacgtaaatagtttaactttatttgataatttgttataaaaatatcttatacttaagcacttatgctataaccacctaattaagttgt 36338063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 247
Target Start/End: Complemental strand, 42597405 - 42597312
Alignment:
Q  154 ttatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcacttatgccttaagcacttaattaag 247  Q
    ||||||||| |||||||| | ||| |||||||||||  ||||||| | ||| || |||||||||||| ||||||  | ||||||||| ||||||    
T  42597405 ttatagcttgcatgaaaacaattttactttattttatcttttgttatagaaatagcttatacataagtacttatagcataagcacttgattaag 42597312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 926555 - 926511
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttcca 122  Q
    ||||| ||||||||||||||| |||||||||| ||||||||||||    
T  926555 aaacaacttatgacatgttcataagccgttttcagcttatttcca 926511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 6509328 - 6509404
Alignment:
Q  113 cttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    |||||||| |||| ||||||||||||||| || ||||||| |||||||||| || || | | ||| |||||||||||    
T  6509328 cttatttcaataagctctccaggatagcttatgaaaacagcttatagcttatataaatacaatttgactttatttta 6509404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 7918790 - 7918874
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||| |||||||||||| || |||| || ||||||| || ||||||  |||||||||||| ||||| | ||| |||||||||||    
T  7918790 gttttcagcttatttccacaagctctacaagatagcttatgaaaacaacttatagcttacaagaaaaaaatttaactttatttta 7918874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 25869262 - 25869318
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagc 140  Q
    |||||||||||| || |||  ||||| ||||||||||||||||||||||| ||||||    
T  25869262 cttatgacatgtccataagttgttttcagcttatttccataaactctccatgatagc 25869318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 26410390 - 26410301
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagctt-atttccataaactctccagga 136  Q
    |||| |||||||| ||| |||||||||||||||||     || ||||||||| || |||| ||||||||||| |||||||||| ||||||||||    
T  26410390 acttctgagactgcttgggagagcttatggaaacag----ctcatgacatgtccagaagctgtttttagctttatttccataagctctccagga 26410301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 227
Target Start/End: Original strand, 26716450 - 26716575
Alignment:
Q  100 aagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttt 199  Q
    |||| ||||| ||||||||||| ||| ||||| ||||||| | || |||| |  |||||||||   | |||||| ||| |||||||||  ||| |||||     
T  26716450 aagctgttttcagcttatttccgtaacctctctaggataggtcattaaaaaatcttatagcttttgtaaaaataatttgactttattt--aatcttgtta 26716547  T
Q  200 tggaagtatcttatacataagcacttat 227  Q
    | |||||| |||||||||||||||||||    
T  26716548 tagaagtagcttatacataagcacttat 26716575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 43504831 - 43504747
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctt 162  Q
    ||||| |||| ||| |||| | |||| ||||| |||||||||||||||  |||||| ||||||| |||||||||  |||||||||    
T  43504831 aaacaacttacgacttgtttataagctgttttcagcttatttccataagttctccaagatagcttataaaaacatcttatagctt 43504747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 11183625 - 11183542
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagct 161  Q
    ||||| ||||||| ||||  | |||| ||||| ||||||||||||||| ||||||||| |||||  | ||||||| ||||||||    
T  11183625 aaacaacttatgatatgtctataagctgttttcagcttatttccataagctctccagggtagcttgtgaaaacagcttatagct 11183542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 189
Target Start/End: Original strand, 27728039 - 27728122
Alignment:
Q  106 tttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    |||||||||||||||||| | | ||| ||||||||| || ||||||  | |||  ||| ||||||||||||| |||||||||||    
T  27728039 tttttagcttatttccatcatccctctaggatagcttatgaaaacaactaatactttatatgaaaatagtttgactttatttta 27728122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 35869859 - 35869768
Alignment:
Q  136 atagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcacttat 227  Q
    |||||| || ||||||  |||||||||| |||||||| |||| | ||||||||| |||||||| | ||| |  |||||||||||| ||||||    
T  35869859 atagcttatgaaaacaacttatagcttatatgaaaattgtttgaatttattttatattttgttgtagaaatcgcttatacataagaacttat 35869768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 7646031 - 7645965
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaa 171  Q
    ||||| ||||||||||||||| || | |||| ||||| || ||||||  ||||||||||||||||||    
T  7646031 gttttcagcttatttccataagctttacaggttagcttatgaaaacaacttatagcttacatgaaaa 7645965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 7918412 - 7918499
Alignment:
Q  50 gagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagct 141  Q
    ||||||||||| ||||||||||| ||||||    |||| |||||||||| |||| ||||  | |||||||| |||| ||||||| |||||||    
T  7918412 gagactgtttgggagagcttatgaaaacaa----cttaagacatgttcataagctgtttccaacttatttcaataagctctccaagatagct 7918499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 8062382 - 8062324
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 163  Q
    ||||| ||||||||||||||| ||||| | ||||||| || ||||||| ||||||||||    
T  8062382 gttttcagcttatttccataatctctctaagatagcttatgaaaacagcttatagctta 8062324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 84 - 198
Target Start/End: Complemental strand, 21653155 - 21653041
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 183  Q
    ||||||||| ||||| ||||  |||| ||||||||| ||||| ||||||| |||||||||| ||| ||  || |||| |||| ||||  | ||| |||||    
T  21653155 cttatgacacgttcataagctattttcagcttattttcataagctctccaagatagctaatgaaagcaatttgtagcctacacgaaatcaatttaacttt 21653056  T
Q  184 attttaaattttgtt 198  Q
    ||||||  |||||||    
T  21653055 attttatcttttgtt 21653041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 29973251 - 29973168
Alignment:
Q  55 tgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagc-cgtttttagcttatttccataaactctccaggatagct 141  Q
    |||||||||||||||||||||||||    ||||  |||||| |||||||  ||||| || ||||||||||||| |||| |||||||||    
T  29973251 tgtttgagagagcttatggaaacaa----cttacaacatgtccaaaagctggttttcagtttatttccataaattctcaaggatagct 29973168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 30987956 - 30988067
Alignment:
Q  49 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgttttt-agcttatttccataaactctccaggatagctaataaa 147  Q
    |||| ||||||||||||||||||||||||||    |||||||||||| || ||||  ||||| || ||| |||||||| | ||| | ||||||| | |||    
T  30987956 tgagtctgtttgagagagcttatggaaacaa----cttatgacatgtccataagctatttttcagtttagttccataagccctcaaagatagcttacaaa 30988051  T
Q  148 aacagattatagctta 163  Q
    ||||| ||||| ||||    
T  30988052 aacagcttataactta 30988067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 123 - 225
Target Start/End: Complemental strand, 31884629 - 31884527
Alignment:
Q  123 taaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagca 222  Q
    ||||||||||| ||||||| || ||||||  |||||||||| ||||||| | ||  | || |||||| |||||||| | ||| || |||||||||| |||    
T  31884629 taaactctccatgatagcttatgaaaacaatttatagcttatatgaaaacaattcaatttgattttatattttgttatagaaataacttatacatatgca 31884530  T
Q  223 ctt 225  Q
    |||    
T  31884529 ctt 31884527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 39881769 - 39881815
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaaca 151  Q
    ||||| ||||||||||||||| ||||||| ||||||| |||||||||    
T  39881769 gttttcagcttatttccataagctctccatgatagcttataaaaaca 39881815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 2235653 - 2235698
Alignment:
Q  85 ttatgacatgttcaaaagccgtttttagcttatttccataaactct 130  Q
    |||||||||||||| ||| ||||||||||| |||||||||| ||||    
T  2235653 ttatgacatgttcataagtcgtttttagctcatttccataagctct 2235698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 141
Target Start/End: Original strand, 2458562 - 2458619
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagct 141  Q
    |||||| |||||||| |||| ||||| || |||||||||||| ||||| |||||||||    
T  2458562 cttatggcatgttcataagctgttttcagtttatttccataagctctctaggatagct 2458619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 11185301 - 11185236
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 143  Q
    ||||||||||| ||||||||| |||  ||||| | ||||||||||| | ||||||| |||||||||    
T  11185301 aaacatcttataacatgttcataagttgttttcaacttatttccatcagctctccatgatagctaa 11185236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 12224976 - 12225037
Alignment:
Q  165 atgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcactta 226  Q
    ||||||||||||| |||||||||||  |||||| || ||| || ||||||||||||| ||||    
T  12224976 atgaaaatagtttgactttattttatcttttgtcttagaaataacttatacataagctctta 12225037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 187
Target Start/End: Complemental strand, 30013270 - 30013189
Alignment:
Q  106 tttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattt 187  Q
    |||| ||||||||||||| |  ||| |||||||||| || ||||||| |||||||||| ||| ||| ||||| |||| ||||    
T  30013270 ttttcagcttatttccattagttctacaggatagcttatgaaaacagcttatagcttatatggaaacagtttgacttaattt 30013189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 2487968 - 2488037
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttat 117  Q
    |||| |||||||||||| |||| |||||| ||||||    ||||| |||||||||||| | |||||||||||||    
T  2487968 acttgtgagactgtttgggagaacttatgaaaacaa----cttataacatgttcaaaaactgtttttagcttat 2488037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 2493010 - 2492958
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccagga 136  Q
    ||||| ||||||||| |||  |||||| |||||||||||||||| ||||||||    
T  2493010 cttataacatgttcataagttgttttttgcttatttccataaaccctccagga 2492958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 5227586 - 5227530
Alignment:
Q  107 ttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 163  Q
    ||||||||||||| ||||| |||| || ||||||| | |||||||| ||||||||||    
T  5227586 ttttagcttattttcataagctcttcatgatagcttacaaaaacagcttatagctta 5227530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 7853722 - 7853686
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaa 80  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  7853722 acttatgagaccgtttgagaaagcttatggaaacaaa 7853686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 13410262 - 13410326
Alignment:
Q  155 tatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataa 219  Q
    ||||||||| ||||||||||||| || ||||||||| ||||||| |  |||||  ||||||||||    
T  13410262 tatagcttatatgaaaatagtttaacattattttaacttttgttgtaaaagtagtttatacataa 13410326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 44 - 76
Target Start/End: Complemental strand, 21130722 - 21130690
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaa 76  Q
    |||| ||||||||||||||||||||||||||||    
T  21130722 acttgtgagactgtttgagagagcttatggaaa 21130690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 26215487 - 26215427
Alignment:
Q  167 gaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcacttat 227  Q
    ||||||||||| |||||||||||  ||||||| | ||| || ||||||||||||| |||||    
T  26215487 gaaaatagtttaactttattttatcttttgttatagaaatagcttatacataagcgcttat 26215427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 29169121 - 29169185
Alignment:
Q  112 gcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtt 176  Q
    ||||||||||||||||||| ||||||| || | |||||||| || ||||| | ||||||| ||||    
T  29169121 gcttatttccataaactcttcaggataacttacaaaaacagcttgtagctcatatgaaaaaagtt 29169185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 31875564 - 31875637
Alignment:
Q  53 actgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactct 130  Q
    ||||||||||| |||||||||||||||    |||||||||||| || ||||| |||| | ||||||| ||||| ||||    
T  31875564 actgtttgagaaagcttatggaaacaa----cttatgacatgtccataagccattttcaacttattttcataagctct 31875637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 34849176 - 34849072
Alignment:
Q  85 ttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttta 184  Q
    |||||||||||||| |||||||||| |||| ||||||||||  ||| || || |||| || | ||||| ||||| |||| |  |||||| | | ||||||    
T  34849176 ttatgacatgttcataagccgttttcagctgatttccataagttctacaagaaagcttatgataacagcttatatcttatacaaaaataatgtgacttta 34849077  T
Q  185 tttta 189  Q
    |||||    
T  34849076 tttta 34849072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 43709316 - 43709260
Alignment:
Q  115 tatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaa 171  Q
    ||||| ||||| ||||||||||||||| || ||||||  ||||||||||| ||||||    
T  43709316 tattttcataagctctccaggatagctcatgaaaacaacttatagcttacgtgaaaa 43709260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 3e-16; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 49 - 198
Target Start/End: Complemental strand, 14295611 - 14295466
Alignment:
Q  49 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaa 148  Q
    ||||||||| |||||||||||||| |||||     ||||||| ||||  | |||| ||||| |||||| ||| | || ||||||||||||||| |  |||    
T  14295611 tgagactgtctgagagagcttatgaaaacag----cttatgatatgtcgataagctgttttcagcttacttctaaaagctctccaggatagcttacgaaa 14295516  T
Q  149 acagattatagcttacatgaaaatagtttcactttattttaaattttgtt 198  Q
    |||| |||||||||| ||||||| ||||| |||||||||||  |||||||    
T  14295515 acagcttatagcttatatgaaaacagtttgactttattttatcttttgtt 14295466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 35135728 - 35135815
Alignment:
Q  154 ttatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcacttatgccttaagcactta 241  Q
    |||||||||| ||||||||||||| |||||||||||  ||||||| | ||| |||||||||||||| |||||||   |||||||||||    
T  35135728 ttatagcttatatgaaaatagtttgactttattttatcttttgttatagaaatatcttatacataaacacttatatgttaagcactta 35135815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 2468537 - 2468440
Alignment:
Q  49 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaa 148  Q
    |||||||||||  |||| |||||||||||||   | ||||||||||| || |||| ||||| |||||| ||||||||||||| |||||||||| ||||||    
T  2468537 tgagactgttttggagaacttatggaaacaa---ttttatgacatgtccataagctgttttgagcttacttccataaactcttcaggatagcttataaaa 2468441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 37611175 - 37611278
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 143  Q
    |||| ||||| |||||||||||||||||| ||||||    ||| ||||||||||| |||| ||||| || |||||||||||| ||||||| ||||||| |    
T  37611175 acttgtgagattgtttgagagagcttatgaaaacaa----cttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagctta 37611270  T
Q  144 taaaaaca 151  Q
    | ||||||    
T  37611271 tgaaaaca 37611278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 37787905 - 37788008
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 143  Q
    |||| ||||| |||||||||||||||||| ||||||    ||| ||||||||||| |||| ||||| || |||||||||||| ||||||| ||||||| |    
T  37787905 acttgtgagattgtttgagagagcttatgaaaacaa----cttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagctta 37788000  T
Q  144 taaaaaca 151  Q
    | ||||||    
T  37788001 tgaaaaca 37788008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 78 - 227
Target Start/End: Complemental strand, 39105545 - 39105395
Alignment:
Q  78 aaacatcttatgacat-gttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtt 176  Q
    ||||| |||||||||| ||||| ||||  |||||||||||||| |||||  |||||| ||||||| || |||||||||||||||||| | ||||| | ||    
T  39105545 aaacagcttatgacattgttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaacagattatagcttatacgaaaacaatt 39105446  T
Q  177 tcactttattttaaattttgttttggaagtatcttatacataagcacttat 227  Q
    | |||| |||| | |||| | | | ||| || ||||||||||||| |||||    
T  39105445 taacttcatttcatatttagctatagaaatagcttatacataagcgcttat 39105395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 222
Target Start/End: Complemental strand, 16889788 - 16889671
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaa 204  Q
    ||||| || |||||||||||||||||| || |||||| || ||||||| |||||||||  || |||| ||||| |||| | ||||  ||||||| |||||    
T  16889788 gttttcagattatttccataaactctctagcatagcttatgaaaacagcttatagcttctataaaaacagtttgacttaagtttatcttttgttatggaa 16889689  T
Q  205 gtatcttatacataagca 222  Q
     || ||||||||||||||    
T  16889688 atagcttatacataagca 16889671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 187
Target Start/End: Complemental strand, 17368756 - 17368647
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| ||||||||||||||| | || ||||| ||||||||||||||| ||||||| ||||||| || ||||||  |||||| |||||  |||| |||||    
T  17368756 aaacaacttatgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaaacaacttatagattacacaaaaacagttt 17368657  T
Q  178 cactttattt 187  Q
     |||| ||||    
T  17368656 gacttcattt 17368647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 171
Target Start/End: Original strand, 37526164 - 37526282
Alignment:
Q  49 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaa 148  Q
    |||||||||||||||||||||||| | |||| |    ||||||||||| | |||| ||||| ||||||||||||||| |||||||| | | || || |||    
T  37526164 tgagactgtttgagagagcttatgaatacaacc----tatgacatgttaataagctgttttcagcttatttccataagctctccagaacaacttatgaaa 37526259  T
Q  149 acagattatagcttacatgaaaa 171  Q
    |||  |||||||||| |||||||    
T  37526260 acaacttatagcttatatgaaaa 37526282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 171
Target Start/End: Original strand, 37588325 - 37588443
Alignment:
Q  49 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaa 148  Q
    |||||||||||||||||||||||| | |||| |    ||||| ||||| | |||| ||||| ||||||||||||||| |||||||| ||| || || |||    
T  37588325 tgagactgtttgagagagcttatgaatacaacc----tatgaaatgttaataagctgttttcagcttatttccataagctctccagaataacttatgaaa 37588420  T
Q  149 acagattatagcttacatgaaaa 171  Q
    |||  |||||||||| |||||||    
T  37588421 acaacttatagcttatatgaaaa 37588443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 17258879 - 17258983
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 183  Q
    ||||||||||||||| |||| ||||| ||||||||| ||||| |||| |||||||| | || ||||||| |||| | ||  | ||||||||||| |||||    
T  17258879 cttatgacatgttcataagctgttttcagcttattttcataagctcttcaggatagtttatgaaaacagcttattgattgtacgaaaatagtttgacttt 17258978  T
Q  184 atttt 188  Q
    |||||    
T  17258979 atttt 17258983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 56 - 221
Target Start/End: Complemental strand, 32172751 - 32172590
Alignment:
Q  56 gtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagatt 155  Q
    ||||| ||||||||||||||||||    |||||||||||| || ||||| |||| ||||||||||||| |  ||| || ||||||| || ||||||| ||    
T  32172751 gtttgggagagcttatggaaacaa----cttatgacatgtccataagccattttcagcttatttccattagttcttcatgatagcttatgaaaacagctt 32172656  T
Q  156 atagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagc 221  Q
    |||||||| ||| ||| |  || |||| ||||||  ||||||| | ||| ||  ||||||||||||    
T  32172655 atagcttatatgtaaacaacttgacttcattttatcttttgttgtagaaatagtttatacataagc 32172590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 177
Target Start/End: Original strand, 36542272 - 36542371
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    |||||||||||||||||| || |||| ||||||| |||||||||| || ||||| ||||||||| ||  || ||| |||||||||| |||| || |||||    
T  36542272 aaacatcttatgacatgtccagaagctgtttttaacttatttccacaagctctctaggatagcttatggaatcagcttatagcttatatgagaacagttt 36542371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 3951651 - 3951548
Alignment:
Q  122 ataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagc 221  Q
    |||| ||||||||||||||| |||||||||| |||||||| | ||||||||| ||| | || ||||||||  ||||| |  || ||| ||||||||||||    
T  3951651 ataatctctccaggatagcttataaaaacagcttatagctaatatgaaaataatttgatttcattttaaa--ttgttgtataaatattttatacataagc 3951554  T
Q  222 acttat 227  Q
    ||||||    
T  3951553 acttat 3951548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 106 - 227
Target Start/End: Complemental strand, 29588931 - 29588811
Alignment:
Q  106 tttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaag 205  Q
    |||| |||||||||||||||||||| ||  |||||| |  ||||||  |||||||||| ||||||| | |||  | |||||||| |||||||| | |||     
T  29588931 ttttcagcttatttccataaactcttcaacatagcttacgaaaacactttatagcttatatgaaaacaatttt-cattattttatattttgttatagaaa 29588833  T
Q  206 tatcttatacataagcacttat 227  Q
    || |||||||||||||||||||    
T  29588832 tagcttatacataagcacttat 29588811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 28586735 - 28586876
Alignment:
Q  53 actgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 152  Q
    |||||||| ||||||||||||||| |     |||||||||| | |  |||| ||||| |||||||||| |||| ||||| |||||||||  | |||||||    
T  28586735 actgtttgggagagcttatggaaatag----cttatgacatatccgtaagctgttttcagcttatttcgataagctctctaggatagctcgtcaaaacag 28586830  T
Q  153 attatagcttacatgaaaatagtttcactttattttaaattttgtt 198  Q
     |||||  ||| ||||||| ||||| |||||||||||  |||||||    
T  28586831 cttataatttatatgaaaacagtttgactttattttatcttttgtt 28586876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 29844970 - 29845018
Alignment:
Q  111 agcttatttccataaactctccaggatagctaataaaaacagattatag 159  Q
    ||||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  29844970 agcttatttccataagctctccagggtagctaataaaaacagcttatag 29845018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 36774703 - 36774771
Alignment:
Q  84 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 152  Q
    |||||||||||| | ||||  | ||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  36774703 cttatgacatgtcctaaagatggtttcagcttatttccataagctctccaggatagcttataaaaacag 36774771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 41957441 - 41957551
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| |||||||||||| || |||  ||||| | ||||||| |||||  |||| ||||||||| || ||||||| ||||| |||||||||||| | |||    
T  41957441 aaacagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaacagcttataacttacatgaaaacaattt 41957540  T
Q  178 cactttatttt 188  Q
     |||| |||||    
T  41957541 aacttcatttt 41957551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 251
Target Start/End: Complemental strand, 4855805 - 4855605
Alignment:
Q  44 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 143  Q
    |||| ||||||||||||||||||||||| | |||       |||||||||||||| |||| |||||  |||||||||  ||| ||||   |||||| | |    
T  4855805 acttgtgagactgtttgagagagcttatagcaac-------ttatgacatgttcagaagctgttttcggcttatttctgtaagctctttgggatagttta 4855713  T
Q  144 taaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcacttatgccttaagcacttaat 243  Q
    | ||||||  ||||| |||| |||| || | ||| |||||||||||  ||||||| |  || || || ||||||||| ||||||||  |||| | |||||    
T  4855712 tgaaaacaacttataacttatatgataacaatttaactttattttattttttgttataaaaatagctaatacataagtacttatgctataagtatttaat 4855613  T
Q  244 taagttgt 251  Q
    ||||||||    
T  4855612 taagttgt 4855605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 173
Target Start/End: Original strand, 32408616 - 32408677
Alignment:
Q  112 gcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaata 173  Q
    |||||||||||||| |||| |||||||||| || |||| || |||||||||| |||||||||    
T  32408616 gcttatttccataagctcttcaggatagcttatgaaaatagtttatagcttatatgaaaata 32408677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 189
Target Start/End: Complemental strand, 35960516 - 35960383
Alignment:
Q  51 agactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaac 150  Q
    ||||| ||||||||||||||||||| |||    |||| ||||||| || |||  ||||||||||||||||  ||  || |||||||||||| || ||| |    
T  35960516 agactatttgagagagcttatggaagcaa----cttacgacatgtccataagatgtttttagcttatttctttacgctttccaggatagcttatgaaatc 35960421  T
Q  151 agattatagcttacatgaaaatagtttcactttatttta 189  Q
    |  |||||| ||| ||| ||||||||| |||||||||||    
T  35960420 aacttatagtttatatg-aaatagtttgactttatttta 35960383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 6183497 - 6183429
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaata 173  Q
    ||||| ||||||||||||||| |||||||  | |||| || || |||| ||||||||||||||||||||    
T  6183497 gttttcagcttatttccataagctctccaaaacagcttatgaatacagcttatagcttacatgaaaata 6183429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 26516445 - 26516369
Alignment:
Q  113 cttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    |||||||||||||| ||| |  ||||||| || ||||||| ||||| |||| |||||| |||||| |||||||||||    
T  26516445 cttatttccataaaatctgctagatagcttatgaaaacagtttataacttatatgaaagtagtttgactttatttta 26516369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 28413274 - 28413334
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggata 138  Q
    ||||| ||||||  ||||||| |||| ||||| ||||||||||||||||||||||| ||||    
T  28413274 aaacagcttatggaatgttcataagctgttttcagcttatttccataaactctccaagata 28413334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 29201583 - 29201528
Alignment:
Q  108 tttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 163  Q
    ||||||| |||||||||| ||||||||||||| | || ||||||| ||||||||||    
T  29201583 tttagctaatttccataagctctccaggataggttatgaaaacagcttatagctta 29201528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 189
Target Start/End: Complemental strand, 30217126 - 30217051
Alignment:
Q  114 ttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    |||||||||||| ||||||||||||||| || ||| ||| |||||| |||| ||||| || ||  |||||||||||    
T  30217126 ttatttccataagctctccaggatagcttatgaaagcagcttatagattacgtgaaattaattagactttatttta 30217051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 35095750 - 35095850
Alignment:
Q  48 atgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaa 147  Q
    |||||||||||||  |||||||||||||| |    ||||||||||||| || | |||||||| | ||||||||||||| || | || ||||||| || ||    
T  35095750 atgagactgtttggaagagcttatggaaata----tcttatgacatgtacatatgccgttttcaacttatttccataagctttacaagatagctcatgaa 35095845  T
Q  148 aacag 152  Q
    |||||    
T  35095846 aacag 35095850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 38047886 - 38047965
Alignment:
Q  119 tccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 198  Q
    ||||||| ||||||||||||||| || |||||||  |||||  || ||||||||| ||| |||||||||||  |||||||    
T  38047886 tccataagctctccaggatagcttatgaaaacagcatatagtatatatgaaaataatttgactttattttatcttttgtt 38047965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 499721 - 499775
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctcc 132  Q
    ||||| ||||||||||||| | |||  ||||| ||||||||||||||||||||||    
T  499721 aaacagcttatgacatgttaacaagttgttttcagcttatttccataaactctcc 499775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 227
Target Start/End: Original strand, 9202737 - 9202887
Alignment:
Q  78 aaacatcttatgacat-gttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtt 176  Q
    ||||| |||||||||| ||||| |||| ||||  ||||||||| |||||  ||| || |||| || || ||||||| |||| ||||| ||||||| | ||    
T  9202737 aaacagcttatgacattgttcataagctgtttccagcttattttcataagttcttcaagataacttatgaaaacagcttattgcttatatgaaaacaatt 9202836  T
Q  177 tcactttattttaaattttgttttggaagtatcttatacataagcacttat 227  Q
    | |||||||||||  ||||| |   ||| || |||||| ||||||||||||    
T  9202837 taactttattttatcttttgctacagaaatagcttatatataagcacttat 9202887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 18853064 - 18853006
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 163  Q
    ||||||||||||||||||||| || ||| ||||||| ||| ||||||  ||||||||||    
T  18853064 gtttttagcttatttccataagctatcctggatagccaattaaaacatcttatagctta 18853006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 100 - 198
Target Start/End: Complemental strand, 35551006 - 35550909
Alignment:
Q  100 aagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 198  Q
    |||||| |||| |||||| ||||| |  |||||||||||| | |||||||||| |||||| ||| |||||||||  || |||||||||||  |||||||    
T  35551006 aagccgattttggcttatctccattagttctccaggataggttataaaaacagcttatagtttatatgaaaata-attgactttattttatcttttgtt 35550909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 36638819 - 36638753
Alignment:
Q  86 tatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 152  Q
    ||||||||||||| ||||  |||| ||||||||||||||| ||||| |||||| || || |||||||    
T  36638819 tatgacatgttcataagcttttttcagcttatttccataagctctctaggataacttatgaaaacag 36638753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 39941850 - 39941804
Alignment:
Q  149 acagattatagcttacatgaaaatagtttcactttattttaaatttt 195  Q
    |||| ||||||||||  |||||||||||| |||||||||||||||||    
T  39941850 acagcttatagcttaattgaaaatagtttgactttattttaaatttt 39941804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 227
Target Start/End: Original strand, 40205064 - 40205211
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 177  Q
    ||||| ||||| |||||| || || | ||||| |||||||||| |||| ||||||||||||||| || ||||||  |  ||| ||| |||||||   | |    
T  40205064 aaacagcttataacatgtccataatctgttttcagcttatttctataagctctccaggatagcttatgaaaacaact--tagtttatatgaaaactatct 40205161  T
Q  178 cactttattttaaattttgttttggaagtatcttatacataagcacttat 227  Q
     |||  ||||||  ||||||| | |||||||||||||||| |||||||||    
T  40205162 gactcaattttaccttttgttatagaagtatcttatacatgagcacttat 40205211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 163
Target Start/End: Complemental strand, 2568738 - 2568653
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 163  Q
    ||||| |||||||||| |||| |||   |||||||||||||| ||| | ||||||| ||||||| || ||||||  ||||||||||    
T  2568738 aaacagcttatgacatattcataagttatttttagcttattttcattagctctccatgatagcttatgaaaacaacttatagctta 2568653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 2880537 - 2880610
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaaca 151  Q
    ||||| || |||| ||||||| |||  ||||| |||||||||||||||||||| | | |||||| |||||||||    
T  2880537 aaacagctaatgatatgttcataaggtgttttcagcttatttccataaactcttctgaatagcttataaaaaca 2880610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 159
Target Start/End: Complemental strand, 4619808 - 4619706
Alignment:
Q  53 actgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 152  Q
    |||||||| ||||||||||| ||||||    || |||||||||||| |||| | ||| | |||||||||||||  |||||| ||||||| || || ||||    
T  4619808 actgtttgggagagcttatgaaaacaa----ctaatgacatgttcataagctggtttcaccttatttccataagttctccatgatagcttatgaagacag 4619713  T
Q  153 attatag 159  Q
     ||||||    
T  4619712 tttatag 4619706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 38766900 - 38766953
Alignment:
Q  145 aaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 198  Q
    ||||| |||||||| |||| ||||||||||||| |||||||||||  |||||||    
T  38766900 aaaaatagattataacttagatgaaaatagtttaactttattttagcttttgtt 38766953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 39941735 - 39941694
Alignment:
Q  154 ttatagcttacatgaaaatagtttcactttattttaaatttt 195  Q
    ||||||||||  |||||||||||| |||||||||||||||||    
T  39941735 ttatagcttaattgaaaatagtttgactttattttaaatttt 39941694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 1899234 - 1899178
Alignment:
Q  78 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccag 134  Q
    ||||| |||||||||||| || |||  ||||| |||||||||||||||| |||||||    
T  1899234 aaacagcttatgacatgtgcataagttgttttcagcttatttccataaattctccag 1899178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 7096204 - 7096264
Alignment:
Q  165 atgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcactt 225  Q
    |||||||| |||| |||||||||||  ||||||| | ||| || |||||||||||||||||    
T  7096204 atgaaaatggtttgactttattttatcttttgttatagaaatagcttatacataagcactt 7096264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 10272448 - 10272532
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||| ||||||||| ||||||||||||| ||| ||| || ||||||  |||||||||| | ||||| | ||| |||| ||||||    
T  10272448 gttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagcttatacgaaaacaatttgacttaatttta 10272532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 10391375 - 10391331
Alignment:
Q  124 aaactctccaggatagctaataaaaacagattatagcttacatga 168  Q
    |||||||| ||||||||| ||||||||| ||||||||||| ||||    
T  10391375 aaactctctaggatagcttataaaaacaaattatagcttatatga 10391331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 100 - 227
Target Start/End: Original strand, 16944995 - 16945120
Alignment:
Q  100 aagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttt 199  Q
    |||| ||||| ||||||||| | ||| |||| |||||||| |||| |||| || |||||||||  ||||||| | ||| |||  ||||||  |||| ||     
T  16944995 aagctgttttcagcttatttacttaagctcttcaggatagttaatgaaaatagcttatagcttctatgaaaacaatttaact--attttatcttttcttg 16945092  T
Q  200 tggaagtatcttatacataagcacttat 227  Q
    | ||| || |||||||||||||||||||    
T  16945093 tagaaatagcttatacataagcacttat 16945120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 35553211 - 35553271
Alignment:
Q  111 agcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaa 171  Q
    ||||||||||||||| |||||||| |||||  || |||| || |||||||||| |||||||    
T  35553211 agcttatttccataagctctccagaatagcgtatgaaaatagtttatagcttatatgaaaa 35553271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 39750155 - 39750103
Alignment:
Q  146 aaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 198  Q
    ||||||| ||||| |||| ||||||||||||| |||||||||||  |||||||    
T  39750155 aaaacaggttataacttatatgaaaatagtttgactttattttatcttttgtt 39750103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 90 - 227
Target Start/End: Complemental strand, 2899 - 2762
Alignment:
Q  90 acatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 189  Q
    ||||||||| |||  |||||||||||| |  ||| | ||||||||||||||| |||||      |||| ||||| |||| |||||||| |||||||||||    
T  2899 acatgttcataagttgtttttagcttactctcatgacctctccaggatagcttataaagcatttttatggcttatatgagaatagtttgactttatttta 2800  T
Q  190 aattttgttttggaagtatcttatacataagcacttat 227  Q
      ||||||| | ||| || |||||||||||||||||||    
T  2799 tcttttgttatagaaatagcttatacataagcacttat 2762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 1140 - 1213
Alignment:
Q  154 ttatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcacttat 227  Q
    |||| ||||| |||| |||||||| |||||||||||  ||||||| | ||| || |||||||||||||||||||    
T  1140 ttatggcttatatgagaatagtttgactttattttatcttttgttatagaaatagcttatacataagcacttat 1213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 9606 - 9668
Alignment:
Q  53 actgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttattt 119  Q
    ||||||||||||| |||||| ||||||    ||||| ||||||||| |||| |||||||||||||||    
T  9606 actgtttgagagaacttatgaaaacaa----cttattacatgttcataagctgtttttagcttattt 9668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0584 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0584
Description:

Target: scaffold0584; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 1350 - 1430
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatt 186  Q
    ||||||| ||||||| ||||| || ||||||||||||| | |||| || |||||||||| |||||| |||||| | ||||||    
T  1350 gtttttatcttattttcataagct-tccaggatagctagttaaaatagcttatagcttatatgaaagtagtttaagtttatt 1430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 1790 - 1863
Alignment:
Q  154 ttatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcacttat 227  Q
    ||||||| || |||||||||  || |||||||||||  ||||||| | ||| ||||||||| ||||||||||||    
T  1790 ttatagcgtatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataagcacttat 1863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 3880 - 3953
Alignment:
Q  154 ttatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtatcttatacataagcacttat 227  Q
    ||||||| || |||||||||  || |||||||||||  ||||||| | ||| ||||||||| ||||||||||||    
T  3880 ttatagcgtatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataagcacttat 3953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0446 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0446
Description:

Target: scaffold0446; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 5476 - 5556
Alignment:
Q  105 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatt 186  Q
    ||||||| ||||||| ||||| || ||||||||||||| | |||| || |||||||||| |||||| |||||| | ||||||    
T  5476 gtttttatcttattttcataagct-tccaggatagctagttaaaatagcttatagcttatatgaaagtagtttaagtttatt 5556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 7003 - 6947
Alignment:
Q  107 ttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 163  Q
    ||||||||||||| ||||| |||| || ||||||| | |||||||| ||||||||||    
T  7003 ttttagcttattttcataagctcttcatgatagcttacaaaaacagcttatagctta 6947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University