View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6184_high_25 (Length: 261)
Name: NF6184_high_25
Description: NF6184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6184_high_25 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 247
Target Start/End: Original strand, 37474944 - 37475180
Alignment:
| Q |
11 |
caaagggccagagattgcaaaaatgatgatattcaaagaaatcatggaggtaatgaaactaatattttaaaggcactcccaatcaactataccatacgtt |
110 |
Q |
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| T |
37474944 |
caaagagccagagattgcaaaaatgatgatattcaaagaaatcatggaggtaatgaaactaatattttaaaggcactcccaatcaactataccataagtt |
37475043 |
T |
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| Q |
111 |
ttctataggtccagcatgtaaaaacaccccattattctccttaaacctgtgcatgaaattgtatggaaccaacaatatacattcacataatttcgtgaaa |
210 |
Q |
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| T |
37475044 |
ttctataggtccagcatgtaaaaacaccccattattctccttaaacctgtgcatgaaattgtatggaaccaacaatatacattcacataatttcgtgaaa |
37475143 |
T |
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| Q |
211 |
agattagattattcgctacggaaaaacgtgttcctaa |
247 |
Q |
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| T |
37475144 |
agattagattattcgctacggaaaaacgtgttcctaa |
37475180 |
T |
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