View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6184_high_6 (Length: 549)
Name: NF6184_high_6
Description: NF6184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6184_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 499; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 499; E-Value: 0
Query Start/End: Original strand, 7 - 533
Target Start/End: Original strand, 7789739 - 7790265
Alignment:
| Q |
7 |
acatcatcacattattacgagtcttcattttatcaaagaaagattttgcaacagtgacctctccacatttcgcgtaaaatgctgtaagcgagatgagcaa |
106 |
Q |
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| T |
7789739 |
acatcatcactttattaggagtcttcattttatcaaagaaagattttgcaacagtgacctctccacatttcgcgtaaaatgctgtaagcgagatgagcaa |
7789838 |
T |
|
| Q |
107 |
atccggctcgtcttcaagacccattttaatgatacaaccatgaagagatcttccttgctccaaatcatctacatcagtataagctctcataacactcacc |
206 |
Q |
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| T |
7789839 |
atccggctcctcttcaagacccattttaatgatacaaccatgaagagatcttccttgctccaaatcatctacatcagtataagctctcataacactcacc |
7789938 |
T |
|
| Q |
207 |
aacgaaatccaatccggtttaacatcagtctttctcatttgatcaaacattctcaaggcttcccaaggctccccattctgtccatatccagaaacgattg |
306 |
Q |
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| T |
7789939 |
aacgaaatccaatccggtttaacatcagtctttctcatttgatcaaacattctcaatgcttcccaaggctccccattctgtccatatccagaaacgattg |
7790038 |
T |
|
| Q |
307 |
cagtccacgaaacaattgttctatcatataacctatcaaacaccattctcgccataccaattcgaccacatttagcatacaacgccacaagaccgttctg |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
7790039 |
cagtccacgaaacaattgttctatcatataacctatcaaacaccattctcgccataccaattcgaccacatttagcatacaacgccacaagaccattctg |
7790138 |
T |
|
| Q |
407 |
tacaaaaacatgcgacccaaatccataaacaattacatccgcatgaaccaaacaactcaaatcgaaatccaacaactcactacaagctttaagtacacaa |
506 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
7790139 |
tacaaaaacatgcgacccaaatccataaacaattacatgcgcatgaaccaaacaactcaaaccgaaatccaacaactcactacaagctttaagtacacaa |
7790238 |
T |
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| Q |
507 |
ggaaaagtgaacttatcgggatgcaat |
533 |
Q |
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| T |
7790239 |
ggaaaagtgaacttatcgggatgcaat |
7790265 |
T |
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