View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6184_low_15 (Length: 417)

Name: NF6184_low_15
Description: NF6184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6184_low_15
NF6184_low_15
[»] chr2 (33 HSPs)
chr2 (16-412)||(2665755-2666151)
chr2 (219-302)||(44860319-44860404)
chr2 (234-298)||(34784961-34785027)
chr2 (220-270)||(21616762-21616812)
chr2 (223-269)||(36281688-36281734)
chr2 (221-302)||(2331795-2331876)
chr2 (221-270)||(30527604-30527653)
chr2 (234-270)||(20922937-20922973)
chr2 (241-302)||(28524447-28524510)
chr2 (221-302)||(22084805-22084890)
chr2 (220-270)||(23718026-23718076)
chr2 (220-270)||(24105698-24105748)
chr2 (220-270)||(31808077-31808127)
chr2 (220-270)||(37411253-37411303)
chr2 (219-303)||(4207856-4207941)
chr2 (221-274)||(28412351-28412404)
chr2 (220-269)||(28677909-28677958)
chr2 (221-266)||(31018591-31018636)
chr2 (221-270)||(35449514-35449563)
chr2 (221-270)||(39279676-39279725)
chr2 (170-267)||(40361766-40361862)
chr2 (234-270)||(20242736-20242772)
chr2 (220-271)||(19573978-19574029)
chr2 (223-266)||(23921256-23921299)
chr2 (238-302)||(35056886-35056952)
chr2 (220-275)||(36409631-36409686)
chr2 (228-270)||(5367200-5367242)
chr2 (220-270)||(16069263-16069313)
chr2 (220-270)||(18276521-18276571)
chr2 (225-267)||(35191591-35191633)
chr2 (228-265)||(21782832-21782869)
chr2 (220-264)||(30404865-30404909)
chr2 (233-302)||(38355862-38355933)
[»] scaffold0123 (1 HSPs)
scaffold0123 (219-302)||(44500-44585)
[»] chr8 (39 HSPs)
chr8 (219-290)||(11803258-11803331)
chr8 (220-270)||(39954288-39954338)
chr8 (220-270)||(4786347-4786397)
chr8 (192-270)||(7472524-7472602)
chr8 (228-270)||(14731720-14731762)
chr8 (220-270)||(34897085-34897135)
chr8 (226-270)||(33405393-33405437)
chr8 (170-302)||(2572031-2572164)
chr8 (220-270)||(11927095-11927145)
chr8 (228-270)||(13844605-13844647)
chr8 (228-299)||(15816107-15816180)
chr8 (220-270)||(24362211-24362261)
chr8 (220-269)||(4611534-4611583)
chr8 (223-268)||(13018284-13018329)
chr8 (221-270)||(20785474-20785523)
chr8 (228-297)||(29776044-29776113)
chr8 (218-270)||(12570517-12570569)
chr8 (192-264)||(24669406-24669477)
chr8 (226-266)||(31580140-31580180)
chr8 (228-267)||(14134707-14134746)
chr8 (228-266)||(3025559-3025597)
chr8 (178-264)||(4298901-4298985)
chr8 (220-270)||(11944665-11944715)
chr8 (225-267)||(24447034-24447076)
chr8 (228-270)||(27213555-27213597)
chr8 (228-270)||(31236586-31236628)
chr8 (228-270)||(34222955-34222997)
chr8 (218-267)||(12570746-12570795)
chr8 (230-267)||(26529751-26529788)
chr8 (237-270)||(26902184-26902217)
chr8 (221-270)||(33382028-33382077)
chr8 (222-275)||(37283814-37283867)
chr8 (228-264)||(8342980-8343016)
chr8 (228-264)||(8343324-8343360)
chr8 (219-259)||(18067954-18067994)
chr8 (234-270)||(18964191-18964227)
chr8 (202-266)||(20679408-20679471)
chr8 (228-264)||(20873077-20873113)
chr8 (230-279)||(22493504-22493555)
[»] chr3 (40 HSPs)
chr3 (220-270)||(32804549-32804599)
chr3 (223-270)||(49505163-49505210)
chr3 (228-270)||(11313809-11313851)
chr3 (220-270)||(16192759-16192809)
chr3 (220-302)||(25064909-25064991)
chr3 (220-302)||(55212963-55213046)
chr3 (229-301)||(15812799-15812871)
chr3 (227-287)||(2731819-2731881)
chr3 (228-308)||(11665952-11666034)
chr3 (221-267)||(4201397-4201443)
chr3 (220-270)||(7928450-7928500)
chr3 (221-292)||(8039820-8039893)
chr3 (219-326)||(34307737-34307840)
chr3 (228-302)||(4987266-4987342)
chr3 (228-302)||(14209121-14209197)
chr3 (221-266)||(14840304-14840349)
chr3 (220-302)||(15796269-15796353)
chr3 (228-265)||(27277852-27277889)
chr3 (220-264)||(10268501-10268545)
chr3 (220-267)||(7614427-7614474)
chr3 (220-267)||(8842330-8842376)
chr3 (220-267)||(10690274-10690321)
chr3 (228-275)||(11251986-11252033)
chr3 (231-270)||(15314885-15314924)
chr3 (223-270)||(38731221-38731268)
chr3 (228-298)||(2620034-2620104)
chr3 (220-266)||(8383257-8383303)
chr3 (220-270)||(25093502-25093552)
chr3 (225-263)||(28098143-28098181)
chr3 (228-270)||(48202278-48202320)
chr3 (219-264)||(1509538-1509583)
chr3 (219-268)||(9624640-9624689)
chr3 (225-270)||(11658820-11658865)
chr3 (228-269)||(12704015-12704056)
chr3 (228-302)||(17005594-17005670)
chr3 (230-270)||(8789559-8789599)
chr3 (228-268)||(11493372-11493412)
chr3 (192-264)||(26508083-26508154)
chr3 (234-270)||(35222952-35222988)
chr3 (228-264)||(55401083-55401119)
[»] chr7 (42 HSPs)
chr7 (192-298)||(15902795-15902902)
chr7 (220-292)||(29787356-29787428)
chr7 (220-298)||(32308120-32308200)
chr7 (220-268)||(27093424-27093472)
chr7 (220-268)||(27184829-27184877)
chr7 (219-270)||(8160415-8160466)
chr7 (219-294)||(11700802-11700877)
chr7 (223-270)||(17851434-17851481)
chr7 (220-270)||(1433454-1433504)
chr7 (220-270)||(2948683-2948733)
chr7 (226-281)||(5233635-5233692)
chr7 (186-267)||(5235953-5236033)
chr7 (234-270)||(18213042-18213078)
chr7 (218-270)||(27732248-27732300)
chr7 (228-270)||(3721101-3721143)
chr7 (228-270)||(7328700-7328742)
chr7 (228-270)||(16341504-16341546)
chr7 (220-270)||(20549791-20549841)
chr7 (220-270)||(22602719-22602769)
chr7 (220-270)||(33384591-33384641)
chr7 (220-304)||(49088810-49088892)
chr7 (193-270)||(2425742-2425818)
chr7 (220-302)||(26329357-26329441)
chr7 (228-301)||(6630888-6630963)
chr7 (218-270)||(42720899-42720951)
chr7 (228-300)||(24339650-24339724)
chr7 (227-270)||(38143230-38143273)
chr7 (220-270)||(5548676-5548726)
chr7 (228-270)||(12278843-12278885)
chr7 (220-270)||(19206050-19206100)
chr7 (220-270)||(22484025-22484075)
chr7 (228-270)||(22868050-22868092)
chr7 (228-270)||(24146824-24146866)
chr7 (220-286)||(30731037-30731103)
chr7 (228-265)||(2424622-2424659)
chr7 (227-264)||(9408349-9408386)
chr7 (220-269)||(23191896-23191945)
chr7 (230-267)||(35493423-35493460)
chr7 (234-267)||(39138458-39138491)
chr7 (230-270)||(9482944-9482984)
chr7 (220-268)||(10377507-10377555)
chr7 (240-268)||(41020516-41020544)
[»] chr6 (53 HSPs)
chr6 (200-302)||(25038046-25038149)
chr6 (220-270)||(5732519-5732569)
chr6 (170-302)||(16766648-16766781)
chr6 (228-270)||(7086803-7086845)
chr6 (220-270)||(19040352-19040402)
chr6 (174-264)||(25096378-25096467)
chr6 (221-275)||(31579229-31579283)
chr6 (220-298)||(5970087-5970167)
chr6 (221-270)||(7265602-7265651)
chr6 (228-281)||(8805570-8805623)
chr6 (219-267)||(5462685-5462733)
chr6 (220-267)||(9658879-9658926)
chr6 (234-302)||(16488565-16488635)
chr6 (219-266)||(32511679-32511726)
chr6 (228-270)||(9025503-9025545)
chr6 (228-270)||(9195763-9195805)
chr6 (220-270)||(10842532-10842582)
chr6 (220-270)||(10888983-10889033)
chr6 (228-270)||(17302355-17302397)
chr6 (220-266)||(17341677-17341723)
chr6 (228-302)||(7248366-7248442)
chr6 (221-270)||(30866153-30866202)
chr6 (221-270)||(32298616-32298665)
chr6 (226-306)||(4118304-4118386)
chr6 (223-270)||(9617437-9617484)
chr6 (179-270)||(13851696-13851786)
chr6 (221-271)||(1532241-1532291)
chr6 (228-270)||(7151420-7151462)
chr6 (220-270)||(7377979-7378029)
chr6 (220-298)||(8713979-8714060)
chr6 (220-270)||(9027178-9027228)
chr6 (220-270)||(9629383-9629433)
chr6 (232-270)||(11591879-11591917)
chr6 (231-269)||(13360382-13360420)
chr6 (228-342)||(17435207-17435324)
chr6 (228-270)||(24832596-24832638)
chr6 (228-270)||(26178690-26178732)
chr6 (232-270)||(26562701-26562739)
chr6 (225-267)||(32248937-32248979)
chr6 (219-269)||(32320679-32320729)
chr6 (221-263)||(34447374-34447416)
chr6 (181-266)||(7625084-7625168)
chr6 (228-286)||(9522899-9522959)
chr6 (176-302)||(10294064-10294191)
chr6 (228-269)||(24833243-24833284)
chr6 (228-286)||(34073338-34073398)
chr6 (220-268)||(677837-677885)
chr6 (228-268)||(7996389-7996429)
chr6 (228-268)||(8022372-8022412)
chr6 (218-270)||(14721239-14721291)
chr6 (238-270)||(17327664-17327696)
chr6 (228-264)||(17841604-17841640)
chr6 (218-270)||(21885790-21885842)
[»] chr1 (63 HSPs)
chr1 (228-302)||(12713302-12713378)
chr1 (228-302)||(12717393-12717469)
chr1 (220-270)||(39953155-39953205)
chr1 (220-267)||(34257922-34257969)
chr1 (230-298)||(44482240-44482310)
chr1 (220-270)||(1864889-1864939)
chr1 (176-270)||(9709777-9709870)
chr1 (181-270)||(7918220-7918308)
chr1 (228-302)||(12707848-12707924)
chr1 (228-269)||(14332652-14332693)
chr1 (217-266)||(25272479-25272528)
chr1 (220-297)||(17754311-17754390)
chr1 (227-270)||(39130776-39130819)
chr1 (220-270)||(2784556-2784606)
chr1 (220-270)||(13997883-13997933)
chr1 (220-270)||(25098564-25098614)
chr1 (230-293)||(25361896-25361961)
chr1 (220-302)||(26238091-26238171)
chr1 (219-302)||(34371713-34371797)
chr1 (228-270)||(34712392-34712434)
chr1 (220-266)||(36878461-36878507)
chr1 (221-270)||(6427351-6427400)
chr1 (228-302)||(16164290-16164366)
chr1 (228-269)||(40181879-40181920)
chr1 (170-266)||(1486722-1486817)
chr1 (230-270)||(19324572-19324612)
chr1 (234-270)||(30749854-30749890)
chr1 (234-270)||(30771305-30771341)
chr1 (220-264)||(41877485-41877529)
chr1 (228-293)||(42004937-42004998)
chr1 (204-267)||(48148049-48148112)
chr1 (180-263)||(15323124-15323206)
chr1 (221-293)||(36905998-36906072)
chr1 (223-270)||(52903252-52903299)
chr1 (220-266)||(398778-398824)
chr1 (186-260)||(2896140-2896213)
chr1 (228-270)||(10233261-10233303)
chr1 (228-270)||(12443469-12443511)
chr1 (228-270)||(13436466-13436508)
chr1 (220-270)||(17425102-17425152)
chr1 (220-270)||(17831540-17831590)
chr1 (220-270)||(20157359-20157409)
chr1 (220-266)||(21530689-21530735)
chr1 (221-267)||(28674801-28674847)
chr1 (220-270)||(32724107-32724157)
chr1 (228-266)||(34298444-34298482)
chr1 (228-270)||(35999331-35999373)
chr1 (220-270)||(38503320-38503370)
chr1 (228-302)||(9828052-9828128)
chr1 (228-286)||(10572580-10572640)
chr1 (230-267)||(20131987-20132024)
chr1 (228-302)||(32461439-32461514)
chr1 (234-267)||(45534202-45534235)
chr1 (228-298)||(47989505-47989577)
chr1 (220-268)||(5898277-5898325)
chr1 (176-264)||(16297298-16297385)
chr1 (170-214)||(18190164-18190208)
chr1 (228-264)||(22515902-22515938)
chr1 (228-264)||(22881631-22881667)
chr1 (237-302)||(25934633-25934700)
chr1 (219-270)||(29229460-29229512)
chr1 (228-264)||(31015051-31015087)
chr1 (228-264)||(37055871-37055907)
[»] chr4 (34 HSPs)
chr4 (220-270)||(22440609-22440659)
chr4 (222-269)||(903924-903971)
chr4 (192-267)||(21539879-21539953)
chr4 (220-270)||(5775367-5775417)
chr4 (230-270)||(13134460-13134500)
chr4 (220-266)||(8423731-8423777)
chr4 (220-270)||(11931280-11931330)
chr4 (228-270)||(36635332-36635374)
chr4 (220-270)||(40613450-40613500)
chr4 (220-270)||(40742591-40742641)
chr4 (228-268)||(7214533-7214573)
chr4 (238-270)||(10499279-10499311)
chr4 (231-270)||(17876166-17876205)
chr4 (222-302)||(30982853-30982935)
chr4 (220-300)||(38148702-38148784)
chr4 (234-302)||(46083966-46084036)
chr4 (228-270)||(999357-999399)
chr4 (225-267)||(3731208-3731250)
chr4 (228-262)||(17446079-17446113)
chr4 (240-299)||(19500836-19500897)
chr4 (228-270)||(33950144-33950186)
chr4 (218-268)||(40179647-40179697)
chr4 (220-270)||(48139264-48139314)
chr4 (228-282)||(49652969-49653023)
chr4 (200-265)||(2234231-2234295)
chr4 (227-264)||(6485626-6485663)
chr4 (221-270)||(16189710-16189759)
chr4 (233-270)||(17344513-17344550)
chr4 (240-302)||(22234865-22234929)
chr4 (227-264)||(27706192-27706229)
chr4 (225-270)||(44081586-44081631)
chr4 (220-293)||(7012066-7012141)
chr4 (229-269)||(9996849-9996889)
chr4 (230-270)||(18576046-18576086)
[»] chr5 (36 HSPs)
chr5 (220-302)||(3966503-3966587)
chr5 (220-302)||(18592073-18592157)
chr5 (220-270)||(27144463-27144513)
chr5 (220-302)||(11685939-11686022)
chr5 (221-270)||(36838544-36838593)
chr5 (219-271)||(24273038-24273090)
chr5 (219-271)||(24389124-24389176)
chr5 (228-268)||(35017045-35017085)
chr5 (219-270)||(6471898-6471949)
chr5 (234-302)||(21814275-21814345)
chr5 (220-270)||(7175028-7175078)
chr5 (228-270)||(16203804-16203846)
chr5 (176-270)||(23220940-23221033)
chr5 (220-266)||(28588687-28588733)
chr5 (220-269)||(2577190-2577239)
chr5 (228-302)||(21522758-21522834)
chr5 (228-302)||(21533324-21533400)
chr5 (221-270)||(30502397-30502446)
chr5 (221-270)||(30542740-30542789)
chr5 (230-270)||(14873527-14873567)
chr5 (234-270)||(39758286-39758322)
chr5 (234-302)||(6401512-6401582)
chr5 (228-267)||(12927662-12927701)
chr5 (219-266)||(23016002-23016049)
chr5 (223-266)||(30098329-30098372)
chr5 (228-270)||(23012417-23012459)
chr5 (225-267)||(28262408-28262450)
chr5 (220-283)||(38749557-38749622)
chr5 (228-270)||(41091266-41091308)
chr5 (218-267)||(17593734-17593783)
chr5 (228-264)||(14674277-14674313)
chr5 (230-270)||(18421850-18421890)
chr5 (226-270)||(19429438-19429482)
chr5 (228-264)||(19579709-19579745)
chr5 (176-264)||(21191071-21191158)
chr5 (228-264)||(33178033-33178069)
[»] scaffold1528 (1 HSPs)
scaffold1528 (220-297)||(1035-1114)
[»] scaffold0236 (1 HSPs)
scaffold0236 (218-266)||(25781-25829)
[»] scaffold0110 (1 HSPs)
scaffold0110 (220-281)||(28850-28913)
[»] scaffold0022 (2 HSPs)
scaffold0022 (220-270)||(99893-99943)
scaffold0022 (221-267)||(90844-90890)
[»] scaffold0044 (1 HSPs)
scaffold0044 (229-302)||(53189-53264)
[»] scaffold0027 (1 HSPs)
scaffold0027 (176-264)||(46639-46726)
[»] scaffold0024 (1 HSPs)
scaffold0024 (222-266)||(68255-68299)
[»] scaffold0008 (1 HSPs)
scaffold0008 (228-308)||(263341-263423)
[»] scaffold0697 (1 HSPs)
scaffold0697 (220-266)||(1644-1690)
[»] scaffold0168 (1 HSPs)
scaffold0168 (176-270)||(21000-21093)
[»] scaffold0036 (1 HSPs)
scaffold0036 (228-270)||(9756-9798)
[»] scaffold0020 (1 HSPs)
scaffold0020 (228-270)||(135321-135363)
[»] scaffold0003 (1 HSPs)
scaffold0003 (240-302)||(241614-241678)
[»] scaffold0136 (1 HSPs)
scaffold0136 (220-264)||(3864-3908)
[»] scaffold0018 (1 HSPs)
scaffold0018 (220-264)||(192264-192308)
[»] scaffold0011 (1 HSPs)
scaffold0011 (228-264)||(17764-17800)


Alignment Details
Target: chr2 (Bit Score: 324; Significance: 0; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 16 - 412
Target Start/End: Complemental strand, 2666151 - 2665755
Alignment:
Q  16 aaagaaacaagtgtagaacatgggatactaacttgagactttcaacattctattattatttacacaaaccaatccatgattgcgnnnnnnncttcatcag 115  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||    
T  2666151 aaagaaagaagtgtagaacatgggatactaacttgagactttcaacattctattattatttacacaaaccaatccatgattgcgtttttttcttcatcag 2666052  T
Q  116 gcacacaatcacactcacatatcacattaaaatattgtcttaatattttgttatgcatgtatacggacatggacatcggacacaacacagatactgacat 215  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  2666051 gcacacaatcaccctcacatatcatattaaaatattgtcttaatattttgttatgcatgtatacggatatggacatcggacacaacacagatagtgacat 2665952  T
Q  216 gtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacacgtgtttgataatgatgc 315  Q
    || | |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2665951 gtctaacaccactaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttgaacacaacacgtgtttgataatgatgc 2665852  T
Q  316 acgtctaatccgaaaagtgccgtacttggtagttatcgacatacaatgattattataaaactgtcaacatcaaaccctcgaacaagatgaatctgtg 412  Q
    ||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2665851 acgtctaatccgaaaagtgtcgtacttcgtagttatcgacgtacaatgattattataaaactgtcaacatcaaaccctcgaacaagatgaatctgtg 2665755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 219 - 302
Target Start/End: Original strand, 44860319 - 44860404
Alignment:
Q  219 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    |||||||| ||||||||| |||||||| ||||||| ||||||||||||||||  ||||| |||| |||||||||||| ||| ||||    
T  44860319 tgacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgacatgtgt 44860404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 234 - 298
Target Start/End: Complemental strand, 34785027 - 34784961
Alignment:
Q  234 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacac 298  Q
    |||||||||||||||||||||||||||||||||||||  ||||| |||||||| | |||||| ||||    
T  34785027 ttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacacgacac 34784961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 21616762 - 21616812
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  21616762 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 21616812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 223 - 269
Target Start/End: Original strand, 36281688 - 36281734
Alignment:
Q  223 accgttaataattttagaaaatcacataatttagtgtaattatatgt 269  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  36281688 accgttaataatttgagaaaatcacataatttagtgtaatcatatgt 36281734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 302
Target Start/End: Original strand, 2331795 - 2331876
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||| |||||||||| |||||||||||||||| |||||| |||| ||| ||||| ||||| |||| || |||| |||||||    
T  2331795 acaccattaataatttgagaaaatcacataattcagtgtatttatgtgtcggtgtcgtgtcagtgtcgggcacagcacgtgt 2331876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 30527653 - 30527604
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||||||||    
T  30527653 acactgttaataatttgagaaaatcatataatttagtgtaattatatgtg 30527604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 270
Target Start/End: Complemental strand, 20922973 - 20922937
Alignment:
Q  234 ttttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||||||||||||||||||||||||||||||||    
T  20922973 ttttagaaaatcacataatttagtgtaattatatgtg 20922937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 302
Target Start/End: Original strand, 28524447 - 28524510
Alignment:
Q  241 aaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||||||||| ||||||||||||||||  | |||||||| ||||| |||||||||||||||    
T  28524447 aaatcacataattcagtgtaattatatgtgtcgttgttgtgttggtgtcggacacaacacgtgt 28524510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 302
Target Start/End: Complemental strand, 22084890 - 22084805
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaa--ttatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    |||||||||||||||| ||||||||| |||||| |||||||  |||||||||  ||| | ||||| |||| |||||||||||||||    
T  22084890 acaccgttaataatttgagaaaatcatataattcagtgtaattttatatgtgccggtatcgtgtcagtgtcggacacaacacgtgt 22084805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 23718026 - 23718076
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||| ||||| |||||||||| ||||||||||||||||    
T  23718026 gacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtg 23718076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 24105698 - 24105748
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||| ||||| |||||||||| ||||||||||||||||    
T  24105698 gacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtg 24105748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 31808077 - 31808127
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||| | |||||||||||||| ||||||||||||||||    
T  31808077 gacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtg 31808127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 37411303 - 37411253
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||| |||||||||||||||| ||||| ||||||||||    
T  37411303 gacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtg 37411253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 303
Target Start/End: Original strand, 4207856 - 4207941
Alignment:
Q  219 tgacaccgttaataattttagaaaatcacataatttagtgtaattata-tgtgggtgttgtgtcggtgttggacacaacacgtgtt 303  Q
    |||||||  ||||||||| | |||| | |||||||||||||||||||| ||| ||| | |||||||||| |||||| |||||||||    
T  4207856 tgacaccactaataatttgaaaaaagcgcataatttagtgtaattatattgtcggtatcgtgtcggtgtcggacacgacacgtgtt 4207941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 28412351 - 28412404
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtg 274  Q
    |||||||||||||||| | |||||||||||||| ||||||||||| ||| ||||    
T  28412351 acaccgttaataatttgataaaatcacataattcagtgtaattatgtgtcggtg 28412404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 28677909 - 28677958
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 269  Q
    ||||||| ||||||||| | |||||||||||||| |||||||||||||||    
T  28677909 gacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 266
Target Start/End: Original strand, 31018591 - 31018636
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattata 266  Q
    |||||| ||||||||| |||||||||||| ||||||||||||||||    
T  31018591 acaccgctaataatttcagaaaatcacatgatttagtgtaattata 31018636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 35449514 - 35449563
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||| ||||||||||| ||||||||||| |||| ||||||||||||||||    
T  35449514 acactgttaataatttgagaaaatcacagaattcagtgtaattatatgtg 35449563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 39279676 - 39279725
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||||||||| | ||||||||| |||||| ||||||||||||||||    
T  39279676 acaccgttaataatatgagaaaatcaaataattcagtgtaattatatgtg 39279725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 267
Target Start/End: Complemental strand, 40361862 - 40361766
Alignment:
Q  170 gcatgtatacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatat 267  Q
    ||||| ||||||||| ||| | || |||| |||||||||| ||||  | ||||||  |||||||||| | ||||| ||||||||||||||||||||||    
T  40361862 gcatggatacggacacggataccgaacacgacacagatacggacac-tatgacactattaataatttgaaaaaattacataatttagtgtaattatat 40361766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 270
Target Start/End: Complemental strand, 20242772 - 20242736
Alignment:
Q  234 ttttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||||||||||||||| ||||||||||||||||    
T  20242772 ttttagaaaatcacataattcagtgtaattatatgtg 20242736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 19573978 - 19574029
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg 271  Q
    ||||||| ||||||||| ||||||| |||||||| |||||||||||| ||||    
T  19573978 gacaccgataataatttaagaaaataacataattcagtgtaattataggtgg 19574029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 23921256 - 23921299
Alignment:
Q  223 accgttaataattttagaaaatcacataatttagtgtaattata 266  Q
    |||||||||||||| ||||||| |||||||| ||||||||||||    
T  23921256 accgttaataatttgagaaaattacataattcagtgtaattata 23921299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 238 - 302
Target Start/End: Original strand, 35056886 - 35056952
Alignment:
Q  238 agaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    |||||| || |||||| ||||||||||||||||  ||||| |||||||||| |||||| ||||||||    
T  35056886 agaaaaccatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgt 35056952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 36409686 - 36409631
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgt 275  Q
    ||||||| | ||||||| | |||||||||||||||||||||||||| ||| |||||    
T  36409686 gacaccgctgataatttgaaaaaatcacataatttagtgtaattatgtgtcggtgt 36409631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 5367200 - 5367242
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  5367200 taataatttgaggaaatcacataattcagtgtaattatatgtg 5367242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 16069313 - 16069263
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||||||||||| | ||||||| |||||| ||||||||||| ||||    
T  16069313 gacaccgttaataatttaaaaaaatcatataattcagtgtaattatttgtg 16069263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 18276521 - 18276571
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||| |||||||||| ||||| ||||||||||| ||||    
T  18276521 gacaccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtg 18276571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 267
Target Start/End: Complemental strand, 35191633 - 35191591
Alignment:
Q  225 cgttaataattttagaaaatcacataatttagtgtaattatat 267  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||    
T  35191633 cgttgataatttgagaaaatcacataatttagggtaattatat 35191591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 21782869 - 21782832
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattat 265  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  21782869 taataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 30404909 - 30404865
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||| ||||||||||| | |||||||||||||| ||||||||||    
T  30404909 gacacggttaataatttgaaaaaatcacataattcagtgtaatta 30404865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 38355933 - 38355862
Alignment:
Q  233 attttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    |||| |||||||||||||||| ||||| ||||||||||  |||||  | | ||||||||| |||||||||||    
T  38355933 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtcatattggtgttggatacaacacgtgt 38355862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 219 - 302
Target Start/End: Complemental strand, 44585 - 44500
Alignment:
Q  219 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||||||||||  ||| | ||||||||||||||||||||||||||    
T  44585 tgacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacacaacacgtgt 44500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 290
Target Start/End: Original strand, 11803258 - 11803331
Alignment:
Q  219 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttgga 290  Q
    |||||| ||||||||||| |||||||||||||||| ||||||||||||||||  |||||||||| |||||||||    
T  11803258 tgacactgttaataatttaagaaaatcacataattcagtgtaattatatgtgttggtgttgtgttggtgttgga 11803331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 39954338 - 39954288
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  39954338 gacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtg 39954288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 4786397 - 4786347
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||||    
T  4786397 gacaccattaataatttaagaaaatcacataattcagtgtaattatatgtg 4786347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 7472602 - 7472524
Alignment:
Q  192 cggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||||||| || |||||||| || ||||||  ||||||||| |  ||||||||||| ||||||||||||||||||    
T  7472602 cggacacaacacggaaactgacatattcgacaccactaataatttaaagaaatcacataaattagtgtaattatatgtg 7472524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 14731720 - 14731762
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  14731720 taataatttgagaaaatcacataatttagtgtaattatatgtg 14731762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 34897085 - 34897135
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  34897085 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 34897135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 33405437 - 33405393
Alignment:
Q  226 gttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||    
T  33405437 gttaataatttgagaaaaacacataatttagtgtaattatatgtg 33405393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 302
Target Start/End: Complemental strand, 2572164 - 2572031
Alignment:
Q  170 gcatgtatacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattata--t 267  Q
    ||||| ||||||||| |||||  |||||| |||| ||||| |||| ||  |||||   ||||||||| | ||||||||||||||||||||||||| |  |    
T  2572164 gcatggatacggacacggacactggacacgacacggataccgacacgtc-gacacacctaataatttgaaaaaatcacataatttagtgtaattacaagt 2572066  T
Q  268 gtgggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    || ||||| ||||| |||| |||||| ||||||||    
T  2572065 gtcggtgtcgtgtctgtgtcggacacgacacgtgt 2572031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 11927145 - 11927095
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||| ||||||||||| | |||||||||||||| ||||||||||||||||    
T  11927145 gacactgttaataatttgataaaatcacataattcagtgtaattatatgtg 11927095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 13844647 - 13844605
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  13844647 taataatttgagaaaatcacataattgagtgtaattatatgtg 13844605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 299
Target Start/End: Complemental strand, 15816180 - 15816107
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacg 299  Q
    ||||||||| | |||||||||||||||||||||||||||  ||| ||||| |||| ||||| |||||| |||||    
T  15816180 taataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacg 15816107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 24362261 - 24362211
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||| ||| |||||||||||| ||||||||||||||||    
T  24362261 gacaccgctaataatttgagagaatcacataattcagtgtaattatatgtg 24362211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 4611534 - 4611583
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 269  Q
    ||||||| ||||||||| ||||||| |||||||| |||||||||||||||    
T  4611534 gacaccgctaataatttgagaaaataacataattcagtgtaattatatgt 4611583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 13018284 - 13018329
Alignment:
Q  223 accgttaataattttagaaaatcacataatttagtgtaattatatg 268  Q
    |||||||||||||| | ||||||||||||||||||||||| |||||    
T  13018284 accgttaataatttgacaaaatcacataatttagtgtaatgatatg 13018329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 20785523 - 20785474
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||| ||||||||| || ||||||||||||||| ||||||||||||||    
T  20785523 acaccgctaataatttgaggaaatcacataatttaatgtaattatatgtg 20785474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 297
Target Start/End: Original strand, 29776044 - 29776113
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaaca 297  Q
    ||||||||| |||||||||| ||||| ||| ||||||||||| ||||||  ||| |||| ||||||||||    
T  29776044 taataatttgagaaaatcacgtaattcagtataattatatgtcggtgttaagtcagtgtcggacacaaca 29776113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 12570569 - 12570517
Alignment:
Q  218 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| | ||||||||| |||||| ||||||||| ||||||||||||||||    
T  12570569 ttgacactgctaataatttaagaaaaacacataattaagtgtaattatatgtg 12570517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 24669406 - 24669477
Alignment:
Q  192 cggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||||| ||||||| ||||||| | | ||||||||||||||||| || |||| |||||||| ||||||||||    
T  24669406 cggacacgacacagacactgacacgct-gacaccgttaataatttgaggaaattacataattcagtgtaatta 24669477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 31580180 - 31580140
Alignment:
Q  226 gttaataattttagaaaatcacataatttagtgtaattata 266  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  31580180 gttaataatttaagaaaatcacataattgagtgtaattata 31580140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 267
Target Start/End: Original strand, 14134707 - 14134746
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatat 267  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  14134707 taataatttgagaaaatcacataattcagtgtaattatat 14134746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 3025559 - 3025597
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattata 266  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  3025559 taataatttgagaaaatcacataattcagtgtaattata 3025597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 4298985 - 4298901
Alignment:
Q  178 acggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||| ||||||| ||||||| ||||||||||| ||| |   ||||| ||||||||||| | |||||||||||||||| ||||||||    
T  4298985 acggatatggaca-cggacacgacacagatactaacacgcc-gacacagttaataatttgaaaaaatcacataatttaatgtaatta 4298901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 11944665 - 11944715
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||| ||||||||||| | |||||||||||| | ||||||||||||||||    
T  11944665 gacactgttaataatttgataaaatcacataactcagtgtaattatatgtg 11944715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 267
Target Start/End: Original strand, 24447034 - 24447076
Alignment:
Q  225 cgttaataattttagaaaatcacataatttagtgtaattatat 267  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||    
T  24447034 cgttgataatttgagaaaatcacataatttagggtaattatat 24447076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 27213555 - 27213597
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| |||||||||||||||| | ||||||||||||||    
T  27213555 taataatttcagaaaatcacataattcactgtaattatatgtg 27213597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 31236628 - 31236586
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| |||||||||||||||| | ||||||||||||||    
T  31236628 taataatttgagaaaatcacataattcaatgtaattatatgtg 31236586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 34222955 - 34222997
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| | |||||||||||||| ||||||||||||||||    
T  34222955 taataatttaataaaatcacataattaagtgtaattatatgtg 34222997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 267
Target Start/End: Complemental strand, 12570795 - 12570746
Alignment:
Q  218 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatat 267  Q
    ||||||||| ||||||||| |||||| | ||||||| |||||||||||||    
T  12570795 ttgacaccgctaataatttaagaaaaacgcataattaagtgtaattatat 12570746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 26529751 - 26529788
Alignment:
Q  230 ataattttagaaaatcacataatttagtgtaattatat 267  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  26529751 ataatttgagaaaatcacataatttagggtaattatat 26529788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 270
Target Start/End: Complemental strand, 26902217 - 26902184
Alignment:
Q  237 tagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||||||||||| ||||||||||||||||    
T  26902217 tagaaaatcacataattcagtgtaattatatgtg 26902184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 33382077 - 33382028
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||| ||||||||| ||||||| |||||||| || |||||||||||||    
T  33382077 acaccgataataatttaagaaaatgacataattcagagtaattatatgtg 33382028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 275
Target Start/End: Complemental strand, 37283867 - 37283814
Alignment:
Q  222 caccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgt 275  Q
    ||||| ||||||| | |||||||||||||||| ||||||||||| ||| |||||    
T  37283867 caccgctaataatctgagaaaatcacataattcagtgtaattatgtgtcggtgt 37283814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 8342980 - 8343016
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||||||| | |||||||||||||||||||||||||    
T  8342980 taataatttgaaaaaatcacataatttagtgtaatta 8343016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 8343324 - 8343360
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||||||| | |||||||||||||||||||||||||    
T  8343324 taataatttgaaaaaatcacataatttagtgtaatta 8343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 18067994 - 18067954
Alignment:
Q  219 tgacaccgttaataattttagaaaatcacataatttagtgt 259  Q
    |||||||| ||||||||| |||||||||||||||| |||||    
T  18067994 tgacaccgctaataatttgagaaaatcacataattcagtgt 18067954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 234 - 270
Target Start/End: Original strand, 18964191 - 18964227
Alignment:
Q  234 ttttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||||||||||||||| | ||||||||||||||    
T  18964191 ttttagaaaatcacataattcaatgtaattatatgtg 18964227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 202 - 266
Target Start/End: Complemental strand, 20679471 - 20679408
Alignment:
Q  202 acagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattata 266  Q
    ||||| ||||||||||  ||||||  ||||||||| ||||||||||||| || ||||||||||||    
T  20679471 acagacactgacatgtc-gacacccctaataatttgagaaaatcacatagttcagtgtaattata 20679408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 20873077 - 20873113
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||||||| | |||||||||||||||||||||||||    
T  20873077 taataatttgaaaaaatcacataatttagtgtaatta 20873113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 22493504 - 22493555
Alignment:
Q  230 ataattttagaaaatcacataatttagtgtaat--tatatgtgggtgttgtg 279  Q
    ||||||||| |||||||||||||| ||||||||  ||||||| |||||||||    
T  22493504 ataattttaaaaaatcacataattcagtgtaatcatatatgtcggtgttgtg 22493555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 32804599 - 32804549
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32804599 gacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtg 32804549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 49505210 - 49505163
Alignment:
Q  223 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||    
T  49505210 accgctaataatttgagaaaatcacataatttagtgtaattatatgtg 49505163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 11313851 - 11313809
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  11313851 taataatttgagaaaatcacataatttagtgtaattatatgtg 11313809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 16192809 - 16192759
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||||||||||| ||||||| |||||||| ||||||||||||||||    
T  16192809 gacaccgttaataatttgagaaaataacataattcagtgtaattatatgtg 16192759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 302
Target Start/End: Original strand, 25064909 - 25064991
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||| |||| |||| | |||||||||||||||||||||||||| ||| ||| | |||| ||||| |||||| ||||||||    
T  25064909 gacaccgctaatgatttgaaaaaatcacataatttagtgtaattatgtgttggtatcgtgttggtgtcggacacgacacgtgt 25064991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 302
Target Start/End: Original strand, 55212963 - 55213046
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||| |  ||| |||| ||||||||||| || ||||||||||||    
T  55212963 gacacagttaataattttaaaaaatcacataatttagtgcaattacaagtgtcggtg-tgtgtcggtgtcgggcacaacacgtgt 55213046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 15812871 - 15812799
Alignment:
Q  229 aataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacacgtg 301  Q
    |||||||| |||||||||||||| | ||||||||||||||  ||||| |||| ||||| |||||| |||||||    
T  15812871 aataatttgagaaaatcacataactcagtgtaattatatgccggtgtcgtgttggtgtcggacacgacacgtg 15812799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 287
Target Start/End: Original strand, 2731819 - 2731881
Alignment:
Q  227 ttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgtt 287  Q
    |||||| ||| |||||||||||||||| ||||||||||||||||   ||||||||||||||||    
T  2731819 ttaatactttaagaaaatcacataattaagtgtaattatatgtgtatgtgttgtgtcggtgtt 2731881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 11665952 - 11666034
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgtttgata 308  Q
    ||||||||| | ||||||||| |||||||||||||||||||||  ||||| |||| | |||| ||||| |||||||| |||||    
T  11665952 taataatttgataaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgttgatgttagacacgacacgtgtctgata 11666034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 4201397 - 4201443
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatat 267  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||    
T  4201397 acaccgttaataatttgaaaaaatcacataattaagtgtaattatat 4201443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 7928450 - 7928500
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||| | |||||||||||||| ||||||||||||||||    
T  7928450 gacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtg 7928500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 292
Target Start/End: Complemental strand, 8039893 - 8039820
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggaca 292  Q
    |||||| ||||||||| ||||||| | |||||| ||||||||||||||||  ||||| |||||||||| |||||    
T  8039893 acaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca 8039820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 326
Target Start/End: Complemental strand, 34307840 - 34307737
Alignment:
Q  219 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacacgtgtttgataatgatgcacg 318  Q
    |||||||| ||||||||| ||||||||||||| || ||||||||||||     |||| |||||||||| |||||| |||||| || |||| |||  ||||    
T  34307840 tgacaccgctaataatttgagaaaatcacatatttcagtgtaattata----agtgtcgtgtcggtgtcggacacgacacgtcttcgatactgagacacg 34307745  T
Q  319 tctaatcc 326  Q
     |||||||    
T  34307744 cctaatcc 34307737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 4987342 - 4987266
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||||| | |||||||||||||| |||||||||| |  ||| ||||  ||||||||||||||||| ||||||||    
T  4987342 taataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgt 4987266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 14209121 - 14209197
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||||||| |||||||||||||| |||||||||| |  |||  |||| |||||||||| |||||| ||||||||    
T  14209121 taataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgtgt 14209197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 266
Target Start/End: Complemental strand, 14840349 - 14840304
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattata 266  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||||    
T  14840349 acaccattaataatttcagaaaatcacataattcagtgtaattata 14840304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 302
Target Start/End: Complemental strand, 15796353 - 15796269
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||| ||||||||||| | ||||||| |||||| |||||||||| |  ||| ||||| |||| ||||| |||||||||||||||    
T  15796353 gacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacacaacacgtgt 15796269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 27277889 - 27277852
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattat 265  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  27277889 taataatttgagaaaatcacataatttagtgtaattat 27277852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 10268545 - 10268501
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||| ||||||||||| | |||||||||||||||||||||||||    
T  10268545 gacacagttaataatttgaaaaaatcacataatttagtgtaatta 10268501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 7614474 - 7614427
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 267  Q
    ||||| ||||||||||| |||||||||||||||| ||| |||||||||    
T  7614474 gacacagttaataatttaagaaaatcacataattcagtataattatat 7614427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 267
Target Start/End: Original strand, 8842330 - 8842376
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 267  Q
    ||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  8842330 gacaccgctaataatttt-gaaaatcacataatttggtgtaattatat 8842376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 10690321 - 10690274
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 267  Q
    ||||||| ||||||| | |||||||||||||||| |||||||||||||    
T  10690321 gacaccgctaataatctgagaaaatcacataattcagtgtaattatat 10690274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 11251986 - 11252033
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtgggtgt 275  Q
    ||||||||| |||||||||||||||| ||||||||||| ||| |||||    
T  11251986 taataatttgagaaaatcacataattcagtgtaattatgtgtcggtgt 11252033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 270
Target Start/End: Complemental strand, 15314924 - 15314885
Alignment:
Q  231 taattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  15314924 taatttgaaaaaatcacataatttagtgtaattatatgtg 15314885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 38731221 - 38731268
Alignment:
Q  223 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||| ||||||||||| |||||||||||||| |||||| |||||||||    
T  38731221 accgctaataattttaaaaaatcacataattcagtgtagttatatgtg 38731268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 298
Target Start/End: Complemental strand, 2620104 - 2620034
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacac 298  Q
    |||| |||| |||||||||||||||| ||||||| ||| ||| ||||| ||| ||||||| ||||| ||||    
T  2620104 taatcatttgagaaaatcacataattaagtgtaactatgtgttggtgtcgtggcggtgttagacacgacac 2620034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 8383257 - 8383303
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattata 266  Q
    ||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  8383257 gacaccgctaataatttgagaaaatcatataattcagtgtaattata 8383303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 25093502 - 25093552
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||| |||||| |||| ||||||||||| |||| ||||||||||||||||    
T  25093502 gacactgttaatgatttgagaaaatcacacaattcagtgtaattatatgtg 25093552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 263
Target Start/End: Original strand, 28098143 - 28098181
Alignment:
Q  225 cgttaataattttagaaaatcacataatttagtgtaatt 263  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  28098143 cgttgataattttagaaaatcacataatttagggtaatt 28098181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 48202320 - 48202278
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||    
T  48202320 taatagtttgagaaaatcacataatttaatgtaattatatgtg 48202278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 1509538 - 1509583
Alignment:
Q  219 tgacaccgttaataattttagaaaatcacataatttagtgtaatta 264  Q
    |||||| | ||||||||| | |||||||||||||||||||||||||    
T  1509538 tgacacagctaataatttgaaaaaatcacataatttagtgtaatta 1509583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 268
Target Start/End: Original strand, 9624640 - 9624689
Alignment:
Q  219 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatg 268  Q
    |||||| | ||||||||| |||||||||||||||| | ||||||||||||    
T  9624640 tgacactgctaataatttgagaaaatcacataattcaatgtaattatatg 9624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 11658820 - 11658865
Alignment:
Q  225 cgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||||||| |||||||| ||||||| ||||| ||||||||||    
T  11658820 cgttaataatttgagaaaatcgcataattcagtgtgattatatgtg 11658865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 12704015 - 12704056
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgt 269  Q
    ||||||||| |||||| ||||||||| |||||||||||||||    
T  12704015 taataatttgagaaaagcacataattcagtgtaattatatgt 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 17005670 - 17005594
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||||| | ||||||| |||||| ||||||||||||  ||| |||||||||| |||||  |||| |||||||||    
T  17005670 taataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgtgttggtgtcagacataacacgtgt 17005594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 8789599 - 8789559
Alignment:
Q  230 ataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||||||||||  |||||||||||||||    
T  8789599 ataatttgagaaaatcacataattccgtgtaattatatgtg 8789559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 268
Target Start/End: Complemental strand, 11493412 - 11493372
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatg 268  Q
    ||||||| | |||||||||||||||| ||||||||||||||    
T  11493412 taataatgtgagaaaatcacataattcagtgtaattatatg 11493372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 26508083 - 26508154
Alignment:
Q  192 cggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||||| | ||||||||||||| | | ||||| | ||||||||| | |||||||||||||| ||||||||||    
T  26508083 cggacacgatacagatactgacacgct-gacacagctaataatttgaaaaaatcacataattcagtgtaatta 26508154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 234 - 270
Target Start/End: Original strand, 35222952 - 35222988
Alignment:
Q  234 ttttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||||||||||||||| | ||||||||||||||    
T  35222952 ttttagaaaatcacataattcaatgtaattatatgtg 35222988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 55401083 - 55401119
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||||||| | |||||||||||||||||||||||||    
T  55401083 taataatttgaaaaaatcacataatttagtgtaatta 55401119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 192 - 298
Target Start/End: Original strand, 15902795 - 15902902
Alignment:
Q  192 cggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttgg 289  Q
    ||||||| ||||||| |||||||||   ||||||  ||||||||| | |||||||||||||||||||||||||||||||  |||||||||||||| | ||    
T  15902795 cggacacgacacagacactgacatgcc-gacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcggtatcgg 15902893  T
Q  290 acacaacac 298  Q
    |||| ||||    
T  15902894 acacgacac 15902902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 220 - 292
Target Start/End: Complemental strand, 29787428 - 29787356
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggaca 292  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||| ||| |||||  |||||||||||||||    
T  29787428 gacaccgctaataatttgagaaaatcacataattcagtgtaattatgtgttggtgtaatgtcggtgttggaca 29787356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 298
Target Start/End: Original strand, 32308120 - 32308200
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacac 298  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||| ||||||   |||| ||||||||||||||||| ||||    
T  32308120 gacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgacac 32308200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 27093472 - 27093424
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 268  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  27093472 gacaccgctaataatttaagaaaatcacataatttagtgtaattatatg 27093424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 27184829 - 27184877
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 268  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  27184829 gacaccgctaataatttaagaaaatcacataatttagtgtaattatatg 27184877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 8160415 - 8160466
Alignment:
Q  219 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  8160415 tgacaccgctaataatttaagaaaattacataatttagtgtaattatatgtg 8160466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 11700802 - 11700877
Alignment:
Q  219 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacaca 294  Q
    |||||||||||||||||| | |||||||||||||| | ||||||||| |||  ||||||| ||||||| |||||||    
T  11700802 tgacaccgttaataatttgacaaaatcacataattcaatgtaattatgtgtctgtgttgtctcggtgtcggacaca 11700877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 17851434 - 17851481
Alignment:
Q  223 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||    
T  17851434 accgctaataattttagaaaatcacataattcagtgtaattatatgtg 17851481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 1433454 - 1433504
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||||||||    
T  1433454 gacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtg 1433504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 2948683 - 2948733
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| | |||||||||||||||||| ||||||||||||||||||||||    
T  2948683 gacaccgctgataattttagaaaatcacgtaatttagtgtaattatatgtg 2948733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 5233635 - 5233692
Alignment:
Q  226 gttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtc 281  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||  |||||||||||    
T  5233635 gttaataatttgagaaaatcacataatctagtgtaattatatgtgttggtgttgtgtc 5233692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 267
Target Start/End: Original strand, 5235953 - 5236033
Alignment:
Q  186 ggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatat 267  Q
    |||||| |||||| ||||||| ||||||| ||  ||||||| ||||||||| ||||||| | ||||||||||||||||||||    
T  5235953 ggacattggacacgacacagacactgacacgtc-gacaccgctaataatttaagaaaattatataatttagtgtaattatat 5236033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 270
Target Start/End: Complemental strand, 18213078 - 18213042
Alignment:
Q  234 ttttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||||||||||||||||||||||||||||||||    
T  18213078 ttttagaaaatcacataatttagtgtaattatatgtg 18213042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 27732300 - 27732248
Alignment:
Q  218 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||| |||||||||||| ||||||| |||||||| ||||||||||||||||    
T  27732300 ttgacaacgttaataatttaagaaaattacataattcagtgtaattatatgtg 27732248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 3721101 - 3721143
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| |||||||||||||||||||| ||||||||||||    
T  3721101 taataatttgagaaaatcacataatttagtataattatatgtg 3721143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 7328742 - 7328700
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| ||||||| |||||||||||||||||||||||||    
T  7328742 taataatttgagaaaataacataatttagtgtaattatatgtg 7328700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 16341504 - 16341546
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  16341504 taataatttgagaaaatcacataattaagtgtaattatatgtg 16341546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 20549791 - 20549841
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||| |||||||||| ||||| ||||||||||||||||    
T  20549791 gacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtg 20549841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 22602769 - 22602719
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||| ||| |||| |||||||||||||||| ||||||||||||||||    
T  22602769 gacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtg 22602719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 33384641 - 33384591
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||||||||| | ||||||||  |||||||||||||||||||||||    
T  33384641 gacaccgttaataatctgagaaaatcctataatttagtgtaattatatgtg 33384591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 304
Target Start/End: Original strand, 49088810 - 49088892
Alignment:
Q  220 gacaccgttaataattttagaaaatcac--ataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacacgtgttt 304  Q
    ||||||||||||||||| | ||||||||  |||||||||| ||||||||||||    | |||| ||||||| |||||||||||||||    
T  49088810 gacaccgttaataatttaaaaaaatcacgtataatttagtataattatatgtg----tcgtgttggtgttgaacacaacacgtgttt 49088892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 2425818 - 2425742
Alignment:
Q  193 ggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||| ||||||||||||||| |   | ||||||||||||||| |||||||||||||||| |||| || ||||||||    
T  2425818 ggacacgacacagatactgacacgccgg-caccgttaataatttgagaaaatcacataattaagtggaactatatgtg 2425742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 302
Target Start/End: Complemental strand, 26329441 - 26329357
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    |||| |||||||||||| |||||| |||| |||| ||||||||||||||||  || || ||||||||||  ||||| ||||||||    
T  26329441 gacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtcgtgtcggtgtcagacacgacacgtgt 26329357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 301
Target Start/End: Complemental strand, 6630963 - 6630888
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtg 301  Q
    ||||||||| ||||| |||| ||||| ||||||||||||||||  | ||| |||| ||||| ||||||||||||||    
T  6630963 taataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggacacaacacgtg 6630888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 42720951 - 42720899
Alignment:
Q  218 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| ||||||||| | |||||||||||||| | ||||||||||||||    
T  42720951 ttgacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtg 42720899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 24339650 - 24339724
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgt 300  Q
    ||||||||| | |||||||||||||| |||||||||| |  ||| ||||| |||||||||| |||||| ||||||    
T  24339650 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgt 24339724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 227 - 270
Target Start/End: Original strand, 38143230 - 38143273
Alignment:
Q  227 ttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||||| | |||||||||||||||| ||||||||||||||    
T  38143230 ttaataatttgaaaaaatcacataatttaatgtaattatatgtg 38143273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 5548676 - 5548726
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| | ||||||| ||||||||| |||||| ||||||||||||||||    
T  5548676 gacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtg 5548726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 12278843 - 12278885
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||    
T  12278843 taataatttaagaaaatgacataattcagtgtaattatatgtg 12278885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 19206050 - 19206100
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||| |||||||||||||||| | | ||||||||||||    
T  19206050 gacaccgctaataatttgagaaaatcacataattcattataattatatgtg 19206100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 22484025 - 22484075
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| |||||||||||||||||  ||||||| ||| ||||||||||||    
T  22484025 gacaccgctaataattttagaaaattgcataattcagtataattatatgtg 22484075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 22868050 - 22868092
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| | |||||||||||||||| ||||||||||||||||    
T  22868050 taataatatgagaaaatcacataattcagtgtaattatatgtg 22868092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 24146824 - 24146866
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||||||||||||||||||||| | | ||||||||||||    
T  24146824 taataattttagaaaatcacataattcaatataattatatgtg 24146866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 286
Target Start/End: Original strand, 30731037 - 30731103
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgt 286  Q
    |||||||  |||||||| |||||||||||||||| ||||||||| | ||| ||||| |||| |||||    
T  30731037 gacaccgcgaataatttgagaaaatcacataattcagtgtaattgtgtgtcggtgtcgtgttggtgt 30731103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 265
Target Start/End: Original strand, 2424622 - 2424659
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattat 265  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  2424622 taataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 9408386 - 9408349
Alignment:
Q  227 ttaataattttagaaaatcacataatttagtgtaatta 264  Q
    |||||||||| | |||||||||||||||||||||||||    
T  9408386 ttaataatttgaaaaaatcacataatttagtgtaatta 9408349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 23191896 - 23191945
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 269  Q
    ||||||| ||||||||| ||||||||||||| || |||||||||| ||||    
T  23191896 gacaccgctaataatttgagaaaatcacatatttcagtgtaattacatgt 23191945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 35493423 - 35493460
Alignment:
Q  230 ataattttagaaaatcacataatttagtgtaattatat 267  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  35493423 ataatttgagaaaatcacataatttagggtaattatat 35493460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 267
Target Start/End: Original strand, 39138458 - 39138491
Alignment:
Q  234 ttttagaaaatcacataatttagtgtaattatat 267  Q
    |||||||||||||||||||| |||||||||||||    
T  39138458 ttttagaaaatcacataattcagtgtaattatat 39138491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 9482944 - 9482984
Alignment:
Q  230 ataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||||| |||| ||||||||||||||||    
T  9482944 ataatttgagaaaatcacacaattcagtgtaattatatgtg 9482984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 10377507 - 10377555
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 268  Q
    ||||| ||||||||| | ||||||||| |||||| ||||||||||||||    
T  10377507 gacactgttaataatataagaaaatcatataattcagtgtaattatatg 10377555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 240 - 268
Target Start/End: Original strand, 41020516 - 41020544
Alignment:
Q  240 aaaatcacataatttagtgtaattatatg 268  Q
    |||||||||||||||||||||||||||||    
T  41020516 aaaatcacataatttagtgtaattatatg 41020544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 200 - 302
Target Start/End: Complemental strand, 25038149 - 25038046
Alignment:
Q  200 acacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaatt--atatgtgggtgttgtgtcggtgttggacacaaca 297  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||| ||||||||||||||||||  | |||| ||| |||||| |||||  ||||| |||    
T  25038149 acacagatactgacacgtt-gacaccgttaataatttgagaaaattacataatttagtgtaattacaaatgtcggtattgtgttggtgtccgacacgaca 25038051  T
Q  298 cgtgt 302  Q
    |||||    
T  25038050 cgtgt 25038046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 5732569 - 5732519
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  5732569 gacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtg 5732519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 302
Target Start/End: Original strand, 16766648 - 16766781
Alignment:
Q  170 gcatgtatacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattata--t 267  Q
    ||||| ||||||||| ||||| ||||||| |||  || ||||||| |   ||||| | ||||||||| | |||||||||||||| |||||||||| |  |    
T  16766648 gcatggatacggacacggacaccggacacgacatggacactgacacgcc-gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagt 16766746  T
Q  268 gtgggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    || ||||| |||||||||| |||||||||||||||    
T  16766747 gtcggtgtcgtgtcggtgtcggacacaacacgtgt 16766781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 7086803 - 7086845
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  7086803 taataatttgagaaaatcacataatttagtgtaattatatgtg 7086845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 19040352 - 19040402
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  19040352 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 19040402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 264
Target Start/End: Original strand, 25096378 - 25096467
Alignment:
Q  174 gtatacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||||||||| |||||||||| |||||||||| || |||| |   ||||||  ||||||||| ||||||||||||||| |||||||||||    
T  25096378 gtatacggacacggacatcggatacaacacagacaccgacacgac-gacaccactaataatttgagaaaatcacataatctagtgtaatta 25096467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 31579283 - 31579229
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgt 275  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| ||| |||||    
T  31579283 acaccgttaataatttgagaaaatcacataattcagtgtaattatgtgtcggtgt 31579229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 298
Target Start/End: Complemental strand, 5970167 - 5970087
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaatt--atatgtgggtgttgtgtcggtgttggacacaacac 298  Q
    ||||| ||||||||||| | |||||||||||||| |||||||||  | |||||||||| |||||||||| |||||| ||||    
T  5970167 gacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacac 5970087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 7265651 - 7265602
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  7265651 acaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 7265602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 8805623 - 8805570
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtc 281  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||| |||||    
T  8805623 taataatttgagaaaatcacataatttagtgtaattatgtgtcggtgtagtgtc 8805570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 5462685 - 5462733
Alignment:
Q  219 tgacaccgttaataattttagaaaatcacataatttagtgtaattatat 267  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||    
T  5462685 tgacaccgttaataatttgagaaaatcacataattcattgtaattatat 5462733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 267
Target Start/End: Original strand, 9658879 - 9658926
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 267  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||||    
T  9658879 gacaccgctaataatttaagaaaatcacataattcagtgtaattatat 9658926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 16488635 - 16488565
Alignment:
Q  234 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||||||||||| |||  ||||||||||||||||  ||||| |||||||||| |||||| ||||||||    
T  16488635 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgt 16488565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 266
Target Start/End: Complemental strand, 32511726 - 32511679
Alignment:
Q  219 tgacaccgttaataattttagaaaatcacataatttagtgtaattata 266  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  32511726 tgacaccgctaataatttaagaaaatcacataattcagtgtaattata 32511679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 9025545 - 9025503
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  9025545 taataatttgagaaaatcacataattcagtgtaattatatgtg 9025503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 9195805 - 9195763
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| ||||||| |||||||||||||||||||||||||    
T  9195805 taataatttgagaaaatgacataatttagtgtaattatatgtg 9195763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 10842532 - 10842582
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||| | ||||||||||||||||||||||| |||||||    
T  10842532 gacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtg 10842582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 10889033 - 10888983
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||| | |||||||||||||||||||| ||||||||||    
T  10889033 gacaccgctaataatttgataaaatcacataatttagtgtgattatatgtg 10888983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 17302355 - 17302397
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| ||||||||||||||||| |||||||||||||||    
T  17302355 taataatttaagaaaatcacataattttgtgtaattatatgtg 17302397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 17341723 - 17341677
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattata 266  Q
    ||||||||||||||||| | |||||||||||||| ||||||||||||    
T  17341723 gacaccgttaataatttgataaaatcacataattcagtgtaattata 17341677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 7248366 - 7248442
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||| | || ||||||||||||| || |||||||||||||  || || ||||||||||||||||||||| ||||    
T  7248366 taataatctgaggaaatcacataattcagggtaattatatgtgttggagtcgtgtcggtgttggacacaacatgtgt 7248442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 30866202 - 30866153
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||| ||||||||| |||||||||||||||| | ||||||||||||||    
T  30866202 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtg 30866153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 32298665 - 32298616
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||| ||||||||| |||  ||||||||||||||||||||||||||||    
T  32298665 acaccgctaataatttaagatcatcacataatttagtgtaattatatgtg 32298616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 306
Target Start/End: Complemental strand, 4118386 - 4118304
Alignment:
Q  226 gttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgtttga 306  Q
    ||||||||||| | |||||||||||||| | |||||||| |  ||| ||| ||||||| |||| |||||||| ||||||||||    
T  4118386 gttaataatttgaaaaaatcacataattaaatgtaattacaagtgttggttttgtgtcagtgtcggacacaatacgtgtttga 4118304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 9617437 - 9617484
Alignment:
Q  223 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||| ||||||||| |||||||||||||||| | ||||||||||||||    
T  9617437 accggtaataatttgagaaaatcacataattcaatgtaattatatgtg 9617484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 270
Target Start/End: Original strand, 13851696 - 13851786
Alignment:
Q  179 cggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||| |||||| | |||| |||| || ||||||| ||  ||||||| ||||||||| ||||||| || ||||| ||||||||||||||||    
T  13851696 cggacacggacattgaacacgacacggacactgacacgtc-gacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtg 13851786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 271
Target Start/End: Original strand, 1532241 - 1532291
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg 271  Q
    |||||| ||||||||| | ||||| |||||||| |||||||||||||||||    
T  1532241 acaccgctaataatttgataaaattacataattcagtgtaattatatgtgg 1532291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 7151420 - 7151462
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| | |||||||||||||| ||||||||||||||||    
T  7151420 taataatttgaaaaaatcacataattaagtgtaattatatgtg 7151462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 7377979 - 7378029
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||| ||||| |||||||||||||||| | ||||||||||||||    
T  7377979 gacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtg 7378029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 298
Target Start/End: Original strand, 8713979 - 8714060
Alignment:
Q  220 gacaccgttaataattttagaaaa-tcacataatttagtgtaatt--atatgtgggtgttgtgtcggtgttggacacaacac 298  Q
    ||||| ||||||||||| | |||| |||||||||| |||||||||  | |||||||||| |||||||||| |||||| ||||    
T  8713979 gacacagttaataatttgaaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacac 8714060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 9027178 - 9027228
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||| ||| ||||||||||||  |||||||||||||||    
T  9027178 gacaccgctaataatttgagataatcacataattccgtgtaattatatgtg 9027228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 9629383 - 9629433
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||  |||||||| |||||||||||||||| | ||||||||||||||    
T  9629383 gacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtg 9629433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 11591917 - 11591879
Alignment:
Q  232 aattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtg 11591879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 269
Target Start/End: Complemental strand, 13360420 - 13360382
Alignment:
Q  231 taattttagaaaatcacataatttagtgtaattatatgt 269  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  13360420 taatttgagaaaatcacataattcagtgtaattatatgt 13360382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 342
Target Start/End: Original strand, 17435207 - 17435324
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgtttgataatgatgcacgtctaatc 325  Q
    ||||||||||| ||||| |||||||| |||||||||| |  |||  ||||| ||||| ||| |||||| ||||||||| || | ||   |||||||||||    
T  17435207 taataattttaaaaaattacataattcagtgtaattacaagtgttagtgttttgtcgatgtcggacacgacacgtgttcgacactgggacacgtctaatc 17435306  T
Q  326 cgaaaagtg-ccgtactt 342  Q
     |||||||| ||||||||    
T  17435307 tgaaaagtgtccgtactt 17435324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 24832596 - 24832638
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| ||||||||  |||||||||||||||||||||||    
T  24832596 taataatttgagaaaatcttataatttagtgtaattatatgtg 24832638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 26178732 - 26178690
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| | ||||||||||||||||||||||| |||||||    
T  26178732 taataatttgataaaatcacataatttagtgtaatcatatgtg 26178690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 26562701 - 26562739
Alignment:
Q  232 aattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  26562701 aatttgagaaaatcacataattcagtgtaattatatgtg 26562739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 267
Target Start/End: Complemental strand, 32248979 - 32248937
Alignment:
Q  225 cgttaataattttagaaaatcacataatttagtgtaattatat 267  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||    
T  32248979 cgttgataattttaaaaaatcacataatttagggtaattatat 32248937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 32320729 - 32320679
Alignment:
Q  219 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 269  Q
    |||||||||||||||||| | |||||||||||||| | ||| |||||||||    
T  32320729 tgacaccgttaataatttgataaaatcacataattcaatgtcattatatgt 32320679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 34447416 - 34447374
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaatt 263  Q
    |||||||||||||||| | ||||||| ||||||||||||||||    
T  34447416 acaccgttaataatttgataaaatcatataatttagtgtaatt 34447374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 266
Target Start/End: Original strand, 7625084 - 7625168
Alignment:
Q  181 gacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattata 266  Q
    |||| ||||||||||||| ||||||| || |||| | | ||||| | ||||||||| ||||||| | |||||||||| ||||||||    
T  7625084 gacacggacatcggacacgacacagacaccgacacg-tcgacacggataataatttgagaaaatgatataatttagtataattata 7625168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 286
Target Start/End: Original strand, 9522899 - 9522959
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgt 286  Q
    ||||||||| | |||||||||||||| |||||||||| |  ||| ||||||||||||||||    
T  9522899 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgttgtgtcggtgt 9522959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 302
Target Start/End: Original strand, 10294064 - 10294191
Alignment:
Q  176 atacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggt 273  Q
    ||||||||| | ||| ||||||| |||| ||||||||||||   || |||| ||||||||| ||| |||| |||| || | ||||||||||||||  |||    
T  10294064 atacggacacgaacaccggacacgacacggatactgacatg-ccgataccgctaataatttgagataatcgcatatttcaatgtaattatatgtgtcggt 10294162  T
Q  274 gttgtgtcggtgttggacacaacacgtgt 302  Q
    || |||| ||||| |||||| ||| ||||    
T  10294163 gtcgtgttggtgtcggacacgacatgtgt 10294191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 24833284 - 24833243
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgt 269  Q
    |||||| || |||||||| |||||||||||||||||||||||    
T  24833284 taataagttaagaaaatcgcataatttagtgtaattatatgt 24833243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 34073398 - 34073338
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatat--gtgggtgttgtgtcggtgt 286  Q
    ||||||||| |||||||| ||||||| |||||||||||||  || ||||| ||||||||||    
T  34073398 taataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgtcggtgt 34073338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 677837 - 677885
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 268  Q
    ||||| ||||||||||| ||||||||| ||||| ||||||| |||||||    
T  677837 gacactgttaataatttgagaaaatcatataatatagtgtatttatatg 677885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 268
Target Start/End: Complemental strand, 7996429 - 7996389
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatg 268  Q
    ||||||||| ||||||||| |||||| ||||||||||||||    
T  7996429 taataatttgagaaaatcatataattcagtgtaattatatg 7996389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 8022372 - 8022412
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatg 268  Q
    ||||||||| ||||||||| |||||| ||||||||||||||    
T  8022372 taataatttgagaaaatcatataattcagtgtaattatatg 8022412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 14721239 - 14721291
Alignment:
Q  218 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||| |||||||||| ||||||| |||||||| | | ||||||||||||    
T  14721239 ttgacaccattaataatttaagaaaattacataattcactataattatatgtg 14721291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 17327696 - 17327664
Alignment:
Q  238 agaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||||||||||||||||||| ||||||||    
T  17327696 agaaaatcacataatttagtgtaactatatgtg 17327664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 17841640 - 17841604
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||||||| | |||||||||||||||||||||||||    
T  17841640 taataatttgaaaaaatcacataatttagtgtaatta 17841604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 21885790 - 21885842
Alignment:
Q  218 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| ||||||||| | ||||| |||||||||| | ||||||||||||    
T  21885790 ttgacaccgataataatttaaaaaaataacataatttaatctaattatatgtg 21885842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 12713378 - 12713302
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatg--tgggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||||| |||||||||||||||||||||||||||||||  | |||||| ||||||||| | |||||||||||||    
T  12713378 taataatttaagaaaatcacataatttagtgtaattatatgtattggtgttatgtcggtgtcgtacacaacacgtgt 12713302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 12717469 - 12717393
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatg--tgggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||||| |||||||||||||||||||||||||||||||  | |||||| ||||||||| | |||||||||||||    
T  12717469 taataatttaagaaaatcacataatttagtgtaattatatgtattggtgttatgtcggtgtcgtacacaacacgtgt 12717393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 39953205 - 39953155
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  39953205 gacaccgctaataattttagaaaatcacataatttagtgtaattgtatgtg 39953155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 34257969 - 34257922
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatat 267  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||    
T  34257969 gacaccgttaataatttaataaaatcacataatttagtgtaattatat 34257922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 298
Target Start/End: Original strand, 44482240 - 44482310
Alignment:
Q  230 ataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacac 298  Q
    ||||||| |||||||||||||||| ||||||||||||||||  ||||| |||||||||| |||||| ||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacac 44482310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 1864939 - 1864889
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||||||    
T  1864939 gacacagttaataatttgagaaaatcacataattcagtgtaattatatgtg 1864889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 9709777 - 9709870
Alignment:
Q  176 atacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||| |||||||||||| ||||| |||| || |||||||||  | |||||| ||||||||| ||||||||||||||||   ||||||||||||||    
T  9709777 atacagacatggacatcagacacgacacggacactgacatgcct-acaccgctaataatttgagaaaatcacataattcgttgtaattatatgtg 9709870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 7918308 - 7918220
Alignment:
Q  181 gacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||||| ||||||| ||||||| | ||||| | | |||| |  ||||||||| |||||||||||||||| ||||||||||||||||    
T  7918308 gacatggacaccggacacgacacagacaatgacacgct-gacatcactaataatttgagaaaatcacataattcagtgtaattatatgtg 7918220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 12707924 - 12707848
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatg--tgggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||||| ||||||||| ||||||||||| |||||||||  | |||||| ||||||||| | |||||||||||||    
T  12707924 taataatttaagaaaatcatataatttagtgcaattatatgtattggtgttatgtcggtgtcgtacacaacacgtgt 12707848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 14332693 - 14332652
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgt 269  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  14332693 taataatttgagaaaatcacataatttagtgtaattatatgt 14332652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 25272479 - 25272528
Alignment:
Q  217 tttgacaccgttaataattttagaaaatcacataatttagtgtaattata 266  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  25272479 tttgacacagttaacaatttgagaaaatcacataatttagtgtaattata 25272528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 17754311 - 17754390
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg--gtgttgtgtcggtgttggacacaaca 297  Q
    ||||||| ||||||||| | ||||| |||||||| ||||||| ||||||||   |||| |||||||||||||||||||||    
T  17754311 gacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaaca 17754390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 39130819 - 39130776
Alignment:
Q  227 ttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||||||||||||| | |||||||||||||||||||||||    
T  39130819 ttaataattttagaaaattatataatttagtgtaattatatgtg 39130776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 2784556 - 2784606
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||||| ||||| |||||||||||||||| ||| ||||||||||||    
T  2784556 gacaccgttaaaaatttaagaaaatcacataattgagtataattatatgtg 2784606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 13997883 - 13997933
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||||||| |||| | |||||||||||||| ||||||||||||||||    
T  13997883 gacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtg 13997933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 25098614 - 25098564
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| | ||||||| |||||||||||||||| ||||||||||||||||    
T  25098614 gacaccgctgataatttgagaaaatcacataattcagtgtaattatatgtg 25098564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 293
Target Start/End: Original strand, 25361896 - 25361961
Alignment:
Q  230 ataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacac 293  Q
    ||||||| |||||||||||||||| ||||||||||||||||   |||| |||||||||| ||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacac 25361961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 302
Target Start/End: Complemental strand, 26238171 - 26238091
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||| ||||||||| ||||||| |||||||| |||||||| |||||||   || |||||||||| |||||||||||||||    
T  26238171 gacaccgctaataatttgagaaaataacataattcagtgtaat-atatgtgtcagt-gtgtcggtgtcggacacaacacgtgt 26238091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 302
Target Start/End: Original strand, 34371713 - 34371797
Alignment:
Q  219 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    |||||||| ||||||||  |||||||||||||||| ||||||||||||||||  ||||| |||| ||||| ||| || ||||||||    
T  34371713 tgacaccgctaataattg-agaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcggatacgacacgtgt 34371797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 34712434 - 34712392
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| ||||||| |||||||||||||||||||||||||    
T  34712434 taataatttgagaaaataacataatttagtgtaattatatgtg 34712392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 36878461 - 36878507
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattata 266  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  36878461 gacaccgctaataatttgagaaaatcacataattcagtgtaattata 36878507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 6427351 - 6427400
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||| ||||||||| |||||||||||||||| | ||||||||||||||    
T  6427351 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtg 6427400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 16164366 - 16164290
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||||| | |||||||||||||||| ||||||||||||||    ||| |||| |||||||||| ||||||||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattatatgtgtcattgtcgtgttggtgttggacgcaacacgtgt 16164290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 40181879 - 40181920
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgt 269  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  40181879 taataatttgagaaaatcacataattcagtgtaattatatgt 40181920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 1486817 - 1486722
Alignment:
Q  170 gcatgtatacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattata 266  Q
    ||||| ||||||||| ||| | |||| || |||| |||||||||| | | ||||| | ||||||||| | |||||||||||||| ||||||||||||    
T  1486817 gcatggatacggacacggataccggatacgacacggatactgacacgct-gacacagctaataatttgaaaaaatcacataattcagtgtaattata 1486722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 19324572 - 19324612
Alignment:
Q  230 ataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  19324572 ataatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 270
Target Start/End: Original strand, 30749854 - 30749890
Alignment:
Q  234 ttttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||||||||||||||| ||||||||||||||||    
T  30749854 ttttagaaaatcacataattcagtgtaattatatgtg 30749890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 270
Target Start/End: Original strand, 30771305 - 30771341
Alignment:
Q  234 ttttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||||||||||||||| ||||||||||||||||    
T  30771305 ttttagaaaatcacataattcagtgtaattatatgtg 30771341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 41877529 - 41877485
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||    
T  41877529 gacaccgctaataatttgagaaaattacataatttagtgtaatta 41877485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 293
Target Start/End: Complemental strand, 42004998 - 42004937
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcggtgttggacac 293  Q
    ||||||||| ||||||| ||||||||||||||||| |||    |||||||||||||||| ||||||    
T  42004998 taataatttgagaaaatgacataatttagtgtaatcata----ggtgttgtgtcggtgtcggacac 42004937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 267
Target Start/End: Complemental strand, 48148112 - 48148049
Alignment:
Q  204 agatactgacatgtttgacaccgttaataattttagaaaa-tcacataatttagtgtaattatat 267  Q
    ||||||||||||||| ||||||| ||||||||||| |||| ||| |||||| |||||||||||||    
T  48148112 agatactgacatgtt-gacaccgctaataattttaaaaaaatcatataattcagtgtaattatat 48148049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 263
Target Start/End: Original strand, 15323124 - 15323206
Alignment:
Q  180 ggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaatt 263  Q
    ||||| ||||| ||||||| |||  || ||||||||||  || || ||||||||||| | ||||||||||||||||||||||||    
T  15323124 ggacacggacaccggacacgacatggacactgacatgtc-gatacagttaataatttgaaaaaatcacataatttagtgtaatt 15323206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 221 - 293
Target Start/End: Original strand, 36905998 - 36906072
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacac 293  Q
    |||||| ||||||| | |||||||||||||||| || |||||||||||||  || |||||||| |||| ||||||    
T  36905998 acaccgctaataatctgagaaaatcacataattcagagtaattatatgtgttggcgttgtgtcagtgtcggacac 36906072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 52903252 - 52903299
Alignment:
Q  223 accgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||||||||| | ||||||| |||||| ||||||||||||||||    
T  52903252 accgttaataatttaataaaatcatataattcagtgtaattatatgtg 52903299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 398824 - 398778
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattata 266  Q
    ||||||| ||||||||| | |||||||||||||| ||||||||||||    
T  398824 gacaccgctaataatttgaaaaaatcacataattcagtgtaattata 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 260
Target Start/End: Complemental strand, 2896213 - 2896140
Alignment:
Q  186 ggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgta 260  Q
    ||||| |||||||||||| || ||||||| |   ||||||| ||||||||| |||||||||||||||| ||||||    
T  2896213 ggacaacggacacaacacggacactgacacgcc-gacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 10233261 - 10233303
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||| || |||||||||||||||| ||||||||||||||||    
T  10233261 taataaattgagaaaatcacataattcagtgtaattatatgtg 10233303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 12443511 - 12443469
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||    
T  12443511 taataatttgagaaaatcacataattcagtgtaattgtatgtg 12443469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 13436466 - 13436508
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  13436466 taataatttaaggaaatcacataattcagtgtaattatatgtg 13436508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 17425152 - 17425102
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||| | |||||||||||||| | ||||||||||||||    
T  17425152 gacaccgataataatttgataaaatcacataattcaatgtaattatatgtg 17425102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 17831590 - 17831540
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||| |||||||||||| ||| |||||||| |||||||    
T  17831590 gacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtg 17831540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 20157409 - 20157359
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||| | |||||||||||||||| |||||||| |||||||    
T  20157409 gacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtg 20157359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 21530689 - 21530735
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattata 266  Q
    ||||||||||||||||| ||||||||| ||||||| || ||||||||    
T  21530689 gacaccgttaataatttgagaaaatcatataatttggtataattata 21530735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 28674801 - 28674847
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatat 267  Q
    |||||||||||||||| ||||||| |||||||| ||| |||||||||    
T  28674801 acaccgttaataatttgagaaaattacataattcagtataattatat 28674847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 32724157 - 32724107
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||| |||||||||||| ||||| | |||||||||| ||||||||||||||    
T  32724157 gacatcgttaataatttgagaaatttacataatttaatgtaattatatgtg 32724107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 34298444 - 34298482
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattata 266  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  34298444 taataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 35999373 - 35999331
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||    
T  35999373 taataatttaagaaaatcatataatttagtataattatatgtg 35999331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 38503320 - 38503370
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||| ||||||||| ||| || ||||||||||||||||    
T  38503320 gacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtg 38503370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 9828052 - 9828128
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||||| | |||||||||||||| ||||||||| ||||||  ||||| ||||| ||||  ||||| ||||||||    
T  9828052 taataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgt 9828128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 10572640 - 10572580
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgt 286  Q
    ||||||||| ||||||||||||||||  ||||||||| |||||  |||||||||| |||||    
T  10572640 taataatttgagaaaatcacataattcggtgtaattaaatgtgtcggtgttgtgttggtgt 10572580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 20132024 - 20131987
Alignment:
Q  230 ataattttagaaaatcacataatttagtgtaattatat 267  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  20132024 ataatttgagaaaatcacataatttagggtaattatat 20131987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 32461514 - 32461439
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||||| | |||||||||||||||| |||||||| |  ||| |||| ||||||||||| |||||| ||||||||    
T  32461514 taataatttgaaaaaatcacataatttaatgtaattacaagtgttggtg-tgtgtcggtgtcggacacgacacgtgt 32461439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 267
Target Start/End: Complemental strand, 45534235 - 45534202
Alignment:
Q  234 ttttagaaaatcacataatttagtgtaattatat 267  Q
    |||||||||||||||||||||||||||| |||||    
T  45534235 ttttagaaaatcacataatttagtgtaagtatat 45534202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 298
Target Start/End: Original strand, 47989505 - 47989577
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacac 298  Q
    ||||||||| | |||||||||||||| |||||||||| |  ||| ||||| |||||||||| |||||| ||||    
T  47989505 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacac 47989577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 5898325 - 5898277
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatg 268  Q
    ||||||| ||||||| | | |||||||||||||| ||||||||||||||    
T  5898325 gacaccgctaataatctgaaaaaatcacataattcagtgtaattatatg 5898277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 264
Target Start/End: Complemental strand, 16297385 - 16297298
Alignment:
Q  176 atacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||||||||||||||||||||| | || |||||||||| | | ||||| |  |||||| | | ||||||||| |||| ||||||||||    
T  16297385 atacggacatggacatcggacacgatacggatactgacacg-tcgacacagcaaataatatgaaaaaatcacaaaattcagtgtaatta 16297298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 18190208 - 18190164
Alignment:
Q  170 gcatgtatacggacatggacatcggacacaacacagatactgaca 214  Q
    ||||| ||||||||||||||| ||||||| |||| ||||||||||    
T  18190208 gcatggatacggacatggacaccggacacgacacggatactgaca 18190164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 22515938 - 22515902
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||||||| | |||||||||||||||||||||||||    
T  22515938 taataatttgaaaaaatcacataatttagtgtaatta 22515902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 22881667 - 22881631
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||||||| | |||||||||||||||||||||||||    
T  22881667 taataatttgaaaaaatcacataatttagtgtaatta 22881631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 302
Target Start/End: Original strand, 25934633 - 25934700
Alignment:
Q  237 tagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    |||||||||||| |||  ||||||||||||||||  ||| | |||||||||| |||||| ||||||||    
T  25934633 tagaaaatcacaaaatacagtgtaattatatgtgtcggtatcgtgtcggtgtcggacacgacacgtgt 25934700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 29229460 - 29229512
Alignment:
Q  219 tgacaccgttaataattttagaaaatcacataatttagt-gtaattatatgtg 270  Q
    |||||| | ||||||||| |||||||||||| ||||||| |||||||||||||    
T  29229460 tgacactgctaataatttgagaaaatcacatgatttagtggtaattatatgtg 29229512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 31015051 - 31015087
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  31015051 taataatttgagaaaatcacataattcagtgtaatta 31015087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 37055907 - 37055871
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  37055907 taataatttgagaaaattacataatttagtgtaatta 37055871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 22440659 - 22440609
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  22440659 gacaccgttaataatttgagaaaatcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 903924 - 903971
Alignment:
Q  222 caccgttaataattttagaaaatcacataatttagtgtaattatatgt 269  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||    
T  903924 caccgttaataatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 21539953 - 21539879
Alignment:
Q  192 cggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatat 267  Q
    ||||||||||| ||| |||||||||   |||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  21539953 cggacacaacatagacactgacatgcc-gacaccattaataatttaagaaaatcatataatttagtgtaattatat 21539879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 5775417 - 5775367
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||||    
T  5775417 gacaccattaataatttgagaaaatcacataattaagtgtaattatatgtg 5775367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 13134460 - 13134500
Alignment:
Q  230 ataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  13134460 ataatttaagaaaatcacataatttagtgtaattatatgtg 13134500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 8423777 - 8423731
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattata 266  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  8423777 gacaccgctaataatttgagaaaatcacataattcagtgtaattata 8423731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 11931280 - 11931330
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||||||||| | | |||||||||||||||||||||| ||||||||    
T  11931280 gacaccgttaataatatgaaaaaatcacataatttagtgtaaatatatgtg 11931330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 36635332 - 36635374
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  36635332 taataatttgagaaaatcacataattcagtgtaattatatgtg 36635374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 40613450 - 40613500
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||| ||| |||||||||||||||| ||||||||||||||||    
T  40613450 gacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtg 40613500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 40742591 - 40742641
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||| |||||||||| ||||||||| ||||| |||||||||||||||||    
T  40742591 gacaccattaataatttgagaaaatcatataatctagtgtaattatatgtg 40742641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 268
Target Start/End: Complemental strand, 7214573 - 7214533
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatg 268  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  7214573 taataatttgagaaaatcacataatttaatgtaattatatg 7214533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 10499311 - 10499279
Alignment:
Q  238 agaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||||||||||||||||||||||||||||    
T  10499311 agaaaatcacataatttagtgtaattatatgtg 10499279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 270
Target Start/End: Original strand, 17876166 - 17876205
Alignment:
Q  231 taattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  17876166 taattttagaaaatgacataatttagtgtaatcatatgtg 17876205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 30982935 - 30982853
Alignment:
Q  222 caccgttaataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||| |||| |||| ||||||||||||| || ||||||||||||  ||| ||||| ||||||||||  ||||| ||||||||    
T  30982935 caccgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgt 30982853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 300
Target Start/End: Complemental strand, 38148784 - 38148702
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaa--ttatatgtgggtgttgtgtcggtgttggacacaacacgt 300  Q
    ||||||| ||||| ||| |||||||||||||||| |||||||  ||| |||| | ||| |||| |||||||||||| ||||||    
T  38148784 gacaccgctaatagtttgagaaaatcacataattcagtgtaattttaaatgtcgatgtcgtgttggtgttggacacgacacgt 38148702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 46084036 - 46083966
Alignment:
Q  234 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    |||||| |||||||||||| |||||||||||||||||  ||||| ||||| || | |||||| ||||||||    
T  46084036 ttttagtaaatcacataatctagtgtaattatatgtgtcggtgtcgtgtcagtatcggacacgacacgtgt 46083966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 999399 - 999357
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| || |||||| |||||||||||||||||||||||    
T  999399 taataatttgagtaaatcatataatttagtgtaattatatgtg 999357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 267
Target Start/End: Original strand, 3731208 - 3731250
Alignment:
Q  225 cgttaataattttagaaaatcacataatttagtgtaattatat 267  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||    
T  3731208 cgttgataatttgagaaaatcacataatttagggtaattatat 3731250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 262
Target Start/End: Original strand, 17446079 - 17446113
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaat 262  Q
    ||||||||| |||||||||||||||||||||||||    
T  17446079 taataatttaagaaaatcacataatttagtgtaat 17446113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 299
Target Start/End: Complemental strand, 19500897 - 19500836
Alignment:
Q  240 aaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacg 299  Q
    |||| |||||| |||||||||||||||||||  ||||| |||||||||| |||||| |||||    
T  19500897 aaaaacacatattttagtgtaattatatgtgatggtgtcgtgtcggtgtcggacacgacacg 19500836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 33950144 - 33950186
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| |||||||||||||||||| |||||| |||||||    
T  33950144 taataatttgagaaaatcacataatttaatgtaatcatatgtg 33950186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 40179697 - 40179647
Alignment:
Q  218 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatatg 268  Q
    |||||||| |||||| ||| | |||||||||||||| ||||||||||||||    
T  40179697 ttgacaccattaatagtttgaaaaaatcacataattcagtgtaattatatg 40179647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 48139264 - 48139314
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  48139264 gacactgttaataatttgagataatctcataatttaatgtaattatatgtg 48139314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 49653023 - 49652969
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtgggtgttgtgtcg 282  Q
    ||||||||| ||||||||| |||||| ||| ||||||||||| ||||| ||||||    
T  49653023 taataatttaagaaaatcagataattcagtataattatatgttggtgtcgtgtcg 49652969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 265
Target Start/End: Original strand, 2234231 - 2234295
Alignment:
Q  200 acacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattat 265  Q
    ||||||||||||||| | | | ||||||| ||||||| |||||||||||||||| | |||||||||    
T  2234231 acacagatactgacacgct-gtcaccgttgataatttgagaaaatcacataattcaatgtaattat 2234295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 6485663 - 6485626
Alignment:
Q  227 ttaataattttagaaaatcacataatttagtgtaatta 264  Q
    |||||||||| | |||||||||||||||||||||||||    
T  6485663 ttaataatttgaaaaaatcacataatttagtgtaatta 6485626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 16189710 - 16189759
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||| ||| ||||| |||||||||||||||| ||||||||||| ||||    
T  16189710 acaccgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtg 16189759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 270
Target Start/End: Original strand, 17344513 - 17344550
Alignment:
Q  233 attttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  17344513 atttaagaaaatcacataatttaatgtaattatatgtg 17344550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 302
Target Start/End: Complemental strand, 22234929 - 22234865
Alignment:
Q  240 aaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    |||||||||||||| ||||||||| ||||||  ||||| ||||||||||  ||||| ||||||||    
T  22234929 aaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacacgtgt 22234865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 27706229 - 27706192
Alignment:
Q  227 ttaataattttagaaaatcacataatttagtgtaatta 264  Q
    |||||||||| | |||||||||||||||||||||||||    
T  27706229 ttaataatttaaaaaaatcacataatttagtgtaatta 27706192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 44081631 - 44081586
Alignment:
Q  225 cgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||||||| | ||||||| |||||||| ||||||||||||||    
T  44081631 cgttaataatttgaaaaaatcatataatttaatgtaattatatgtg 44081586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 7012066 - 7012141
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacac 293  Q
    ||||||| ||||||||| ||||||| |||||||| ||||| || ||| ||   |||||||||||||||| ||||||    
T  7012066 gacaccgataataatttgagaaaatgacataattcagtgtgatcataggtatcggtgttgtgtcggtgtcggacac 7012141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 9996849 - 9996889
Alignment:
Q  229 aataattttagaaaatcacataatttagtgtaattatatgt 269  Q
    |||||||| |||||||||||||||| ||| |||||||||||    
T  9996849 aataatttgagaaaatcacataattcagtataattatatgt 9996889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 18576086 - 18576046
Alignment:
Q  230 ataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||||||||||  |||||||||||||||    
T  18576086 ataatttgagaaaatcacataattcggtgtaattatatgtg 18576046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 302
Target Start/End: Original strand, 3966503 - 3966587
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||||||||||||  ||||| ||||| |||| |||||||||| ||||    
T  3966503 gacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacaacatgtgt 3966587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 302
Target Start/End: Original strand, 18592073 - 18592157
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||| ||||| ||| ||||||| |||||||| | ||||||||||||||  ||||| |||||||||| |||||||||||||||    
T  18592073 gacaccgctaatattttaagaaaattacataattcaatgtaattatatgtgccggtgtcgtgtcggtgtcggacacaacacgtgt 18592157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 27144463 - 27144513
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||||||||    
T  27144463 gacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtg 27144513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 302
Target Start/End: Original strand, 11685939 - 11686022
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||| ||||||||| ||||| || ||||||||||||||||||||||||  ||||| || ||||||| |||||| ||||||||    
T  11685939 gacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggacacgacacgtgt 11686022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 36838544 - 36838593
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgtaattatatgtg 36838593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 24273090 - 24273038
Alignment:
Q  219 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg 271  Q
    |||||| |||| |||||| |||||||||||||||| |||||||||||||||||    
T  24273090 tgacacagttattaatttgagaaaatcacataattcagtgtaattatatgtgg 24273038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 24389124 - 24389176
Alignment:
Q  219 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg 271  Q
    |||||| |||| |||||| |||||||||||||||| |||||||||||||||||    
T  24389124 tgacacagttattaatttgagaaaatcacataattcagtgtaattatatgtgg 24389176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 35017045 - 35017085
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatg 268  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  35017045 taataatttgagaaaatcacataatttagtgtaattatatg 35017085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 6471949 - 6471898
Alignment:
Q  219 tgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||| | ||||||||| |||||||||||||||| ||||||||||||||||    
T  6471949 tgacacggctaataatttgagaaaatcacataattcagtgtaattatatgtg 6471898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 21814275 - 21814345
Alignment:
Q  234 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||||||||||| |||  ||||||||||||||||  ||||| |||||||||| |||||| ||||||||    
T  21814275 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgt 21814345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 7175078 - 7175028
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||||||||||| ||||||||||||||||| |  ||||||||||||    
T  7175078 gacaccgttaataatttgagaaaatcacataatttggcataattatatgtg 7175028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 16203846 - 16203804
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| |||||||| ||||||||||||||||||||||||    
T  16203846 taataatttgagaaaatctcataatttagtgtaattatatgtg 16203804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 23220940 - 23221033
Alignment:
Q  176 atacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||| |||||||| ||||||||  ||| | || |||||||||  ||||||| ||||||||| | |||||||||||||||||||| || |||||||    
T  23220940 atactgacatggatatcggacatgacatatatgctgacatgtc-gacaccgctaataatttgataaaatcacataatttagtgttatcatatgtg 23221033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 28588733 - 28588687
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattata 266  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  28588733 gacaccggtaataatttgagaaaatcacataattcagtgtaattata 28588687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 2577239 - 2577190
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgt 269  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||| ||||||    
T  2577239 gacaccgataataatttgagaaaatgacataatttagtgtaatcatatgt 2577190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 21522758 - 21522834
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||||||| ||||| |||||||| |||||||||| |  ||| ||||| |||||||||| |||||| ||||||||    
T  21522758 taataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgt 21522834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 21533324 - 21533400
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||||||| ||||| |||||||| |||||||||| |  ||| ||||| |||||||||| |||||| ||||||||    
T  21533324 taataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgt 21533400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 30502446 - 30502397
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||| ||||||||| |||||||||| ||||| ||||||||||||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtg 30502397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 30542789 - 30542740
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||| ||||||||| |||||||||| ||||| ||||||||||||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtg 30542740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 14873527 - 14873567
Alignment:
Q  230 ataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| |||||| ||||||||||||||||||||||||||    
T  14873527 ataatttgagaaaagcacataatttagtgtaattatatgtg 14873567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 270
Target Start/End: Original strand, 39758286 - 39758322
Alignment:
Q  234 ttttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||||||||||||||||||| ||||||||||||||||    
T  39758286 ttttagaaaatcacataattcagtgtaattatatgtg 39758322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 6401512 - 6401582
Alignment:
Q  234 ttttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||||||||||| |||  ||||||||||||||||  ||||| ||||| |||| |||||| ||||||||    
T  6401512 ttttagaaaatcacaaaatacagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacgacacgtgt 6401582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 267
Target Start/End: Original strand, 12927662 - 12927701
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatat 267  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  12927662 taataatttgagaaaatcatataatttagtgtaattatat 12927701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 266
Target Start/End: Complemental strand, 23016049 - 23016002
Alignment:
Q  219 tgacaccgttaataattttagaaaatcacataatttagtgtaattata 266  Q
    ||||| ||||||| |||| |||||||||||||||| ||||||||||||    
T  23016049 tgacatcgttaatcatttgagaaaatcacataattcagtgtaattata 23016002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 30098329 - 30098372
Alignment:
Q  223 accgttaataattttagaaaatcacataatttagtgtaattata 266  Q
    |||||||||||||| |||||||||||||||| | ||||||||||    
T  30098329 accgttaataatttgagaaaatcacataattcaatgtaattata 30098372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 23012459 - 23012417
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||    
T  23012459 taataatttgagaaaatcatataatttaatgtaattatatgtg 23012417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 267
Target Start/End: Complemental strand, 28262450 - 28262408
Alignment:
Q  225 cgttaataattttagaaaatcacataatttagtgtaattatat 267  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||    
T  28262450 cgttgataatttgagaaaatcacataatttagggtaattatat 28262408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 283
Target Start/End: Complemental strand, 38749622 - 38749557
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcgg 283  Q
    ||||||| ||||||||| | ||||| |||||||| | ||||||||||||||  |||||||||||||    
T  38749622 gacaccgataataatttgaaaaaatgacataattcaatgtaattatatgtgttggtgttgtgtcgg 38749557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 41091308 - 41091266
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    |||| |||| |||||||||||||||| ||||||||||||||||    
T  41091308 taatgatttgagaaaatcacataattcagtgtaattatatgtg 41091266  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 267
Target Start/End: Complemental strand, 17593783 - 17593734
Alignment:
Q  218 ttgacaccgttaataattttagaaaatcacataatttagtgtaattatat 267  Q
    |||| |||| ||||||||| |||||||||| ||||| |||||||||||||    
T  17593783 ttgaaaccgctaataatttgagaaaatcacgtaattcagtgtaattatat 17593734  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 14674277 - 14674313
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||||||| | |||||||||||||||||||||||||    
T  14674277 taataatttgaaaaaatcacataatttagtgtaatta 14674313  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 18421890 - 18421850
Alignment:
Q  230 ataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| |||||||||||||||  ||||||||||||||||    
T  18421890 ataatttgagaaaatcacataatccagtgtaattatatgtg 18421850  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 19429438 - 19429482
Alignment:
Q  226 gttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||||| |||||||||||||| ||||||||| ||| ||||    
T  19429438 gttaataatttgagaaaatcacataacttagtgtaaatatctgtg 19429482  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 19579709 - 19579745
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  19579709 taataatttgagaaaatcacataatttagtgcaatta 19579745  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 264
Target Start/End: Complemental strand, 21191158 - 21191071
Alignment:
Q  176 atacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaatta 264  Q
    |||||||||  |||| ||||||| |||| || |||||||||   ||||| | ||||||||| | |||||||||||||| ||||||||||    
T  21191158 atacggacactgacaccggacacgacacggacactgacatgcc-gacacagctaataatttgaaaaaatcacataattcagtgtaatta 21191071  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 33178033 - 33178069
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||||||| | |||||||||||||||||||||||||    
T  33178033 taataatttaaaaaaatcacataatttagtgtaatta 33178069  T

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Target: scaffold1528 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 1035 - 1114
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtgg--gtgttgtgtcggtgttggacacaaca 297  Q
    ||||||| ||||||||| | ||||| |||||||| ||||||| ||||||||   |||| |||||||||||||||||||||    
T  1035 gacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaaca 1114  T

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Target: scaffold0236 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 25829 - 25781
Alignment:
Q  218 ttgacaccgttaataattttagaaaatcacataatttagtgtaattata 266  Q
    ||||||| ||||||||||  |||||||||||||||||||||||||||||    
T  25829 ttgacacggttaataattagagaaaatcacataatttagtgtaattata 25781  T

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Target: scaffold0110 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 28850 - 28913
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtc 281  Q
    ||||||||||||||||| |||||||| ||||||| | ||||||||||||||  |||||||||||    
T  28850 gacaccgttaataatttaagaaaatcgcataattcaatgtaattatatgtgtcggtgttgtgtc 28913  T

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Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 99893 - 99943
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||| ||||||||||||||||| |||||||| | ||||||||||||||    
T  99893 gacaccgataataattttagaaaataacataattcaatgtaattatatgtg 99943  T

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Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 90844 - 90890
Alignment:
Q  221 acaccgttaataattttagaaaatcacataatttagtgtaattatat 267  Q
    ||||| |||||||||| ||||||||| |||||| |||||||||||||    
T  90844 acaccattaataatttgagaaaatcatataattcagtgtaattatat 90890  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 302
Target Start/End: Original strand, 53189 - 53264
Alignment:
Q  229 aataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    |||||||| |||||||||||||||| ||||||||||||  ||| ||||  |||||||||| |||||  ||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgt 53264  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 264
Target Start/End: Original strand, 46639 - 46726
Alignment:
Q  176 atacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||||||| ||||||||||||| |||| || | ||||| |   ||||| ||||||||||| | |||||||||||||| ||||||||||    
T  46639 atacggacacggacatcggacacgacacggacaatgacacgcc-gacacagttaataatttgaaaaaatcacataattcagtgtaatta 46726  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 68299 - 68255
Alignment:
Q  222 caccgttaataattttagaaaatcacataatttagtgtaattata 266  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||||    
T  68299 caccgttaataatttgagaaaatcatataatttagtataattata 68255  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 308
Target Start/End: Complemental strand, 263423 - 263341
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattata--tgtgggtgttgtgtcggtgttggacacaacacgtgtttgata 308  Q
    ||||||||| |||||| ||||||||| ||||||||||||  |||  |||| ||||||||||  ||||| ||||||||| ||||    
T  263423 taataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacgacacgtgttcgata 263341  T

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Target: scaffold0697 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 1644 - 1690
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaattata 266  Q
    ||||||||||||||||| ||||||||| ||||||| || ||||||||    
T  1644 gacaccgttaataatttgagaaaatcatataatttggtataattata 1690  T

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Target: scaffold0168 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 21000 - 21093
Alignment:
Q  176 atacggacatggacatcggacacaacacagatactgacatgtttgacaccgttaataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||| ||| ||||| | ||||| |||| || ||||||||| | ||||| ||||||||||| |||||||||||||| |  || ||||||||||||    
T  21000 atacgaacacggacaccagacacgacacggacactgacatgct-gacacggttaataatttgagaaaatcacataagtcggtataattatatgtg 21093  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 9798 - 9756
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||    
T  9798 taataatttgagaaaatcacttaattcagtgtaattatatgtg 9756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 135363 - 135321
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaattatatgtg 270  Q
    ||||||||| ||||||||||||||||  |||||||||||||||    
T  135363 taataatttgagaaaatcacataattctgtgtaattatatgtg 135321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 302
Target Start/End: Original strand, 241614 - 241678
Alignment:
Q  240 aaaatcacataatttagtgtaattat--atgtgggtgttgtgtcggtgttggacacaacacgtgt 302  Q
    ||||||||||||||||||||||||||   ||| ||||| |||| ||||| |||||| ||||||||    
T  241614 aaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgacacgtgt 241678  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 3908 - 3864
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||| ||||||||||| | |||||||||||||| ||||||||||    
T  3908 gacacggttaataatttaaaaaaatcacataattcagtgtaatta 3864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 192308 - 192264
Alignment:
Q  220 gacaccgttaataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||||||||||||||| ||||||| ||||||||  |||||||||    
T  192308 gacaccgttaataatttgagaaaattacataattcggtgtaatta 192264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 17800 - 17764
Alignment:
Q  228 taataattttagaaaatcacataatttagtgtaatta 264  Q
    ||||||||| | |||||||||||||||||||||||||    
T  17800 taataatttgaaaaaatcacataatttagtgtaatta 17764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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