View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6184_low_36 (Length: 232)

Name: NF6184_low_36
Description: NF6184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6184_low_36
NF6184_low_36
[»] chr5 (58 HSPs)
chr5 (1-189)||(14980007-14980194)
chr5 (17-181)||(43257832-43257998)
chr5 (1-188)||(166605-166803)
chr5 (1-188)||(36660426-36660622)
chr5 (1-188)||(31889741-31889916)
chr5 (3-188)||(4011618-4011790)
chr5 (1-100)||(4967447-4967546)
chr5 (3-188)||(7388150-7388335)
chr5 (5-188)||(31557300-31557489)
chr5 (1-188)||(34919752-34919932)
chr5 (5-132)||(12167570-12167700)
chr5 (1-181)||(36783361-36783552)
chr5 (1-181)||(15400177-15400369)
chr5 (17-185)||(16886087-16886250)
chr5 (57-188)||(42329556-42329700)
chr5 (16-188)||(39059805-39059987)
chr5 (17-188)||(4751502-4751685)
chr5 (120-189)||(793692-793761)
chr5 (17-188)||(4742238-4742421)
chr5 (17-181)||(33693746-33693911)
chr5 (28-188)||(27810345-27810517)
chr5 (120-188)||(13066712-13066780)
chr5 (120-188)||(29653600-29653668)
chr5 (120-188)||(4371362-4371430)
chr5 (120-188)||(38982231-38982299)
chr5 (57-188)||(34171163-34171304)
chr5 (1-110)||(27652275-27652384)
chr5 (123-188)||(33585064-33585129)
chr5 (120-188)||(4833719-4833787)
chr5 (57-184)||(33822513-33822653)
chr5 (21-110)||(8961011-8961099)
chr5 (120-188)||(12992063-12992129)
chr5 (124-185)||(32690821-32690882)
chr5 (121-188)||(33741464-33741531)
chr5 (126-185)||(41845374-41845433)
chr5 (120-189)||(32963095-32963162)
chr5 (5-102)||(1513075-1513172)
chr5 (120-181)||(28640088-28640149)
chr5 (120-188)||(17674207-17674275)
chr5 (144-188)||(27658682-27658726)
chr5 (57-102)||(793616-793661)
chr5 (125-188)||(36296225-36296286)
chr5 (138-188)||(7731697-7731747)
chr5 (3-57)||(24436498-24436552)
chr5 (36-110)||(33584964-33585038)
chr5 (140-185)||(8961117-8961162)
chr5 (58-107)||(29044811-29044860)
chr5 (57-109)||(36296144-36296196)
chr5 (145-188)||(12167693-12167736)
chr5 (141-188)||(28316712-28316759)
chr5 (142-181)||(29051620-29051659)
chr5 (159-189)||(24436585-24436615)
chr5 (68-102)||(38982168-38982202)
chr5 (5-57)||(4371491-4371543)
chr5 (17-77)||(8755591-8755651)
chr5 (17-69)||(17674329-17674381)
chr5 (59-95)||(29653526-29653562)
chr5 (68-104)||(41566878-41566914)
[»] chr3 (72 HSPs)
chr3 (1-188)||(26965464-26965653)
chr3 (17-187)||(27483165-27483337)
chr3 (3-188)||(2567970-2568157)
chr3 (3-188)||(37225553-37225749)
chr3 (5-189)||(19552538-19552725)
chr3 (1-189)||(34059874-34060062)
chr3 (17-188)||(25061703-25061874)
chr3 (5-189)||(36771536-36771722)
chr3 (3-181)||(1340887-1341067)
chr3 (1-188)||(44648366-44648555)
chr3 (1-214)||(647548-647771)
chr3 (5-189)||(790094-790265)
chr3 (5-180)||(40048900-40049067)
chr3 (5-188)||(46362970-46363165)
chr3 (5-187)||(53716029-53716196)
chr3 (5-187)||(38457460-38457653)
chr3 (3-183)||(35239390-35239556)
chr3 (17-188)||(83295-83476)
chr3 (1-181)||(31290930-31291111)
chr3 (1-189)||(43580473-43580676)
chr3 (3-188)||(44854314-44854508)
chr3 (36-188)||(54933194-54933359)
chr3 (17-110)||(2662464-2662557)
chr3 (1-96)||(38165617-38165712)
chr3 (70-189)||(43599855-43599976)
chr3 (120-188)||(2988696-2988763)
chr3 (57-185)||(44645340-44645481)
chr3 (21-181)||(41287082-41287255)
chr3 (17-181)||(42740238-42740403)
chr3 (17-167)||(9167661-9167810)
chr3 (5-181)||(45095559-45095723)
chr3 (5-110)||(5244673-5244777)
chr3 (36-185)||(25722450-25722612)
chr3 (120-189)||(32303991-32304060)
chr3 (123-188)||(43169333-43169398)
chr3 (1-188)||(54261414-54261614)
chr3 (123-188)||(22730924-22730989)
chr3 (36-188)||(43687872-43688040)
chr3 (17-98)||(43736842-43736922)
chr3 (1-188)||(20512450-20512651)
chr3 (57-188)||(51381720-51381867)
chr3 (17-181)||(4476334-4476498)
chr3 (138-189)||(13485909-13485960)
chr3 (36-188)||(27027732-27027899)
chr3 (5-110)||(27039415-27039519)
chr3 (121-186)||(35099453-35099518)
chr3 (123-188)||(36310339-36310404)
chr3 (57-110)||(53560754-53560807)
chr3 (5-189)||(4391902-4392088)
chr3 (3-185)||(22414757-22414948)
chr3 (7-185)||(43600152-43600341)
chr3 (68-188)||(3000751-3000883)
chr3 (120-185)||(36541493-36541558)
chr3 (123-187)||(42857148-42857212)
chr3 (120-183)||(52222831-52222892)
chr3 (3-90)||(22731040-22731126)
chr3 (125-188)||(49470788-49470851)
chr3 (138-180)||(15514830-15514872)
chr3 (126-175)||(38165733-38165783)
chr3 (126-188)||(52202383-52202445)
chr3 (57-102)||(2988620-2988665)
chr3 (57-110)||(43169424-43169477)
chr3 (124-188)||(50420258-50420321)
chr3 (125-189)||(53560663-53560726)
chr3 (120-189)||(5244584-5244652)
chr3 (57-102)||(42007072-42007117)
chr3 (126-185)||(42791330-42791388)
chr3 (17-68)||(43599520-43599571)
chr3 (68-102)||(16240672-16240706)
chr3 (72-105)||(15514752-15514785)
chr3 (57-102)||(32303915-32303960)
chr3 (57-110)||(36541581-36541634)
[»] chr4 (66 HSPs)
chr4 (3-188)||(52732594-52732782)
chr4 (5-189)||(43421087-43421273)
chr4 (2-164)||(34360033-34360197)
chr4 (17-188)||(15501129-15501302)
chr4 (1-189)||(21045150-21045326)
chr4 (5-189)||(51930594-51930765)
chr4 (1-188)||(32140945-32141119)
chr4 (5-181)||(54512034-54512212)
chr4 (5-188)||(44855237-44855433)
chr4 (7-188)||(50072276-50072438)
chr4 (1-188)||(36805409-36805600)
chr4 (17-188)||(37445655-37445837)
chr4 (5-189)||(31817162-31817332)
chr4 (5-188)||(19849079-19849273)
chr4 (3-181)||(45520419-45520607)
chr4 (4-188)||(39671068-39671238)
chr4 (1-99)||(56422958-56423056)
chr4 (36-188)||(24259606-24259771)
chr4 (3-189)||(30022062-30022258)
chr4 (17-188)||(22212336-22212518)
chr4 (57-188)||(31941553-31941697)
chr4 (119-188)||(6462004-6462073)
chr4 (17-110)||(34096100-34096193)
chr4 (1-188)||(56556238-56556410)
chr4 (68-181)||(31987306-31987430)
chr4 (121-185)||(28116243-28116307)
chr4 (33-188)||(35928486-35928650)
chr4 (123-188)||(19282501-19282567)
chr4 (59-188)||(17499732-17499874)
chr4 (120-188)||(29840070-29840139)
chr4 (17-102)||(42672481-42672566)
chr4 (57-189)||(47321138-47321284)
chr4 (1-189)||(34124289-34124490)
chr4 (3-185)||(45903377-45903559)
chr4 (120-188)||(51434346-51434414)
chr4 (3-185)||(11835105-11835295)
chr4 (120-179)||(30492732-30492791)
chr4 (57-188)||(45889559-45889702)
chr4 (58-110)||(54233902-54233954)
chr4 (3-110)||(3093433-3093539)
chr4 (67-188)||(32141163-32141280)
chr4 (120-189)||(6510112-6510181)
chr4 (138-187)||(17317950-17317999)
chr4 (68-189)||(38692408-38692516)
chr4 (141-188)||(1868208-1868255)
chr4 (138-189)||(6232141-6232192)
chr4 (36-110)||(4408169-4408243)
chr4 (4-114)||(38761788-38761898)
chr4 (6-110)||(29289852-29289959)
chr4 (120-176)||(44835341-44835398)
chr4 (5-89)||(51737285-51737367)
chr4 (128-185)||(54233844-54233900)
chr4 (120-188)||(54091953-54092021)
chr4 (138-188)||(6231652-6231702)
chr4 (123-181)||(29289982-29290040)
chr4 (139-188)||(4408286-4408335)
chr4 (120-188)||(34096010-34096079)
chr4 (57-102)||(51434270-51434315)
chr4 (121-186)||(55126494-55126559)
chr4 (120-188)||(55548313-55548380)
chr4 (57-108)||(6462102-6462153)
chr4 (57-107)||(28116334-28116384)
chr4 (5-95)||(30492828-30492909)
chr4 (63-108)||(34534111-34534157)
chr4 (57-102)||(55126591-55126636)
chr4 (1-81)||(17317806-17317886)
[»] chr2 (45 HSPs)
chr2 (2-189)||(29795156-29795345)
chr2 (1-165)||(40410473-40410639)
chr2 (17-181)||(40987254-40987418)
chr2 (5-188)||(4840687-4840881)
chr2 (20-188)||(1381748-1381916)
chr2 (1-186)||(7743401-7743597)
chr2 (3-185)||(1298738-1298931)
chr2 (17-187)||(4766184-4766341)
chr2 (16-181)||(14378219-14378371)
chr2 (17-183)||(36360347-36360522)
chr2 (3-188)||(34225771-34225944)
chr2 (6-110)||(43460860-43460961)
chr2 (17-188)||(4536572-4536742)
chr2 (13-189)||(24775186-24775373)
chr2 (1-189)||(43388613-43388812)
chr2 (43-185)||(16316710-16316863)
chr2 (120-189)||(33093365-33093434)
chr2 (5-162)||(37106886-37107056)
chr2 (17-181)||(42969904-42970069)
chr2 (57-188)||(14698010-14698130)
chr2 (17-188)||(43344195-43344375)
chr2 (120-188)||(1360175-1360243)
chr2 (120-188)||(2459771-2459839)
chr2 (120-188)||(10580944-10581012)
chr2 (120-188)||(18374850-18374918)
chr2 (57-188)||(41984416-41984561)
chr2 (120-188)||(775972-776039)
chr2 (123-181)||(39866762-39866820)
chr2 (120-189)||(25332568-25332636)
chr2 (5-101)||(11171839-11171935)
chr2 (120-187)||(14511459-14511526)
chr2 (137-188)||(45148055-45148106)
chr2 (36-102)||(775875-775941)
chr2 (36-110)||(4566112-4566186)
chr2 (138-188)||(6591963-6592013)
chr2 (4-54)||(44228609-44228659)
chr2 (57-110)||(2459862-2459915)
chr2 (57-102)||(25332667-25332712)
chr2 (147-188)||(45372645-45372686)
chr2 (120-167)||(43460792-43460839)
chr2 (68-102)||(1360272-1360306)
chr2 (125-174)||(4566214-4566263)
chr2 (144-189)||(19505974-19506018)
chr2 (58-102)||(10580869-10580913)
chr2 (57-109)||(33093458-33093510)
[»] chr7 (52 HSPs)
chr7 (5-188)||(28044101-28044286)
chr7 (1-189)||(36447567-36447757)
chr7 (1-189)||(18886667-18886842)
chr7 (5-188)||(32275203-32275388)
chr7 (1-189)||(41905891-41906089)
chr7 (4-182)||(22627313-22627495)
chr7 (1-188)||(42121549-42121739)
chr7 (1-178)||(34002088-34002277)
chr7 (1-189)||(17869235-17869434)
chr7 (1-188)||(3680879-3681077)
chr7 (3-189)||(33056242-33056433)
chr7 (34-184)||(40207379-40207528)
chr7 (1-189)||(1103482-1103681)
chr7 (7-113)||(34733394-34733500)
chr7 (17-188)||(42259521-42259702)
chr7 (36-188)||(26963478-26963643)
chr7 (17-188)||(40298846-40299019)
chr7 (1-189)||(32345790-32345991)
chr7 (57-188)||(19906413-19906555)
chr7 (3-181)||(26527356-26527544)
chr7 (123-188)||(30514972-30515037)
chr7 (120-189)||(43813431-43813500)
chr7 (123-189)||(36836057-36836123)
chr7 (120-185)||(19288434-19288499)
chr7 (120-189)||(22597228-22597297)
chr7 (120-185)||(42044066-42044131)
chr7 (120-188)||(31416838-31416906)
chr7 (120-181)||(19920358-19920419)
chr7 (23-102)||(42010553-42010632)
chr7 (138-188)||(18733452-18733502)
chr7 (59-188)||(36447083-36447225)
chr7 (36-183)||(39117479-39117638)
chr7 (120-184)||(5723006-5723069)
chr7 (121-189)||(10684918-10684986)
chr7 (36-110)||(10684820-10684894)
chr7 (17-110)||(48838652-48838750)
chr7 (138-189)||(32873268-32873319)
chr7 (16-181)||(30833066-30833241)
chr7 (57-110)||(6521907-6521960)
chr7 (57-110)||(19277057-19277110)
chr7 (36-109)||(47272240-47272313)
chr7 (58-110)||(31416763-31416815)
chr7 (17-113)||(33845391-33845478)
chr7 (59-110)||(36836148-36836199)
chr7 (138-181)||(40805030-40805073)
chr7 (126-188)||(29001634-29001696)
chr7 (70-113)||(18733540-18733583)
chr7 (150-189)||(42753705-42753744)
chr7 (72-110)||(5723090-5723128)
chr7 (58-112)||(29001577-29001631)
chr7 (124-181)||(47271731-47271789)
chr7 (6-47)||(32873127-32873168)
[»] chr1 (61 HSPs)
chr1 (1-188)||(48259819-48260008)
chr1 (1-188)||(11650056-11650254)
chr1 (5-185)||(40060866-40061048)
chr1 (4-188)||(24040983-24041155)
chr1 (1-188)||(84474-84648)
chr1 (1-187)||(1430492-1430666)
chr1 (5-188)||(43929683-43929876)
chr1 (1-110)||(52403563-52403672)
chr1 (3-189)||(5317535-5317732)
chr1 (5-187)||(1428865-1429059)
chr1 (17-185)||(17919793-17919971)
chr1 (1-185)||(28751364-28751560)
chr1 (17-188)||(12002244-12002426)
chr1 (17-187)||(37437375-37437549)
chr1 (58-185)||(44582791-44582931)
chr1 (5-188)||(50349817-50350012)
chr1 (1-143)||(30006182-30006326)
chr1 (5-177)||(10690915-10691074)
chr1 (1-189)||(2459005-2459202)
chr1 (57-188)||(38132202-38132322)
chr1 (5-113)||(6332251-6332359)
chr1 (5-102)||(43105562-43105659)
chr1 (57-188)||(26252116-26252260)
chr1 (43-188)||(22664937-22665091)
chr1 (60-188)||(254926-255068)
chr1 (120-188)||(12851739-12851807)
chr1 (5-189)||(44583769-44583963)
chr1 (120-185)||(45377236-45377301)
chr1 (21-188)||(15698726-15698905)
chr1 (16-100)||(45749470-45749554)
chr1 (25-188)||(48319981-48320144)
chr1 (38-185)||(43755054-43755187)
chr1 (3-181)||(2245791-2245982)
chr1 (62-188)||(17806392-17806529)
chr1 (36-185)||(49894807-49894943)
chr1 (3-185)||(50158276-50158458)
chr1 (120-188)||(44024543-44024611)
chr1 (17-181)||(40719020-40719195)
chr1 (59-189)||(5854238-5854381)
chr1 (126-188)||(26582923-26582985)
chr1 (120-188)||(28200310-28200379)
chr1 (58-110)||(9552368-9552420)
chr1 (140-188)||(9552436-9552484)
chr1 (121-188)||(15647150-15647215)
chr1 (124-188)||(43738344-43738408)
chr1 (120-187)||(11134548-11134614)
chr1 (123-186)||(42650339-42650402)
chr1 (57-110)||(42650261-42650314)
chr1 (120-180)||(52403482-52403542)
chr1 (64-110)||(672300-672346)
chr1 (60-102)||(35149394-35149436)
chr1 (138-188)||(35149485-35149535)
chr1 (126-183)||(50591388-50591446)
chr1 (124-188)||(6332164-6332229)
chr1 (57-102)||(28200234-28200279)
chr1 (5-102)||(43738214-43738311)
chr1 (126-188)||(9333105-9333168)
chr1 (126-188)||(9356878-9356941)
chr1 (68-102)||(12851836-12851870)
chr1 (145-181)||(43105692-43105728)
chr1 (36-108)||(50591309-50591381)
[»] scaffold0072 (1 HSPs)
scaffold0072 (3-181)||(12040-12219)
[»] chr8 (58 HSPs)
chr8 (1-188)||(7612496-7612693)
chr8 (1-189)||(45187252-45187440)
chr8 (28-188)||(29931224-29931386)
chr8 (59-188)||(1774085-1774214)
chr8 (5-189)||(27109780-27109976)
chr8 (17-189)||(22601133-22601315)
chr8 (1-188)||(9022393-9022592)
chr8 (36-185)||(16208951-16209102)
chr8 (1-189)||(38329011-38329185)
chr8 (1-188)||(36915365-36915561)
chr8 (17-187)||(30788934-30789115)
chr8 (57-183)||(34168224-34168355)
chr8 (3-109)||(2067788-2067894)
chr8 (1-188)||(6839215-6839403)
chr8 (1-183)||(32326681-32326875)
chr8 (3-185)||(7129302-7129476)
chr8 (34-185)||(18666534-18666672)
chr8 (57-188)||(8471279-8471399)
chr8 (36-188)||(14541737-14541900)
chr8 (1-110)||(11335995-11336098)
chr8 (68-188)||(156239-156358)
chr8 (1-104)||(32737859-32737961)
chr8 (67-189)||(2803268-2803393)
chr8 (120-186)||(34461670-34461737)
chr8 (17-181)||(41414847-41415012)
chr8 (1-66)||(24732079-24732144)
chr8 (17-184)||(41790113-41790268)
chr8 (59-181)||(26438980-26439102)
chr8 (120-186)||(3095590-3095656)
chr8 (123-188)||(5588563-5588628)
chr8 (5-188)||(11257540-11257731)
chr8 (120-185)||(27416502-27416565)
chr8 (123-185)||(33870755-33870817)
chr8 (120-181)||(8382564-8382625)
chr8 (120-188)||(39970323-39970390)
chr8 (67-178)||(8107191-8107304)
chr8 (126-188)||(35052469-35052531)
chr8 (120-181)||(32661310-32661371)
chr8 (120-188)||(42946120-42946188)
chr8 (3-90)||(5588426-5588512)
chr8 (125-188)||(32061515-32061578)
chr8 (123-181)||(18673189-18673247)
chr8 (5-58)||(2812915-2812968)
chr8 (128-185)||(13108989-13109045)
chr8 (57-107)||(27416593-27416643)
chr8 (4-102)||(42709949-42710046)
chr8 (138-179)||(2812817-2812858)
chr8 (57-110)||(13109076-13109129)
chr8 (17-110)||(39970412-39970496)
chr8 (36-108)||(5044218-5044290)
chr8 (58-110)||(34461595-34461647)
chr8 (145-188)||(3203325-3203368)
chr8 (67-110)||(35052560-35052603)
chr8 (138-181)||(43938125-43938168)
chr8 (138-184)||(2067725-2067770)
chr8 (159-189)||(11335839-11335869)
chr8 (5-54)||(32061419-32061468)
chr8 (5-57)||(3095473-3095525)
[»] chr6 (30 HSPs)
chr6 (5-189)||(1924634-1924819)
chr6 (17-188)||(12828653-12828835)
chr6 (3-183)||(26669056-26669247)
chr6 (5-188)||(29915539-29915735)
chr6 (1-188)||(29927205-29927404)
chr6 (17-188)||(31275613-31275796)
chr6 (5-187)||(23936543-23936735)
chr6 (1-188)||(32258720-32258909)
chr6 (5-188)||(34439368-34439567)
chr6 (120-188)||(4123941-4124009)
chr6 (120-188)||(11785189-11785255)
chr6 (57-188)||(17345146-17345290)
chr6 (123-188)||(6143082-6143147)
chr6 (120-188)||(4132061-4132129)
chr6 (120-188)||(34576542-34576610)
chr6 (123-188)||(6140598-6140662)
chr6 (44-188)||(10494760-10494916)
chr6 (120-189)||(30627088-30627157)
chr6 (120-188)||(26189506-26189574)
chr6 (138-183)||(3015919-3015964)
chr6 (120-214)||(8052317-8052410)
chr6 (137-188)||(30626867-30626918)
chr6 (59-110)||(34576633-34576684)
chr6 (5-108)||(4131908-4132008)
chr6 (125-189)||(19689927-19689989)
chr6 (57-92)||(6992508-6992543)
chr6 (57-107)||(26189600-26189651)
chr6 (158-188)||(19416857-19416887)
chr6 (7-56)||(19689809-19689858)
chr6 (57-110)||(25932718-25932771)
[»] scaffold0119 (1 HSPs)
scaffold0119 (3-183)||(1546-1737)
[»] scaffold0580 (4 HSPs)
scaffold0580 (3-82)||(1689-1768)
scaffold0580 (3-82)||(9428-9507)
scaffold0580 (138-185)||(1642-1691)
scaffold0580 (138-185)||(9381-9430)
[»] scaffold0047 (1 HSPs)
scaffold0047 (57-188)||(70465-70609)
[»] scaffold0886 (1 HSPs)
scaffold0886 (5-188)||(4068-4263)
[»] scaffold0238 (1 HSPs)
scaffold0238 (5-181)||(16000-16186)
[»] scaffold0003 (2 HSPs)
scaffold0003 (120-188)||(321724-321792)
scaffold0003 (57-110)||(321815-321868)
[»] scaffold0189 (2 HSPs)
scaffold0189 (120-214)||(13145-13239)
scaffold0189 (1-102)||(13024-13116)
[»] scaffold0194 (1 HSPs)
scaffold0194 (1-188)||(8156-8345)
[»] scaffold0007 (1 HSPs)
scaffold0007 (68-110)||(158187-158229)
[»] scaffold0519 (1 HSPs)
scaffold0519 (125-188)||(7791-7852)
[»] scaffold0060 (1 HSPs)
scaffold0060 (144-188)||(31623-31667)


Alignment Details
Target: chr5 (Bit Score: 161; Significance: 5e-86; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 14980007 - 14980194
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14980007 acagattaagaaatggaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 14980106  T
Q  101 ttatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    || || || ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14980107 ttgtgaga-aaaagttggagagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 14980194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 181
Target Start/End: Original strand, 43257832 - 43257998
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaa--ag 114  Q
    ||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||  ||    
T  43257832 aatgaaataatcattagacataacacttatactaaactgcccttactttataagaaatagacaaacttaaagttgcattgaaaattgtgtgagaaaacag 43257931  T
Q  115 atggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
     ||  |||| |||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||    
T  43257932 ttgaagaggataaagttgaaagaaaaaaattaaagttatattggaaatgtaaagtgacattcatttt 43257998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 166605 - 166803
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||| |||  ||||||||||||||| || ||||||||||||| |||||||||||   ||||| |||||||||||| ||||||||||||||||||    
T  166605 acagattaaggaatgaaatgaaataatcattagaaataacacttttactaaactgcccttgtattatatgaaaaagacaaacttaaagttgcattgaaaa 166704  T
Q  101 ttatgtgag--aaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    || ||||||  ||||| |||          ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  166705 ttgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 166803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 36660622 - 36660426
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||| |||  ||||||||||||||| || ||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||| ||  ||||    
T  36660622 acagattaaggaatgaaatgaaataatcattagacataacacttttactaaaatgtccttactttataagaaaaagacaaacttaaagttgtataaaaaa 36660523  T
Q  101 ttatgtgagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    || || |||||||| ||| |         |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36660522 ttgtgagagaaaagctggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 36660426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 31889916 - 31889741
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||||||| |||||||||||| |||| |||||||  ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31889916 acagattaagaaatggaatgaaataattattgaatataacgttttcactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 31889817  T
Q  101 ttatgtgagaaaagatggggagggtaaagttgg-aaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    || |||||||             | |||||||| ||  |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31889816 ttgtgtgaga-------------gaaaagttggaaaaaaaaaaattaaagttgtattggaaatgtaaagtgacatttattttgaaacaa 31889741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 3 - 188
Target Start/End: Original strand, 4011618 - 4011790
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||||||| |||| ||||||||||||||||||||  |||| | ||| |||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  4011618 agattaagaaatggaatcaaataatcattggatataacgttttttctaaaatgcccttattttataagaaaaagataaaattaaagttgcattgaaaatt 4011717  T
Q  103 atgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
     |||||||||             ||||||||||| |||||||||||||||||| |||||||||||||||| |||||||| ||||||    
T  4011718 gtgtgagaaa-------------aaagttggaagaaaaaaattaaagttgtatcggaaatgtaaagtgacgttcattttaaaacaa 4011790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 4967447 - 4967546
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4967447 acagattaagaaatggaatgaaataatcattggatataacgcttttactaaactgcccttactttataaaaaaaagacaaaattaaagttgcattgaaaa 4967546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 188
Target Start/End: Original strand, 7388150 - 7388335
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    ||||||| ||||  ||| ||||||||||| || |||| | |||||| ||| || ||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  7388150 agattaataaatgaaataaaataatcattagacataatatttttactaaattgtccttattttataagaaaaagataaatttaaagttgcattgaaaatt 7388249  T
Q  103 atgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
     || |||||||| ||  |||| ||||| ||||||  |||||||||| |||||||| |||| |||||||||||||||||| ||||||    
T  7388250 gtgagagaaaagttgaagaggataaagatggaagataaaaattaaaattgtattgaaaatataaagtgacattcattttaaaacaa 7388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 31557300 - 31557489
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgccctt-actttataagaaaaagacaaaattaaagttgcattgaaaatta 103  Q
    |||||||||| ||||||||||||||||  |||||| |||||||  ||||  ||||| ||||||||||||||||||||| ||||||||||||||||||||     
T  31557300 attaagaaatagaatgaaataatcattaaatataatacttttagtaaacaaccctttactttataagaaaaagacaaacttaaagttgcattgaaaattg 31557399  T
Q  104 tgtgagaaaaga-----tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||| || |     |   ||   |||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  31557400 tgtgagagaatagtatttattgaaaataaagttggaagaaaaaaattaaagttgtattgaaaatgtaaaatgacattcattttgaaacaa 31557489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 34919932 - 34919752
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||| |||  ||| |||||||||||||| ||| || |||||| |||||||||||||||||||||||||||||||| ||||       || | ||    
T  34919932 acagattaaggaatgaaataaaataatcattggacatagcaattttactaaactgcccttactttataagaaaaagacaaacttaa-------ttaataa 34919840  T
Q  101 ttatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    || || |||||||| || |||| || |||||||||| |||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  34919839 ttgtgagagaaaagttgaggagagtcaagttggaagaaaaaaattaaagttatattaggaatgtaaagtgacattcattttgaaacaa 34919752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 12167570 - 12167700
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaat--- 101  Q
    ||||||||||||||||||||||||||| || | ||||||||||| ||||||||||||||||||||||||| | |||| |||||||||||||||||||       
T  12167570 attaagaaattgaatgaaataatcattagacaaaacacttttactaaactgcccttactttataagaaaaggtcaaacttaaagttgcattgaaaatttg 12167669  T
Q  102 tatgtgagaaaagatggggagggtaaagttg 132  Q
    | || |||||||| ||| |||||||||||||    
T  12167670 tgtgagagaaaagttggagagggtaaagttg 12167700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 36783552 - 36783361
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    ||||||||||| ||  ||||||||||||||| || |||||| |||||| ||| |||||||||||  || |||||||||||| ||||||||||||||||||    
T  36783552 acagattaagagatgaaatgaaataatcattagacataacatttttactaaattgcccttacttgttatgaaaaagacaaatttaaagttgcattgaaaa 36783453  T
Q  101 ttatgt--gagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
    || |||  |||||||| ||| |         ||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  36783452 ttgtgtgagagaaaagttggagaatttactaagggtaaagttagaagaaaaaaattagagttgtattggaaatgtaaagtgacattaatttt 36783361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 15400369 - 15400177
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgccc-ttactttataagaaaaagacaaaattaaagttgcattgaaa 99  Q
    ||||||||| ||||||||||||||||| ||| |||||||||||||||| ||| | ||| ||||||||||||||||||  ||| |||||||| ||||| ||    
T  15400369 acagattaaaaaattgaatgaaataattattagatataacacttttactaaaattccctttactttataagaaaaaggaaaacttaaagtttcattggaa 15400270  T
Q  100 at--tatgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
    ||  |||| |||||||| | |          |||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  15400269 attgtatgagagaaaagtttgagtatttattgaggataaagttggaagaagaaaattaaagttgtattggaaatgtaaagtgacattcatttt 15400177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 16886250 - 16886087
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtga--gaaaag 114  Q
    ||||||||||| ||| ||  |||||| ||||| |||||||||||||||||||| ||||        |||||||||||||||||||| |||||  ||||||    
T  16886250 aatgaaataattattagacgtaacacatttactaaactgcccttactttataacaaaac-------ttaaagttgcattgaaaattgtgtgatagaaaag 16886158  T
Q  115 atggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
     ||| ||||||||||||||||| |||||||||||||||||||| ||||| |||| ||| ||||||||||||    
T  16886157 ttggagagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgcaaagcgacgttcattttgaaa 16886087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 188
Target Start/End: Original strand, 42329556 - 42329700
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaa 143  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| |||||||    |||| ||  |         |||||||||||||||| ||||||    
T  42329556 ccttactttataagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattaagggtaaagttggaagaaaaaaa 42329655  T
Q  144 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  42329656 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 42329700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 39059987 - 39059805
Alignment:
Q  16 gaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga 115  Q
    |||||||||||||||| || ||||||||||||| ||||| |||||  |||||| |||||| ||||| |||||||||||||||||||| | |||||||| |    
T  39059987 gaatgaaataatcattagacataacacttttactaaactacccttgttttatatgaaaaaaacaaacttaaagttgcattgaaaattgtatgagaaaaaa 39059888  T
Q  116 tggg-----------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |  |           |||||||||||| ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  39059887 tttggagtatttattgagggtaaagttagaa-gaaaaaattaaagttgtattgaaaatgtaaagcaacattcattttgaaacaa 39059805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 188
Target Start/End: Original strand, 4751502 - 4751685
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga- 115  Q
    ||||||||||||||| || ||||||||||||| ||||  |||||  |||||| |||||| ||||| ||||||||| |||||||||| |||||||||| |     
T  4751502 aatgaaataatcattagacataacacttttactaaacaacccttgttttatatgaaaaaaacaaacttaaagttgaattgaaaattgtgtgagaaaaaag 4751601  T
Q  116 -tgggg---------agggtaaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
     ||| |         |||||||||||||||| |||| ||||||||||||||| ||||| |||||||||||||||||||||||||    
T  4751602 ttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattagaaatataaagtgacattcattttgaaacaa 4751685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 793692 - 793761
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  793692 gagggtagagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 793761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 17 - 188
Target Start/End: Original strand, 4742238 - 4742421
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga- 115  Q
    ||||||||||||||  || ||||||||||||| ||||  |||||  |||||| |||||| ||||| ||||||||| |||||||||| |||||||||| |     
T  4742238 aatgaaataatcatcagacataacacttttactaaacaacccttgttttatatgaaaaaaacaaacttaaagttgaattgaaaattgtgtgagaaaaaag 4742337  T
Q  116 -tgggg---------agggtaaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
     ||| |         |||||||||||||||| |||| ||||||||||||||| ||||| |||||||||||||||||||||||||    
T  4742338 ttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattagaaatataaagtgacattcattttgaaacaa 4742421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 181
Target Start/End: Complemental strand, 33693911 - 33693746
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga- 115  Q
    ||||||||||||||| ||  |||||||||||| || ||||||||| ||||||| ||||  | ||  |||||||||||||||||||| |||||||||| |     
T  33693911 aatgaaataatcattagacgtaacacttttactaa-ctgcccttattttataaaaaaataataagcttaaagttgcattgaaaattgtgtgagaaaaaag 33693813  T
Q  116 -tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
     || ||| |||||| ||||||| |||||||||||||  ||||  ||||||||||||||||| |||||    
T  33693812 ttgaggaaggtaaaattggaagaaaaaaattaaagtgatattaaaaatgtaaagtgacatttatttt 33693746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 188
Target Start/End: Complemental strand, 27810517 - 27810345
Alignment:
Q  28 cattggatataacacttttaccaaactgcccttactttataagaaaaa-gacaaaattaaagttgcattgaaaattatgtgagaaaaga---tggg---- 119  Q
    ||||| ||||||||||||||| |||||||| ||  |||||| |||||| || ||| ||||||||| |||||||||| |||||||||| |   || |        
T  27810517 cattgcatataacacttttactaaactgccattgttttatatgaaaaaagataaatttaaagttgtattgaaaattgtgtgagaaaaaagtttgagtatt 27810418  T
Q  120 ----gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
        |||| |||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27810417 tattgaggataaagttgaaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 27810345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 13066780 - 13066712
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13066780 gagggtaaagttggaaaaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttgaaacaa 13066712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 29653600 - 29653668
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  29653600 gagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttgcaacaa 29653668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 4371430 - 4371362
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||| | || ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4371430 gagggtaaagtttggagaaaaaaattaaagttgtattggaaatgtaaagtgacgttcattttgaaacaa 4371362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 38982231 - 38982299
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  38982231 gagggtaaagttgggagaaaaaaattaaagttgtattggaaatataaagtgacattcattttaaaacaa 38982299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 34171304 - 34171163
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga---tggg--------gagggtaaagttggaaggaaaaaatt 145  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| ||||||| || |   || |        || |||||||||||||  ||||||||    
T  34171304 ccttactttataagaacaagacaaacttaaagttgcattgaaaattctgtgagagaaaagtttgagtatttattgaaggtaaagttggaaa-aaaaaatt 34171206  T
Q  146 aaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||| ||||||||||||||||||||||| ||||||    
T  34171205 aaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 34171163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 27652275 - 27652384
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||||||| |||| ||||| |||   |  |||||| |||||| ||| |  ||||||||||||||||||||||||| ||||||||||||||||||    
T  27652275 acagattaagaaatggaataaaatagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaagacaaatttaaagttgcattgaaaa 27652374  T
Q  101 ttatgtgaga 110  Q
    || |||||||    
T  27652375 ttgtgtgaga 27652384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 33585064 - 33585129
Alignment:
Q  123 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||||||    
T  33585064 ggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacgttcattttaaaacaa 33585129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 4833719 - 4833787
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||||||  ||||||||||||||||||    
T  4833719 gagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcaacattcattttgaaacaa 4833787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 57 - 184
Target Start/End: Original strand, 33822513 - 33822653
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaa 143  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| |||||||    |||| ||  |         | |||||||||| ||| | ||||    
T  33822513 ccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattgaaggtaaagttgaaagaacaaaa 33822612  T
Q  144 ttaaagttgtattggaaatgtaaagtgacattcattttgaa 184  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  33822613 ttaaagttgtattgaaaatgtaaagtgacattcattttgaa 33822653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 8961011 - 8961099
Alignment:
Q  21 aaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    ||||||||||| || ||||||||||||| |||||| | ||| ||||||||||||||| ||| ||||||||||| |||||||| |||||||    
T  8961011 aaataatcattagacataacacttttactaaactgtc-ttattttataagaaaaagataaatttaaagttgcaatgaaaattgtgtgaga 8961099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 12992129 - 12992063
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||| |||||||||||  ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  12992129 gaggataaagttggaa--aaaaaattaaagttgtattagaaatgtaaaatgacattcattttgaaacaa 12992063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 32690821 - 32690882
Alignment:
Q  124 gtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    |||||||||  || ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32690821 gtaaagttgagagaaaaaaattaaagttgtatttgaaatgtaaagtgacattcattttgaaa 32690882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 33741531 - 33741464
Alignment:
Q  121 agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||| |||| ||||||| ||||||| |||| |||||||||||||||||||| |||||||||    
T  33741531 agggtaaagtttgaagaaaaaaatgaaagttgcattgaaaatgtaaagtgacattcatattgaaacaa 33741464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 41845374 - 41845433
Alignment:
Q  126 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    ||||||| ||| ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  41845374 aaagttgaaagaaaaaaattaaaattgtattgaaaatgtaaagtgacattcattttgaaa 41845433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 32963095 - 32963162
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    |||||||||||| |||  |||||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  32963095 gagggtaaagtttgaa--aaaaaaataaagttgtattggaaatgtaaagtggtattcattttgaaacaaa 32963162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 1513172 - 1513075
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    ||||||||||  |||||||||||||||  | |||| ||||||  |||||| ||||||||||| |||| ||| ||||| |||||||||| |||||||||    
T  1513172 attaagaaatgaaatgaaataatcattaaacataatacttttttcaaactacccttactttacaagagaaaaacaaacttaaagttgctttgaaaatt 1513075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 28640149 - 28640088
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
    |||||||||||||| || ||||||||||||||| |||| ||||||||||||||||| |||||    
T  28640149 gagggtaaagttgggagaaaaaaattaaagttgaattgaaaatgtaaagtgacatttatttt 28640088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 17674275 - 17674207
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||| ||||||| || | |||||||||||||| ||||| ||| ||||||||||||||||||||||||||    
T  17674275 gaggataaagttagacgtaaaaaattaaagttttattgaaaacgtaaagtgacattcattttgaaacaa 17674207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 27658682 - 27658726
Alignment:
Q  144 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  27658682 ttaaagttatattggaaatgtaaagtgacattcattttgaaacaa 27658726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 793616 - 793661
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||    
T  793616 ccttactttataagaacaagacaaacttaaagttgcattgaaaatt 793661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 36296225 - 36296286
Alignment:
Q  125 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||  |||||||||||||||||||||||||| |||| || ||||||||| ||||||    
T  36296225 taaagttggaa--aaaaaattaaagttgtattggaaatggaaagcgatattcattttaaaacaa 36296286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 7731697 - 7731747
Alignment:
Q  138 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||||| ||| |||| |||||||||||||||||| ||||||    
T  7731697 aaaaaattaaagttgttttgaaaatataaagtgacattcattttaaaacaa 7731747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 24436498 - 24436552
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcc 57  Q
    |||||||| |||  ||||||||||||||| |||||||||||||||||||| ||||    
T  24436498 agattaaggaataaaatgaaataatcattagatataacacttttaccaaaatgcc 24436552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 33584964 - 33585038
Alignment:
Q  36 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    |||||| |||||| ||| |  |||||||||| | ||| |||||||| |||||||||||||||||||| |||||||    
T  33584964 ataacaattttactaaaataaccttactttacatgaacaagacaaacttaaagttgcattgaaaattgtgtgaga 33585038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 8961117 - 8961162
Alignment:
Q  140 aaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  8961117 aaaattaaagttgcattggaattgtaaagtgacatccattttgaaa 8961162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 29044860 - 29044811
Alignment:
Q  58 cttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtg 107  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||| ||||    
T  29044860 cttactttataagaataagataaacttaaagttgcattgaaaattgtgtg 29044811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 36296144 - 36296196
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgag 109  Q
    ||||| |||||| ||| |||||||| |||||||||||||||||||| ||||||    
T  36296144 ccttaatttataggaacaagacaaacttaaagttgcattgaaaattgtgtgag 36296196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 12167693 - 12167736
Alignment:
Q  145 taaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||    
T  12167693 taaagttgtattgaaaatgtagagtgacattcattttaaaacaa 12167736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 28316759 - 28316712
Alignment:
Q  141 aaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||||||| |||| |||| ||||||| ||||||||||||    
T  28316759 aaattaaagttgtattgaaaatataaaatgacatttattttgaaacaa 28316712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 181
Target Start/End: Original strand, 29051620 - 29051659
Alignment:
Q  142 aattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  29051620 aattaaagttgtattagaaaggtaaagtgacattcatttt 29051659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 189
Target Start/End: Original strand, 24436585 - 24436615
Alignment:
Q  159 aaatgtaaagtgacattcattttgaaacaaa 189  Q
    |||||||||||||||||||||||||||||||    
T  24436585 aaatgtaaagtgacattcattttgaaacaaa 24436615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 38982168 - 38982202
Alignment:
Q  68 aagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||||||||| ||||||||||||||||||||    
T  38982168 aagaaaaagacaaacttaaagttgcattgaaaatt 38982202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 4371543 - 4371491
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcc 57  Q
    |||||| ||| |||||||||||||||| || ||| ||||||||| ||||||||    
T  4371543 attaaggaatggaatgaaataatcattagacatagcacttttactaaactgcc 4371491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 8755591 - 8755651
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaaga 77  Q
    ||||||||||||||  || ||||||||||||  |||||| ||||  |||||||||||||||    
T  8755591 aatgaaataatcatcagacataacacttttattaaactgtcctttttttataagaaaaaga 8755651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 17674381 - 17674329
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataa 69  Q
    |||||||||||||||  | |||||| |||||  ||||||||||||||||||||    
T  17674381 aatgaaataatcattaaacataacatttttattaaactgcccttactttataa 17674329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 95
Target Start/End: Original strand, 29653526 - 29653562
Alignment:
Q  59 ttactttataagaaaaagacaaaattaaagttgcatt 95  Q
    |||||||||||||| |||||||| |||||||||||||    
T  29653526 ttactttataagaacaagacaaacttaaagttgcatt 29653562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 41566914 - 41566878
Alignment:
Q  68 aagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  41566914 aagaaaatgacaaacttaaagttgcattgaaaattat 41566878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 143; Significance: 3e-75; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 26965464 - 26965653
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    ||||||||||||||  |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26965464 acagattaagaaataaaatgaaataatcattggatataacgcttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 26965563  T
Q  101 ttatgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    || |||  |||||||| ||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26965564 ttgtgtgagagaaaagttggagagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 26965653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 27483165 - 27483337
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt--gagaaaag 114  Q
    ||||||||||||||| || ||||||||||||| ||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||    
T  27483165 aatgaaataatcattagacataacacttttactaaatttcccttactttataagaaaaagacaaacttaaagttgcattgaaaattatgtgagagaaaag 27483264  T
Q  115 atggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 187  Q
     ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27483265 ttggagagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 27483337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 3 - 188
Target Start/End: Original strand, 2567970 - 2568157
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||| |||||||||||||||||||| |||||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||||||||    
T  2567970 agattaaggaattgaatgaaataatcattagatataacacttttacaaaaatgtccttactttataagaaaaagacaaacttaaagttgcattgaaaatt 2568069  T
Q  103 atgtgagaaaaga--tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
     ||||||| || |  | |  |||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||    
T  2568070 gtgtgagagaaaaattagaaagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaacaa 2568157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 3 - 188
Target Start/End: Original strand, 37225553 - 37225749
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  37225553 agattaagaaatacaatgaaataatcattggatataatacttttactaaactgtccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 37225652  T
Q  103 atgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
     |||  |||||||| | |          ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37225653 gtgtgagagaaaagttagcgtatttattgagggtaaagttggaagaaaagaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 37225749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 5 - 189
Target Start/End: Complemental strand, 19552725 - 19552538
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacactttt-accaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatta 103  Q
    ||||||||||  ||||||||||||||||||||||||  |||| || |||||| ||||||||||||||||||| ||||||||||||||||||||||||||     
T  19552725 attaagaaatgaaatgaaataatcattggatataacgttttttactaaactgtccttactttataagaaaaatacaaaattaaagttgcattgaaaattc 19552626  T
Q  104 tgtgaga--aaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    |||||||  |||| | | ||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||    
T  19552625 tgtgagagaaaagttagagagggtaaagttggaagaaaaaatttaaagttgtattgaaaatgtaaagtgacattcattttaaaacaaa 19552538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 34060062 - 34059874
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||||||| |||||||||||| |||||||||||   |||||| ||||| |||||||||||||||||||||||||  ||||||||||||||||||    
T  34060062 acagattaagaaatggaatgaaataataattggatataaagtttttactaaactacccttactttataagaaaaagacaa--ttaaagttgcattgaaaa 34059965  T
Q  101 ttatgtgaga--aaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    || || ||||  |||| ||| ||||||||||||| ||| |||||||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  34059964 ttgtgcgagagaaaagttggagagggtaaagttgaaagaaaaaaattaaagttgtattgaaaatgtaaaatgacattcattttaaaacaaa 34059874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 188
Target Start/End: Complemental strand, 25061874 - 25061703
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt--atgtgagaaaag 114  Q
    ||||||||||||||| || ||||||||||||| ||||| ||||||||||||||||||||  |||| ||||||||||||||||||||  ||| ||||||||    
T  25061874 aatgaaataatcattagacataacacttttactaaactacccttactttataagaaaaa--caaacttaaagttgcattgaaaattgtatgagagaaaag 25061777  T
Q  115 atggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
     ||| ||| |||||||||| || ||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  25061776 ttggagagagtaaagttgggagaaaaaaattaaagttgtattggaaatgtaaagtggcattcattttaaaacaa 25061703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 5 - 189
Target Start/End: Original strand, 36771536 - 36771722
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    ||||||||||  ||||||||||| ||| || |||| | |||||| ||||||| |||| ||||||||||||||||||| |||||||||||||||||||| |    
T  36771536 attaagaaatataatgaaataattattagacataatatttttactaaactgctcttattttataagaaaaagacaaacttaaagttgcattgaaaattgt 36771635  T
Q  105 gt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    ||  |||||||| ||| |||| |||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  36771636 gtgagagaaaagttggagaggataaagttgaaagtaaaaaattaaagttgtattgtaaatgtaaagtgacattcattttaaaacaaa 36771722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 181
Target Start/End: Original strand, 1340887 - 1341067
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||  ||| |||||||||||| ||| || ||||||||||| | ||| || | ||||||||||||||||||||||| ||||||||||||||||||||    
T  1340887 agattaaagaatggaatgaaataataattagacataacactttttctaaagtgtctttactttataagaaaaagacaaacttaaagttgcattgaaaatt 1340986  T
Q  103 atgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
     |||  |||||||| ||| |||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  1340987 gtgtgagagaaaagttggagagggtaacgttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 1341067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 44648366 - 44648555
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataag-aaaaagacaaaattaaagttgcattgaaa 99  Q
    |||||||||| |||  ||||||||||||||| || ||||||||||||| |||||||| ||||||||| || ||||||||||| ||||||||| |||||||    
T  44648366 acagattaaggaatgaaatgaaataatcattagacataacacttttactaaactgcctttactttatgagaaaaaagacaaacttaaagttgaattgaaa 44648465  T
Q  100 attatgtgag--aaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||| ||||||  ||||| ||| ||| ||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  44648466 attgtgtgagaaaaaagttggagagagtaaagttggaa-aaaaaaaataaagttgtattggaaatgtaaagtgacattcattttaaaacaa 44648555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 647548 - 647771
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    ||||||||||||||  ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  647548 acagattaagaaatgaaatgaaataatcattagatataacagttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaa 647647  T
Q  101 ttatgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    || |||  |||||||| | |          ||||||||||||||||| |||||||||||||||||||| ||||||||| ||| | ||||||| |||||||    
T  647648 ttctgtaagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaaatgata-tcatttttaaacaaa 647746  T
Q  190 nnnnnnnggttaaagtgacactcat 214  Q
           ||||||||||||||||||    
T  647747 tttttttggttaaagtgacactcat 647771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 189
Target Start/End: Complemental strand, 790265 - 790094
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    ||||||||||  |||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |    
T  790265 attaagaaatgtaatgaaataatcattgaatataacgcttttactaaactgcccttactttataagaaaaagtcaaaattaaagttgcattggaaattgt 790166  T
Q  105 gtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    ||||||             | |||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  790165 gtgaga-------------gaaaagtttgaagaaaaaaattaaagttgtattggaaatgtaaagtgacattaattttgaaacaaa 790094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 5 - 180
Target Start/End: Complemental strand, 40049067 - 40048900
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    |||||| ||| |||||||||||||||| || ||||||||||||  ||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  40049067 attaaggaatggaatgaaataatcattagacataacacttttattaaattgcctttactttataagaaaaagacaaatttaaagttgcattgaaaattat 40048968  T
Q  105 gtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattt 180  Q
    | |||||||| ||| |||||||||| |||||| ||||||||||        |||||||||||||||||||||||||    
T  40048967 gagagaaaagttggagagggtaaagctggaagaaaaaaattaa--------tggaaatgtaaagtgacattcattt 40048900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 46362970 - 46363165
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    |||||| |||||||||||||||||||| ||  ||||| |||||| |||||| ||||||||||||||||||| ||||| |||||||||||||| ||||| |    
T  46362970 attaaggaattgaatgaaataatcattagacctaacatttttactaaactgtccttactttataagaaaaatacaaatttaaagttgcattgtaaattgt 46363069  T
Q  105 gt--gagaaaagatgg---------ggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||  |||||||| |||          |||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46363070 gtgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 46363165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 53716196 - 53716029
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    ||||||||||  |||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||  |||||||||||||||||||| | |    
T  53716196 attaagaaatgaaatgaaataatcattggatataacgcttttactaaactgctcttactttataagaaaaagac--aattaaagttgcattgaaaactgt 53716099  T
Q  105 gtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 187  Q
    ||||||             | ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  53716098 gtgaga-------------gaaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtaacattcattttaaaaca 53716029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 38457653 - 38457460
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    |||||||||||||||||||||||||||  | ||||||||||||| |||||||| ||||||||| ||||||||| ||| ||||| |||||||||||||| |    
T  38457653 attaagaaattgaatgaaataatcattacacataacacttttactaaactgccattactttattagaaaaagataaacttaaaattgcattgaaaattgt 38457554  T
Q  105 gt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 187  Q
    ||  |||||||| |||          ||||||||||||||| | |||||||||||||||||||| ||||||||| ||| |||||||||||||||    
T  38457553 gtgagagaaaagttggagtatttattgagggtaaagttggatgaaaaaaattaaagttgtattgaaaatgtaaaatgatattcattttgaaaca 38457460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 35239556 - 35239390
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    ||||||| ||||||||| ||||||||||| |  |||||| |||||| |||||| ||||||||||||||||||||||||| ||||||||||| ||||||||    
T  35239556 agattaaaaaattgaataaaataatcattaggcataacatttttactaaactgtccttactttataagaaaaagacaaacttaaagttgcagtgaaaatt 35239457  T
Q  103 atgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 183  Q
     |||||||             | |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  35239456 gtgtgaga-------------gaaaagttggaa-gaaaaaattaaagttgtattagaaatgtaaagtgacattcattttga 35239390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 188
Target Start/End: Complemental strand, 83476 - 83295
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt--atgtgagaaaag 114  Q
    |||||| |||||||| || | ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||   || ||||||||    
T  83476 aatgaattaatcattagacacaacacttttactaaactacccttactttataagaaaaagacaaacttaaagttgcattgaaaattgcgtgagagaaaag 83377  T
Q  115 atgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
     | |          |||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  83376 ttagagtatttaatgagggtaaagttggaa-gaaaaaattaaagttgtattgaaaatgtaaaatgacattcattttgaaacaa 83295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 31290930 - 31291111
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||| |||  ||||||||||| ||| || ||||||||||||| |||||||| ||| ||||| ||||||||| ||| ||||||||||| ||||||    
T  31290930 acagattaaggaatgaaatgaaataattattagacataacacttttactaaactgcctttattttattagaaaaaga-aaacttaaagttgcaatgaaaa 31291028  T
Q  101 ttatgtgaga--aaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
    || |||||||  |||| ||  |||  |||||||| ||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  31291029 ttgtgtgagagaaaagttgaagagcataaagttgaaagaaaaaaattaaagttgtattagaaatgtaaagtgatattcatttt 31291111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 43580676 - 43580473
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataa--gaaaaagacaaaattaaagttgcattgaa 98  Q
    |||||||||| ||| ||||||||||||||||  |||||||| |||||| |||||||||||  ||||||   |||||||||||| ||||||||||||||||    
T  43580676 acagattaaggaatagaatgaaataatcattacatataacatttttactaaactgcccttgttttatatatgaaaaagacaaatttaaagttgcattgaa 43580577  T
Q  99 aattatgtgag---aaaagatgggg---------agggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    |||| ||||||   ||||| ||| |         ||||||||||||||||  |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  43580576 aattgtgtgagaaaaaaagttggagtatttattaagggtaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacatttattttgaaa 43580477  T
Q  186 caaa 189  Q
    ||||    
T  43580476 caaa 43580473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 188
Target Start/End: Complemental strand, 44854508 - 44854314
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||  |||||||||||||||||||| || |  |||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  44854508 agattaatgaattgaatgaaataatcattagaca--acacttttactaaactgcccttactttataagaaaaatacaaacttaaagttgcattgaaaatt 44854411  T
Q  103 ---atgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
        || |||||||| |||          ||||||||| |||||| |||||| ||||| |||||||| |||||||||||||| |||||||||||||||    
T  44854410 gtactgagagaaaagttggagtatttattgagggtaaaattggaa-gaaaaagttaaaattgtattgaaaatgtaaagtgacgttcattttgaaacaa 44854314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 36 - 188
Target Start/End: Original strand, 54933194 - 54933359
Alignment:
Q  36 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------ag 122  Q
    |||||| |||||| ||| |  |||||||||||||||||| |||||| |||||||||||||||||||| |||||||    |||| ||| |         ||    
T  54933194 ataacaattttactaaaataaccttactttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgag 54933293  T
Q  123 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  54933294 ggtaaagttggaagaaaaaaattaaagttgcattggaaatgtaaagtgacattcattttgaaacaa 54933359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 2662464 - 2662557
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    ||||||||||||||| || ||||||||||||| ||| |||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  2662464 aatgaaataatcattagacataacacttttactaaattgcccttattttataagaaaaagacaaatttaaagttgcattgaaaattgtgtgaga 2662557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 38165617 - 38165712
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattg 96  Q
    |||||||||| |||  |||||||||||||||  | ||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||    
T  38165617 acagattaaggaatgtaatgaaataatcattaaacataacacttttactaaactgtccttactttataagaaaaagacaaacttaaagttgcattg 38165712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 70 - 189
Target Start/End: Original strand, 43599855 - 43599976
Alignment:
Q  70 gaaaaagacaaaattaaagttgcattgaaaattatgtgaga--aaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaa 167  Q
    |||||||||||| ||||||||||||| |||||| |||||||  |||| ||| ||||||||||||  ||| ||||||||||||||||||   |||||||||    
T  43599855 gaaaaagacaaacttaaagttgcattaaaaattgtgtgagagaaaagttggagagggtaaagttaaaagaaaaaaattaaagttgtatgaaaaatgtaaa 43599954  T
Q  168 gtgacattcattttgaaacaaa 189  Q
      ||||||||||||||||||||    
T  43599955 acgacattcattttgaaacaaa 43599976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 2988696 - 2988763
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2988696 gagggtaaagttggaagaaaaaaattaaa-ttgtattggaaatgtaaagtgacattcattttgaaacaa 2988763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 57 - 185
Target Start/End: Complemental strand, 44645481 - 44645340
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt----gagaaaagatgggg---------agggtaaagttggaaggaaaaaa 143  Q
    |||||||||||| |||||||| ||| ||||||||||||||||||||||||    |||||||| ||| |         |||||||||||||||| ||||||    
T  44645481 ccttactttatatgaaaaagataaacttaaagttgcattgaaaattatgtaagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaa 44645382  T
Q  144 ttaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    ||||||||| || |||||||||||| ||||||||||||||||    
T  44645381 ttaaagttgcatgggaaatgtaaagcgacattcattttgaaa 44645340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 41287255 - 41287082
Alignment:
Q  21 aaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaa------g 114  Q
    ||||||||||| || ||||||||||||| ||||||| |||| |||||| ||||||  |||| |||||||||||||||||||| ||||||||||      |    
T  41287255 aaataatcattagacataacacttttactaaactgcacttattttatatgaaaaactcaaacttaaagttgcattgaaaattgtgtgagaaaatggtttg 41287156  T
Q  115 a-----tggggagggtaaagttggaag--gaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
    |     |   ||||| |||||||||||   ||||||||||||||||||||||||||||||||||||| ||||||    
T  41287155 agtatttattgagggaaaagttggaagaaaaaaaaattaaagttgtattggaaatgtaaagtgacatccatttt 41287082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 181
Target Start/End: Complemental strand, 42740403 - 42740238
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga- 115  Q
    ||||||||||||||| ||  |||||||||||| || ||||||||| ||||||| ||||  | ||  |||||||||||||||||||| |||||||||| |     
T  42740403 aatgaaataatcattagacgtaacacttttactaa-ctgcccttattttataaaaaaataataagcttaaagttgcattgaaaattgtgtgagaaaaaag 42740305  T
Q  116 -tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
     || ||| |||||| ||||||| |||||||||||||  ||||  |||| |||||||||||| |||||    
T  42740304 ttgaggaaggtaaaattggaagaaaaaaattaaagtgatattaaaaatataaagtgacatttatttt 42740238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 9167661 - 9167810
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagat 116  Q
    |||||||||||||||  | |||||| |||||| |||||||||||||||||| | ||||| | ||| ||||| |||||||||||||  ||  ||||||| |    
T  9167661 aatgaaataatcatttcacataacatttttactaaactgcccttactttattaaaaaaaaa-aaacttaaaattgcattgaaaatcgtgaaagaaaagtt 9167759  T
Q  117 ggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaa 167  Q
    |  || |||||||| ||||| |||||||||||||||||||| |||| ||||    
T  9167760 gaagatggtaaagtaggaagaaaaaaattaaagttgtattgaaaatataaa 9167810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 181
Target Start/End: Complemental strand, 45095723 - 45095559
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacac-ttttaccaaactgccc-ttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||| ||| ||||||||||||||||  | ||||||| |||||| ||| ||||| |||||||||||||||| |||||| |||||| ||               
T  45095723 attaaggaatggaatgaaataatcattaaacataacacattttactaaaatgccccttactttataagaaaaggacaaacttaaaggtg----------- 45095635  T
Q  103 atgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
     || |||||||| ||| ||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||    
T  45095634 -tgagagaaaagttggagagggtaaagttggaa--aaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 45095559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 5244777 - 5244673
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    ||||||||||||||||||||||||||| || ||||||||||||  ||| |  | |||| |||||||||||| ||||| ||||||||||||||||||| ||    
T  5244777 attaagaaattgaatgaaataatcattagacataacacttttattaaagtctctttac-ttataagaaaaaaacaaacttaaagttgcattgaaaataat 5244679  T
Q  105 gtgaga 110  Q
    ||||||    
T  5244678 gtgaga 5244673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 185
Target Start/End: Original strand, 25722450 - 25722612
Alignment:
Q  36 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------ag 122  Q
    |||||| |||||| ||| |  |||||||||| ||||| |||||||| |||||||||||||||||||| |||||||    |||| ||| |         ||    
T  25722450 ataacaattttactaaaataaccttactttacaagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatttag 25722549  T
Q  123 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    ||||||||  |||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  25722550 ggtaaagtatgaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa 25722612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 32303991 - 32304060
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  32303991 gagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttcaaaacaaa 32304060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 43169398 - 43169333
Alignment:
Q  123 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43169398 ggtaaagttagaagaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttgaaacaa 43169333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 54261614 - 54261414
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    ||||||||||||||||||| || || |||   |  |||||| |||||| ||| |  ||||||||||||||||||| ||||| ||||||||| ||||||||    
T  54261614 acagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaa 54261515  T
Q  101 ttatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 187  Q
    || |||||||    |||| | | |         |||||||||||||||| ||||||||||||||| |||| |||||||||| ||| ||||||||||||||    
T  54261514 ttgtgtgagagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacgttcattttgaaaca 54261415  T
Q  188 a 188  Q
    |    
T  54261414 a 54261414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 22730989 - 22730924
Alignment:
Q  123 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||| ||||||    
T  22730989 ggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcagtttaaaacaa 22730924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 188
Target Start/End: Original strand, 43687872 - 43688040
Alignment:
Q  36 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------ag 122  Q
    |||||| |||||| ||| |  |||||||||||||||| |||||||| |||||||| ||||||||||| |||||||    |||| ||| |         ||    
T  43687872 ataacaattttactaaaataaccttactttataagaacaagacaaatttaaagtttcattgaaaattgtgtgagagagaaaagttggagtatttattgag 43687971  T
Q  123 ggtaaagttggaaggaaaa---aattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||| ||||   |||||||||||||||||||||||||||||||||| |||||| |||||    
T  43687972 ggtaaagttggaagaaaaaaaaaattaaagttgtattggaaatgtaaagtgacatttattttggaacaa 43688040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 43736842 - 43736922
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaa 98  Q
    ||||||||||||||| |||||||||||||||| ||||| | |||| ||||||||||||||| ||| ||||||||||||||||    
T  43736842 aatgaaataatcattagatataacacttttactaaactactcttattttataagaaaaaga-aaacttaaagttgcattgaa 43736922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 20512450 - 20512651
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    ||||||||||||||||||| ||||| |||   |  ||| || |||||| ||| |  ||||||||||||||||||| ||||| ||||||||| ||||||||    
T  20512450 acagattaagaaattgaataaaatagtcaaatgtcatagcaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaa 20512549  T
Q  101 ttatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt-aaagttgtattggaaatgtaaagtgacattcattttgaaac 186  Q
    || |||||||    |||| ||| |         | |||||||||||||| |||||||| ||||||| |||| |||||||||| |||||||||||||||||    
T  20512550 ttgtgtgagagagaaaagttggagtatttattgaaggtaaagttggaagaaaaaaatttaaagttgcattgaaaatgtaaagcgacattcattttgaaac 20512649  T
Q  187 aa 188  Q
    ||    
T  20512650 aa 20512651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 51381867 - 51381720
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga-----aaagatggg----------gagggtaaagttggaaggaaaa 141  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||| |||||||     ||| || ||          |||||||||||| |||| ||||    
T  51381867 ccttactttataataaaaagacaaacttaaagttgcattgaaaattgtgtgagagagagaaaaattggagtatttatcgagggtaaagttagaagaaaaa 51381768  T
Q  142 aa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    || |||||||||||||| ||||||||||||||||| ||||||||||||    
T  51381767 aaattaaagttgtattgtaaatgtaaagtgacatttattttgaaacaa 51381720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 181
Target Start/End: Original strand, 4476334 - 4476498
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgag--aaaag 114  Q
    ||||||||||||||| ||  |||||||||||| || ||||||||| ||||||| ||| | | ||  |||||||||||||||||||| ||||||  |||||    
T  4476334 aatgaaataatcattagacgtaacacttttactaa-ctgcccttattttataaaaaata-ataagcttaaagttgcattgaaaattgtgtgagaaaaaag 4476431  T
Q  115 atggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
     || ||| |||||| ||| ||| ||||||||||| |  ||||  ||||||||||||||||| |||||    
T  4476432 ttgaggaaggtaaaattgaaagaaaaaaattaaaatgatattaaaaatgtaaagtgacatttatttt 4476498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 13485909 - 13485960
Alignment:
Q  138 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13485909 aaaaaattaaagttgtattggaaatgtaaattgacattcattttgaaacaaa 13485960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 188
Target Start/End: Complemental strand, 27027899 - 27027732
Alignment:
Q  36 ataacacttttaccaaactgcccttactttataagaaaaa----gacaaaattaaagttgcattgaaaattatgtgaga--aaagatgggg--------- 120  Q
    ||||||||||||  ||| || ||||||||||||| |||||    |||||| |||||||||||||||||||| |||||||  |||| ||| |             
T  27027899 ataacacttttaataaagtgtccttactttataaaaaaaaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagttggagtatttatta 27027800  T
Q  121 agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||| ||||||| |||| ||||||||||| |||||||||||||||||| ||||||| ||||||||||||    
T  27027799 aggataaagtttgaagaaaaaaattaaatttgtattggaaatgtaaattgacattaattttgaaacaa 27027732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 27039519 - 27039415
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaa-gacaaaattaaagttgcattgaaaatta 103  Q
    |||||| ||| ||||||||  ||||||  ||||||||||||||| ||| || ||||||||||||| ||||| |||||| ||||||||||||||||||||     
T  27039519 attaagtaatggaatgaaa--atcattaaatataacacttttactaaagtgtccttactttataaaaaaaaagacaaatttaaagttgcattgaaaattg 27039422  T
Q  104 tgtgaga 110  Q
    |||||||    
T  27039421 tgtgaga 27039415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 35099453 - 35099518
Alignment:
Q  121 agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 186  Q
    ||||||||||||| || |||||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  35099453 agggtaaagttgggagaaaaaaattaaagttgtattggaaatgtaaaatgacatttattatgaaac 35099518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 36310339 - 36310404
Alignment:
Q  123 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||| || |||||| ||||||||||||||||||||||| ||||||| ||||||||||||    
T  36310339 ggtaaagttgggagaaaaaaaataaagttgtattggaaatgtaaaatgacatttattttgaaacaa 36310404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 53560807 - 53560754
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  53560807 ccttactttataagaaaaagacaatcttaaagttgcattgaaaattatgtgaga 53560754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 189
Target Start/End: Complemental strand, 4392088 - 4391902
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    ||||||||||  ||||||||||| ||| || ||||||||||||| |||||||||         |||||||||||||| |||||||||||||||||||| |    
T  4392088 attaagaaatgaaatgaaataattattagacataacacttttactaaactgccc---------aagaaaaagacaaacttaaagttgcattgaaaattgt 4391998  T
Q  105 gtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    | ||||  |||| ||| |         ||||||||||||| || ||||||||||| ||||| |  ||||||||||||| ||||||||| |||||||    
T  4391997 gcgagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaaattgtactaaaaatgtaaagtgatattcattttaaaacaaa 4391902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 185
Target Start/End: Complemental strand, 22414948 - 22414757
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    ||||||||||||  ||||||||||| ||| || |||| |||||||  ||||| ||  || |||||||||||| || ||| ||||||||||||||||||||    
T  22414948 agattaagaaatgaaatgaaataattattagacataatacttttattaaactacctatagtttataagaaaa-gagaaacttaaagttgcattgaaaatt 22414850  T
Q  103 atgtgagaaaagatgggg---------agggtaaagttggaaggaaaaaa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
     ||| ||| ||| | | |         | |||||||||||||| |||||| |||||||| ||||  |||||||||||||||||||||||||||    
T  22414849 gtgtaagagaaggttgagtatttattgaaggtaaagttggaagaaaaaaaattaaagttatattaaaaatgtaaagtgacattcattttgaaa 22414757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 185
Target Start/End: Original strand, 43600152 - 43600341
Alignment:
Q  7 taagaaattgaatgaaataatcattggatataacacttttaccaaactgccctt-actttataagaaaaa-gacaaaattaaagttgcattgaaaattat 104  Q
    ||||||||  ||| ||||||| ||| ||||||||| |||||| ||||| ||||| ||||||||| ||||| |||||| ||||||||  |||| ||||| |    
T  43600152 taagaaatgaaataaaataattattagatataacatttttactaaacttccctttactttataaaaaaaatgacaaatttaaagttatattggaaattgt 43600251  T
Q  105 gtgaga--aaagatggg--------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    ||||||  ||||  | |        ||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||| |||||||||    
T  43600252 gtgagagaaaagtagagtatttattgagggtaaagttggaag-aaaaaattaaaattgtattgaaaatgtaaagtaacatttattttgaaa 43600341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 3000883 - 3000751
Alignment:
Q  68 aagaaaaagacaaaattaaagttgcattgaaaattatgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaa-ttaaagttgtat 155  Q
    |||||||||||||| |||||||||||||||||||| |||||||  |||| ||| |         |||||| |||||| || |||||| ||||||||||||    
T  3000883 aagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagttggagtatttattgagggtagagttgggagaaaaaaaattaaagttgtat 3000784  T
Q  156 tggaaatgtaaagtgacattcattttgaaacaa 188  Q
    || ||||||||||| ||||||||||| ||||||    
T  3000783 tgaaaatgtaaagtaacattcattttaaaacaa 3000751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 36541558 - 36541493
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    ||||||||||||||||| || ||| ||||||||||||| |||||||||  ||||||||||||||||    
T  36541558 gagggtaaagttggaagaaataaagtaaagttgtattgaaaatgtaaaacgacattcattttgaaa 36541493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 42857148 - 42857212
Alignment:
Q  123 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 187  Q
    ||||||||| |||| |||||||||| ||||||| |||||||||||||||||||| |||| |||||    
T  42857148 ggtaaagttagaagaaaaaaattaatgttgtatgggaaatgtaaagtgacattccttttaaaaca 42857212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 52222831 - 52222892
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 183  Q
    ||||||||||||||||| ||||||||||||||||||||||||||  ||  ||||||||||||||    
T  52222831 gagggtaaagttggaagaaaaaaattaaagttgtattggaaatg--aaacgacattcattttga 52222892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 22731126 - 22731040
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagtt 90  Q
    ||||||||||||  |||||||||||||||  | |||||| |||||| |||||| ||| | ||||||||||||||||||| ||||||||    
T  22731126 agattaagaaatataatgaaataatcattaaacataacatttttactaaactg-cctcaatttataagaaaaagacaaacttaaagtt 22731040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 188
Target Start/End: Complemental strand, 49470851 - 49470788
Alignment:
Q  125 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||| ||||| | |||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  49470851 taaatttggatgaaaaaaattaaagttgtattgaaaatgtaaaacgacattcattttgaaacaa 49470788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 180
Target Start/End: Original strand, 15514830 - 15514872
Alignment:
Q  138 aaaaaattaaagttgtattggaaatgtaaagtgacattcattt 180  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  15514830 aaaaaattaaagttgtattggaaatgtaaagtgacatttattt 15514872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 38165733 - 38165783
Alignment:
Q  126 aaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacatt 175  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  38165733 aaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacatt 38165783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 52202383 - 52202445
Alignment:
Q  126 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||| |||||||||||||||||||| ||||| |||  |||||||||||| ||||||    
T  52202383 aaagttggaagaaaaaaattaaagttgtattgaaaatgcaaaacgacattcattttaaaacaa 52202445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 2988620 - 2988665
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||    
T  2988620 ccttactttataagaacaagacaaacttaaagttgcattgaaaatt 2988665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 43169477 - 43169424
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    |||||||||||||||| |||||||| ||||||||| |||||||||| |||||||    
T  43169477 ccttactttataagaataagacaaacttaaagttgtattgaaaattgtgtgaga 43169424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 50420321 - 50420258
Alignment:
Q  124 gtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||| |||||||||||||||||||  ||||||||| ||||||| ||||| ||||||    
T  50420321 gtaaagttggaag-aaaaaattaaagttgtattaaaaatgtaaaatgacatttatttttaaacaa 50420258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 125 - 189
Target Start/End: Complemental strand, 53560726 - 53560663
Alignment:
Q  125 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    |||||||||||| ||||||||||||||| |||| |||||||||  |||||| |||||||||||||    
T  53560726 taaagttggaag-aaaaaattaaagttgcattgtaaatgtaaaacgacatttattttgaaacaaa 53560663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 5244652 - 5244584
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    |||||||||||||||   |||||||||||||| ||||  |||||||| |||||||||||||| |||||||    
T  5244652 gagggtaaagttggata-aaaaaattaaagttatattaaaaatgtaaggtgacattcattttaaaacaaa 5244584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 42007072 - 42007117
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    ||||| |||||||||| |||||||| ||||||||||||||||||||    
T  42007072 ccttattttataagaacaagacaaacttaaagttgcattgaaaatt 42007117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 42791388 - 42791330
Alignment:
Q  126 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    ||||||||||| ||||||||||||||||| ||  ||| |||||||||||| |||||||||    
T  42791388 aaagttggaagaaaaaaattaaagttgtactgataat-taaagtgacattgattttgaaa 42791330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 43599520 - 43599571
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttata 68  Q
    ||||||||||||||| || |||| |||||||| |||||||||||| ||||||    
T  43599520 aatgaaataatcattagacataatacttttactaaactgcccttattttata 43599571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 16240706 - 16240672
Alignment:
Q  68 aagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||||||||| ||||||||||||||||||||    
T  16240706 aagaaaaagacaaacttaaagttgcattgaaaatt 16240672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 105
Target Start/End: Original strand, 15514752 - 15514785
Alignment:
Q  72 aaaagacaaaattaaagttgcattgaaaattatg 105  Q
    |||||||||| |||||||||||||||||||||||    
T  15514752 aaaagacaaacttaaagttgcattgaaaattatg 15514785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 32303915 - 32303960
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||||||||||||||| |||| |||||| || ||||||||||    
T  32303915 ccttactttataagaaaaaggcaaacttaaagctgtattgaaaatt 32303960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 36541634 - 36541581
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    |||| ||||||| ||| |||||||| |||||||||||| ||||||| |||||||    
T  36541634 ccttgctttataggaacaagacaaacttaaagttgcatcgaaaattgtgtgaga 36541581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 3e-72; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 3 - 188
Target Start/End: Complemental strand, 52732782 - 52732594
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  52732782 agattaaaaaatggaatgaaataatcattggatataacacttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaaatt 52732683  T
Q  103 atgt--gagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
     |||  |||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  52732682 gtgtgagagaaaagttggggagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttaaaacaa 52732594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 5 - 189
Target Start/End: Original strand, 43421087 - 43421273
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    |||||||||| |||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||| ||| |    
T  43421087 attaagaaatggaatgaaataatcattggatataatacttttactaaattgctcttactttataagaaaaagacaaaattaaagttgcattgaatattgt 43421186  T
Q  105 gt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    ||  |||||||  ||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  43421187 gtgagagaaaacctggagagggtaaagttggaagaaaaaaattaaagttgtatgggaaatgtaaagtgaccttcattttgaaacaaa 43421273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 34360197 - 34360033
Alignment:
Q  2 cagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaat 101  Q
    ||||||||| |||  ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34360197 cagattaaggaatgaaatgaaataatcattagatataacacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaat 34360098  T
Q  102 tatgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgt 164  Q
    | |||  |||||||| ||| ||||||||||||||||| |||||| ||||||||||||| ||||||    
T  34360097 tgtgtgagagaaaagttggagagggtaaagttggaagaaaaaaaataaagttgtattgaaaatgt 34360033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 17 - 188
Target Start/End: Original strand, 15501129 - 15501302
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt--gagaaaag 114  Q
    ||||||||||||||| || |||||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||| |||||| |||  ||||||||    
T  15501129 aatgaaataatcattagacataacatttttactaaactgcccttactttataagaaaaatacaaacttaaagttgcattaaaaattgtgtgagagaaaag 15501228  T
Q  115 atggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
     ||  ||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15501229 ttgaagagagtaatgttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttcaaacaa 15501302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 21045326 - 21045150
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||| ||| ||||||||||||||||||||||||  ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21045326 acagattaaggaatggaatgaaataatcattggatataaggcttttattaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 21045227  T
Q  101 ttatgtgagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    || |||||||             | |||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21045226 ttgtgtgaga-------------gaaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaaa 21045150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 5 - 189
Target Start/End: Complemental strand, 51930765 - 51930594
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    |||| ||||| |||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  51930765 attatgaaatggaatgaaataataattggatataacgcttttactaaactgcccttactttataagaaaatgacaaaattaaagttgcattgaaaattgt 51930666  T
Q  105 gtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    ||||||             | ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  51930665 gtgaga-------------gaaaagttggaagaaaaaaattaaaattgtattggaaatgtaaagcgacattcattttgaaacaaa 51930594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 32140945 - 32141119
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||| ||||||||||  ||||||||||  |||| ||||||||||||    
T  32140945 acagattaagaaattgaatgaaataatcattagacataacacttttactaaactgcccctactttataaacaaaagacaaacataaatttgcattgaaaa 32141044  T
Q  101 ttatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    || |||||||             | ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32141045 ttgtgtgaga-------------gaaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtggcattcattttgaaacaa 32141119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 5 - 181
Target Start/End: Complemental strand, 54512212 - 54512034
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    ||||||||||  ||||||||||| ||||||||||||  |||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| |    
T  54512212 attaagaaatgaaatgaaataataattggatataacgtttttactaaactgctcttactttataagaaaatgacaaaattaaagttgcattgaacattgt 54512113  T
Q  105 gt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
    ||  |||||||| ||| |||| ||||||||||||  ||||||||||||| ||||  ||||||||||||| |||||||||    
T  54512112 gtgagagaaaagttggagaggataaagttggaagataaaaattaaagttatattaaaaatgtaaagtgatattcatttt 54512034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 44855433 - 44855237
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    |||||||||| ||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  44855433 attaagaaatagaatgaaataatcattgaatataacgcttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaaattgt 44855334  T
Q  105 gt--gagaaaagatgg---------ggagggtaaag--ttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||  |||||||| |||          ||||||||||  |||||||  |||| |||||||||||||||||||||||||||||||| |||| |||||||    
T  44855333 gtgagagaaaagttggattatttattgagggtaaagaattggaagagaaaacttaaagttgtattggaaatgtaaagtgacatttatttcgaaacaa 44855237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 188
Target Start/End: Complemental strand, 50072438 - 50072276
Alignment:
Q  7 taagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt 106  Q
    |||||||| |||||||||||||||||||||||||  |||||| ||||||||||||||||||||||      ||||||||||||||||||||||||| |||    
T  50072438 taagaaatggaatgaaataatcattggatataacgtttttactaaactgcccttactttataaga------caaaattaaagttgcattgaaaattgtgt 50072345  T
Q  107 gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||             |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  50072344 gagaaaa-------------aagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 50072276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 36805409 - 36805600
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||| |||  ||||||||||||||| || ||||||||||||| |||||| ||||| |||||| |||||||||||| ||||||||| ||||||||    
T  36805409 acagattaaggaatgaaatgaaataatcattagacataacacttttactaaactgtccttagtttatatgaaaaagacaaacttaaagttgtattgaaaa 36805508  T
Q  101 ttatgtgag--aaaagatg--gggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    || ||||||  ||||| ||  | |||| |||||||||||| |||||||||||||||||||| ||||||||| | |||| |||||| ||||||    
T  36805509 ttgtgtgagaaaaaagttggagtgaggttaaagttggaagaaaaaaattaaagttgtattgcaaatgtaaaataacatacattttaaaacaa 36805600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 188
Target Start/End: Complemental strand, 37445837 - 37445655
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtg--agaaaag 114  Q
    ||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||  ||||||     
T  37445837 aatgaaataatcattagacataacacttttactaaactgcccttactttataagaaaaagacaaatttaaagttgcattaaaaattatgtgaaagaaaaa 37445738  T
Q  115 atgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
     | |          ||||||||||||||||| |||||||||||||||||||  ||||||||| ||||||||||||| ||||||    
T  37445737 tttgaatatttattgagggtaaagttggaagaaaaaaattaaagttgtattaaaaatgtaaaatgacattcattttaaaacaa 37445655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 189
Target Start/End: Original strand, 31817162 - 31817332
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataag-aaaaagacaaaattaaagttgcattgaaaatta 103  Q
    |||||||||| |||||||||||||||||||||||||  |||||| ||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||     
T  31817162 attaagaaatggaatgaaataatcattggatataacgtttttactaaacttcccttactttataagaaaaaatacaaaattaaagttgcattgaaaattg 31817261  T
Q  104 tgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    |||||||             | ||||||||||| ||||||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  31817262 tgtgaga-------------gaaaagttggaagaaaaaaa--aaagttgcattggaaatgtaaagtgacattcattttgaaacaaa 31817332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 19849273 - 19849079
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    ||||||||||  ||| ||||||| |||  |||||||| |||||| |||||||||| ||||||||||||||| ||||| |||||||||||||||||||| |    
T  19849273 attaagaaatgaaataaaataattattacatataacatttttactaaactgccctcactttataagaaaaaaacaaacttaaagttgcattgaaaattgt 19849174  T
Q  105 gt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||  |||||||| |||          ||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||| ||||||    
T  19849173 gtgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaattgtaaagtgaaattcattttaaaacaa 19849079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 181
Target Start/End: Original strand, 45520419 - 45520607
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaat- 101  Q
    |||||||||||| |||| ||||||||||| || ||||||||||||| || |||||||||| ||||||||| |||||||| ||||||||||||| |||||     
T  45520419 agattaagaaatggaataaaataatcattagacataacacttttactaagctgcccttacattataagaataagacaaacttaaagttgcattaaaaatt 45520518  T
Q  102 -tatgtgagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
     |||| |||||||| | | |         ||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  45520519 gtatgagagaaaagtttgagtatttatcaaggataaagttggaa-gaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 45520607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 188
Target Start/End: Original strand, 39671068 - 39671238
Alignment:
Q  4 gattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatta 103  Q
    ||||||||||| ||||||||| |||||| || ||||||| ||||| ||||| || ||||||||||||||||| ||||| ||||||||||||||||||||     
T  39671068 gattaagaaatggaatgaaattatcattagacataacacatttactaaactacctttactttataagaaaaaaacaaacttaaagttgcattgaaaattg 39671167  T
Q  104 tgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||             | |||||| ||| |||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  39671168 tgtgaga-------------gaaaagtt-gaaagaaaaaattaaagttgtattggaaatgtaaaacgacattcattttgaaacaa 39671238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 56422958 - 56423056
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 99  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||| |||||| | |||||||||||||||||||| |||||||| |||||||||||    
T  56422958 acagattaagaaatcgaatgaaataatcattggatataacgcttttactaaactgtctttactttataagaaaaagacgaaattaaaattgcattgaaa 56423056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 36 - 188
Target Start/End: Complemental strand, 24259771 - 24259606
Alignment:
Q  36 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------ag 122  Q
    |||||| |||||| ||| |  |||||||||||||||||| |||||| |||||||||||||||||||| |||||||    |||| ||| |         ||    
T  24259771 ataacaattttactaaaataaccttactttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgag 24259672  T
Q  123 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24259671 ggtaaagttggaagaaaaaaattaaagttgcattggaaatgtaaagtgacattcattttgaaacaa 24259606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 189
Target Start/End: Complemental strand, 30022258 - 30022062
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||| |||  ||| |||||||||||  ||||||||||||||| ||||| || ||  | ||||||||||||||||| | ||||||||||||||||||    
T  30022258 agattaaggaatgaaataaaataatcattatatataacacttttactaaactacc-ttcttgtataagaaaaagacaaactcaaagttgcattgaaaatt 30022160  T
Q  103 atgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
     |||||||  |||| ||  |         |||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  30022159 gtgtgagagaaaagttgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtcaagtaacattcattttgaaacaaa 30022062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 188
Target Start/End: Complemental strand, 22212518 - 22212336
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaa--g 114  Q
    ||||||||||||||| || ||||||||||||| |||||||| ||  ||||||  |||||  |||| ||||||||| |||||||||| ||||||||||  |    
T  22212518 aatgaaataatcattagacataacacttttacaaaactgcctttgttttatataaaaaactcaaacttaaagttgtattgaaaattgtgtgagaaaaatg 22212419  T
Q  115 atgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
     ||| |         |||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||| ||||||    
T  22212418 ttggagtatttattgagggtaaagttggaagaaaaaaattaaagttatattggaaatgtaaggtgacattcattttaaaacaa 22212336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 31941697 - 31941553
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaa----agatgggg---------agggtaaagttggaaggaaaaaa 143  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||| |    || ||| |         |||||||||||||||| ||||||    
T  31941697 ccttactttataagaacaagacaaacttaaagttgcattgaaaattatgtgagagagaatagttggagtatttattgagggtaaagttggaagaaaaaaa 31941598  T
Q  144 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||    
T  31941597 ttaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 31941553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 6462073 - 6462004
Alignment:
Q  119 ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6462073 ggagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagcgacattcattttgaaacaa 6462004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 34096193 - 34096100
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    ||||||||||||||| ||  |||||||||||| ||| |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  34096193 aatgaaataatcattagacttaacacttttactaaattgcccttactttataagaaaaagacaaacttaaagtttcattgaaaattgtgtgaga 34096100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 56556238 - 56556410
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||| |||||||||||||   |||| || ||||||||||||| ||| |  |||| |||||||||||||| ||||| ||||  || |||||||||    
T  56556238 acagattaaggaattgaatgaaat---cattagacataacacttttactaaattatccttgctttataagaaaaatacaaacttaacattacattgaaaa 56556334  T
Q  101 ttatgtgagaaaagatggggagggtaaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    || ||||||| ||             |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  56556335 ttgtgtgagagaa-------------aagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 56556410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 31987430 - 31987306
Alignment:
Q  68 aagaaaaagacaaaattaaagttgcattgaaaattatgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtatt 156  Q
    |||||||||||||| ||||||||||||||||||||||| ||||  |||| ||| |         |||||||||||||||| |||||||||||||||||||    
T  31987430 aagaaaaagacaaatttaaagttgcattgaaaattatgcgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtatt 31987331  T
Q  157 ggaaatgtaaagtgacattcatttt 181  Q
     ||||||||||||||||||||||||    
T  31987330 agaaatgtaaagtgacattcatttt 31987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 28116307 - 28116243
Alignment:
Q  121 agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  28116307 agggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacatttattttgaaa 28116243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 188
Target Start/End: Complemental strand, 35928650 - 35928486
Alignment:
Q  33 gatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatgggg---------agg 123  Q
    |||||| ||||||||| ||| |||| | ||||||||||||||||| ||| ||||| |||||||||||||| ||  ||||| | ||  |         |||    
T  35928650 gatatatcacttttactaaattgccatgactttataagaaaaagataaacttaaaattgcattgaaaattgtgaaagaaacgttgcagtatttattgagg 35928551  T
Q  124 gtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  35928550 gtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgatatttattttgaaacaa 35928486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 19282501 - 19282567
Alignment:
Q  123 ggtaaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19282501 ggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 19282567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 188
Target Start/End: Original strand, 17499732 - 17499874
Alignment:
Q  59 ttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 145  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | |||||    |||| | | |         |||||||||||||||| ||||||||    
T  17499732 ttactttataagaaaaagacaaacttaaagttgcattgaaaattgtatgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaatt 17499831  T
Q  146 aaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||| ||| ||||||||||||||| |||||||||||||||||||    
T  17499832 aaaattgcattggaaatgtaaagcgacattcattttgaaacaa 17499874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 29840139 - 29840070
Alignment:
Q  120 gagggtaaagttggaaggaaaaaa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29840139 gagggtaaagttgggagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 29840070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 42672566 - 42672481
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    ||||||||||||||| || ||||||||||||| ||||| | | |||||||||||||||||||||| ||||||||| ||||||||||    
T  42672566 aatgaaataatcattagacataacacttttactaaactactcatactttataagaaaaagacaaatttaaagttgtattgaaaatt 42672481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 57 - 189
Target Start/End: Complemental strand, 47321284 - 47321138
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatg----tgagaaaagatgggg---------agggtaaagttggaaggaaaaaa 143  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| ||    ||||||||| | | |         |||||||||||||||| ||||||    
T  47321284 ccttactttataagaaaaagacaaccttaaagttgcattgaaaattgtgcgagtgagaaaagttagagtatttattgagggtaaagttggaagaaaaaaa 47321185  T
Q  144 -ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
     |||||||||||||| ||||||||||||||||||||||| |||||||    
T  47321184 attaaagttgtattgaaaatgtaaagtgacattcattttaaaacaaa 47321138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 34124490 - 34124289
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    ||||||||||||||||||| || || |||   |  |||||| |||||| ||| |  ||||||||||||||||||| ||||| ||||||||| ||||||||    
T  34124490 acagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaa 34124391  T
Q  101 ttatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 187  Q
    || |||||||    |||| | | |         |||||||||||||||| ||||||||||||||| |||| |||||||||| |||||||||||| |||||    
T  34124390 ttgtgtgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttaaaaca 34124291  T
Q  188 aa 189  Q
    ||    
T  34124290 aa 34124289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 185
Target Start/End: Original strand, 45903377 - 45903559
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||  ||||||| |||||||||| |           ||||||||||||||||||||||    
T  45903377 agattaagaaatagaatgaaataatcattggatataacgcttttattaaactgctcttactttatta-----------aattaaagttgcattgaaaatt 45903465  T
Q  103 --atgtgagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
      ||| ||||||||   | |         ||| | ||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||    
T  45903466 ggatgagagaaaagtcagagtactttttgaggtttaagttggtagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa 45903559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 51434346 - 51434414
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||| |||||||||||||||||||| ||| ||||||||||| |||||||||||| ||||||    
T  51434346 gagggtaaagtttgaaggaaaaaattaaagttgcattagaaatgtaaagcgacattcattttaaaacaa 51434414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 185
Target Start/End: Complemental strand, 11835295 - 11835105
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    ||||||||||||  ||||||||||| ||| |  ||||||||||||  ||||| ||  || |||||||||||| || ||| ||||||||||||||||||||    
T  11835295 agattaagaaatgaaatgaaataattattaggcataacacttttattaaactacctatagtttataagaaaa-gataaacttaaagttgcattgaaaatt 11835197  T
Q  103 atgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
     ||||||| ||| | |          || |||||| ||| ||| |||||||||||||| ||||  |||||||||||||||||||||||||||    
T  11835196 gtgtgagagaaggttgagtatttattgaaggtaaatttgaaagaaaaaaattaaagttatattaaaaatgtaaagtgacattcattttgaaa 11835105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 30492791 - 30492732
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatt 179  Q
    |||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||    
T  30492791 gagggtaaagttgggagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatt 30492732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 45889702 - 45889559
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt----gagaaaagatgg---------ggagggtaaagttggaaggaaaaaa 143  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||| |||    |||||||| |||          ||||||||||| ||||| |||||     
T  45889702 ccttactttataagaaaaaaacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagtaggaagaaaaaag 45889603  T
Q  144 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||| |||||| ||| |||||||||||||||||||    
T  45889602 ttaaagttgtattgaaaatgt-aagcgacattcattttgaaacaa 45889559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 54233954 - 54233902
Alignment:
Q  58 cttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  54233954 cttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgaga 54233902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 3093539 - 3093433
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    ||||||||||||||||| ||||||||||| || |||||||||| |  ||| || |||| |||||||||||||| | ||| |||||||||||| | |||||    
T  3093539 agattaagaaattgaataaaataatcattagacataacactttcattaaattgtccttcctttataagaaaaa-agaaatttaaagttgcatcggaaatt 3093441  T
Q  103 atgtgaga 110  Q
     |||||||    
T  3093440 gtgtgaga 3093433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 32141163 - 32141280
Alignment:
Q  67 taagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga--tggggagggtaaagttggaaggaaaa-aattaaagttgtattggaaatg 163  Q
    ||||||||||||||| |||||||||||||       ||||||| |||||  ||| ||||||||||||||||| |||| |||||||||||||||  ||||     
T  32141163 taagaaaaagacaaacttaaagttgcatt-------atgtgaggaaagagttggagagggtaaagttggaagaaaaaaaattaaagttgtattcaaaata 32141255  T
Q  164 taaagtgacattcattttgaaacaa 188  Q
    | ||||||| |||||||||||||||    
T  32141256 tgaagtgacgttcattttgaaacaa 32141280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 6510181 - 6510112
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    |||||||||||||  || ||||| |||||||||||||| |||| |||||||||||| |||||||||||||    
T  6510181 gagggtaaagttgagagaaaaaagttaaagttgtattgaaaatataaagtgacatttattttgaaacaaa 6510112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 17317950 - 17317999
Alignment:
Q  138 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 187  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  17317950 aaaaaattaaagttgtattggaaatgtaatgtgacattcagtttgaaaca 17317999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 68 - 189
Target Start/End: Complemental strand, 38692516 - 38692408
Alignment:
Q  68 aagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaa 167  Q
    ||||||||||||||||||||||||||||||||||| || |||| ||             ||||||| || ||||||||||||||  |||| |||||||||    
T  38692516 aagaaaaagacaaaattaaagttgcattgaaaattgtgcgagagaa-------------aagttgggagaaaaaaattaaagtttaattgaaaatgtaaa 38692430  T
Q  168 gtgacattcattttgaaacaaa 189  Q
    |||||||||||||| |||||||    
T  38692429 gtgacattcattttaaaacaaa 38692408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 1868208 - 1868255
Alignment:
Q  141 aaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||    
T  1868208 aaattaaagttgcattgaaaatgtaaagtgacattcattttgaaacaa 1868255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 6232141 - 6232192
Alignment:
Q  138 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    |||||||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  6232141 aaaaaattaaagttgtattgaaaatgtaaattgacatttattttgaaacaaa 6232192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 4408169 - 4408243
Alignment:
Q  36 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    |||||| |||||| ||| |  ||||||| ||||||||||||||||| ||||| |||||||||||||| |||||||    
T  4408169 ataacaattttactaaaataaccttactatataagaaaaagacaaacttaaaattgcattgaaaattgtgtgaga 4408243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 38761788 - 38761898
Alignment:
Q  4 gattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatta 103  Q
    ||||||||||| |||| ||||||| | | || ||||||||||||| |||   |||||||||||| ||| ||||||| | |||||||| | |||||||||     
T  38761788 gattaagaaatagaattaaataattaatagacataacacttttactaaatcacccttactttattagagaaagacacacttaaagttaccttgaaaattg 38761887  T
Q  104 tgtgagaaaag 114  Q
    || ||||||||    
T  38761888 tgagagaaaag 38761898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 29289852 - 29289959
Alignment:
Q  6 ttaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaa---agacaaaattaaagttgcattgaaaatt 102  Q
    ||||||||| |||||||||||||||| || |||| | |||||  |||  ||| ||||||||||| ||||   ||||||| ||||| ||||||||||||||    
T  29289852 ttaagaaatggaatgaaataatcattagacataatatttttaataaatcgcctttactttataaaaaaaaaaagacaaacttaaaattgcattgaaaatt 29289951  T
Q  103 atgtgaga 110  Q
     |||||||    
T  29289952 gtgtgaga 29289959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 44835398 - 44835341
Alignment:
Q  120 gagggtaaagtt-ggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattc 176  Q
    |||||||||||| ||||| ||||||||||||||||||| |||||||||||||| ||||    
T  44835398 gagggtaaagtttggaagaaaaaaattaaagttgtattcgaaatgtaaagtgatattc 44835341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 51737285 - 51737367
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagt 89  Q
    |||||| ||| |||||||||||| ||| || ||||||||||||| ||| | ||||||||||||  |||||||||||| |||||||    
T  51737285 attaaggaatagaatgaaataataattagacataacacttttactaaattacccttactttat--gaaaaagacaaacttaaagt 51737367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 54233900 - 54233844
Alignment:
Q  128 agttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    ||||||||| |||||||||||||||||||| |||||||||| | ||||||||||||||    
T  54233900 agttggaag-aaaaaattaaagttgtattgaaaatgtaaagcggcattcattttgaaa 54233844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 54092021 - 54091953
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||  || |||||||||||||||||||  |||| |||| ||||||||||||| ||||||    
T  54092021 gagggtaaagttgagagaaaaaaattaaagttgtattaaaaatctaaattgacattcattttaaaacaa 54091953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 6231702 - 6231652
Alignment:
Q  138 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||||||| |  |||| |||||||||||||||||||||||||    
T  6231702 aaaaaattaaagttgtactataaatataaagtgacattcattttgaaacaa 6231652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 29289982 - 29290040
Alignment:
Q  123 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
    ||||||||| |||| |||||||| ||||||||||| |||| |||||||||||| |||||    
T  29289982 ggtaaagtttgaagaaaaaaattgaagttgtattgaaaatataaagtgacattaatttt 29290040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 188
Target Start/End: Original strand, 4408286 - 4408335
Alignment:
Q  139 aaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||| ||||  ||||||||| |||||||||||||||||||    
T  4408286 aaaaattaaagttgcattgagaatgtaaagcgacattcattttgaaacaa 4408335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 34096079 - 34096010
Alignment:
Q  120 gagggtaaagttggaaggaaaaaa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||| ||  |||||| ||||| ||||||| |||||||||| |||||||| |||||||||||    
T  34096079 gagggtaaagttgaaaaaaaaaaaattaaaattgtattagaaatgtaaattgacattcgttttgaaacaa 34096010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 51434270 - 51434315
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||||||||||||||||| || || |||||||||||||||||    
T  51434270 ccttactttataagaaaaagactaactttaagttgcattgaaaatt 51434315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 55126559 - 55126494
Alignment:
Q  121 agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 186  Q
    |||||| |||| ||||  ||||||||||||||||||| |||| |||| ||||||||||||| ||||    
T  55126559 agggtagagttagaagagaaaaattaaagttgtattgaaaatttaaaatgacattcattttaaaac 55126494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 55548313 - 55548380
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||| ||||||||||  || |||||||||||| |||| ||||||||||||||| | ||||||||||||    
T  55548313 gagggcaaagttggaaa-aagaaattaaagttgcattgaaaatgtaaagtgacacttattttgaaacaa 55548380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 6462153 - 6462102
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtga 108  Q
    |||||||||||||||| || ||||| |||||||||||||||| ||| |||||    
T  6462153 ccttactttataagaacaaaacaaacttaaagttgcattgaatattgtgtga 6462102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 28116384 - 28116334
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtg 107  Q
    |||||||||||||||| |||||||| |||||||| || |||||||| ||||    
T  28116384 ccttactttataagaataagacaaacttaaagttacactgaaaattgtgtg 28116334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 30492909 - 30492828
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcatt 95  Q
    |||||| ||| |||||||||||||||| || |||||||||||||  ||||||||         |||||||||||||| |||||||||||||    
T  30492909 attaaggaatggaatgaaataatcattagacataacacttttactgaactgccc---------aagaaaaagacaaacttaaagttgcatt 30492828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 34534111 - 34534157
Alignment:
Q  63 tttataagaaaaagacaaaatt-aaagttgcattgaaaattatgtga 108  Q
    ||||||||||||||||||| || |||||||||||||||||| |||||    
T  34534111 tttataagaaaaagacaaacttaaaagttgcattgaaaattgtgtga 34534157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 55126636 - 55126591
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||||||||||| |||||||| |||||||||||  |||||||    
T  55126636 ccttactttataagaataagacaaacttaaagttgcaaggaaaatt 55126591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17317806 - 17317886
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaa 81  Q
    ||||||||| ||||  ||| ||||||||||| || ||  | ||||||| ||||| | ||||||||||||||||| ||||||    
T  17317806 acagattaaaaaataaaataaaataatcattagacattgctcttttactaaactacgcttactttataagaaaaggacaaa 17317886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 2e-63; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 2 - 189
Target Start/End: Original strand, 29795156 - 29795345
Alignment:
Q  2 cagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaat 101  Q
    ||||||||  ||| |||||||||||||||| || |||| |||||||| |||||||||||| ||||||||||||||||||  |||||||||||||||||||    
T  29795156 cagattaatgaatggaatgaaataatcattagacataatacttttactaaactgcccttattttataagaaaaagacaactttaaagttgcattgaaaat 29795255  T
Q  102 tatgtga--gaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    | |||||  |||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29795256 tgtgtgaaagaaaagttggagagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 29795345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 40410639 - 40410473
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||||||| |||||| |||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40410639 acagattaagaaatggaatgacataatcattggatataacgcttttattaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 40410540  T
Q  101 ttatgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgta 165  Q
    || |||  |||||||| ||| |||||||||||||| || ||||||||||||||||||||||||||||    
T  40410539 ttgtgtcagagaaaagttggagagggtaaagttgggagaaaaaaattaaagttgtattggaaatgta 40410473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 17 - 181
Target Start/End: Original strand, 40987254 - 40987418
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagat 116  Q
    ||||||||||||||| || ||||||||||||| ||| || ||||||||||||||||||||| ||| |||||||||||||||||||| || |||||||| |    
T  40987254 aatgaaataatcattagacataacacttttactaaattgtccttactttataagaaaaagataaatttaaagttgcattgaaaattgtgagagaaaagtt 40987353  T
Q  117 ggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
    || ||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  40987354 ggagagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagcgacattcatttt 40987418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 4840687 - 4840881
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    |||||||||| |||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  4840687 attaagaaatggaatgaaataatcattggatataacgtttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaactgt 4840786  T
Q  105 gt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||  |||||||| | |          ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4840787 gtgggagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttggaacaa 4840881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 1381916 - 1381748
Alignment:
Q  20 gaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggg 119  Q
    |||||||||||| || ||||||||||||| ||||||| |||||||||||||||||||| ||| ||||| |||||||||||||| || |||||||| |||     
T  1381916 gaaataatcattagacataacacttttactaaactgctcttactttataagaaaaagaaaaacttaaaattgcattgaaaattgtgagagaaaagttgga 1381817  T
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    || |||||||||||||| ||||||| |||||| ||||||||||||||||| ||||||||||| ||||||    
T  1381816 gaaggtaaagttggaagaaaaaaatcaaagttatattggaaatgtaaagtaacattcattttaaaacaa 1381748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 7743597 - 7743401
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||  |||| ||||||||||||||  |||||||||||||||| ||  |||||||||||||||||||||||||||| ||||||||||||||||||    
T  7743597 acagattaaagaattaaatgaaataatcatcagatataacacttttactaagttgcccttactttataagaaaaagacaaatttaaagttgcattgaaaa 7743498  T
Q  101 ttatgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 186  Q
    || |||  |||||||| |||          ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  7743497 ttgtgtgagagaaaagttggactatttattgagggtaaagttggaagaaaaagattaaagttgtattggaaatgtaaagtgacattcattttaaaac 7743401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 185
Target Start/End: Original strand, 1298738 - 1298931
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    ||||||||||||  |||||||||||||||| |||||||  |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1298738 agattaagaaataaaatgaaataatcattgaatataacgtttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 1298837  T
Q  103 atgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    ||||  |||||||| |||          |||| ||||||| || |  |||||||||||||||||| ||||||||||||||||||||||||||||    
T  1298838 atgtgagagaaaagttggagaatttattgaggataaagttcgatgagaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaa 1298931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 4766184 - 4766341
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagat 116  Q
    ||||||||||||||||||||||||  | |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||          
T  4766184 aatgaaataatcattggatataacgttattactaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga------ 4766277  T
Q  117 ggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 187  Q
           | ||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  4766278 -------gaaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaattgacattcattttgaaaca 4766341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 14378219 - 14378371
Alignment:
Q  16 gaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga 115  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||         
T  14378219 gaatgaaataatcatttaatataacacttttactaaactgcccttactttataagaaaaagataaatttaaagttgcattgaaaattatgcgaga----- 14378313  T
Q  116 tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
            | |||||||| || |||||||||||||||||||| |||||||||||||||||||||||    
T  14378314 --------gaaaagttgggagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 14378371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 183
Target Start/End: Original strand, 36360347 - 36360522
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaag-- 114  Q
    ||||||||||||||| || ||||||||||||| |||||||||||| ||||||||||||||| ||| ||||||||| |||||||||| |||||||||||      
T  36360347 aatgaaataatcattagacataacacttttactaaactgcccttattttataagaaaaagataaacttaaagttgtattgaaaattgtgtgagaaaagtt 36360446  T
Q  115 -------atggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 183  Q
           ||   ||||||||||||| ||| |||||||||||||||||||| ||||| ||||||| |||||||||||    
T  36360447 tgagtatatattgagggtaaagttgaaagaaaaaaattaaagttgtattgaaaatgcaaagtgatattcattttga 36360522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 3 - 188
Target Start/End: Complemental strand, 34225944 - 34225771
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||| |||  ||||||||||||||| || |||| | |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34225944 agattaaggaatgaaatgaaataatcattagacataataattttactaaattgcccttactttataagaaaaagacaaacttaaagttgcattgaaaatt 34225845  T
Q  103 atgtgagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
     |||||||             | |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34225844 gtgtgaga-------------gaaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 34225771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 43460961 - 43460860
Alignment:
Q  6 ttaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatg 105  Q
    ||||||||| |||||||||||||||||||||   ||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  43460961 ttaagaaatggaatgaaataatcattggata---cacttttactaaactgcccttactttataaggaaaagacaaaattaaagttgtattgaaaattatg 43460865  T
Q  106 tgaga 110  Q
    |||||    
T  43460864 tgaga 43460860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 17 - 188
Target Start/End: Complemental strand, 4536742 - 4536572
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaa---a 113  Q
    ||||||||||||||| || ||| ||||||||| |||||||||         |||||||||||||| |||||||||||||||||||| |||||||||   |    
T  4536742 aatgaaataatcattagacatatcacttttactaaactgccc---------aagaaaaagacaaatttaaagttgcattgaaaattgtgtgagaaagtta 4536652  T
Q  114 ga-----tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||     ||  |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4536651 gagtatttgttgagggtaaagttgggagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 4536572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 189
Target Start/End: Complemental strand, 24775373 - 24775186
Alignment:
Q  13 attgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt--gaga 110  Q
    ||||||||||||||||||| |||||||||||||||| ||| ||| |||||||||||||||||| ||||| ||||||||  |||||||||| |||  ||||    
T  24775373 attgaatgaaataatcattagatataacacttttactaaaatgctcttactttataagaaaaaaacaaacttaaagttatattgaaaattgtgtgagaga 24775274  T
Q  111 aaagatg---------gggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    |||| ||           ||||||||| |||| || ||||||||||| |||||||| ||||||||||||||| ||||||| |||||||    
T  24775273 aaagttgaagtatttattgagggtaaacttgggagaaaaaaattaaaattgtattgaaaatgtaaagtgacaatcattttaaaacaaa 24775186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 43388613 - 43388812
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    ||||||||||||||||||| || || |||   |  |||||| |||||| ||| |  ||||||||||||||||||| ||||| ||||||||| ||||||||    
T  43388613 acagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaa 43388712  T
Q  101 ttatgtgagaaaaga---tggg--------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    |||||||||| || |   || |        ||||||||||||||||| ||||||||||||||| |||| |||||||||| ||||||||||||||||||||    
T  43388713 ttatgtgagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaacaaa 43388812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 185
Target Start/End: Complemental strand, 16316863 - 16316710
Alignment:
Q  43 ttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgag--aaaagatgg---------ggagggtaaagtt 131  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||  ||||| |||          ||  ||||| ||    
T  16316863 ttttactaaattgcccttactgtataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagataaaagttggaatatttattgaaagtaaattt 16316764  T
Q  132 ggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||| |||||||    
T  16316763 ggaagaaaaaaattaaagttgtattggaaatataaagtgacattcaatttgaaa 16316710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 33093434 - 33093365
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33093434 gagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaaa 33093365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 37107056 - 37106886
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataag--aaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||||| |||||||||||| ||| || | ||||||||||| ||| |||||||||||||||||  ||||||| ||| ||||||||||||||||||||    
T  37107056 attaagaaatggaatgaaataattatttgacacaacacttttactaaattgcccttactttataagcaaaaaagaaaaacttaaagttgcattgaaaatt 37106957  T
Q  103 atgt--gagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaat 162  Q
     |||  |||||||| ||| |         |||||||||||||||| |||||||||||||||||||| ||||    
T  37106956 gtgtgagagaaaagttggagtatttattaagggtaaagttggaagaaaaaaattaaagttgtattgaaaat 37106886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 181
Target Start/End: Complemental strand, 42970069 - 42969904
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga- 115  Q
    ||||||||||| ||| ||  |||||||||||| || |||| |||| ||||||| |||| || ||  |||||||||||||||||||| |||||||||| |     
T  42970069 aatgaaataattattagacgtaacacttttactaa-ctgctcttattttataaaaaaatgataaccttaaagttgcattgaaaattgtgtgagaaaaaag 42969971  T
Q  116 -tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
     |||||| |||||| || |||| ||||||||||||| |||||  ||||||||||||||||| |||||    
T  42969970 ttggggaaggtaaaattagaagaaaaaaattaaagtggtattaaaaatgtaaagtgacatttatttt 42969904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 14698130 - 14698010
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtatt 156  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||| |           | ||||||||||| ||||||||||||||| |||    
T  14698130 ccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagaga-----------gaaaagttggaagaaaaaaattaaagttgcatt 14698042  T
Q  157 ggaaatgtaaagtgacattcattttgaaacaa 188  Q
    | |||||||||| |||||||||||||||||||    
T  14698041 gaaaatgtaaagcgacattcattttgaaacaa 14698010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 188
Target Start/End: Original strand, 43344195 - 43344375
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagat 116  Q
    ||||||||||||||| || |||||| |||||  ||||  |||||||||||||||||||||| ||  ||||||||| |||||||||||||||||| || |     
T  43344195 aatgaaataatcattagacataacaattttattaaaccacccttactttataagaaaaagataagtttaaagttgtattgaaaattatgtgagagaaaaa 43344294  T
Q  117 ggggag-----------ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
       |||           ||||||||||||||  ||||||||||||||||||| |||| ||| |||||||||||||||||||||    
T  43344295 ttagagtatttattaaaggtaaagttggaag--aaaaattaaagttgtattgaaaatataaggtgacattcattttgaaacaa 43344375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 1360243 - 1360175
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||| |||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1360243 gagggtaaaattgggagaaaaaaattaaagttgtattggaaatgcaaagtgacattcattttgaaacaa 1360175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 2459839 - 2459771
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||| ||||||    
T  2459839 gagggtaaagttggaagaaaaaaattaaagttgcattggaaatgtaaagcgacattcattttaaaacaa 2459771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 10580944 - 10581012
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||||||| |||||||||||||||||||| |||| |||||||| ||||||||||||||||    
T  10580944 gagggtaaagttggaagaaaaaaattaaagttgtattgaaaatataaagtgatattcattttgaaacaa 10581012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 18374850 - 18374918
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||    
T  18374850 gagggtaaagttggaagaaaaaaattaaaattatattggaaatgtaaagtgacattcattttcaaacaa 18374918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 41984561 - 41984416
Alignment:
Q  57 ccttactttataagaaaaagacaaaa-ttaaagttgcattgaaaattatgtg----agaaaagatgggg---------agggtaaagttggaaggaaaaa 142  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||| ||||    ||||||| ||| |         | |||||||||||||| |||||    
T  41984561 ccttactttataagaataagacaaaacttaaagttgcattgaaaattgtgtgtgagagaaaagttggagtatttattaaaggtaaagttggaagaaaaaa 41984462  T
Q  143 attaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||||| |||||||||| || ||| ||||||||||||    
T  41984461 attaaagttgtattgaaaatgtaaagcgatatttattttgaaacaa 41984416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 775972 - 776039
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||| |||| ||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  775972 gagggtaaagttagaag-aaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 776039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 39866762 - 39866820
Alignment:
Q  123 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
    |||||||||||||| ||||||||||| ||| ||||||||||||||| ||||||||||||    
T  39866762 ggtaaagttggaagaaaaaaattaaatttgcattggaaatgtaaagcgacattcatttt 39866820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 25332636 - 25332568
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||||| | ||| ||||||||||||||||    
T  25332636 gaggataaagttggaag-aaaaaattaaagttgcattggaaatgtaaggcgacgttcattttgaaacaaa 25332568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 11171935 - 11171839
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaat 101  Q
    ||||||||||||||| ||||||||| | || ||||||||||||| ||| |  ||| |||||||  |||||||||||| |||||||| ||||| ||||    
T  11171935 attaagaaattgaataaaataatcaatagacataacacttttactaaattatcctaactttatgcgaaaaagacaaacttaaagttacattggaaat 11171839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 187
Target Start/End: Complemental strand, 14511526 - 14511459
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 187  Q
    |||| ||||||| | ||||||||||||| ||||||||  |||||||||| ||||||||||||||||||    
T  14511526 gaggataaagtttggaggaaaaaattaatgttgtattcaaaatgtaaagagacattcattttgaaaca 14511459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 45148055 - 45148106
Alignment:
Q  137 gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  45148055 gaaaaaattaaagttttattgaaaatgtaaagtgacattcattttaaaacaa 45148106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 775875 - 775941
Alignment:
Q  36 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||| |||||| ||| |  ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  775875 ataacaattttactaaaataaccttaatttataagaaaaagacaaacttaaagttgcattgaaaatt 775941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 4566112 - 4566186
Alignment:
Q  36 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    |||||| |||||| ||| |  ||||| ||||||||||||||| ||| |||||||||||||||||||| |||||||    
T  4566112 ataacaattttactaaaataaccttattttataagaaaaagataaatttaaagttgcattgaaaattgtgtgaga 4566186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 6592013 - 6591963
Alignment:
Q  138 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  6592013 aaaaaattaaagttgtattggaaatgtaaaatgatattcattttaaaacaa 6591963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 44228659 - 44228609
Alignment:
Q  4 gattaagaaattgaatgaaataatcattggatataacacttttaccaaact 54  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| |||||    
T  44228659 gattaaaaaatggaatgaaataatcattagatataacacttttactaaact 44228609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 2459915 - 2459862
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    ||||| |||||||||| | |||||| |||||||||||||||||||| |||||||    
T  2459915 ccttattttataagaataggacaaacttaaagttgcattgaaaattgtgtgaga 2459862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 25332712 - 25332667
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  25332712 ccttactttataagaaaaagacaaacttagagttgtattgaaaatt 25332667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 45372645 - 45372686
Alignment:
Q  147 aagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||| ||||||||||||||||||||||| ||||||    
T  45372645 aagttgtattgaaaatgtaaagtgacattcattttaaaacaa 45372686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 43460839 - 43460792
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaa 167  Q
    |||||||| ||||||||  |||| ||||||||||||||||||||||||    
T  43460839 gagggtaacgttggaagagaaaacttaaagttgtattggaaatgtaaa 43460792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 1360306 - 1360272
Alignment:
Q  68 aagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||||||||| ||||||||||||||||||||    
T  1360306 aagaaaaagacaaacttaaagttgcattgaaaatt 1360272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 4566214 - 4566263
Alignment:
Q  125 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacat 174  Q
    |||||||| ||  |||||||||||||||||||  ||||||||||||||||    
T  4566214 taaagttgaaaaaaaaaaattaaagttgtattaaaaatgtaaagtgacat 4566263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 19506018 - 19505974
Alignment:
Q  144 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    ||||||||||||||| ||| |||||||||||| |||||||||||||    
T  19506018 ttaaagttgtattgggaat-taaagtgacatttattttgaaacaaa 19505974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 10580869 - 10580913
Alignment:
Q  58 cttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    ||||||||||||||| |||||||  ||||||||| ||||||||||    
T  10580869 cttactttataagaacaagacaatcttaaagttgtattgaaaatt 10580913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 33093510 - 33093458
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgag 109  Q
    ||||||||||||| |  |||| ||| |||||||||||||||||||| ||||||    
T  33093510 ccttactttataacatcaagataaacttaaagttgcattgaaaattgtgtgag 33093458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 6e-61; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 28044101 - 28044286
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    ||||||||||  ||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  28044101 attaagaaataaaatgaaataatcattggatataacgtttttactaaactgcccttactttataagaaaaagacaaaattaaagttgtattgaaaattgt 28044200  T
Q  105 gt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||  |||||||  ||| |||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  28044201 gtgagagaaaaattggagaggataaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 28044286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 36447567 - 36447757
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||||||| |||||||||||| | |||||||||| ||||||  |||||| | ||||||||||||||||||| ||||||||||||| ||||||||    
T  36447567 acagattaagaaatggaatgaaataattactggatataactcttttattaaactgtctttactttataagaaaaagataaaattaaagttgaattgaaaa 36447666  T
Q  101 ttatgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    ||||||  |||||||| |||  |||||||||||||||| |||||||||||||||||||| |||| |||||||| ||||||||| |||||||    
T  36447667 ttatgtgagagaaaagttggaaagggtaaagttggaagaaaaaaattaaagttgtattgaaaatataaagtgatattcattttaaaacaaa 36447757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 18886842 - 18886667
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    ||||| |||||||| |||||||||||||||| |||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18886842 acagactaagaaatggaatgaaataatcattagatataacgcttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaaa 18886743  T
Q  101 ttatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    || ||||   |||||          ||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||| |||||||    
T  18886742 ttgtgtg---aaaga----------aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgagattcattttaaaacaaa 18886667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 32275388 - 32275203
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    ||||||||||  |||||||||||||||  | || ||  |||||| |||||||| |||||||||||||||||  |||| |||||||||||||||||||| |    
T  32275388 attaagaaatgaaatgaaataatcattaaacatgacgtttttactaaactgcctttactttataagaaaaaatcaaacttaaagttgcattgaaaattgt 32275289  T
Q  105 gtga--gaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||  |||||| | | ||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  32275288 gtgaaggaaaagtttgagagggtaaagttggaagaaaaaaattaaagttgtattagaaatgtaaagtggcattcattttgaaacaa 32275203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 41905891 - 41906089
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    ||||||||||||||  | |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41905891 acagattaagaaatgaactgaaataatcattggatataacgcttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 41905990  T
Q  101 ttatgt--gagaaaagatgggg--------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    || |||  |||||||| ||| |          ||||||||||||||  |||| ||||||||||||| |||||||||||||||||| ||||| |||||||    
T  41905991 ttgtgtaagagaaaagttggagtatttattgaggtaaagttggaagagaaaacttaaagttgtattagaaatgtaaagtgacatttattttaaaacaaa 41906089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 182
Target Start/End: Original strand, 22627313 - 22627495
Alignment:
Q  4 gattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatta 103  Q
    ||||||| |||  |||||||||||| ||  | ||||||| ||||| |||||||| ||||||||||| || |||||||| ||||||||||||||||||||     
T  22627313 gattaaggaatgaaatgaaataatcgttaaacataacacatttactaaactgcctttactttataaaaataagacaaacttaaagttgcattgaaaattg 22627412  T
Q  104 tgt--gagaaaagatggggagggtaaagttggaag--gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttg 182  Q
    |||  |||||||| ||| |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  22627413 tgtgagagaaaagttggagagggtaaagttggaagaaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttg 22627495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 42121739 - 42121549
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||| |||  ||| ||||||||||| || ||| ||||||||| |||||| ||||||||||| ||||||||| | | ||||||||||||||||||    
T  42121739 acagattaaggaatgaaatcaaataatcattagacatatcacttttactaaactgaccttactttattagaaaaagatacacttaaagttgcattgaaaa 42121640  T
Q  101 t--tatgtgagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |  | || |||||||| ||| ||| |||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  42121639 ttgtttgagagaaaagttggagagagtaaagttggaagaaaaaaaattaaagttgtattggaaatataaagtgacattcattttgaaacaa 42121549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 34002088 - 34002277
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgccctt-actttataagaaaaagacaaaattaaagttgcattgaaa 99  Q
    ||||||||||||||  |||||||||||||||||||||||||| ||| | ||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  34002088 acagattaagaaatgaaatgaaataatcattggatataacacctttgctaaactgcactttactttataagaaaaagacaaaattaaagttgcattgaaa 34002187  T
Q  100 attatgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcat 178  Q
    ||| |||  |||||||| |||          ||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||    
T  34002188 attgtgtgagagaaaagttggagtatttattgagggtaaagttggaagaataaaattaaacttgtattggaaatgtaaagtgacattcat 34002277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 17869434 - 17869235
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||| |||  ||||||||||||||| || ||||||||||||  ||| || | ||||||||||||||||| ||||| ||||||||||||||||||    
T  17869434 acagattaaggaatgaaatgaaataatcattagacataacacttttattaaattgtctttactttataagaaaaatacaaacttaaagttgcattgaaaa 17869335  T
Q  101 ttatgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    || |||||||  |||||| | |         ||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  17869334 ttgtgtgagagaaaagattgagtatttattgaggataaagttggaaggaaaaaattaaagttgcattggaaatgtaaaatgacattcattttgaaacaaa 17869235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 3680879 - 3681077
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    ||||||||| |||| |||||||||||||||| || |||| |||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||||    
T  3680879 acagattaaaaaatggaatgaaataatcattagacataaaacttttactaaactgctcttactttataagaaaaagacaaatttaaagttgcatttaaaa 3680978  T
Q  101 ttatgt--gagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    || |||  |||||||| | | |         | |||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  3680979 ttctgtgagagaaaagttagtgtatttattaatggtaaagttggaagaacaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 3681077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 189
Target Start/End: Original strand, 33056242 - 33056433
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttacttta-taagaaaaagacaaaattaaagttgcattgaaaat 101  Q
    |||||||| |||  |||||||||||||||  | ||||||||||||| ||||||||||||||||| ||||||||||||||| |||||  ||||||||||||    
T  33056242 agattaaggaatgaaatgaaataatcattaaacataacacttttactaaactgcccttactttattaagaaaaagacaaatttaaaactgcattgaaaat 33056341  T
Q  102 tatgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaa---tgtaaagtgacattcattttgaaacaaa 189  Q
    | |||  |||||||| ||| |||| ||||||| ||| |||||||||||||||||||||||||   |||||| ||||||| |||||||||||||    
T  33056342 tgtgtgagagaaaagttggagaggataaagtt-gaaagaaaaaattaaagttgtattggaaatgttgtaaaatgacatttattttgaaacaaa 33056433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 34 - 184
Target Start/End: Original strand, 40207379 - 40207528
Alignment:
Q  34 atataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggggagggtaaagttgg 133  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||| ||||| |||||||||||||| || | |||||| ||  |||| ||||||||     
T  40207379 atataacacttttactaaactgcccttactttataagaaaatgacaaacttaaaattgcattgaaaattgtgag-gaaaagttgaagaggataaagttga 40207477  T
Q  134 aaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaa 184  Q
    ||| |||||||||||||||||||  |||| |||| ||||||||||||||||    
T  40207478 aagaaaaaaattaaagttgtattaaaaatataaaatgacattcattttgaa 40207528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 1103681 - 1103482
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    ||||||||||||||  |||||||||||||   || | |||| |||||| ||||| |||||||||||||| ||||| ||||| |||||||| |||||||||    
T  1103681 acagattaagaaataaaatgaaataatcaccagacaaaacatttttactaaactacccttactttataaaaaaaaaacaaatttaaagttacattgaaaa 1103582  T
Q  101 ttatgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    || |||||||  |||| ||  |         |||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  1103581 ttgtgtgagagaaaagttgaagtatttattgagggtaaagttggaagaaaacaattaaagttgtattggaaatgtaaaatgacattcattttgaaacaaa 1103482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 34733500 - 34733394
Alignment:
Q  7 taagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt 106  Q
    ||||||||  ||||||||||||||| || ||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||     
T  34733500 taagaaatgaaatgaaataatcattagacataacacttttactaaactacccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtga 34733401  T
Q  107 gagaaaa 113  Q
    |||||||    
T  34733400 gagaaaa 34733394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 188
Target Start/End: Original strand, 42259521 - 42259702
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgag--aaaag 114  Q
    ||||| ||||| ||| || ||||||||||||| ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||    
T  42259521 aatgagataattattagacataacacttttactaaaatgcccttactttataagaaaaagacaagcttaaagttgcattgaaaattatgtgagacaaaag 42259620  T
Q  115 atgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
     | |          |||||||||||||||| ||||||||||||||||||||| ||| ||||| | ||||||||||| ||||||    
T  42259621 tttgagtatttattgagggtaaagttggaa-gaaaaaattaaagttgtattgaaaacgtaaaataacattcattttaaaacaa 42259702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 188
Target Start/End: Complemental strand, 26963643 - 26963478
Alignment:
Q  36 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt----gagaaaagatgg---------ggag 122  Q
    |||||| |||||| ||| |  ||||||||||||||||||||||||| ||||||||||||||||||||||||    |||||||| |||          |||    
T  26963643 ataacaattttactaaaataaccttactttataagaaaaagacaaacttaaagttgcattgaaaattatgtgagagagaaaagttggagtattcattgag 26963544  T
Q  123 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  |||||| ||||||||||||    
T  26963543 ggtaaagttggaagaaaaaaattaaagttgcattggaaatgtaaatagacatttattttgaaacaa 26963478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 188
Target Start/End: Complemental strand, 40299019 - 40298846
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga--aaag 114  Q
    ||||||||||| |||||| ||||||||||||| |||||||||         |||||||||||||| |||||||| ||||||||||| |||||||  ||||    
T  40299019 aatgaaataataattggacataacacttttactaaactgccc---------aagaaaaagacaaacttaaagttacattgaaaattgtgtgagagaaaag 40298929  T
Q  115 atgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
     ||| |         ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40298928 ttggagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 40298846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 32345790 - 32345991
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    ||||||||||||||||||| || || |||   |  |||||| |||||| ||| |  ||||||||||||||||||| ||||| ||||||||| ||||||||    
T  32345790 acagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaa 32345889  T
Q  101 ttatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 187  Q
    || |||||||    |||| ||| |         |||||||||||||||| ||||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  32345890 ttgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaaca 32345989  T
Q  188 aa 189  Q
    ||    
T  32345990 aa 32345991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 19906555 - 19906413
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga--aaagatggg---------gagggtaaagttggaaggaaaaaatt 145  Q
    |||||||||||| ||| |||||||| |||||||||||||||||||| || ||||  |||| |||          ||||||||||||||||| |||||||     
T  19906555 ccttactttataggaacaagacaaacttaaagttgcattgaaaattgtgagagagaaaagttggaatatttattgagggtaaagttggaagaaaaaaata 19906456  T
Q  146 aaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  19906455 aaagttgtattggaaatgtaaagcgacattcattttgaaacaa 19906413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 181
Target Start/End: Original strand, 26527356 - 26527544
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||||||| ||||| |||||||||| || ||||||| ||||| |||||||  ||||||||||||||||| | ||| ||||||||||||||||||||    
T  26527356 agattaagaaatggaatgcaataatcattagacataacacctttactaaactgcttttactttataagaaaaa-aaaaatttaaagttgcattgaaaatt 26527454  T
Q  103 atgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
    || |   ||||||| |||          |||| ||||||| |||| |||||||||||||||||||| ||||||||| | |||||||||||    
T  26527455 atttaacagaaaagttggagtatttattgaggttaaagttagaagaaaaaaattaaagttgtattgaaaatgtaaaataacattcatttt 26527544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 30515037 - 30514972
Alignment:
Q  123 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30515037 ggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcattttgaaacaa 30514972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 43813431 - 43813500
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  43813431 gagggtaaagttggaagaaaaaaattaaagttgtattggaaatataaagtgacattcattttaaaacaaa 43813500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 36836123 - 36836057
Alignment:
Q  123 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    |||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  36836123 ggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagcgacattcattttgaaacaaa 36836057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 19288434 - 19288499
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    |||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19288434 gagggtaaagttagaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaa 19288499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 22597297 - 22597228
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    |||| |||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22597297 gaggttaaagttgaaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaaa 22597228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 42044066 - 42044131
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  42044066 gagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattaattttgaaa 42044131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 31416838 - 31416906
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||| ||||||    
T  31416838 gagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgatattcattttaaaacaa 31416906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 19920358 - 19920419
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
    |||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||    
T  19920358 gagggtaaagttgagagaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 19920419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 42010553 - 42010632
Alignment:
Q  23 ataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    ||||||||| || |||| | |||||| |||||||||||| ||||||||||||||||||| |||||||| |||||||||||    
T  42010553 ataatcattagacataatatttttactaaactgcccttattttataagaaaaagacaaacttaaagttacattgaaaatt 42010632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 18733502 - 18733452
Alignment:
Q  138 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18733502 aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 18733452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 188
Target Start/End: Original strand, 36447083 - 36447225
Alignment:
Q  59 ttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 145  Q
    |||||||||||||| |||||||  |||||||||||||||||||| |||||||    |||| ||| |         ||| ||||||||||||  |||||||    
T  36447083 ttactttataagaataagacaagcttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttaatgaggataaagttggaagagaaaaatt 36447182  T
Q  146 aaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||| |||||||| ||||||||| ||||||||||||||||||||    
T  36447183 aaaattgtattgaaaatgtaaaatgacattcattttgaaacaa 36447225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 183
Target Start/End: Original strand, 39117479 - 39117638
Alignment:
Q  36 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga---aaagatgg---------ggagg 123  Q
    |||||| |||||| ||| |  |||||||||||||||| |||||||| |||||||||||||||||||| |||||||   |||  |||          ||||    
T  39117479 ataacaattttactaaaataaccttactttataagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaattggagtattcattgagg 39117578  T
Q  124 gtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 183  Q
    |||| |||||||| ||| |||||||||||||||| |||||||||  ||||||||||||||    
T  39117579 gtaatgttggaagaaaataattaaagttgtattgaaaatgtaaaacgacattcattttga 39117638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 5723069 - 5723006
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaa 184  Q
    |||||||||||| | || |||||||||||||||||||| ||||||||||||||||||||||||||    
T  5723069 gagggtaaagttaggag-aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaa 5723006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 10684918 - 10684986
Alignment:
Q  121 agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    |||||||||||||||| ||||||||||||||| |||| ||||||||||   ||||||||||||||||||    
T  10684918 agggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcagcattcattttgaaacaaa 10684986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 10684820 - 10684894
Alignment:
Q  36 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    |||||| |||||| ||| |  ||||||||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  10684820 ataacaattttactaaaataaccttactttataagaaaaagacaaacttaaagttgaattgaaaattgtgtgaga 10684894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 48838652 - 48838750
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaa-----aaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    ||||||||||||||| || |||||| || ||| |||||| ||||||||||||| ||     ||||||||| |||||||||||||||||||| |||||||    
T  48838652 aatgaaataatcattagacataacatttatactaaactgaccttactttataaaaataaaaaaagacaaatttaaagttgcattgaaaattgtgtgaga 48838750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 32873268 - 32873319
Alignment:
Q  138 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  32873268 aaaaaattaaaattgtattggaaatataaagtgacattcattttaaaacaaa 32873319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 30833066 - 30833241
Alignment:
Q  16 gaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga 115  Q
    |||||||||||| ||| |||||||||||||||| ||| || | ||  |||||| |||||||||||| ||| |||| || |||||||| |||||||||| |    
T  30833066 gaatgaaataattattagatataacacttttactaaattgtc-ttgttttatatgaaaaagacaaacttagagttacactgaaaattgtgtgagaaaaaa 30833164  T
Q  116 tggggag-----------ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
       ||||           |||||||||| ||| ||||||| |||||||||||| ||||||||| ||| |||||||||    
T  30833165 gttggagtatttattgaaggtaaagttgaaagaaaaaaataaaagttgtattgaaaatgtaaaatgatattcatttt 30833241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 6521960 - 6521907
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||||| |||||||    
T  6521960 ccttactttataagaaaaagacaaacttaaaattgtattgaaaattgtgtgaga 6521907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 19277057 - 19277110
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    |||||||||||| ||| |||||||| |||||||||||||||||||| |||||||    
T  19277057 ccttactttatatgaacaagacaaacttaaagttgcattgaaaattgtgtgaga 19277110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 47272313 - 47272240
Alignment:
Q  36 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgag 109  Q
    |||||| |||||| |||||||||||  |||||| ||||||||||||  |||| |||||||||||||| ||||||    
T  47272313 ataacaattttactaaactgcccttgttttatatgaaaaagacaaacataaaattgcattgaaaattgtgtgag 47272240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 31416763 - 31416815
Alignment:
Q  58 cttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    |||| |||||||||| |||||||| |||||||||||||||||||| |||||||    
T  31416763 cttattttataagaacaagacaaatttaaagttgcattgaaaattgtgtgaga 31416815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 33845391 - 33845478
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaa 113  Q
    |||||||||||||||  || |||||||||||| |||||||||         |||||||||||||| |||||||||||||||||||| || |||||||    
T  33845391 aatgaaataatcattacatgtaacacttttactaaactgccc---------aagaaaaagacaaacttaaagttgcattgaaaattgtgcgagaaaa 33845478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 110
Target Start/End: Complemental strand, 36836199 - 36836148
Alignment:
Q  59 ttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    ||||||||||  || |||||||| ||||||||||||||||||||||||||||    
T  36836199 ttactttatagaaacaagacaaatttaaagttgcattgaaaattatgtgaga 36836148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 181
Target Start/End: Complemental strand, 40805073 - 40805030
Alignment:
Q  138 aaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
    |||||||||||||||||||| ||||||||||||||||| |||||    
T  40805073 aaaaaattaaagttgtattgtaaatgtaaagtgacatttatttt 40805030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 29001634 - 29001696
Alignment:
Q  126 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||| | |||||||| ||| |||||||||||||||  |||||| ||||||||||||    
T  29001634 aaagttggaagaataaaattaaggttatattggaaatgtaaaacgacattaattttgaaacaa 29001696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 113
Target Start/End: Complemental strand, 18733583 - 18733540
Alignment:
Q  70 gaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaa 113  Q
    |||||||||||| ||||||||||||||||| || ||||||||||    
T  18733583 gaaaaagacaaatttaaagttgcattgaaagttgtgtgagaaaa 18733540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 42753744 - 42753705
Alignment:
Q  150 ttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  42753744 ttgtattggaaattgaaagtgacattcattttgaaacaaa 42753705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 110
Target Start/End: Complemental strand, 5723128 - 5723090
Alignment:
Q  72 aaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  5723128 aaaagacaaacttaaagttgcattgaaaattgtgtgaga 5723090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 29001577 - 29001631
Alignment:
Q  58 cttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaa 112  Q
    |||| |||||| ||| || ||||| |||||||||||||||||||| |||||||||    
T  29001577 cttattttataggaacaaaacaaacttaaagttgcattgaaaattgtgtgagaaa 29001631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 47271789 - 47271731
Alignment:
Q  124 gtaaagttggaaggaaaaaat-taaagttgtattggaaatgtaaagtgacattcatttt 181  Q
    ||||||||||||| ||||||  |||||||||||||||||| || |||| ||||||||||    
T  47271789 gtaaagttggaagaaaaaaaactaaagttgtattggaaatctagagtgtcattcatttt 47271731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 32873127 - 32873168
Alignment:
Q  6 ttaagaaattgaatgaaataatcattggatataacactttta 47  Q
    ||||||||||||||| |||||||||| ||||||||| |||||    
T  32873127 ttaagaaattgaatgcaataatcattagatataacattttta 32873168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 6e-61; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 48259819 - 48260008
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||| ||| ||||||||||||| || || ||||||||||||  ||||||||||| |||||||||||||||| ||| ||||||||||||||||||    
T  48259819 acagattaaggaatagaatgaaataatcgttagacataacacttttattaaactgcccttgctttataagaaaaagataaacttaaagttgcattgaaaa 48259918  T
Q  101 ttatgtga--gaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    || |||||  |||||| | | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48259919 ttgtgtgaaagaaaagtttgagagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 48260008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 11650254 - 11650056
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||||||||||||||||||| |||| ||||||  | |||||| ||||||||||||||||| |||||||||||||| |||||||||||||| |||    
T  11650254 acagattaagaaattgaatgaaataaccattagatatagtatttttactaaactgcccttactttaaaagaaaaagacaaacttaaagttgcattggaaa 11650155  T
Q  101 ttatgtgaga-aaagatggg----------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    || ||||||| ||| || ||          ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11650154 ttgtgtgagagaaaaattggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 11650056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 5 - 185
Target Start/End: Original strand, 40060866 - 40061048
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    ||||||||||  ||||||||||| ||| || ||||||||||||| ||| |||||||||||||||||||||||| ||  ||| |||||||||||||||| |    
T  40060866 attaagaaatgaaatgaaataatgattagacataacacttttactaaattgcccttactttataagaaaaagataattttatagttgcattgaaaatttt 40060965  T
Q  105 gt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    ||  |||||||| ||| |||||||||||| |||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  40060966 gtaagagaaaagttggagagggtaaagtttgaaaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa 40061048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 4 - 188
Target Start/End: Original strand, 24040983 - 24041155
Alignment:
Q  4 gattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatta 103  Q
    ||||||| ||| |||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  24040983 gattaaggaatggaatgaaataatcattagacataacacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattg 24041082  T
Q  104 tgtgagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||             | |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24041083 tgtgaga-------------gaaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 24041155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 84474 - 84648
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||| |||||||||||||||||||| || ||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||||||    
T  84474 acagattaaggaattgaatgaaataatcattagacataacacttttactaaaatgtccttactttataagaaaaagacaaacttaaagttgcattgaaaa 84573  T
Q  101 ttatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    || || ||||             | ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  84574 ttgtgcgaga-------------gaaaaattggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttaaaacaa 84648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 1430492 - 1430666
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgc-ccttactttataagaaaaagacaaaattaaagttgcattgaaa 99  Q
    ||||||||||||||| ||||||||||| ||| |||||||||||||||| ||||||| | ||||||||||||||||||||||| |||||||||||||| ||    
T  1430492 acagattaagaaatttaatgaaataataattagatataacacttttactaaactgcactttactttataagaaaaagacaaacttaaagttgcattggaa 1430591  T
Q  100 attatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 187  Q
    ||| |||| ||             | ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1430592 attgtgtgtga-------------gaaaagttggaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaaca 1430666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 43929876 - 43929683
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    ||||||||||||||||||||||||||| || ||||||||||||| | ||| || |||||||||||||||||||| || ||||||||| || |||||||||    
T  43929876 attaagaaattgaatgaaataatcattagacataacacttttactatacttccattactttataagaaaaagactaacttaaagttgtatcgaaaattat 43929777  T
Q  105 gtgagaaaagatggg----------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||| || |  ||          ||||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||||||||||    
T  43929776 gtgagagaaaagtggagtatttattgagggtaaagttggaaggaaaaaattaaagttgtattggaaactgaaattgacattcattttgaaacaa 43929683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 52403672 - 52403563
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||  ||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  52403672 acagattaagaaatggaatgaaataatcattggatataacactgttattaaactgcccttactttataaggaaaagacaaaattaaagttgcactgaaaa 52403573  T
Q  101 ttatgtgaga 110  Q
    ||||||||||    
T  52403572 ttatgtgaga 52403563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 3 - 189
Target Start/End: Original strand, 5317535 - 5317732
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgccc-ttactttataagaaaaagacaaaattaaagttgcattgaaaat 101  Q
    |||||||| |||  ||||||||||||||| || ||||||||||||| ||| ||||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  5317535 agattaaggaatgaaatgaaataatcattagacataacacttttactaaattgccccttattttataagaaaaagacaaacttaaagttgcattgaaaat 5317634  T
Q  102 tatgt-gagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    | ||  |||||||| ||  |         |||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  5317635 tgtggagagaaaagttgtagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaattgtaaagtgacattcattttgaaacaaa 5317732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 1429059 - 1428865
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgccc-ttactttataagaaaaagacaaaattaaagttgcattgaaaatta 103  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| |||||||||||||||| |||||| ||||||||| |||| |||||     
T  1429059 attaagaaattgaatgaaataattattagatataacacttttactaaactgccctttactttataagaaaaggacaaacttaaagttgaattggaaattg 1428960  T
Q  104 tgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 187  Q
    |||  |||||||| | |          ||||||||||||| ||| |||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  1428959 tgtgagagaaaagtttgagtatttattgagggtaaagttgcaagaaaaaaatttaagttgtattagaaatgtaaagtgacattcattttaaaaca 1428865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 17919793 - 17919971
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga- 115  Q
    |||||||||||||||  | ||||||||||||| |||||||||||  ||||||  ||||||||||| |||||||||||||||||||| |||||||||| |     
T  17919793 aatgaaataatcatta-acataacacttttactaaactgcccttgttttatattaaaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaag 17919891  T
Q  116 ----------tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
              |   ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  17919892 ttagagtatatattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgatattcattttgaaa 17919971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 28751364 - 28751560
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||| |||  ||| ||||||||||| || |||||| |||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||||    
T  28751364 acagattaaggaatgaaataaaataatcattagacataacatttttactaaactgcccttactttataagaaaaggacaaacttaaagttacattgaaaa 28751463  T
Q  101 ttat--gtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgaca-ttcattttgaaa 185  Q
    || |  | |||||||| | |          ||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  28751464 ttgtgcgagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacatttcattttgaaa 28751560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 188
Target Start/End: Complemental strand, 12002426 - 12002244
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagat 116  Q
    ||||||||||||||  || |||| |||||||| |||||||||||  |||||| |||||||||||| |||||||||||||||||||| |||||||||| |     
T  12002426 aatgaaataatcatcagacataatacttttactaaactgcccttgttttatatgaaaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaag 12002327  T
Q  117 ggggag-----------ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
      ||||           ||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  12002326 ttggagtatttattgaaggtaaagctggaagaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttaaaacaa 12002244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 37437375 - 37437549
Alignment:
Q  17 aatgaaataatcattggatataacactttt-accaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga 115  Q
    ||||||||| ||||| || ||||||||||| || ||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| || |    
T  37437375 aatgaaatattcattagacataacactttttactaaattgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaa 37437474  T
Q  116 ---tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 187  Q
       | | |||| |||||||| ||| ||| ||||||| |||||||| |||||||||| || | |||||||||||||    
T  37437475 aattagagaggataaagttgaaagaaaataattaaaattgtattgaaaatgtaaagcgatactcattttgaaaca 37437549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 58 - 185
Target Start/End: Original strand, 44582791 - 44582931
Alignment:
Q  58 cttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaat 144  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    |||| ||| |         |||||||||||||||| |||||||    
T  44582791 cttactttataagaaaaagacaaacttaaagttgcattgaaaattatgtgagatagaaaagttggagtatttattgagggtaaagttggaagaaaaaaat 44582890  T
Q  145 taaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  44582891 taaagttgtattggaaatgtaaagtgacatttattttgaaa 44582931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 50349817 - 50350012
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttact------ttataagaaaaagacaaaattaaagttgcattgaa 98  Q
    |||||| ||| |||||||||||||||| || ||||||||||||| ||||||||||||||      |||||||||||||||||| ||||||||||||||||    
T  50349817 attaaggaatggaatgaaataatcattagacataacacttttactaaactgcccttactttataattataagaaaaagacaaacttaaagttgcattgaa 50349916  T
Q  99 aattatgt--gagaaaagatggggagggta--aagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgac--attcattttgaaacaa 188  Q
    |||| |||  |||||||| | | |    ||   || |||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  50349917 aattgtgtgagagaaaagtttgagtatttattgaggtggaagaaaaaaattaaagttgtattggaaatgtaaagtgacatattcattttgaaacaa 50350012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 30006326 - 30006182
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||  |||||||||||||||||||| || |||||||| |||| ||| ||| |||||||||||||||||||| ||| ||||||||||||||||||    
T  30006326 acagattaatgaattgaatgaaataatcattagacataacactattactaaattgctcttactttataagaaaaagataaatttaaagttgcattgaaaa 30006227  T
Q  101 t--tatgtgagaaaagatggggagggtaaagttggaaggaaaaaa 143  Q
    |  | || |||||||| ||| ||||||||||||| ||| ||||||    
T  30006226 ttgtttgagagaaaagttggagagggtaaagttgaaagaaaaaaa 30006182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 177
Target Start/End: Original strand, 10690915 - 10691074
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    ||||||||||  ||||||||||||||| ||||||||| |||||| ||||||| |||||||  ||||||||||||||| |||||||||||||||||||| |    
T  10690915 attaagaaatgaaatgaaataatcattagatataacatttttactaaactgcacttacttcgtaagaaaaagacaaacttaaagttgcattgaaaattgt 10691014  T
Q  105 gtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattca 177  Q
    |||||| |             ||||||| ||| ||||||||| |||||||||| |||||||||||||||||||    
T  10691015 gtgagata-------------aaagttgaaagaaaaaaattatagttgtattgaaaatgtaaagtgacattca 10691074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 2459202 - 2459005
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    ||||||||||||||| |||||| || |||   |  |||||| |||||| ||| |  ||||||||||||||||||| ||||| ||||||||| ||||||||    
T  2459202 acagattaagaaattaaatgaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaa 2459103  T
Q  101 ttatgtgagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    || || |||||||| | | |         |||||||||||||||| ||||||||||||||| |||| |||||||||| ||||||||||||||||||||    
T  2459102 ttgtgagagaaaagtttgagtatttgttgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaacaaa 2459005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 188
Target Start/End: Original strand, 38132202 - 38132322
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtatt 156  Q
    |||||||||||| ||| |||||| | |||||||||||||||||||| |||||||||           | ||||||||||| |||||||||||||||||||    
T  38132202 ccttactttataggaacaagacatacttaaagttgcattgaaaattgtgtgagaaa-----------gaaaagttggaagaaaaaaattaaagttgtatt 38132290  T
Q  157 ggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||||||||||||||||||||||    
T  38132291 ggaaatgtaaagtgacattcattttgaaacaa 38132322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 6332359 - 6332251
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    ||||||||||||||||||||||||||| || ||||||||||||| |||||||| ||  |||||| ||||||||||||  ||||||| ||||||||||| |    
T  6332359 attaagaaattgaatgaaataatcattagacataacacttttactaaactgcctttgttttatatgaaaaagacaaacataaagttacattgaaaattgt 6332260  T
Q  105 gtgagaaaa 113  Q
    |||||||||    
T  6332259 gtgagaaaa 6332251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 43105562 - 43105659
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    ||||||||||||||||||||||||||| || ||||||||||||| ||| | || ||| ||||||||||||||||||| ||||| ||||||||||||||    
T  43105562 attaagaaattgaatgaaataatcattagacataacacttttactaaattaccattattttataagaaaaagacaaacttaaaattgcattgaaaatt 43105659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 26252260 - 26252116
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgag----aaaagatgggg---------agggtaaagttggaaggaaaaaa 143  Q
    ||||| |||||||||| |||||||| |||||||||||||||||||| ||||||    ||||| | | |         |||||||||||||||| ||||||    
T  26252260 ccttattttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagaaaaaagttagagtatttattaagggtaaagttggaagaaaaaaa 26252161  T
Q  144 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    || ||||||||||||||||||||||||||||||||||||||||||    
T  26252160 tttaagttgtattggaaatgtaaagtgacattcattttgaaacaa 26252116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 188
Target Start/End: Complemental strand, 22665091 - 22664937
Alignment:
Q  43 ttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatgggg---------agggtaaagttgg 133  Q
    |||||| |||||  |||||||||||||||| |||||||| ||||||||| ||| |||||| || |||| ||| ||| |         |||||||||||||    
T  22665091 ttttactaaactaaccttactttataagaacaagacaaacttaaagttgaattaaaaattgtgagagagaagttggagtatttattgagggtaaagttgg 22664992  T
Q  134 aaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||| ||  |||||| ||||||||||||||||||||||||||||||||||||||||    
T  22664991 aagaaattaattaacgttgtattggaaatgtaaagtgacattcattttgaaacaa 22664937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 188
Target Start/End: Original strand, 254926 - 255068
Alignment:
Q  60 tactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgag----aaaagatgggg---------agggtaaagttggaaggaaaa-aatt 145  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||    ||||| ||| |         |||||||||||||||| |||| ||||    
T  254926 tactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagtgagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaatt 255025  T
Q  146 aaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||| ||||||||||||||| |||||||||||||||||||    
T  255026 aaagttgcattggaaatgtaaagcgacattcattttgaaacaa 255068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 12851807 - 12851739
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12851807 gagggtaaagttgggagaaaaaaattaaagttctattggaaatgtaaagtgacattcattttgaaacaa 12851739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 189
Target Start/End: Complemental strand, 44583963 - 44583769
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    ||||||||||  ||| ||||||||||| || |||||| |||| | |||||||| ||| ||||||||||||||||||| |||| ||||||||||||| |||    
T  44583963 attaagaaatgaaataaaataatcattagacataacaattttcctaaactgcc-ttattttataagaaaaagacaaacttaatgttgcattgaaaactat 44583865  T
Q  105 gtg--agaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    |||  ||||||| | | |         ||||||||||  |||| |||||||||||||||||||  |||||||| |||||||||||||| |||||||    
T  44583864 gtgaaagaaaagttagagtacttattaagggtaaagtcagaagaaaaaaattaaagttgtattaaaaatgtaaggtgacattcattttaaaacaaa 44583769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 45377236 - 45377301
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    |||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||    
T  45377236 gagggtaaagttgggagaaaaaaagtaaagttgtattggaaatgtaaagtgacattcattttgaaa 45377301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 188
Target Start/End: Original strand, 15698726 - 15698905
Alignment:
Q  21 aaataatcattggatataacacttttaccaaactgccct-tactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga---t 116  Q
    ||||||||||| || |||||||||| |  ||||| || | |||||||||||||||||| ||| ||||||||  |||||||||||||||||| || |   |    
T  15698726 aaataatcattagacataacactttaaataaactaccatgtactttataagaaaaagataaacttaaagttctattgaaaattatgtgagagaaaagttt 15698825  T
Q  117 ggg--------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    | |        ||| ||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  15698826 gagtatttattgagagtaaagttggaagaagaaaattaaagttgtattggaaatataaagtgacattcattttaaaacaa 15698905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 45749470 - 45749554
Alignment:
Q  16 gaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||| ||||||||||| || ||||||||||||| |||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  45749470 gaataaaataatcattagacataacacttttactaaaccgcccttactttataagaaaaagacaaacttaaatttacattgaaaa 45749554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 48319981 - 48320144
Alignment:
Q  25 aatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaat-tatgtgagaaaagatggggagg 123  Q
    ||||||| || |||| |||||||| ||| |||||||||||||||| | ||||||||| |||||||||||| |||| | | || |||| ||  ||| |||     
T  48319981 aatcattagacataagacttttactaaattgcccttactttataaaagaaagacaaacttaaagttgcatcgaaattgtgtgagagataaattggagaga 48320080  T
Q  124 gtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||| ||| |||||||||||| |||||||| |||| |||||| ||||| ||||| ||||||    
T  48320081 gtaaagtt-gaaagaaaaaattaaatttgtattgaaaatataaagtaacatttattttaaaacaa 48320144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 185
Target Start/End: Complemental strand, 43755187 - 43755054
Alignment:
Q  38 aacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggggagggtaaagttggaagg 137  Q
    ||||||||||| |||  |||||||||| |||||||||||||||| |||||||||  ||||||||| ||||||| ||             ||||||||||     
T  43755187 aacacttttactaaatcgcccttacttaataagaaaaagacaaacttaaagttgttttgaaaattgtgtgagagaa-------------aagttggaag- 43755102  T
Q  138 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||    
T  43755101 aaaaaattaaagttgtattgaaaatgtaaagtgacgttcattttgaaa 43755054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 181
Target Start/End: Complemental strand, 2245982 - 2245791
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||||||| ||||||| ||||||||  | |||| | |||||| |||||| | || |||||||||||||||||||| |||||| |||||||||||||    
T  2245982 agattaagaaatggaatgaagtaatcattaaacataatatttttactaaactgtcattcctttataagaaaaagacaaacttaaagatgcattgaaaatt 2245883  T
Q  103 ----atgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
        | | |||||||| | |          ||||||||||||| ||| |||| ||||||||||||||| |||||||| ||||||||||||||    
T  2245882 gtgaaagagagaaaagtttgagtatttattgagggtaaagttgaaagaaaaagattaaagttgtattgaaaatgtaaggtgacattcatttt 2245791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 188
Target Start/End: Original strand, 17806392 - 17806529
Alignment:
Q  62 ctttataagaaaaagacaaaattaaagttgcattgaaaatt--atgtgagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagt 150  Q
    |||||||||||||||||||| ||||| ||||||||||||||  ||| |||||||| ||| |         | |||||| ||||||| |||||||||||||    
T  17806392 ctttataagaaaaagacaaacttaaaattgcattgaaaattgtatgagagaaaagttggagtatttattgaaggtaaaattggaagtaaaaaattaaagt 17806491  T
Q  151 tgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||||||| |||| ||||||| ||||||    
T  17806492 tgtattggaaatgtaaagcgacactcattttaaaacaa 17806529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 185
Target Start/End: Complemental strand, 49894943 - 49894807
Alignment:
Q  36 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggggagggtaaagttggaa 135  Q
    |||||| |||||| ||| |  |||||||||||||||| |||||||| |||||||| ||||||||||| ||||||| ||             ||||| |||    
T  49894943 ataacaattttactaaaataaccttactttataagaataagacaaacttaaagttacattgaaaattgtgtgagagaa-------------aagttagaa 49894857  T
Q  136 ggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    | |||||||||||||||||||||||||||||| | |||||||||||||||    
T  49894856 gaaaaaaattaaagttgtattggaaatgtaaaataacattcattttgaaa 49894807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 185
Target Start/End: Original strand, 50158276 - 50158458
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    ||||||||||||  |||| ||||||||||||||||||||||||||| ||||| ||||| ||||||||           ||||||||||||||| ||||||    
T  50158276 agattaagaaatataatgcaataatcattggatataacacttttactaaacttcccttgctttataa-----------aattaaagttgcatt-aaaatt 50158363  T
Q  103 atgtgaga--aaagatgggga---------gggtaaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
     |||||||  |||| ||| ||         || |||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||    
T  50158364 gtgtgagagaaaagttggagaattttttgaggttaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa 50158458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 44024611 - 44024543
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||||| | |||||||||||||||||    
T  44024611 gagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcggcattcattttgaaacaa 44024543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 181
Target Start/End: Complemental strand, 40719195 - 40719020
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagat 116  Q
    ||||||||||||||| || || ||| |||||| |||||||| ||  |||||| |||||||| ||| ||||||||| ||||| |||| ||| |||||| |     
T  40719195 aatgaaataatcattagacatcacatttttactaaactgccattgttttatatgaaaaagataaatttaaagttgtattgagaattgtgtaagaaaaaag 40719096  T
Q  117 ggggag-----------ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
      ||||           |||||||||||||| |||||||||||||||||||  ||||||||| |||||||||||||    
T  40719095 ttggagtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattaaaaatgtaaattgacattcatttt 40719020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 189
Target Start/End: Original strand, 5854238 - 5854381
Alignment:
Q  59 ttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 145  Q
    ||||||||||||||||||||||  |||| ||||||||||||||| |||||||    |||| ||| |         ||| |||||||||||  ||||||||    
T  5854238 ttactttataagaaaaagacaaccttaaggttgcattgaaaattgtgtgagatcgaaaagttggagtatttattgaggataaagttggaataaaaaaatt 5854337  T
Q  146 aaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    ||||||| ||||||||||||||| |||||| ||| |||||||||    
T  5854338 aaagttgcattggaaatgtaaagcgacatttattctgaaacaaa 5854381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 26582985 - 26582923
Alignment:
Q  126 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||| |||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  26582985 aaagttcgaagaaaaaaattaaagttgtattggaaatgtaaagtaacatttattttaaaacaa 26582923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 28200310 - 28200379
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgta-ttggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||||||| ||||||||||||||| | ||| ||||||| || |||||||||||||||||||    
T  28200310 gagggtaaagttggaagaaaaaaattaaagttgcatttgaaaatgtagagcgacattcattttgaaacaa 28200379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 9552368 - 9552420
Alignment:
Q  58 cttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  9552368 cttactttataagaacaagacaatcttaaagttgcattgaaaattatgtgaga 9552420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 9552436 - 9552484
Alignment:
Q  140 aaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  9552436 aaaattaaagttgtattggaaatgtaaaatgacattcattttaaaacaa 9552484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 15647150 - 15647215
Alignment:
Q  121 agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||| || ||||||  ||| |||||||| ||||||||||||||||||||||||||||||    
T  15647150 agggtaaagttgggagaaaaaaa--aaatttgtattgaaaatgtaaagtgacattcattttgaaacaa 15647215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 43738344 - 43738408
Alignment:
Q  124 gtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||| ||| |||||||| ||||||||||| |||||| |||||||||||||||| ||||||    
T  43738344 gtaaagttgaaagaaaaaaatttaagttgtattgaaaatgtgaagtgacattcattttaaaacaa 43738408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 187
Target Start/End: Original strand, 11134548 - 11134614
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 187  Q
    ||||| ||||||||||  || |||||||||||| |||| |||||||||||||||||||||||||||||    
T  11134548 gagggcaaagttggaaa-aagaaattaaagttgcattgaaaatgtaaagtgacattcattttgaaaca 11134614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 42650339 - 42650402
Alignment:
Q  123 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 186  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||||| |||||| ||||| ||||    
T  42650339 ggtaaagctggaagaaaaaaattaaagttgtattagaaatgtaaagcgacatttattttaaaac 42650402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 42650261 - 42650314
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    ||||| ||||||||||||||||||| ||||| |||||||||||||| |||||||    
T  42650261 ccttagtttataagaaaaagacaaacttaaaattgcattgaaaattgtgtgaga 42650314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 52403542 - 52403482
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattt 180  Q
    ||||||||||||||||   |||| |||||||||||||| |||| |||||||||||||||||    
T  52403542 gagggtaaagttggaatagaaaacttaaagttgtattgaaaatttaaagtgacattcattt 52403482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 672300 - 672346
Alignment:
Q  64 ttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||    
T  672300 ttataagaaaaagacaaacttaaatttgcattgaaaattgtgtgaga 672346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 102
Target Start/End: Original strand, 35149394 - 35149436
Alignment:
Q  60 tactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  35149394 tactttataagaaaaagataaaattaaagttgcattgataatt 35149436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 35149485 - 35149535
Alignment:
Q  138 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||||||||||||||| |||||||| ||| |||| |||||||    
T  35149485 aaaaaattaaagttgtattggaaatataaagtgaaatttatttcgaaacaa 35149535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 50591388 - 50591446
Alignment:
Q  126 aaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacattcattttga 183  Q
    ||||||||||| |||| ||||||||||||||||| ||||||||  ||||||||||||||    
T  50591388 aaagttggaagaaaaaaaattaaagttgtattggtaatgtaaaacgacattcattttga 50591446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 6332229 - 6332164
Alignment:
Q  124 gtaaagttggaaggaaaaaa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||| ||| |||||| |||||||||| ||  ||||||||||||||||||||||| ||||||    
T  6332229 gtaaagttgaaagaaaaaaaattaaagttgtgttaaaaatgtaaagtgacattcattttaaaacaa 6332164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 28200234 - 28200279
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||||||    
T  28200234 ccttactttataagaaaaatacaaacttaaagttgtattgaaaatt 28200279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 43738214 - 43738311
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    ||||||||||  ||| ||||||| ||| || |||| | |||||| ||||| || ||||||||||||||||||| |||  ||||||| | |||||||||    
T  43738214 attaagaaatgaaataaaataattattagacataatatttttactaaactacctttactttataagaaaaagataaatataaagttactttgaaaatt 43738311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 9333168 - 9333105
Alignment:
Q  126 aaagttggaaggaaaaaa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||| |||||| ||||| ||||||| |||||||||||| ||||| ||||| ||||||    
T  9333168 aaagttggaagaaaaaaaattaaaattgtattagaaatgtaaagtaacatttattttaaaacaa 9333105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 9356941 - 9356878
Alignment:
Q  126 aaagttggaaggaaaaaa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||| |||||| ||||| ||||||| |||||||||||| ||||| ||||| ||||||    
T  9356941 aaagttggaagaaaaaaaattaaaattgtattagaaatgtaaagtaacatttattttaaaacaa 9356878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 12851870 - 12851836
Alignment:
Q  68 aagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||||||||||||||||||||||| ||||||    
T  12851870 aagaaaaagacaaaattaaagttgcattaaaaatt 12851836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 43105692 - 43105728
Alignment:
Q  145 taaagttgtattggaaatgtaaagtgacattcatttt 181  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  43105692 taaagttgtattgaaaatgtaaggtgacattcatttt 43105728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 50591309 - 50591381
Alignment:
Q  36 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtga 108  Q
    |||||| |||||| ||| |  ||||| |||||| ||| |||||||| ||||| |||||||||||||| |||||    
T  50591309 ataacaattttactaaaataaccttattttataggaacaagacaaacttaaaattgcattgaaaattgtgtga 50591381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 3 - 181
Target Start/End: Original strand, 12040 - 12219
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||| ||| |||||||||||||||| || ||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  12040 agattaaggaatggaatgaaataatcattagacataacacttttactaaactgcc-ttactttataagaaaaagacaaacttaaagttgcattgaaaatt 12138  T
Q  103 atgtgaga--aaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
     |||||||  |||| | | ||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||    
T  12139 gtgtgagagaaaagtttgagagggtaaagttggaagaaaaaaattaaagttatattggaaatgtaaaatgacattcatttt 12219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 1e-49; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 7612693 - 7612496
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||||||| ||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7612693 acagattaagaaatagaatgaaataatcattggatataacgcttt-actaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 7612595  T
Q  101 ttatgt--gagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    || |||  |||||||| ||| |         ||||||||||||||||  |||| |||| ||||||||| ||||||||||||||||||||||| ||||||    
T  7612594 ttgtgtgagagaaaagttggagtatttatttagggtaaagttggaagagaaaacttaatgttgtattgaaaatgtaaagtgacattcattttaaaacaa 7612496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 45187252 - 45187440
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||| |||  ||||||||||||||| || || |||||||||| |||||| ||||  ||||||||||||||||||| |||||||||| |||||||    
T  45187252 acagattaaggaatataatgaaataatcattagacatgacacttttactaaactgtccttgttttataagaaaaagacaaacttaaagttgctttgaaaa 45187351  T
Q  101 ttatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    || || |||||||| | | |||| ||| |||  ||| |||||||||||||||||||| |||| |||||||||||| |||||||||||||    
T  45187352 ttgtgagagaaaagttagagaggataatgttaaaagaaaaaaattaaagttgtattgaaaatataaagtgacatttattttgaaacaaa 45187440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 28 - 188
Target Start/End: Original strand, 29931224 - 29931386
Alignment:
Q  28 cattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt--gagaaaagatggggagggt 125  Q
    ||||| ||||||||||||||  |||||||| ||| ||||||||| ||||| ||||||||||||||||||||||||||||  |||||||| | | ||| ||    
T  29931224 cattgaatataacacttttattaaactgcctttattttataagagaaagaaaaaattaaagttgcattgaaaattatgtgagagaaaagtttgagagagt 29931323  T
Q  126 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||| |||| |||||||||||||||||||||||||||||||||| ||| ||||| ||||||    
T  29931324 aaagttagaagaaaaaaattaaagttgtattggaaatgtaaagtgatatttattttaaaacaa 29931386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 59 - 188
Target Start/End: Original strand, 1774085 - 1774214
Alignment:
Q  59 ttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattgg 158  Q
    |||||||||||||||||||||||||||||||||||||||||||| |  |||||||| | | ||| ||||||||||||| ||||||||||||||||||||     
T  1774085 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtaagagaaaagttagagagcgtaaagttggaagaaaaaaattaaagttgtattga 1774184  T
Q  159 aaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||| ||||||||||||| ||||||    
T  1774185 aaatgtaaattgacattcattttaaaacaa 1774214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 189
Target Start/End: Original strand, 27109780 - 27109976
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgccctt-actttataagaaaaagacaaaattaaagttgcattgaaaatta 103  Q
    |||||||||| |||||||||||||||| |||||||||||||||| ||| || | || |||||||||||||| |||||| |||||||||||||| |||||     
T  27109780 attaagaaatagaatgaaataatcattagatataacacttttactaaattgtcttttactttataagaaaaggacaaacttaaagttgcattggaaattg 27109879  T
Q  104 tgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    |||||||  |||| | | |         |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27109880 tgtgagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatggaaagtgacattcattttgaaacaaa 27109976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 22601315 - 22601133
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga-aaaga 115  Q
    ||||||||||||||| || ||||| ||||||| ||| || | ||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||     
T  22601315 aatgaaataatcattagacataactcttttactaaattgtctttactttataagaaaaagacaaacttaaagttgcattgaaaattctgtgagagaaagg 22601216  T
Q  116 tggg----------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    | ||          ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22601215 ttggagtatttatcgagggtaaagttggaag-aaacaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 22601133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 9022592 - 9022393
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaatt-aaagttgcattgaaa 99  Q
    ||||||||| |||| ||||||| |||||||| || ||||||||||||| ||||||| |||  |||||| |||||||||||| || |||||||||||||||    
T  9022592 acagattaaaaaatggaatgaattaatcattagacataacacttttactaaactgcacttgttttatatgaaaaagacaaacttaaaagttgcattgaaa 9022493  T
Q  100 attatgtgag--aaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||| ||||||  ||||| |||          ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  9022492 attgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaacgtaaagtgacattcattttaaaacaa 9022393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 36 - 185
Target Start/End: Complemental strand, 16209102 - 16208951
Alignment:
Q  36 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga--aaagatggggagggtaaagttgg 133  Q
    ||||||||||||  || ||| ||||| |||||| |||||||||||| ||||||||||||||||||||||||||||  |||| ||  ||||||||| ||      
T  16209102 ataacacttttattaatctgtccttattttataggaaaaagacaaacttaaagttgcattgaaaattatgtgagagaaaagttgtagagggtaaaattta 16209003  T
Q  134 aaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  16209002 aagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa 16208951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 38329011 - 38329185
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||| ||| |||||||||||||||| || ||||||||||||| |||||| |||||||||||||  |||||||||| ||||||||||||||||||    
T  38329011 acagattaaggaatggaatgaaataatcattagacataacacttttactaaactg-ccttactttataatcaaaagacaaacttaaagttgcattgaaaa 38329109  T
Q  101 ttatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    || |||             ||||||||||||| ||| |||||||||||||||||||| |||| |||||||||||||||||| |||||||    
T  38329110 ttgtgt-------------gagggtaaagttgaaagaaaaaaattaaagttgtattgaaaatataaagtgacattcattttaaaacaaa 38329185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 36915561 - 36915365
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||| ||| |||||||||||||||| || |||| | |||||| ||| |||||||  |||||| |||||||||||| ||||||||||||||||||    
T  36915561 acagattaaggaatggaatgaaataatcattagacataatatttttactaaattgcccttgttttatatgaaaaagacaaacttaaagttgcattgaaaa 36915462  T
Q  101 ttatgtgagaaaagatggggag-----------ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||  ||||||||| |||  ||            |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36915461 tt--gtgagaaaaaatgttgaatatttattgaaggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 36915365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 30789115 - 30788934
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt--gagaaaag 114  Q
    ||||||||||||||| || ||||||||||||  ||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||||  ||||||||    
T  30789115 aatgaaataatcattagacataacacttttattaaattgtccttactttataagaaaaagacaaatttaaagttgtattgaaaattatgtgagagaaaag 30789016  T
Q  115 atgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 187  Q
     ||| |         ||||||||||| |||| |||||||||||||||||||| | ||||||||||||||| ||||| |||||    
T  30789015 ttggagtatttactaagggtaaagttagaagaaaaaaattaaagttgtattgaatatgtaaagtgacatttattttaaaaca 30788934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 57 - 183
Target Start/End: Original strand, 34168224 - 34168355
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga-----tggggagggtaaagttggaaggaaaaaattaaagtt 151  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| ||||||| ||||     |   ||||||||||||||||| ||||| ||||||||    
T  34168224 ccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagaagagtatttcttgagggtaaagttggaagaaaaaagttaaagtt 34168323  T
Q  152 gtattggaaatgtaaagtgacattcattttga 183  Q
    |||||| |||||||||||||||||||||||||    
T  34168324 gtattgaaaatgtaaagtgacattcattttga 34168355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 2067894 - 2067788
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||||||| |||||||||||||||| |||||||| ||||||  ||||||||||||||||||||| ||||||| |||||||||||||||| ||||||    
T  2067894 agattaagaaatggaatgaaataatcatttgatataacgcttttattaaactgcccttactttataaggaaaagaccaaattaaagttgcattaaaaatt 2067795  T
Q  103 atgtgag 109  Q
     ||||||    
T  2067794 gtgtgag 2067788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 6839403 - 6839215
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    ||||||||| |||| |||||||||||||||| || ||||||||||||| ||| |||| |||||||||||||||||||||||  |||| ||||||||||||    
T  6839403 acagattaaaaaatggaatgaaataatcattagacataacacttttactaaattgcctttactttataagaaaaagacaaacataaaattgcattgaaaa 6839304  T
Q  101 ttatgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||  |||||||| |||  | | |||||||  ||  |||||||||||||| | ||  ||||||||||| | ||||||||| ||||||    
T  6839303 ttatgtgagagaaaagttggaaatgataaagtt-aaaaaaaaaaattaaagttattttaaaaatgtaaagtaaaattcattttaaaacaa 6839215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 32326681 - 32326875
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||| |||  ||||||||||||||| ||  |||||||||||| |||||||||||  |||||| |||||||||||| ||||||||||||||||||    
T  32326681 acagattaaggaatgaaatgaaataatcattagacgtaacacttttactaaactgcccttgttttatatgaaaaagacaaatttaaagttgcattgaaaa 32326780  T
Q  101 ttatgtgagaaaagatgggga-----------gggtaaagttggaagg-aaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 183  Q
    || |||||||||| |   |||           ||||||| ||| |||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  32326781 ttgtgtgagaaaaaagttggagtatttattgtgggtaaaattgaaaggaaaaaaattaaagttgtattgaaaatgtaaagtgacatttattttga 32326875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 185
Target Start/End: Complemental strand, 7129476 - 7129302
Alignment:
Q  3 agattaagaaattgaatgaaata-----atcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattga 97  Q
    |||||||||||| ||||||||||     ||||||| ||||||| ||||||| ||||||   |||||||||||||| |||||||||||||||||||||||     
T  7129476 agattaagaaatggaatgaaatagtataatcattgaatataacgcttttactaaactgattttactttataagaataagacaaaattaaagttgcattgg 7129377  T
Q  98 aaattatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    ||||| |||||||             | ||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||    
T  7129376 aaattgtgtgaga-------------gaaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagtgacattcattttgaaa 7129302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 185
Target Start/End: Original strand, 18666534 - 18666672
Alignment:
Q  34 atataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggggagggtaaagttgg 133  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||| | |||||||||||| |||||| |||||||             | ||||||||    
T  18666534 atataacacttttactaaactgtccttactttataagaaaaagacaacactaaagttgcattaaaaattgtgtgaga-------------gaaaagttgg 18666620  T
Q  134 aaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    ||| |||||| |||||||| ||||||||||||||||||||||||||||||||    
T  18666621 aagaaaaaaactaaagttgcattggaaatgtaaagtgacattcattttgaaa 18666672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 8471399 - 8471279
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtatt 156  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |           | ||||||||||| ||||||||||||||| |||    
T  8471399 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagaga-----------gaaaagttggaagaaaaaaattaaagttgcatt 8471311  T
Q  157 ggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||| |||||||||||||||||||    
T  8471310 ggaaatgtaaagcgacattcattttgaaacaa 8471279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 36 - 188
Target Start/End: Original strand, 14541737 - 14541900
Alignment:
Q  36 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga--aaagatgggg---------aggg 124  Q
    |||||| |||||| ||| |  |||||||||||||||| |||||||| |||||||||||||||||||| || ||||  |||| ||  |         |||     
T  14541737 ataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgagagagaaaagttgaagtatttattaagga 14541836  T
Q  125 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14541837 taaagttggaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 14541900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 11335995 - 11336098
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    ||||||||||||||  |||||| ||| |||| |||||||||||||||| |||      ||||||||||||||||||||||||||||||||||||||||||    
T  11335995 acagattaagaaatgtaatgaagtaaccattcgatataacacttttactaaa------ttactttataagaaaaagacaaaattaaagttgcattgaaaa 11336088  T
Q  101 ttatgtgaga 110  Q
    || |||||||    
T  11336089 ttgtgtgaga 11336098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 156358 - 156239
Alignment:
Q  68 aagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaa 167  Q
    ||||||| |||||| ||||||||| |||||||||| || |||| || | | |||  |||||||||| || |||||||||||||| |||||| ||||||||    
T  156358 aagaaaaggacaaacttaaagttgtattgaaaattgtgcgagagaaaa-gtggaaagtaaagttgggagaaaaaaattaaagttatattgggaatgtaaa 156260  T
Q  168 gtgacattcattttgaaacaa 188  Q
    |||||||||||||||||||||    
T  156259 gtgacattcattttgaaacaa 156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 32737961 - 32737859
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgccc-ttactttataagaaaaagacaaaattaaagttgcattgaaa 99  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||   ||||||||| ||||||||||||||||||| ||| ||||| |||||||||||    
T  32737961 acagattaagaaattgaatgaaat-atcattagatataacacttttgttaaactgccctttactttataagaaaaagaaaaacttaaa-ttgcattgaaa 32737864  T
Q  100 attat 104  Q
    |||||    
T  32737863 attat 32737859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 67 - 189
Target Start/End: Original strand, 2803268 - 2803393
Alignment:
Q  67 taagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggggagggtaaagttggaag---gaaaaaattaaagttgtattggaaatg 163  Q
    ||||||||||||||| ||||||||| |||||||||| ||  ||| || |   ||||||||||||||| ||   |||||||||||| |||||||| |||||    
T  2803268 taagaaaaagacaaacttaaagttgaattgaaaattgtgcaagagaaaagttggagggtaaagttgggagggagaaaaaattaaaattgtattgaaaatg 2803367  T
Q  164 taaagtgacattcattttgaaacaaa 189  Q
    |||||||||||| |||||||||||||    
T  2803368 taaagtgacatttattttgaaacaaa 2803393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 34461670 - 34461737
Alignment:
Q  120 gagggtaaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacattcattttgaaac 186  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34461670 gagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 34461737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 181
Target Start/End: Complemental strand, 41415012 - 41414847
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga- 115  Q
    ||||||||||||||| ||  |||||||||||| || ||||||||| ||||||| ||||  | ||  |||||||||||||||||||| |||||||||| |     
T  41415012 aatgaaataatcattagacgtaacacttttactaa-ctgcccttattttataaaaaaataataagcttaaagttgcattgaaaattgtgtgagaaaaaag 41414914  T
Q  116 -tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
     || ||| |||||| ||||||| |||||||||||||  ||||  |||| |||||||||||| |||||    
T  41414913 ttgaggaaggtaaaattggaagaaaaaaattaaagtgatattaaaaatataaagtgacatttatttt 41414847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 24732144 - 24732079
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttacttta 66  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  24732144 acagattaagaaattgaatgaaatagtcattggatataacacttttactaaactgcccctacttta 24732079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 41790113 - 41790268
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagat 116  Q
    ||||||||||||||| || |||| |||||||  ||| || | || |||||||||||||||||||| ||||||||| |||||||||| |||||||          
T  41790113 aatgaaataatcattagacataatacttttattaaattgtctttgctttataagaaaaagacaaatttaaagttggattgaaaattgtgtgaga------ 41790206  T
Q  117 ggggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaa 184  Q
           | ||||||| |||  ||||||||||||||||||| |||||||||||||||||||||||||||    
T  41790207 -------gaaaagttgaaagaaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaa 41790268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 26439102 - 26438980
Alignment:
Q  59 ttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt--gagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttgtat 155  Q
    ||||||||||| |||||  |||| |||||||||||||||||||| |||  |||||||| | | |||| ||||||||||||  |||||||||||||||||     
T  26439102 ttactttataacaaaaa--caaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagaggataaagttggaagaaaaaaaattaaagttgta- 26439006  T
Q  156 tggaaatgtaaagtgacattcatttt 181  Q
    ||||||||||||||| ||||||||||    
T  26439005 tggaaatgtaaagtggcattcatttt 26438980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 3095590 - 3095656
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 186  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  3095590 gagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaac 3095656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 5588563 - 5588628
Alignment:
Q  123 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||| ||||||    
T  5588563 ggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcagtttaaaacaa 5588628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 11257731 - 11257540
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    |||||||||| |||||||||||| |||  | | |||| |||||| ||||| || ||| ||||||||||| ||||||| |||||||||||||||||||| |    
T  11257731 attaagaaatggaatgaaataattattaaaaa-aacatttttactaaactacctttattttataagaaacagacaaacttaaagttgcattgaaaattgt 11257633  T
Q  105 gt--gagaaaagatg---------gggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||  |||||||| ||           |||  ||||||||||||  ||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  11257632 gtgagagaaaagttgaagtatttattgagattaaagttggaag--aaaaattaaagttgtattaaaaatgtaaagtgacattcattttaaaacaa 11257540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 27416565 - 27416502
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    ||||||||||||||| |  ||||| |||||||||||||||||||||||||||||||||||||||||    
T  27416565 gagggtaaagttggacg--aaaaactaaagttgtattggaaatgtaaagtgacattcattttgaaa 27416502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 33870817 - 33870755
Alignment:
Q  123 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    |||||||||||||| |||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  33870817 ggtaaagttggaagaaaaaaattaaagttgtattgaaaatataaagtgacatccattttgaaa 33870755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 8382564 - 8382625
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
    |||||||||||||  || |||||||||||||||||||| |||||||||||||||||||||||    
T  8382564 gagggtaaagttgagagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 8382625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 39970390 - 39970323
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||| || |||||| ||| ||||||||||||||||||||| ||||||||||||||||||    
T  39970390 gagggtaaagttgggag-aaaaaactaatgttgtattggaaatgtaaagtaacattcattttgaaacaa 39970323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 178
Target Start/End: Original strand, 8107191 - 8107304
Alignment:
Q  67 taagaaaaagacaaaattaaagttgcattgaaaattatgtgaga--aaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgt 164  Q
    ||||||||||||||| ||||||||  |||||||||| | |||||  |||| ||| |||  |||| ||  ||  |||||||||||||||||||| ||||||    
T  8107191 taagaaaaagacaaatttaaagttctattgaaaattgtctgagagaaaagttggagagaataaaatttaaaaaaaaaaattaaagttgtattgaaaatgt 8107290  T
Q  165 aaagtgacattcat 178  Q
    ||||||||||||||    
T  8107291 aaagtgacattcat 8107304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 35052531 - 35052469
Alignment:
Q  126 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||| ||| ||||||||||||||||||||||||||||||  |||||||||||| ||||||    
T  35052531 aaagttgaaagaaaaaaattaaagttgtattggaaatgtaaaacgacattcattttaaaacaa 35052469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 32661371 - 32661310
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
    |||||||||||||| || |||||||||||||||||||| ||||||| ||| |||||||||||    
T  32661371 gagggtaaagttgggagaaaaaaattaaagttgtattgaaaatgtagagtaacattcatttt 32661310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 42946188 - 42946120
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||| ||| ||| |||||||||||||||||||  ||||||||| ||||||||||||| ||||||    
T  42946188 gagggtaaaattgaaagaaaaaaattaaagttgtattaaaaatgtaaaatgacattcattttaaaacaa 42946120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 5588426 - 5588512
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagtt 90  Q
    ||||||||||||  |||||||||||||||  | |||||| |||||| |||||| ||| | ||||||||||||||||||| ||||||||    
T  5588426 agattaagaaatataatgaaataatcattaaacataacatttttactaaactg-cctcaatttataagaaaaagacaaacttaaagtt 5588512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 32061515 - 32061578
Alignment:
Q  125 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||| ||| ||||||| |||||| | ||||||||||||||||||||||| ||||||    
T  32061515 taaagttggaagaaaataattaaatttgtatagaaaatgtaaagtgacattcattttaaaacaa 32061578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 18673189 - 18673247
Alignment:
Q  123 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
    |||||||||||||| ||||||||||||| | |||| |||||||||| ||||||||||||    
T  18673189 ggtaaagttggaagaaaaaaattaaagtcgcattgaaaatgtaaagcgacattcatttt 18673247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 2812968 - 2812915
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgccc 58  Q
    |||||| |||||||||||||||||||| || ||||||||||||| |||||||||    
T  2812968 attaagtaattgaatgaaataatcattagacataacacttttactaaactgccc 2812915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 13109045 - 13108989
Alignment:
Q  128 agttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 185  Q
    ||||||||| ||||||||||||||| |||| ||||||||| |||||||||||||||||    
T  13109045 agttggaag-aaaaaattaaagttgcattgaaaatgtaaaatgacattcattttgaaa 13108989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 27416643 - 27416593
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtg 107  Q
    ||||||||||||||||||||||||| ||| | |||||||||||||| ||||    
T  27416643 ccttactttataagaaaaagacaaacttagaattgcattgaaaattgtgtg 27416593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 42709949 - 42710046
Alignment:
Q  4 gattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    |||||||||||| ||| |||| |||||| || || ||||||  || |||||  ||||||||||| | ||||||| |||||||||||||| |||||||||    
T  42709949 gattaagaaattaaataaaattatcattagacatgacacttg-actaaactatccttactttattaaaaaaagataaaattaaagttgcgttgaaaatt 42710046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 2812858 - 2812817
Alignment:
Q  138 aaaaaattaaagttgtattggaaatgtaaagtgacattcatt 179  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  2812858 aaaaaattaaagttgtattggaaatgtaaagcaacattcatt 2812817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 13109129 - 13109076
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    ||||| ||||||||||||||||||| ||||| ||||||| |||||| |||||||    
T  13109129 ccttattttataagaaaaagacaaatttaaatttgcattaaaaattgtgtgaga 13109076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 39970496 - 39970412
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    ||||||||||||||| || ||| ||||||||| |||||||||         |||||||||||||| |||||||||||||||||||| || ||||    
T  39970496 aatgaaataatcattagacataccacttttactaaactgccc---------aagaaaaagacaaacttaaagttgcattgaaaattgtgcgaga 39970412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 5044218 - 5044290
Alignment:
Q  36 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtga 108  Q
    |||| |||||||  ||||||| |||||||||||| ||||| ||||| ||||||||| ||| |||||| |||||    
T  5044218 ataatacttttattaaactgctcttactttataaaaaaaatacaaatttaaagttgtattaaaaattgtgtga 5044290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 34461595 - 34461647
Alignment:
Q  58 cttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    ||||||||| | ||| |||||||| |||||||||||||||||||| |||||||    
T  34461595 cttactttacatgaacaagacaaacttaaagttgcattgaaaattgtgtgaga 34461647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 3203368 - 3203325
Alignment:
Q  145 taaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||| |||| ||||||||||||||||| ||||||||||||    
T  3203368 taaagttgcattgaaaatgtaaagtgacatttattttgaaacaa 3203325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 110
Target Start/End: Complemental strand, 35052603 - 35052560
Alignment:
Q  67 taagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    ||||||||||| ||  ||||||||||||||||||||||||||||    
T  35052603 taagaaaaagataagtttaaagttgcattgaaaattatgtgaga 35052560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 181
Target Start/End: Complemental strand, 43938168 - 43938125
Alignment:
Q  138 aaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||    
T  43938168 aaaaaattaaagttctattcgaaatgtaaagtggcattcatttt 43938125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 2067770 - 2067725
Alignment:
Q  138 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaa 184  Q
    ||||||||||| |||||||| ||||||||| ||||||||||||||||    
T  2067770 aaaaaattaaaattgtattgaaaatgtaaa-tgacattcattttgaa 2067725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 189
Target Start/End: Complemental strand, 11335869 - 11335839
Alignment:
Q  159 aaatgtaaagtgacattcattttgaaacaaa 189  Q
    |||||||||||||||||||||||||||||||    
T  11335869 aaatgtaaagtgacattcattttgaaacaaa 11335839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 32061419 - 32061468
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaact 54  Q
    |||||||||||||| |||||||||||  || ||||||||||||| |||||    
T  32061419 attaagaaattgaacgaaataatcatcagacataacacttttactaaact 32061468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 3095473 - 3095525
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcc 57  Q
    ||||| |||| ||||||||||||||||  |||| |||||||||| ||||||||    
T  3095473 attaaaaaatagaatgaaataatcattaaatatgacacttttactaaactgcc 3095525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 3e-47; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 5 - 189
Target Start/End: Original strand, 1924634 - 1924819
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    ||||||||||  ||||||||||||||||||||||||  |||||| ||||| | ||||||||||||| |||| |||||||||||||||||||||||||| |    
T  1924634 attaagaaatataatgaaataatcattggatataacgtttttactaaacttctcttactttataaggaaaatacaaaattaaagttgcattgaaaattgt 1924733  T
Q  105 gt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    ||  |||||||| ||| |||||| ||||| |||  |||||||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  1924734 gtgagagaaaagttggagagggtgaagtt-gaaaaaaaaaattaaagttgtattgaaaatgtaaaatgacattcattttaaaacaaa 1924819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 17 - 188
Target Start/End: Original strand, 12828653 - 12828835
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt--gagaaaag 114  Q
    ||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||| |||  ||||||||    
T  12828653 aatgaaataatcattagacataacacttttactaaactgcccttactttataagaaaaagacaagcttaaagttgcattgaaaattgtgtgagagaaaag 12828752  T
Q  115 atg---------gggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
     ||           ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12828753 ttgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgaaattcattttgaaacaa 12828835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 26669056 - 26669247
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    ||||||||||||  ||||||||||| ||||||||||||  |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26669056 agattaagaaatataatgaaataattattggatataacgtttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 26669155  T
Q  103 atgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 183  Q
    ||||  |||||||| |||          |||| |||||||||| |  |||||||||||||||||||||||| ||||||||||||||||||||    
T  26669156 atgtgagagaaaagttggagattttattgaggataaagttggatgacaaaaattaaagttgtattggaaatataaagtgacattcattttga 26669247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 29915735 - 29915539
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcc-cttactttataagaaaaagacaaaattaaagttgcattgaaaatta 103  Q
    ||||||||||||||||||||||| ||| || ||||||||||||| ||||||||  |||||||||||||||||||||||  ||||||||||||| |||||     
T  29915735 attaagaaattgaatgaaataataattagaaataacacttttactaaactgccatttactttataagaaaaagacaaacataaagttgcattggaaattg 29915636  T
Q  104 tgt--gagaaaagatgg---------ggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||  |||||||| |||          |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29915635 tgtgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 29915539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 29927404 - 29927205
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    ||||||||| |||| |||||||||||||||| || ||||||||||||| ||  |  ||||||||||||||||||||||||| ||||||||||||||||||    
T  29927404 acagattaaaaaatagaatgaaataatcattagacataacacttttactaacatatccttactttataagaaaaagacaaacttaaagttgcattgaaaa 29927305  T
Q  101 tt--atgtgagaaaagatgg---------ggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
     |  ||| |||||||| |||          |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29927304 ctacatgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 29927205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 188
Target Start/End: Original strand, 31275613 - 31275796
Alignment:
Q  17 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgag--aaaag 114  Q
    |||||||||| |||| ||  ||||||||||||||||||||||||  |||||| |||||||||||| |||||||||||||||||||| ||||||  |||||    
T  31275613 aatgaaataaccattagacgtaacacttttaccaaactgcccttgttttatatgaaaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaag 31275712  T
Q  115 atgg---------ggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
     |||          |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31275713 ttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 31275796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 187
Target Start/End: Original strand, 23936543 - 23936735
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgccctt-actttataagaaaaagacaaaattaaagttgcattgaaaatta 103  Q
    |||||||||| |||||||||||||||| ||||||||| ||||||  || ||||||| ||||||||||||||| ||||| ||||||||||||||||||||     
T  23936543 attaagaaatggaatgaaataatcattagatataacatttttactgaattgccctttactttataagaaaaaaacaaatttaaagttgcattgaaaattg 23936642  T
Q  104 tgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 187  Q
    || |||||| | |||          ||||||||||||||||| ||||||| ||||||| |||| ||||||||||| |||||||||||||||||    
T  23936643 tgagagaaaggttggagtatatattgagggtaaagttggaagaaaaaaatgaaagttgcattgaaaatgtaaagtaacattcattttgaaaca 23936735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 32258909 - 32258720
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||| ||||||||||| ||||||||           ||||||||||||||||||||    
T  32258909 acagattaagaaatcgattgaaataatcattggatataacgcttttactaaactgcccttgctttataa-----------aattaaagttgcattgaaaa 32258821  T
Q  101 ttatgtgaga---aaagatgggg----------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 187  Q
    || |||||||   |||| ||| |          ||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32258820 ttgtgtgagagaaaaagttggagtattttttttaggttaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaaca 32258721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 34439368 - 34439567
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgccc-ttactttataagaaaaagacaaaattaaagttgcattgaaaatta 103  Q
    ||||||||||  ||||||||||||||| ||||||||| |||||  ||| ||||| ||| |||||||||||||||||||  ||||||||||||| |||||     
T  34439368 attaagaaatgaaatgaaataatcattagatataacatttttattaaattgccctttattttataagaaaaagacaaacataaagttgcattggaaattg 34439467  T
Q  104 tgt--gagaaaaga-----tgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 187  Q
    |||  |||||||||     |||          || ||||||||||||| |||| ||| |||||||||||||||||||||| |||||||||||||||||||    
T  34439468 tgtaagagaaaagaaaagttggagtatatattgaaggtaaagttggaa-gaaagaatgaaagttgtattggaaatgtaaaatgacattcattttgaaaca 34439566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 4123941 - 4124009
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||| ||| |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  4123941 gagggtaaagttgaaagaaaaaaattaaagttgtattaaaaatgtaaagtgacattcattttgaaacaa 4124009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 11785189 - 11785255
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11785189 gagggtaaagttggaag-aaaaaattaaagttgtattggaaatgtaaagtgaca-tcattttgaaacaa 11785255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 57 - 188
Target Start/End: Original strand, 17345146 - 17345290
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaa 143  Q
    |||||||||||||||| |||||||| || ||||||||||||||||| |||||||    |||| ||| |         |||||||||||||||| |||| |    
T  17345146 ccttactttataagaacaagacaaacttcaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaata 17345245  T
Q  144 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||||    
T  17345246 ttaaagttgtattagaaatgtaaagtgatattcattttaaaacaa 17345290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 6143147 - 6143082
Alignment:
Q  123 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  6143147 ggtaaagttggaagaaaaaaattaaagttgaattggaaatgtaaaatgacattcattttaaaacaa 6143082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 4132061 - 4132129
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||| ||| |||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  4132061 gagggtaaagttgaaagaaaaaaattaaagttgtattaaaaatgtaaagtgacattcattttaaaacaa 4132129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 34576610 - 34576542
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  34576610 gaggataaagttggaagaaaaaaattaaagttgtattggaaatgtaaaatgatattcattttaaaacaa 34576542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 6140662 - 6140598
Alignment:
Q  123 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||| ||||||    
T  6140662 ggtaaagttggaag-aaaaaattaaagttgaattggaaatgtaaagcgacattcattttaaaacaa 6140598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 10494760 - 10494916
Alignment:
Q  44 tttaccaaactgcccttactttataagaaaaa-gacaaaattaaagttgcattgaaaatt--atgtgagaaaagatgggga---------gggtaaagtt 131  Q
    ||||| ||||| |||||||||||||||||||| |||||| || |||||||||||||||||  ||| |||||||| |||            ||| ||||||    
T  10494760 tttactaaactacccttactttataagaaaaaagacaaactttaagttgcattgaaaattgtatgagagaaaagttggactatttattttgggcaaagtt 10494859  T
Q  132 ggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    | ||| ||||||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  10494860 gaaagaaaaaaattaaagttgaattggaaatgtaaactgacattcattttaaaacaa 10494916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 30627157 - 30627088
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    |||||||||||||  || |||||||||||||||||||| |||| |||||||||||| |||||||||||||    
T  30627157 gagggtaaagttgagagaaaaaaattaaagttgtattgaaaatataaagtgacatttattttgaaacaaa 30627088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 26189574 - 26189506
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||   ||||||||||||||||||    
T  26189574 gagggtaaagttggaagaaaaatattaaagttgcattggaaatgtaaaacaacattcattttgaaacaa 26189506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 3015964 - 3015919
Alignment:
Q  138 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 183  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  3015964 aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttga 3015919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 214
Target Start/End: Complemental strand, 8052410 - 8052317
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcat 214  Q
    ||||||||| |||| || ||||||||||||||||||| ||||| |||||||||||||||||| ||||||        ||||||||||||||||||    
T  8052410 gagggtaaaattgggag-aaaaaattaaagttgtattagaaatataaagtgacattcattttaaaacaatgtttttgggttaaagtgacactcat 8052317  T

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Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 30626918 - 30626867
Alignment:
Q  137 gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||||||||||| ||||||||||| | ||| ||||||||||||    
T  30626918 gaaaaaattaaagttgtattgaaaatgtaaagtaatatttattttgaaacaa 30626867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 110
Target Start/End: Complemental strand, 34576684 - 34576633
Alignment:
Q  59 ttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    |||||||| ||||| |||||||| |||||||||||||||||||| |||||||    
T  34576684 ttactttacaagaacaagacaaacttaaagttgcattgaaaattgtgtgaga 34576633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 4131908 - 4132008
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    ||||||||||  ||| |||||||||||  |||||||| |||||| ||||| || ||| |||||||||||||   |||| | || |||||||||||||| |    
T  4131908 attaagaaataaaattaaataatcattatatataacatttttactaaactacctttattttataagaaaaa---aaaacttaaattgcattgaaaattgt 4132004  T
Q  105 gtga 108  Q
    ||||    
T  4132005 gtga 4132008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 189
Target Start/End: Original strand, 19689927 - 19689989
Alignment:
Q  125 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 189  Q
    |||||||||||| ||| |  |||||||||||| |||||||||||| ||||||||||| |||||||    
T  19689927 taaagttggaagaaaata--taaagttgtattagaaatgtaaagtaacattcattttaaaacaaa 19689989  T

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Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 92
Target Start/End: Complemental strand, 6992543 - 6992508
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgc 92  Q
    ||||||||||||||||||||||||| ||||||||||    
T  6992543 ccttactttataagaaaaagacaaacttaaagttgc 6992508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 26189651 - 26189600
Alignment:
Q  57 ccttactttataagaaaaaga-caaaattaaagttgcattgaaaattatgtg 107  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||| ||||    
T  26189651 ccttactttataagaaaaaaaacaaacttaaagttgcattgaaaattgtgtg 26189600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 188
Target Start/End: Complemental strand, 19416887 - 19416857
Alignment:
Q  158 gaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||||||||||||||||||||||    
T  19416887 gaaatgtaaagtgacattcattttgaaacaa 19416857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 19689809 - 19689858
Alignment:
Q  7 taagaaattgaatgaaataatcattggatataacacttttaccaaactgc 56  Q
    |||||||| |||||||||||| ||| ||||||||| |||||| |||||||    
T  19689809 taagaaatggaatgaaataattattagatataacaattttactaaactgc 19689858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 25932771 - 25932718
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    ||||||||||||  || |||||||| |||||||| ||||||||||| |||||||    
T  25932771 ccttactttatagcaacaagacaaacttaaagttacattgaaaattgtgtgaga 25932718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 1737 - 1546
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 102  Q
    ||||||||||||  ||||||||||| ||||||||||||  |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1737 agattaagaaatataatgaaataattattggatataacgtttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 1638  T
Q  103 atgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 183  Q
    ||||  |||||||| |||          |||| |||||||||| |  |||||||||||||||||||||||| ||||||||||||||||||||    
T  1637 atgtgagagaaaagttggagattttattgaggataaagttggatgacaaaaattaaagttgtattggaaatataaagtgacattcattttga 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 60; Significance: 1e-25; HSPs: 4)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 1768 - 1689
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaa 82  Q
    ||||||||||||  ||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||    
T  1768 agattaagaaatgaaatgaaataatcattggatataacatttttactaaactgaccttactttataagaaaaagacaaaa 1689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 9507 - 9428
Alignment:
Q  3 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaa 82  Q
    ||||||||||||  ||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||    
T  9507 agattaagaaatgaaatgaaataatcattggatataacatttttactaaactgaccttactttataagaaaaagacaaaa 9428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 1691 - 1642
Alignment:
Q  138 aaaaaattaaagttgtatt--ggaaatgtaaagtgacattcattttgaaa 185  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  1691 aaaaaattaaagttgtattttggaaatgtaaagtgacattcattttgaaa 1642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 9430 - 9381
Alignment:
Q  138 aaaaaattaaagttgtatt--ggaaatgtaaagtgacattcattttgaaa 185  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  9430 aaaaaattaaagttgtattttggaaatgtaaagtgacattcattttgaaa 9381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 188
Target Start/End: Original strand, 70465 - 70609
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaa 143  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||    |||| ||| |         |||||||||||||||| ||||||    
T  70465 ccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaa 70564  T
Q  144 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||    
T  70565 ttaaagttgcattgaaaatgtaaagtgacattcattttgaaacaa 70609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 4068 - 4263
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaa-gacaaaattaaagttgcattgaaaatta 103  Q
    |||||||||| |||||||| |||||||  | |||||| |||||| ||| || ||||||||||||| ||||| |||||| ||||||||  |||||||||||    
T  4068 attaagaaatggaatgaaacaatcattatacataacatttttacgaaattgtccttactttataaaaaaaatgacaaacttaaagtttgattgaaaatta 4167  T
Q  104 tgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||  |||||||| |||          |||| |||||||||||| ||||||||||| ||||||| |||||||||||| ||||| ||||| ||||||    
T  4168 tgtgagagaaaagttggagtatttattgaggataaagttggaagaaaaaaattaaaattgtattagaaatgtaaagtaacatttattttaaaacaa 4263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 181
Target Start/End: Original strand, 16000 - 16186
Alignment:
Q  5 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 104  Q
    ||||| ||||| |||||||||||||||  |||||||| |||||| ||||| || ||||||||||| |||| |||||| |||||||||||||||||||| |    
T  16000 attaaaaaattaaatgaaataatcattatatataacatttttactaaactacctttactttataa-aaaatgacaaacttaaagttgcattgaaaattgt 16098  T
Q  105 gtgaga-aaagatggg----------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 181  Q
    |||||| |||| | ||          |||||||||||| |||| |||||||||||||||||||  |||| ||||| |||||| |||||    
T  16099 gtgagagaaaggttggaatatttattgagggtaaagtttgaagaaaaaaattaaagttgtattaaaaatataaagagacatttatttt 16186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 321792 - 321724
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  321792 gagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagcgacattcattttaaaacaa 321724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 321868 - 321815
Alignment:
Q  57 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    |||||||||||| ||| |||||||| ||||| |||||||||||||| |||||||    
T  321868 ccttactttataggaacaagacaaacttaaaattgcattgaaaattgtgtgaga 321815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 120 - 214
Target Start/End: Original strand, 13145 - 13239
Alignment:
Q  120 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcat 214  Q
    |||||||||||||| || ||||||||||| ||||||||||||||||||||||| |||||||| ||||||        ||||||||||||||||||    
T  13145 gagggtaaagttgggagaaaaaaattaaaattgtattggaaatgtaaagtgacgttcattttaaaacaattttttttggttaaagtgacactcat 13239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 13024 - 13116
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    |||||||||| |||  ||||||||||||||| || ||||||||||||| ||| |||          |||||||||||||||||||||||| |||||||||    
T  13024 acagattaaggaatgaaatgaaataatcattagacataacacttttactaaaatgct---------taagaaaaagacaaaattaaagttacattgaaaa 13114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 8345 - 8156
Alignment:
Q  1 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 100  Q
    ||||||||| |||| ||||||||||||||||||||||||  ||||||| ||||||||||| ||||||           |||||||||||||| |||||||    
T  8345 acagattaaaaaatggaatgaaataatcattggatataaggcttttactaaactgcccttgctttat-----------aaaattaaagttgctttgaaaa 8257  T
Q  101 ttatgt--gagaaaagatgg---------ggagggtaaagttggaag--gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 187  Q
    || |||  |||||||| |||          |||| |||||||| |||   |||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  8256 ttgtgtgagagaaaagttggagtattttttgaggttaaagttgaaagaaaaaaaaattaaagttgtattgaaaatgtaaattgacattcattttgaaaca 8157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 158229 - 158187
Alignment:
Q  68 aagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 110  Q
    |||||||||||||| ||||||||||||||||||||||| ||||    
T  158229 aagaaaaagacaaacttaaagttgcattgaaaattatgcgaga 158187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 7791 - 7852
Alignment:
Q  125 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    |||||||||||| ||||| | |||||||||||  ||||||||||||||||||||||| ||||||    
T  7791 taaagttggaag-aaaaattaaaagttgtatta-aaatgtaaagtgacattcattttaaaacaa 7852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 31667 - 31623
Alignment:
Q  144 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 188  Q
    ||||| || ||||||||||||||||| ||||||||||| ||||||    
T  31667 ttaaaattttattggaaatgtaaagtaacattcattttaaaacaa 31623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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