View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6184_low_43 (Length: 213)
Name: NF6184_low_43
Description: NF6184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6184_low_43 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 35699351 - 35699563
Alignment:
| Q |
1 |
ttagctttgctttatagttggtcctgatttcggtgctttatttgcatgtttatggataccttctgtagcgtttcagctggaaaagtactttacttttgcc |
100 |
Q |
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| T |
35699351 |
ttagctttggtttatagttggtcctgatttcggtgctttatttgcatgtttatggataccttctgtagcgtttcagctggaaaagtactttacttttgcc |
35699450 |
T |
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| Q |
101 |
ctctcatatcatatttgataaccagttaggagatttaatcctttaacatatttcaagcaccatattgcagttgcaagattacagtaggaatccatcaaca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35699451 |
ctctcatatcatatttgataaccagttaggagatttaatcctttaacatatttcaagcaccatattgcagttgcaagattacagtaggaatccatcaaca |
35699550 |
T |
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| Q |
201 |
gaatctgaggtta |
213 |
Q |
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||||||||||||| |
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| T |
35699551 |
gaatctgaggtta |
35699563 |
T |
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