View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6185_low_13 (Length: 236)
Name: NF6185_low_13
Description: NF6185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6185_low_13 |
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Alignment Details
Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 218
Target Start/End: Complemental strand, 38512856 - 38512656
Alignment:
| Q |
18 |
ccaccccggcaagcacaggtggttcatccaaccttagacctgtcatgatcaacaacgtgatgacggtgattttggccattgttcttgctgcagtacctgc |
117 |
Q |
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| T |
38512856 |
ccaccccggcaagcacaggtggttcatccaaccttagacctgtcatgatcaacaacgtgatgacggtgattttggccattgttcttgctgcagtacctgc |
38512757 |
T |
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| Q |
118 |
tggatttatcagcatttatacatgatgggttggatgtttgaatgcttcacctaaccacagtgaaatatggttagaaagtagtaaagtattggttggttga |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
38512756 |
tggatttatcagcatttatacatgatgggttggatgtttgaatgcttcacctaaccacagtgaaatatggttaggaagtagtaaagtattggttggttga |
38512657 |
T |
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| Q |
218 |
t |
218 |
Q |
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| T |
38512656 |
t |
38512656 |
T |
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