View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6187_high_7 (Length: 328)
Name: NF6187_high_7
Description: NF6187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6187_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 15 - 285
Target Start/End: Original strand, 34676455 - 34676726
Alignment:
| Q |
15 |
aattttcactaaaataaaggcactggtgacagaagaagtgaggtcagtgaggatcaggattcaggagcagttgagttttttattggcaacatgtcacaat |
114 |
Q |
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| T |
34676455 |
aattttcactaaaataaaggcactggtgacagaagaagtgaggtcagtgaggatcaggattcaggagcagttgagttttttattggcaacatgtcacaat |
34676554 |
T |
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| Q |
115 |
caaatacacagaaacaaagatcatgtatatttggatttggatggagttgaaactacaaagtatattaatggtcactctcaagtctcaatctcatatagag |
214 |
Q |
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| T |
34676555 |
caaatacacagaaacaaagatcatgtatatttggatttggatggagttgaaactacaaagtatattaatggtcactctcaagtctcaatctcatatagag |
34676654 |
T |
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| Q |
215 |
tttgtaagaacttttcatgtgtaaaagatatggtagtataat-aaaacaacttgttattagtgctactagtg |
285 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
34676655 |
tttgtaagaacttttcatgtgtaaaagatatggtagtataataaaaacaacttgttattagtgctactagtg |
34676726 |
T |
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