View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6188_high_27 (Length: 241)
Name: NF6188_high_27
Description: NF6188
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6188_high_27 |
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Alignment Details
Target: chr6 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 91 - 225
Target Start/End: Original strand, 6761995 - 6762129
Alignment:
| Q |
91 |
cctaagcttgtaattgctaaaagagaacaatctaacatagcatagcattaggagatgaagaagtgaaaaaacacacatgaagaagaggaggaacccgtat |
190 |
Q |
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| T |
6761995 |
cctaagcttgtaattgttaacagagaacaatctaacatagcatagcattaggagatgaagaagtgaaaaaacatacatgaagaagaggaggaacccgtat |
6762094 |
T |
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| Q |
191 |
ggcagctagggtttcataaccaaactaaacattac |
225 |
Q |
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||||||||||||||||||||||| |||||||||| |
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| T |
6762095 |
agcagctagggtttcataaccaaaataaacattac |
6762129 |
T |
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