View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6189_high_17 (Length: 228)
Name: NF6189_high_17
Description: NF6189
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6189_high_17 |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 37362652 - 37362433
Alignment:
| Q |
1 |
atgatatccttgattttgtcattgcattttgagttaattatgcttaattttgtatgggcaagtgcaaattaactacgactctataataagcttggtctaa |
100 |
Q |
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| T |
37362652 |
atgatatccttgattttgtcattgcattttgagttaattatgcttaattttgtatgggcaagtgcaaattaactacgactctataataagcttggtctaa |
37362553 |
T |
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| Q |
101 |
aattccagtctcacataagaaaacaacatgactaggagaagaaaagatcctactaaatgtgatctatcatgatatcgacagaaattagtcttcaatgcac |
200 |
Q |
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||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
37362552 |
aattctagtctcacataagaaaacaacgtgactaggagaagaaaagatcctactaaatgtgatctatcatgatatcgacagaaattagtcttcaatgtac |
37362453 |
T |
|
| Q |
201 |
ctttcacctaacatagttag |
220 |
Q |
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|||||||||||||||||||| |
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| T |
37362452 |
ctttcacctaacatagttag |
37362433 |
T |
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