View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6189_low_2 (Length: 491)

Name: NF6189_low_2
Description: NF6189
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6189_low_2
NF6189_low_2
[»] chr8 (46 HSPs)
chr8 (94-456)||(15245928-15246294)
chr8 (12-60)||(15246326-15246374)
chr8 (455-491)||(2733625-2733661)
chr8 (455-491)||(4430818-4430854)
chr8 (455-491)||(4977117-4977153)
chr8 (455-491)||(6317309-6317345)
chr8 (455-491)||(26690703-26690739)
chr8 (455-491)||(31639185-31639221)
chr8 (455-491)||(33067471-33067507)
chr8 (455-491)||(37295135-37295171)
chr8 (455-491)||(38070564-38070600)
chr8 (455-491)||(44814872-44814908)
chr8 (456-491)||(3054034-3054069)
chr8 (455-489)||(4312142-4312176)
chr8 (455-489)||(8547215-8547249)
chr8 (457-491)||(9569735-9569769)
chr8 (457-491)||(19649581-19649615)
chr8 (455-489)||(34711640-34711674)
chr8 (457-491)||(35810248-35810282)
chr8 (457-491)||(36372106-36372140)
chr8 (455-489)||(36586491-36586525)
chr8 (455-489)||(37708532-37708566)
chr8 (457-491)||(38953563-38953597)
chr8 (456-489)||(21530790-21530823)
chr8 (455-488)||(25213638-25213671)
chr8 (455-488)||(27928167-27928200)
chr8 (455-491)||(2442771-2442807)
chr8 (455-491)||(5895878-5895914)
chr8 (455-491)||(6845066-6845102)
chr8 (455-487)||(7432582-7432614)
chr8 (455-491)||(7772133-7772169)
chr8 (455-491)||(9998726-9998762)
chr8 (455-491)||(10096621-10096657)
chr8 (455-491)||(11100371-11100407)
chr8 (457-489)||(13634857-13634889)
chr8 (457-489)||(13735270-13735302)
chr8 (455-491)||(14188099-14188135)
chr8 (455-491)||(24654983-24655019)
chr8 (455-491)||(25199055-25199091)
chr8 (455-491)||(25250794-25250830)
chr8 (455-491)||(25893860-25893896)
chr8 (455-491)||(26675566-26675602)
chr8 (455-491)||(26737980-26738016)
chr8 (455-491)||(34143437-34143473)
chr8 (455-491)||(34540147-34540183)
chr8 (455-491)||(43820877-43820913)
[»] chr5 (28 HSPs)
chr5 (455-491)||(36136945-36136981)
chr5 (455-491)||(1244264-1244300)
chr5 (455-491)||(2103035-2103071)
chr5 (455-491)||(4164968-4165004)
chr5 (455-491)||(6672250-6672286)
chr5 (455-491)||(9902584-9902620)
chr5 (455-491)||(12878201-12878237)
chr5 (455-491)||(17869207-17869243)
chr5 (455-491)||(18473923-18473959)
chr5 (455-491)||(23311256-23311292)
chr5 (455-491)||(25328387-25328423)
chr5 (455-491)||(28143315-28143351)
chr5 (455-491)||(29119615-29119651)
chr5 (455-491)||(36569288-36569324)
chr5 (455-491)||(36726998-36727034)
chr5 (455-491)||(40595966-40596002)
chr5 (455-491)||(41562467-41562503)
chr5 (455-489)||(12707961-12707995)
chr5 (457-491)||(16906348-16906382)
chr5 (457-491)||(34930236-34930270)
chr5 (455-489)||(42337928-42337962)
chr5 (457-490)||(19867365-19867398)
chr5 (455-491)||(1650300-1650336)
chr5 (455-491)||(9054054-9054090)
chr5 (455-491)||(22620734-22620770)
chr5 (455-491)||(37940927-37940963)
chr5 (455-491)||(39143450-39143486)
chr5 (455-491)||(42448220-42448256)
[»] chr3 (34 HSPs)
chr3 (455-491)||(6083224-6083260)
chr3 (455-491)||(47408849-47408885)
chr3 (455-491)||(2687568-2687604)
chr3 (455-491)||(3917775-3917811)
chr3 (455-491)||(4232260-4232296)
chr3 (455-491)||(4833192-4833228)
chr3 (455-491)||(6583318-6583354)
chr3 (455-491)||(8381088-8381124)
chr3 (455-491)||(11312599-11312635)
chr3 (455-491)||(13525178-13525214)
chr3 (455-491)||(24751762-24751798)
chr3 (455-491)||(29212148-29212184)
chr3 (455-491)||(32961061-32961097)
chr3 (455-490)||(24910372-24910407)
chr3 (457-491)||(25118789-25118823)
chr3 (455-489)||(41464673-41464707)
chr3 (455-489)||(44037529-44037563)
chr3 (15-52)||(14903183-14903220)
chr3 (455-488)||(30553054-30553087)
chr3 (455-491)||(1242226-1242262)
chr3 (455-491)||(4976791-4976827)
chr3 (455-491)||(10473997-10474033)
chr3 (455-491)||(16687631-16687667)
chr3 (455-487)||(21402745-21402777)
chr3 (455-491)||(22371459-22371495)
chr3 (455-491)||(24250734-24250770)
chr3 (455-491)||(24650630-24650666)
chr3 (455-491)||(27396863-27396899)
chr3 (455-491)||(34397689-34397725)
chr3 (455-491)||(38127925-38127961)
chr3 (455-491)||(41921515-41921551)
chr3 (455-491)||(46838810-46838846)
chr3 (455-491)||(53583970-53584006)
chr3 (455-491)||(54097523-54097559)
[»] chr2 (27 HSPs)
chr2 (455-491)||(6731551-6731587)
chr2 (455-491)||(2287392-2287428)
chr2 (455-491)||(3048551-3048587)
chr2 (455-491)||(7975097-7975133)
chr2 (455-491)||(15897223-15897259)
chr2 (455-491)||(20251568-20251604)
chr2 (455-491)||(23080181-23080217)
chr2 (455-491)||(32023261-32023297)
chr2 (455-491)||(33607052-33607088)
chr2 (455-491)||(34667053-34667089)
chr2 (455-491)||(36754824-36754860)
chr2 (455-491)||(38490483-38490519)
chr2 (455-491)||(42160340-42160376)
chr2 (458-489)||(11091671-11091702)
chr2 (455-490)||(24381254-24381289)
chr2 (455-490)||(34481755-34481790)
chr2 (455-489)||(13268060-13268094)
chr2 (455-489)||(18368803-18368837)
chr2 (455-489)||(40592322-40592356)
chr2 (455-491)||(4014896-4014932)
chr2 (455-491)||(12236130-12236166)
chr2 (455-491)||(15488758-15488794)
chr2 (455-491)||(35476573-35476609)
chr2 (457-489)||(38463150-38463182)
chr2 (455-491)||(39070028-39070064)
chr2 (455-491)||(39310375-39310411)
chr2 (455-491)||(42200945-42200981)
[»] chr1 (28 HSPs)
chr1 (455-491)||(15906250-15906286)
chr1 (455-490)||(35010673-35010708)
chr1 (455-491)||(10635498-10635534)
chr1 (455-491)||(19338261-19338297)
chr1 (455-491)||(20164156-20164192)
chr1 (455-491)||(24119665-24119701)
chr1 (455-491)||(28999383-28999419)
chr1 (455-491)||(29005099-29005135)
chr1 (455-491)||(40809296-40809332)
chr1 (455-491)||(40958657-40958693)
chr1 (455-491)||(42631068-42631104)
chr1 (455-491)||(43086554-43086590)
chr1 (455-491)||(43676107-43676143)
chr1 (455-491)||(48314176-48314212)
chr1 (455-491)||(48391965-48392001)
chr1 (455-491)||(49500870-49500906)
chr1 (455-491)||(3315803-3315839)
chr1 (455-491)||(5790067-5790103)
chr1 (455-491)||(13555807-13555843)
chr1 (457-489)||(15952917-15952949)
chr1 (455-491)||(17068161-17068197)
chr1 (455-491)||(26261376-26261412)
chr1 (455-491)||(32880662-32880698)
chr1 (456-488)||(33845690-33845722)
chr1 (456-488)||(33948256-33948288)
chr1 (455-491)||(41445113-41445149)
chr1 (455-491)||(48731839-48731875)
chr1 (455-491)||(49948250-49948286)
[»] chr4 (40 HSPs)
chr4 (456-491)||(25586410-25586445)
chr4 (455-491)||(1033532-1033568)
chr4 (455-491)||(1982570-1982606)
chr4 (455-491)||(5397023-5397059)
chr4 (455-491)||(9569484-9569520)
chr4 (455-491)||(12821174-12821210)
chr4 (455-491)||(23974725-23974761)
chr4 (455-491)||(26440976-26441012)
chr4 (455-491)||(29648773-29648809)
chr4 (455-491)||(30044667-30044703)
chr4 (455-491)||(35828283-35828319)
chr4 (455-491)||(36526224-36526260)
chr4 (455-491)||(37166147-37166183)
chr4 (455-491)||(42154221-42154257)
chr4 (455-491)||(42856572-42856608)
chr4 (455-491)||(46488200-46488236)
chr4 (455-491)||(47462119-47462155)
chr4 (455-491)||(49535894-49535930)
chr4 (455-491)||(49882792-49882828)
chr4 (455-491)||(51425339-51425375)
chr4 (455-491)||(54907975-54908011)
chr4 (456-491)||(18371356-18371391)
chr4 (456-491)||(34684212-34684247)
chr4 (455-489)||(3084327-3084361)
chr4 (456-486)||(9038294-9038324)
chr4 (457-491)||(24550824-24550858)
chr4 (455-489)||(24712097-24712131)
chr4 (457-491)||(37050712-37050746)
chr4 (457-491)||(42412071-42412105)
chr4 (457-491)||(51281477-51281511)
chr4 (455-491)||(3848901-3848937)
chr4 (455-491)||(7512776-7512812)
chr4 (455-491)||(18813379-18813415)
chr4 (455-491)||(28033201-28033237)
chr4 (455-491)||(29428064-29428100)
chr4 (455-491)||(32662685-32662721)
chr4 (455-491)||(35318549-35318585)
chr4 (455-491)||(49319740-49319776)
chr4 (455-491)||(51564474-51564510)
chr4 (455-491)||(52556466-52556502)
[»] scaffold0050 (1 HSPs)
scaffold0050 (15-52)||(65250-65287)
[»] scaffold0457 (1 HSPs)
scaffold0457 (455-491)||(6788-6824)
[»] scaffold0432 (1 HSPs)
scaffold0432 (455-491)||(9376-9412)
[»] scaffold0402 (1 HSPs)
scaffold0402 (455-491)||(1324-1360)
[»] scaffold0287 (1 HSPs)
scaffold0287 (455-491)||(1141-1177)
[»] scaffold0013 (1 HSPs)
scaffold0013 (455-491)||(90578-90614)
[»] chr7 (34 HSPs)
chr7 (455-491)||(2354880-2354916)
chr7 (455-491)||(3497600-3497636)
chr7 (455-491)||(4887596-4887632)
chr7 (455-491)||(10061099-10061135)
chr7 (455-491)||(10703974-10704010)
chr7 (455-491)||(27396397-27396433)
chr7 (455-491)||(33512806-33512842)
chr7 (455-491)||(35157167-35157203)
chr7 (455-491)||(45236939-45236975)
chr7 (455-491)||(48612526-48612562)
chr7 (455-491)||(48729767-48729803)
chr7 (457-491)||(5508696-5508730)
chr7 (453-491)||(16816698-16816736)
chr7 (457-491)||(37410785-37410819)
chr7 (456-489)||(19563180-19563213)
chr7 (455-491)||(1323692-1323728)
chr7 (455-491)||(1573924-1573960)
chr7 (455-491)||(4106563-4106599)
chr7 (455-487)||(4674396-4674428)
chr7 (455-491)||(6596551-6596587)
chr7 (455-491)||(7312536-7312572)
chr7 (455-491)||(9380000-9380036)
chr7 (455-491)||(17895643-17895679)
chr7 (455-491)||(18944933-18944969)
chr7 (459-491)||(19258437-19258469)
chr7 (455-491)||(19306721-19306757)
chr7 (455-491)||(21226074-21226110)
chr7 (455-491)||(29151592-29151628)
chr7 (455-491)||(31717306-31717342)
chr7 (455-491)||(35849304-35849340)
chr7 (455-487)||(36280012-36280044)
chr7 (455-491)||(40809054-40809090)
chr7 (455-491)||(42557585-42557621)
chr7 (457-489)||(45041818-45041850)
[»] chr6 (19 HSPs)
chr6 (455-491)||(1241604-1241640)
chr6 (455-491)||(2314682-2314718)
chr6 (455-491)||(8448225-8448261)
chr6 (455-491)||(8457029-8457065)
chr6 (455-491)||(12795102-12795138)
chr6 (455-491)||(17534606-17534642)
chr6 (455-491)||(18861850-18861886)
chr6 (455-491)||(31205266-31205302)
chr6 (456-491)||(735455-735490)
chr6 (455-490)||(32107919-32107954)
chr6 (455-489)||(4083596-4083630)
chr6 (455-489)||(8939635-8939669)
chr6 (455-489)||(10181054-10181088)
chr6 (455-491)||(4480483-4480519)
chr6 (455-491)||(7098972-7099008)
chr6 (455-491)||(8329641-8329677)
chr6 (455-491)||(10263154-10263190)
chr6 (455-491)||(13540244-13540280)
chr6 (455-491)||(21513081-21513117)
[»] scaffold0882 (1 HSPs)
scaffold0882 (457-491)||(3780-3814)
[»] scaffold0061 (1 HSPs)
scaffold0061 (457-491)||(8942-8976)
[»] scaffold0778 (1 HSPs)
scaffold0778 (455-491)||(827-863)
[»] scaffold0595 (1 HSPs)
scaffold0595 (455-491)||(354-390)
[»] scaffold0179 (1 HSPs)
scaffold0179 (455-487)||(4102-4134)
[»] scaffold0008 (1 HSPs)
scaffold0008 (455-491)||(39396-39432)


Alignment Details
Target: chr8 (Bit Score: 238; Significance: 1e-131; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 94 - 456
Target Start/End: Complemental strand, 15246294 - 15245928
Alignment:
Q  94 atagaacatacttttctttacaatggtcaatggtaaatgttccatttatgtttgctnnnnnnnngttccatttatgtannnnnnnnnagggg--acatgt 191  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||||||||||||||         |||||  || |||    
T  15246294 atagaacatacttttctttacaatggtcaatggtacatgttccatttatgtttgctagaaaaaagttccatttatgtatatttttttagggggaacgtgt 15246195  T
Q  192 ttatattatttctttaactatggatgtggttatccatgttaaagcatgaacgatcacacttgtttgtcttcatctaaatttgataaaatagttttacaaa 291  Q
    ||||||||||||||||  ||||||||||||||||| |||||||||||||| | ||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  15246194 ttatattatttctttagttatggatgtggttatccttgttaaagcatgaatggtcacatttgtttgtcttcatctaaattcgataaaagagttttacaaa 15246095  T
Q  292 aataaataaattacgacgacgtttacaaatggacattacaacacgaaattttgtaacgtcattgcttccaatgtggaaataatcaacaacttaatttgca 391  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15246094 aataaataaattacgacgacgtttataaatggacattacaacacgaaattttgtaatgtcattgcttccaatgtggaaataatcaacaacttaatttgca 15245995  T
Q  392 tttatgacaaaatcgacattattaagttgtagatcattc--atacaattggtagaataataccaacc 456  Q
    ||||||||||||||||||||||||||||| ||||||| |  ||||||||||||||||||||||||||    
T  15245994 tttatgacaaaatcgacattattaagttgaagatcatgcatatacaattggtagaataataccaacc 15245928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 15246374 - 15246326
Alignment:
Q  12 ataggtgacctcctgaaaaatctttgtgttgcacctcttttacctaacc 60  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||    
T  15246374 ataggtgacctcctgaaaagtccttgtgttgcacctcttttacctaacc 15246326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 2733625 - 2733661
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  2733625 cctagctcaactggcaaaatgccgaaattgttaggcc 2733661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 4430854 - 4430818
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  4430854 cctagctcaactggcaaaatgccgaaattgttaggcc 4430818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 4977153 - 4977117
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  4977153 cctagctcaactggcaaaatgccgaaattgttaggcc 4977117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 6317309 - 6317345
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  6317309 cctagctcaactggcaaaatgccgaaattgttaggcc 6317345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 26690703 - 26690739
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  26690703 cctagctcaactggcaaaatgccgaaattgttaggcc 26690739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 31639221 - 31639185
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||| ||||||||||||||||||||||||||||||||    
T  31639221 cctaactcaactagcaaaatgccgaaattgttaggcc 31639185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 33067507 - 33067471
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  33067507 cctagctcaactggcaaaatgccgaaattgttaggcc 33067471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 37295135 - 37295171
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  37295135 cctagctcaactggcaaaatgccgaaattgttaggcc 37295171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 38070600 - 38070564
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  38070600 cctagctcaactggcaaaatgccgaaattgttaggcc 38070564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 44814872 - 44814908
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  44814872 cctagctcaactggcaaaatgccgaaattgttaggcc 44814908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 491
Target Start/End: Original strand, 3054034 - 3054069
Alignment:
Q  456 ctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||||||||| ||||||||||||||||||||||||    
T  3054034 ctagctcaactggcaaaatgccgaaattgttaggcc 3054069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 455 - 489
Target Start/End: Original strand, 4312142 - 4312176
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||||| ||||||||||||||||||||||    
T  4312142 cctagctcaactggcaaaatgccgaaattgttagg 4312176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 455 - 489
Target Start/End: Complemental strand, 8547249 - 8547215
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||||| ||||||||||||||||||||||    
T  8547249 cctagctcaactggcaaaatgccgaaattgttagg 8547215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 457 - 491
Target Start/End: Original strand, 9569735 - 9569769
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||| ||||||||||||||||||||||||    
T  9569735 tagctcaactggcaaaatgccgaaattgttaggcc 9569769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 457 - 491
Target Start/End: Complemental strand, 19649615 - 19649581
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||| ||||||||||||||||||||||||    
T  19649615 tagctcaactggcaaaatgccgaaattgttaggcc 19649581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 455 - 489
Target Start/End: Complemental strand, 34711674 - 34711640
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||||| ||||||||||||||||||||||    
T  34711674 cctagctcaactggcaaaatgccgaaattgttagg 34711640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 457 - 491
Target Start/End: Original strand, 35810248 - 35810282
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||| ||||||||||||||||||||||||    
T  35810248 tagctcaactggcaaaatgccgaaattgttaggcc 35810282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 457 - 491
Target Start/End: Complemental strand, 36372140 - 36372106
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||| ||||||||||||||||||||||||    
T  36372140 tagctcaactggcaaaatgccgaaattgttaggcc 36372106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 455 - 489
Target Start/End: Original strand, 36586491 - 36586525
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||||| ||||||||||||||||||||||    
T  36586491 cctagctcaactggcaaaatgccgaaattgttagg 36586525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 455 - 489
Target Start/End: Complemental strand, 37708566 - 37708532
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||||| ||||||||||||||||||||||    
T  37708566 cctagctcaactggcaaaatgccgaaattgttagg 37708532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 457 - 491
Target Start/End: Complemental strand, 38953597 - 38953563
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||| ||||||||||||||||||||||||    
T  38953597 tagctcaactggcaaaatgccgaaattgttaggcc 38953563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 489
Target Start/End: Original strand, 21530790 - 21530823
Alignment:
Q  456 ctagctcaactagcaaaatgccgaaattgttagg 489  Q
    ||||||||||||||||||| ||||||||||||||    
T  21530790 ctagctcaactagcaaaataccgaaattgttagg 21530823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 488
Target Start/End: Original strand, 25213638 - 25213671
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttag 488  Q
    |||||||||||| |||||||||||||||||||||    
T  25213638 cctagctcaactggcaaaatgccgaaattgttag 25213671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 488
Target Start/End: Original strand, 27928167 - 27928200
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttag 488  Q
    |||||||||||| |||||||||||||||||||||    
T  27928167 cctagctcaactggcaaaatgccgaaattgttag 27928200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 2442771 - 2442807
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||| |||||||||||||||    
T  2442771 cctagctcaactggcaaaatgtcgaaattgttaggcc 2442807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 5895914 - 5895878
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||| |||||||||||||||    
T  5895914 cctagctcaactggcaaaatgtcgaaattgttaggcc 5895878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 6845102 - 6845066
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||| | ||||||||||||||||||||||||    
T  6845102 cctagctcaattggcaaaatgccgaaattgttaggcc 6845066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 487
Target Start/End: Complemental strand, 7432614 - 7432582
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgtta 487  Q
    |||||||||||| ||||||||||||||||||||    
T  7432614 cctagctcaactggcaaaatgccgaaattgtta 7432582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 7772169 - 7772133
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| | ||||||||||||||||||||||    
T  7772169 cctagctcaactggtaaaatgccgaaattgttaggcc 7772133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 9998762 - 9998726
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  9998762 cctagttcaactggcaaaatgccgaaattgttaggcc 9998726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 10096621 - 10096657
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||| |||||||||||||||    
T  10096621 cctagctcaactggcaaaatgtcgaaattgttaggcc 10096657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 11100407 - 11100371
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| | ||||||||||||||||||||||    
T  11100407 cctagctcaactggaaaaatgccgaaattgttaggcc 11100371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 457 - 489
Target Start/End: Original strand, 13634857 - 13634889
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||| ||||||||||||||||||||||    
T  13634857 tagctcaactggcaaaatgccgaaattgttagg 13634889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 457 - 489
Target Start/End: Original strand, 13735270 - 13735302
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||| ||||||||||||||||||||||    
T  13735270 tagctcaactggcaaaatgccgaaattgttagg 13735302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 14188099 - 14188135
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||| |||||||||||||||    
T  14188099 cctagctcaactggcaaaatgtcgaaattgttaggcc 14188135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 24654983 - 24655019
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||||| |||||||||||||    
T  24654983 cctagctcaactggcaaaatgccaaaattgttaggcc 24655019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 25199055 - 25199091
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| | ||||||||||||||||||||||    
T  25199055 cctagctcaactggtaaaatgccgaaattgttaggcc 25199091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 25250794 - 25250830
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||||| |||||||||||||    
T  25250794 cctagctcaactggcaaaatgccaaaattgttaggcc 25250830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 25893860 - 25893896
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  25893860 cctagctcaactggcaaaatgctgaaattgttaggcc 25893896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 26675566 - 26675602
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| | ||||||||||||||||||||||    
T  26675566 cctagctcaactggtaaaatgccgaaattgttaggcc 26675602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 26737980 - 26738016
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| | ||||||||||||||||||||||    
T  26737980 cctagctcaactggtaaaatgccgaaattgttaggcc 26738016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 34143473 - 34143437
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  34143473 cctaactcaattagcaaaatgccgaaattgttaggcc 34143437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 34540183 - 34540147
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  34540183 cctagttcaactggcaaaatgccgaaattgttaggcc 34540147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 43820877 - 43820913
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  43820877 cctaactcaactggcaaaatgccgaaattgttaggcc 43820913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 36136981 - 36136945
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||||||||||||||||||||||||||||    
T  36136981 cctagctcaactagcaaaatgccgaaattgttaggcc 36136945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 1244300 - 1244264
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1244300 cctagctcaactggcaaaatgccgaaattgttaggcc 1244264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 2103035 - 2103071
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  2103035 cctagctcaactggcaaaatgccgaaattgttaggcc 2103071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 4164968 - 4165004
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  4164968 cctagctcaactggcaaaatgccgaaattgttaggcc 4165004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 6672250 - 6672286
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  6672250 cctagctcaactggcaaaatgccgaaattgttaggcc 6672286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 9902620 - 9902584
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  9902620 cctagctcaactggcaaaatgccgaaattgttaggcc 9902584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 12878237 - 12878201
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  12878237 cctagctcaactggcaaaatgccgaaattgttaggcc 12878201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 17869243 - 17869207
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  17869243 cctagctcaactggcaaaatgccgaaattgttaggcc 17869207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 18473923 - 18473959
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  18473923 cctagctcaactggcaaaatgccgaaattgttaggcc 18473959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 23311292 - 23311256
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  23311292 cctagctcaactggcaaaatgccgaaattgttaggcc 23311256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 25328423 - 25328387
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  25328423 cctagctcaactggcaaaatgccgaaattgttaggcc 25328387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 28143351 - 28143315
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  28143351 cctagctcaactggcaaaatgccgaaattgttaggcc 28143315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 29119615 - 29119651
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  29119615 cctagctcaactggcaaaatgccgaaattgttaggcc 29119651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 36569288 - 36569324
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  36569288 cctagctcaactggcaaaatgccgaaattgttaggcc 36569324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 36726998 - 36727034
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  36726998 cctagctcaactggcaaaatgccgaaattgttaggcc 36727034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 40595966 - 40596002
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  40595966 cctagctcaactggcaaaatgccgaaattgttaggcc 40596002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 41562467 - 41562503
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  41562467 cctagctcaactggcaaaatgccgaaattgttaggcc 41562503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 455 - 489
Target Start/End: Complemental strand, 12707995 - 12707961
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||||| ||||||||||||||||||||||    
T  12707995 cctagctcaactggcaaaatgccgaaattgttagg 12707961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 457 - 491
Target Start/End: Original strand, 16906348 - 16906382
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||| ||||||||||||||||||||||||    
T  16906348 tagctcaactggcaaaatgccgaaattgttaggcc 16906382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 457 - 491
Target Start/End: Original strand, 34930236 - 34930270
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||| ||||||||||||||||||||||||    
T  34930236 tagctcaactggcaaaatgccgaaattgttaggcc 34930270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 455 - 489
Target Start/End: Complemental strand, 42337962 - 42337928
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||||| ||||||||||||||||||||||    
T  42337962 cctagctcaactggcaaaatgccgaaattgttagg 42337928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 490
Target Start/End: Complemental strand, 19867398 - 19867365
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttaggc 490  Q
    |||||||||||| |||||||||||||||||||||    
T  19867398 tagctcaactagtaaaatgccgaaattgttaggc 19867365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 1650300 - 1650336
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||  ||||||||||||||||||||||||    
T  1650300 cctagctcaacctgcaaaatgccgaaattgttaggcc 1650336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 9054090 - 9054054
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  9054090 cctagctcaactggcaaaataccgaaattgttaggcc 9054054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 22620770 - 22620734
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||||||||||  |||||||||||||||||||||||    
T  22620770 cctagctcaactgacaaaatgccgaaattgttaggcc 22620734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 37940927 - 37940963
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||| |||||||||||||||    
T  37940927 cctagctcaactggcaaaatgtcgaaattgttaggcc 37940963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 39143450 - 39143486
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||| |||||||||||||||    
T  39143450 cctagctcaactggcaaaatgtcgaaattgttaggcc 39143486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 42448220 - 42448256
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||| |||||||||||||||    
T  42448220 cctagctcaactggcaaaatgtcgaaattgttaggcc 42448256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 6083260 - 6083224
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||||||||||||||||||||||||||||    
T  6083260 cctagctcaactagcaaaatgccgaaattgttaggcc 6083224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 47408849 - 47408885
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||||||||||||||||||||||||||||    
T  47408849 cctagctcaactagcaaaatgccgaaattgttaggcc 47408885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 2687568 - 2687604
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  2687568 cctagctcaactggcaaaatgccgaaattgttaggcc 2687604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 3917775 - 3917811
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  3917775 cctagctcaactggcaaaatgccgaaattgttaggcc 3917811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 4232296 - 4232260
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  4232296 cctagctcaactggcaaaatgccgaaattgttaggcc 4232260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 4833228 - 4833192
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  4833228 cctagctcaactggcaaaatgccgaaattgttaggcc 4833192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 6583354 - 6583318
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  6583354 cctagctcaactggcaaaatgccgaaattgttaggcc 6583318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 8381088 - 8381124
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  8381088 cctagctcaactggcaaaatgccgaaattgttaggcc 8381124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 11312599 - 11312635
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  11312599 cctagctcaactggcaaaatgccgaaattgttaggcc 11312635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 13525178 - 13525214
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  13525178 cctagctcaactggcaaaatgccgaaattgttaggcc 13525214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 24751762 - 24751798
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24751762 cctagctcaactggcaaaatgccgaaattgttaggcc 24751798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 29212184 - 29212148
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  29212184 cctagctcaactggcaaaatgccgaaattgttaggcc 29212148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 32961097 - 32961061
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  32961097 cctagctcaactggcaaaatgccgaaattgttaggcc 32961061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 490
Target Start/End: Complemental strand, 24910407 - 24910372
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggc 490  Q
    |||||||||||| |||||||||||||||||||||||    
T  24910407 cctagctcaactggcaaaatgccgaaattgttaggc 24910372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 457 - 491
Target Start/End: Complemental strand, 25118823 - 25118789
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||||||||||||||||| |||||||||||||||    
T  25118823 tagctcaactagcaaaatgtcgaaattgttaggcc 25118789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 455 - 489
Target Start/End: Original strand, 41464673 - 41464707
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||||| ||||||||||||||||||||||    
T  41464673 cctagctcaactggcaaaatgccgaaattgttagg 41464707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 455 - 489
Target Start/End: Complemental strand, 44037563 - 44037529
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||||| ||||||||||||||||||||||    
T  44037563 cctagctcaactggcaaaatgccgaaattgttagg 44037529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 14903183 - 14903220
Alignment:
Q  15 ggtgacctcctgaaaaatctttgtgttgcacctctttt 52  Q
    |||||||||||||||| || ||||||||||||||||||    
T  14903183 ggtgacctcctgaaaagtccttgtgttgcacctctttt 14903220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 488
Target Start/End: Complemental strand, 30553087 - 30553054
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttag 488  Q
    |||||||||||| |||||||||||||||||||||    
T  30553087 cctagctcaactggcaaaatgccgaaattgttag 30553054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 1242226 - 1242262
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||||||||||| |||||||    
T  1242226 cctagctcaactggcaaaatgccgaaattattaggcc 1242262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 4976827 - 4976791
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||||| |||||||||||||    
T  4976827 cctagctcaactggcaaaatgccaaaattgttaggcc 4976791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 10474033 - 10473997
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  10474033 cctagctcaactggcaaaatgctgaaattgttaggcc 10473997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 16687667 - 16687631
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||  ||||||||||||||||||||||||    
T  16687667 cctagctcaaccggcaaaatgccgaaattgttaggcc 16687631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 487
Target Start/End: Complemental strand, 21402777 - 21402745
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgtta 487  Q
    |||||||||||| ||||||||||||||||||||    
T  21402777 cctagctcaactggcaaaatgccgaaattgtta 21402745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 22371459 - 22371495
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  22371459 cctacctcaactggcaaaatgccgaaattgttaggcc 22371495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 24250734 - 24250770
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||| | ||||||||||||||||||||||||    
T  24250734 cctagctcaattggcaaaatgccgaaattgttaggcc 24250770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 24650666 - 24650630
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  24650666 cctacctcaactggcaaaatgccgaaattgttaggcc 24650630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 27396863 - 27396899
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||||||||||  |||||||||||||||||||||||    
T  27396863 cctagctcaactgacaaaatgccgaaattgttaggcc 27396899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 34397689 - 34397725
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  34397689 cctagttcaactggcaaaatgccgaaattgttaggcc 34397725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 38127961 - 38127925
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||| |||||||||||||||    
T  38127961 cctagctcaactggcaaaatgtcgaaattgttaggcc 38127925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 41921515 - 41921551
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| | ||||||||||||||||||||||    
T  41921515 cctagctcaactggtaaaatgccgaaattgttaggcc 41921551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 46838846 - 46838810
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| | ||||||||||||||||||||||    
T  46838846 cctagctcaactggaaaaatgccgaaattgttaggcc 46838810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 53583970 - 53584006
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||| |||||||||||||||    
T  53583970 cctagctcaactggcaaaatgtcgaaattgttaggcc 53584006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 54097559 - 54097523
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||| | ||||||||||||||||||||||||    
T  54097559 cctagctcaaatggcaaaatgccgaaattgttaggcc 54097523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 6731551 - 6731587
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||||||||||||||||||||||||||||    
T  6731551 cctagctcaactagcaaaatgccgaaattgttaggcc 6731587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 2287428 - 2287392
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  2287428 cctagctcaactggcaaaatgccgaaattgttaggcc 2287392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 3048551 - 3048587
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||||||||||||||||||| |||||||||||||||    
T  3048551 cctagctcaactagcaaaatgtcgaaattgttaggcc 3048587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 7975133 - 7975097
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  7975133 cctagctcaactggcaaaatgccgaaattgttaggcc 7975097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 15897223 - 15897259
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  15897223 cctagctcaactggcaaaatgccgaaattgttaggcc 15897259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 20251604 - 20251568
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  20251604 cctagctcaactggcaaaatgccgaaattgttaggcc 20251568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 23080217 - 23080181
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  23080217 cctagctcaactggcaaaatgccgaaattgttaggcc 23080181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 32023261 - 32023297
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  32023261 cctagctcaactggcaaaatgccgaaattgttaggcc 32023297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 33607052 - 33607088
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  33607052 cctagctcaactggcaaaatgccgaaattgttaggcc 33607088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 34667053 - 34667089
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  34667053 cctagctcaactggcaaaatgccgaaattgttaggcc 34667089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 36754860 - 36754824
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  36754860 cctagctcaactggcaaaatgccgaaattgttaggcc 36754824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 38490519 - 38490483
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  38490519 cctagctcaactggcaaaatgccgaaattgttaggcc 38490483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 42160376 - 42160340
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  42160376 cctagctcaactggcaaaatgccgaaattgttaggcc 42160340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 489
Target Start/End: Complemental strand, 11091702 - 11091671
Alignment:
Q  458 agctcaactagcaaaatgccgaaattgttagg 489  Q
    ||||||||||||||||||||||||||||||||    
T  11091702 agctcaactagcaaaatgccgaaattgttagg 11091671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 490
Target Start/End: Original strand, 24381254 - 24381289
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggc 490  Q
    ||||||||||||||||||||| ||||||||||||||    
T  24381254 cctagctcaactagcaaaatgtcgaaattgttaggc 24381289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 490
Target Start/End: Complemental strand, 34481790 - 34481755
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggc 490  Q
    |||||||||||| |||||||||||||||||||||||    
T  34481790 cctagctcaactggcaaaatgccgaaattgttaggc 34481755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 455 - 489
Target Start/End: Complemental strand, 13268094 - 13268060
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||||| ||||||||||||||||||||||    
T  13268094 cctagctcaactggcaaaatgccgaaattgttagg 13268060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 455 - 489
Target Start/End: Original strand, 18368803 - 18368837
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||||| ||||||||||||||||||||||    
T  18368803 cctagctcaactggcaaaatgccgaaattgttagg 18368837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 455 - 489
Target Start/End: Original strand, 40592322 - 40592356
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||||| ||||||||||||||||||||||    
T  40592322 cctagctcaactggcaaaatgccgaaattgttagg 40592356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 4014932 - 4014896
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||||||||||  |||||||||||||||||||||||    
T  4014932 cctagctcaactgacaaaatgccgaaattgttaggcc 4014896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 12236130 - 12236166
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| | ||||||||||||||||||||||    
T  12236130 cctagctcaactggtaaaatgccgaaattgttaggcc 12236166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 15488758 - 15488794
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||||  ||||||||||||||||||||||    
T  15488758 cctagctcaactaataaaatgccgaaattgttaggcc 15488794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 35476609 - 35476573
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||| |||||||||||||||    
T  35476609 cctagctcaactggcaaaatgtcgaaattgttaggcc 35476573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 457 - 489
Target Start/End: Original strand, 38463150 - 38463182
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||| ||||||||||||||||||||||    
T  38463150 tagctcaactggcaaaatgccgaaattgttagg 38463182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 39070028 - 39070064
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| | ||||||||||||||||||||||    
T  39070028 cctagctcaactggtaaaatgccgaaattgttaggcc 39070064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 39310375 - 39310411
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||||||||||||||||||  |||||||||||||||    
T  39310375 cctagctcaactagcaaaatatcgaaattgttaggcc 39310411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 42200981 - 42200945
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||||| |||||||||||||    
T  42200981 cctagctcaactggcaaaatgccaaaattgttaggcc 42200945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 15906286 - 15906250
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||||||||||||||||||||||||||||    
T  15906286 cctagctcaactagcaaaatgccgaaattgttaggcc 15906250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 455 - 490
Target Start/End: Complemental strand, 35010708 - 35010673
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggc 490  Q
    ||||||||||||||||||||||||||||||||||||    
T  35010708 cctagctcaactagcaaaatgccgaaattgttaggc 35010673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 10635498 - 10635534
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  10635498 cctagctcaactggcaaaatgccgaaattgttaggcc 10635534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 19338297 - 19338261
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  19338297 cctagctcaactggcaaaatgccgaaattgttaggcc 19338261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 20164192 - 20164156
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  20164192 cctagctcaactggcaaaatgccgaaattgttaggcc 20164156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 24119665 - 24119701
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24119665 cctagctcaactggcaaaatgccgaaattgttaggcc 24119701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 28999383 - 28999419
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  28999383 cctagctcaactggcaaaatgccgaaattgttaggcc 28999419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 29005099 - 29005135
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  29005099 cctagctcaactggcaaaatgccgaaattgttaggcc 29005135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 40809332 - 40809296
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  40809332 cctagctcaactggcaaaatgccgaaattgttaggcc 40809296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 40958693 - 40958657
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  40958693 cctagctcaactggcaaaatgccgaaattgttaggcc 40958657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 42631104 - 42631068
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  42631104 cctagctcaactggcaaaatgccgaaattgttaggcc 42631068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 43086590 - 43086554
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  43086590 cctagctcaactggcaaaatgccgaaattgttaggcc 43086554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 43676143 - 43676107
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  43676143 cctagctcaactggcaaaatgccgaaattgttaggcc 43676107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 48314176 - 48314212
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  48314176 cctagctcaactggcaaaatgccgaaattgttaggcc 48314212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 48391965 - 48392001
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  48391965 cctagctcaactggcaaaatgccgaaattgttaggcc 48392001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 49500870 - 49500906
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  49500870 cctagctcaactggcaaaatgccgaaattgttaggcc 49500906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 3315803 - 3315839
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||||||| |||||||||||    
T  3315803 cctagctcaactggcaaaatgccgacattgttaggcc 3315839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 5790067 - 5790103
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  5790067 cctagcttaactggcaaaatgccgaaattgttaggcc 5790103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 13555843 - 13555807
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||||||||||| |||||||    
T  13555843 cctagctcaactggcaaaatgccgaaattattaggcc 13555807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 457 - 489
Target Start/End: Complemental strand, 15952949 - 15952917
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||| ||||||||||||||||||||||    
T  15952949 tagctcaactggcaaaatgccgaaattgttagg 15952917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 17068161 - 17068197
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| | ||||||||||||||||||||||    
T  17068161 cctagctcaactggtaaaatgccgaaattgttaggcc 17068197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 26261412 - 26261376
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| | ||||||||||||||||||||||    
T  26261412 cctagctcaactggaaaaatgccgaaattgttaggcc 26261376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 32880698 - 32880662
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  32880698 cctaactcaactggcaaaatgccgaaattgttaggcc 32880662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 456 - 488
Target Start/End: Complemental strand, 33845722 - 33845690
Alignment:
Q  456 ctagctcaactagcaaaatgccgaaattgttag 488  Q
    ||||||||||| |||||||||||||||||||||    
T  33845722 ctagctcaactggcaaaatgccgaaattgttag 33845690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 456 - 488
Target Start/End: Original strand, 33948256 - 33948288
Alignment:
Q  456 ctagctcaactagcaaaatgccgaaattgttag 488  Q
    ||||||||||| |||||||||||||||||||||    
T  33948256 ctagctcaactggcaaaatgccgaaattgttag 33948288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 41445149 - 41445113
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||||||| |||||||||||    
T  41445149 cctagctcaactggcaaaatgccgacattgttaggcc 41445113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 48731875 - 48731839
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||||||||||  |||||||||||||||||||||||    
T  48731875 cctagctcaactgacaaaatgccgaaattgttaggcc 48731839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 49948250 - 49948286
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||| |||||||||||||||    
T  49948250 cctagctcaactggcaaaatgtcgaaattgttaggcc 49948286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000005; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 456 - 491
Target Start/End: Complemental strand, 25586445 - 25586410
Alignment:
Q  456 ctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||||||||||||||||||||||||||||||||||    
T  25586445 ctagctcaactagcaaaatgccgaaattgttaggcc 25586410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 1033568 - 1033532
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1033568 cctagctcaactggcaaaatgccgaaattgttaggcc 1033532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 1982570 - 1982606
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1982570 cctagctcaactggcaaaatgccgaaattgttaggcc 1982606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 5397059 - 5397023
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  5397059 cctagctcaactggcaaaatgccgaaattgttaggcc 5397023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 9569484 - 9569520
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  9569484 cctagctcaactggcaaaatgccgaaattgttaggcc 9569520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 12821174 - 12821210
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  12821174 cctagctcaactggcaaaatgccgaaattgttaggcc 12821210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 23974761 - 23974725
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  23974761 cctagctcaactggcaaaatgccgaaattgttaggcc 23974725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 26440976 - 26441012
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  26440976 cctagctcaactggcaaaatgccgaaattgttaggcc 26441012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 29648773 - 29648809
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||||||||||||||||| ||||||||||    
T  29648773 cctagctcaactagcaaaatgccgaatttgttaggcc 29648809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 30044703 - 30044667
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  30044703 cctagctcaactggcaaaatgccgaaattgttaggcc 30044667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 35828283 - 35828319
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  35828283 cctagctcaactggcaaaatgccgaaattgttaggcc 35828319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 36526260 - 36526224
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||||||||||||||||| |||||||||||||||||    
T  36526260 cctagctcaactagcaaaaagccgaaattgttaggcc 36526224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 37166147 - 37166183
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  37166147 cctagctcaactggcaaaatgccgaaattgttaggcc 37166183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 42154257 - 42154221
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  42154257 cctagctcaactggcaaaatgccgaaattgttaggcc 42154221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 42856572 - 42856608
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  42856572 cctagctcaactggcaaaatgccgaaattgttaggcc 42856608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 46488236 - 46488200
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  46488236 cctagctcaactggcaaaatgccgaaattgttaggcc 46488200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 47462155 - 47462119
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  47462155 cctagctcaactggcaaaatgccgaaattgttaggcc 47462119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 49535894 - 49535930
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  49535894 cctagctcaactggcaaaatgccgaaattgttaggcc 49535930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 49882828 - 49882792
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  49882828 cctagctcaactggcaaaatgccgaaattgttaggcc 49882792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 51425339 - 51425375
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||| |||||||||||||||||||||||||||||||    
T  51425339 cctagttcaactagcaaaatgccgaaattgttaggcc 51425375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 54908011 - 54907975
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  54908011 cctagctcaactggcaaaatgccgaaattgttaggcc 54907975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 491
Target Start/End: Original strand, 18371356 - 18371391
Alignment:
Q  456 ctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||||||||| ||||||||||||||||||||||||    
T  18371356 ctagctcaactggcaaaatgccgaaattgttaggcc 18371391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 491
Target Start/End: Original strand, 34684212 - 34684247
Alignment:
Q  456 ctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||||||||| ||||||||||||||||||||||||    
T  34684212 ctagctcaactggcaaaatgccgaaattgttaggcc 34684247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 455 - 489
Target Start/End: Complemental strand, 3084361 - 3084327
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||||| ||||||||||||||||||||||    
T  3084361 cctagctcaactggcaaaatgccgaaattgttagg 3084327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 456 - 486
Target Start/End: Complemental strand, 9038324 - 9038294
Alignment:
Q  456 ctagctcaactagcaaaatgccgaaattgtt 486  Q
    |||||||||||||||||||||||||||||||    
T  9038324 ctagctcaactagcaaaatgccgaaattgtt 9038294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 457 - 491
Target Start/End: Original strand, 24550824 - 24550858
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||| ||||||||||||||||||||||||    
T  24550824 tagctcaactggcaaaatgccgaaattgttaggcc 24550858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 455 - 489
Target Start/End: Original strand, 24712097 - 24712131
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||||| ||||||||||||||||||||||    
T  24712097 cctagctcaactggcaaaatgccgaaattgttagg 24712131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 457 - 491
Target Start/End: Original strand, 37050712 - 37050746
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||| ||||||||||||||||||||||||    
T  37050712 tagctcaactggcaaaatgccgaaattgttaggcc 37050746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 457 - 491
Target Start/End: Complemental strand, 42412105 - 42412071
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||| ||||||||||||||||||||||||    
T  42412105 tagctcaactggcaaaatgccgaaattgttaggcc 42412071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 457 - 491
Target Start/End: Original strand, 51281477 - 51281511
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||| ||||||||||||||||||||||||    
T  51281477 tagctcaactggcaaaatgccgaaattgttaggcc 51281511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 3848937 - 3848901
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  3848937 cctagctcaactggcaaaatgccgaaattgctaggcc 3848901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 7512776 - 7512812
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||||| |||||||||||||    
T  7512776 cctagctcaactggcaaaatgccaaaattgttaggcc 7512812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 18813379 - 18813415
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  18813379 cctaactcaactggcaaaatgccgaaattgttaggcc 18813415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 28033201 - 28033237
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| | ||||||||||||||||||||||    
T  28033201 cctagctcaactggtaaaatgccgaaattgttaggcc 28033237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 29428064 - 29428100
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  29428064 cctagctcaactggcaaaataccgaaattgttaggcc 29428100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 32662721 - 32662685
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||||||||||||||||||||  |||||||||||||    
T  32662721 cctagctcaactagcaaaatgctaaaattgttaggcc 32662685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 35318549 - 35318585
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  35318549 cctaactcaactggcaaaatgccgaaattgttaggcc 35318585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 49319740 - 49319776
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  49319740 cctagctcaactaacaaaatgtcgaaattgttaggcc 49319776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 51564510 - 51564474
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||||||||| |||||||||    
T  51564510 cctagctcaactggcaaaatgccgaaactgttaggcc 51564474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 52556502 - 52556466
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||||| |||||||||||||    
T  52556502 cctagctcaactggcaaaatgccaaaattgttaggcc 52556466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 65250 - 65287
Alignment:
Q  15 ggtgacctcctgaaaaatctttgtgttgcacctctttt 52  Q
    |||||||||||||||| |||||||||||||||||||||    
T  65250 ggtgacctcctgaaaagtctttgtgttgcacctctttt 65287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 6788 - 6824
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  6788 cctagctcaactggcaaaatgccgaaattgttaggcc 6824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 9376 - 9412
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  9376 cctagctcaactggcaaaatgccgaaattgttaggcc 9412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 1360 - 1324
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1360 cctagctcaactggcaaaatgccgaaattgttaggcc 1324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 1177 - 1141
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1177 cctagctcaactggcaaaatgccgaaattgttaggcc 1141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 90578 - 90614
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  90578 cctagctcaactggcaaaatgccgaaattgttaggcc 90614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000003; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 2354916 - 2354880
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  2354916 cctagctcaactggcaaaatgccgaaattgttaggcc 2354880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 3497636 - 3497600
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  3497636 cctagctcaactggcaaaatgccgaaattgttaggcc 3497600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 4887632 - 4887596
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  4887632 cctagctcaactggcaaaatgccgaaattgttaggcc 4887596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 10061135 - 10061099
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  10061135 cctagctcaactggcaaaatgccgaaattgttaggcc 10061099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 10704010 - 10703974
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  10704010 cctagctcaactggcaaaatgccgaaattgttaggcc 10703974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 27396433 - 27396397
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  27396433 cctagctcaactggcaaaatgccgaaattgttaggcc 27396397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 33512806 - 33512842
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  33512806 cctagctcaactggcaaaatgccgaaattgttaggcc 33512842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 35157203 - 35157167
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  35157203 cctagctcaactggcaaaatgccgaaattgttaggcc 35157167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 45236939 - 45236975
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  45236939 cctagctcaactggcaaaatgccgaaattgttaggcc 45236975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 48612526 - 48612562
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  48612526 cctagctcaactggcaaaatgccgaaattgttaggcc 48612562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 48729803 - 48729767
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  48729803 cctagctcaactggcaaaatgccgaaattgttaggcc 48729767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 457 - 491
Target Start/End: Original strand, 5508696 - 5508730
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||| ||||||||||||||||||||||||    
T  5508696 tagctcaactggcaaaatgccgaaattgttaggcc 5508730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 453 - 491
Target Start/End: Original strand, 16816698 - 16816736
Alignment:
Q  453 aacctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||||| |||||| ||||||||||||||||||||||||    
T  16816698 aacctagttcaactggcaaaatgccgaaattgttaggcc 16816736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 457 - 491
Target Start/End: Complemental strand, 37410819 - 37410785
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||| ||||||||||||||||||||||||    
T  37410819 tagctcaactggcaaaatgccgaaattgttaggcc 37410785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 489
Target Start/End: Complemental strand, 19563213 - 19563180
Alignment:
Q  456 ctagctcaactagcaaaatgccgaaattgttagg 489  Q
    ||||||||||||| ||||||||||||||||||||    
T  19563213 ctagctcaactagtaaaatgccgaaattgttagg 19563180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 1323692 - 1323728
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  1323692 cctagctcaactggcaaaatgccgaatttgttaggcc 1323728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 1573960 - 1573924
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| | ||||||||||||||||||||||    
T  1573960 cctagctcaactggtaaaatgccgaaattgttaggcc 1573924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 4106563 - 4106599
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| | ||||||||||||||||||||||    
T  4106563 cctagctcaactggtaaaatgccgaaattgttaggcc 4106599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 487
Target Start/End: Complemental strand, 4674428 - 4674396
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgtta 487  Q
    |||||||||||| ||||||||||||||||||||    
T  4674428 cctagctcaactggcaaaatgccgaaattgtta 4674396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 6596551 - 6596587
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||||| |||||||||||||    
T  6596551 cctagctcaactggcaaaatgccaaaattgttaggcc 6596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 7312572 - 7312536
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||||| |||||||||||||    
T  7312572 cctagctcaactggcaaaatgccaaaattgttaggcc 7312536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 9380000 - 9380036
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||| |||||||||||||||    
T  9380000 cctagctcaactggcaaaatgtcgaaattgttaggcc 9380036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 17895643 - 17895679
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  17895643 cctagctcaactggcaaaatgctgaaattgttaggcc 17895679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 18944933 - 18944969
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  18944933 cctagttcaactggcaaaatgccgaaattgttaggcc 18944969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 459 - 491
Target Start/End: Original strand, 19258437 - 19258469
Alignment:
Q  459 gctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||| ||||||||||||||||||||||    
T  19258437 gctcaactagaaaaatgccgaaattgttaggcc 19258469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 19306721 - 19306757
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||||||||||| |||||||    
T  19306721 cctagctcaactggcaaaatgccgaaattattaggcc 19306757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 21226074 - 21226110
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  21226074 cctatctcaactggcaaaatgccgaaattgttaggcc 21226110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 29151592 - 29151628
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  29151592 cctagctcaactggcaaaatgctgaaattgttaggcc 29151628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 31717306 - 31717342
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| | ||||||||||||||||||||||    
T  31717306 cctagctcaactggtaaaatgccgaaattgttaggcc 31717342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 35849304 - 35849340
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  35849304 cctagctcaactggcaaagtgccgaaattgttaggcc 35849340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 487
Target Start/End: Complemental strand, 36280044 - 36280012
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgtta 487  Q
    |||||||||||| ||||||||||||||||||||    
T  36280044 cctagctcaactggcaaaatgccgaaattgtta 36280012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 40809054 - 40809090
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  40809054 cctagctcaactggcaaaatgccgaatttgttaggcc 40809090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 42557621 - 42557585
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||| | ||||||||||||||||||||||||    
T  42557621 cctagctcaattggcaaaatgccgaaattgttaggcc 42557585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 457 - 489
Target Start/End: Complemental strand, 45041850 - 45041818
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||| ||||||||||||||||||||||    
T  45041850 tagctcaactggcaaaatgccgaaattgttagg 45041818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000003; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 1241604 - 1241640
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1241604 cctagctcaactggcaaaatgccgaaattgttaggcc 1241640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 2314718 - 2314682
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  2314718 cctagctcaactggcaaaatgccgaaattgttaggcc 2314682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 8448261 - 8448225
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  8448261 cctagctcaactggcaaaatgccgaaattgttaggcc 8448225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 8457065 - 8457029
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  8457065 cctagctcaactggcaaaatgccgaaattgttaggcc 8457029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 12795138 - 12795102
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||||| ||||||||||||||||||||||    
T  12795138 cctagctcaactagtaaaatgccgaaattgttaggcc 12795102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 17534642 - 17534606
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  17534642 cctagctcaactggcaaaatgccgaaattgttaggcc 17534606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 18861886 - 18861850
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  18861886 cctagctcaactggcaaaatgccgaaattgttaggcc 18861850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 31205302 - 31205266
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||||||||||||||||||||||    
T  31205302 cctagctcaactggcaaaatgccgaaattgttaggcc 31205266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 491
Target Start/End: Original strand, 735455 - 735490
Alignment:
Q  456 ctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    ||||||||||| ||||||||||||||||||||||||    
T  735455 ctagctcaactggcaaaatgccgaaattgttaggcc 735490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 490
Target Start/End: Complemental strand, 32107954 - 32107919
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggc 490  Q
    |||||||||||| |||||||||||||||||||||||    
T  32107954 cctagctcaactggcaaaatgccgaaattgttaggc 32107919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 455 - 489
Target Start/End: Original strand, 4083596 - 4083630
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||||| ||||||||||||||||||||||    
T  4083596 cctagctcaactggcaaaatgccgaaattgttagg 4083630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 455 - 489
Target Start/End: Original strand, 8939635 - 8939669
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||||| ||||||||||||||||||||||    
T  8939635 cctagctcaactggcaaaatgccgaaattgttagg 8939669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 455 - 489
Target Start/End: Original strand, 10181054 - 10181088
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttagg 489  Q
    |||||||||||| ||||||||||||||||||||||    
T  10181054 cctagctcaactggcaaaatgccgaaattgttagg 10181088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 4480483 - 4480519
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  4480483 cctaactcaactggcaaaatgccgaaattgttaggcc 4480519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 7098972 - 7099008
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| | ||||||||||||||||||||||    
T  7098972 cctagctcaactggaaaaatgccgaaattgttaggcc 7099008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 8329677 - 8329641
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||| |||||||||||||||||||    
T  8329677 cctagctcaactggcaatatgccgaaattgttaggcc 8329641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 10263190 - 10263154
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  10263190 cctagctcaactggcaaagtgccgaaattgttaggcc 10263154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 13540280 - 13540244
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||| | ||||||||||||||||||||||||    
T  13540280 cctagctcaaatggcaaaatgccgaaattgttaggcc 13540244  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 21513081 - 21513117
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||| |||||||||||||||    
T  21513081 cctagctcaactggcaaaatgtcgaaattgttaggcc 21513117  T

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Target: scaffold0882 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0882
Description:

Target: scaffold0882; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 457 - 491
Target Start/End: Complemental strand, 3814 - 3780
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||| ||||||||||||||||||||||||    
T  3814 tagctcaactggcaaaatgccgaaattgttaggcc 3780  T

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Target: scaffold0061 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 457 - 491
Target Start/End: Complemental strand, 8976 - 8942
Alignment:
Q  457 tagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||| ||||||||||||||||||||||||    
T  8976 tagctcaactggcaaaatgccgaaattgttaggcc 8942  T

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Target: scaffold0778 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 827 - 863
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||||||| |||||||||||||||    
T  827 cctagctcaactggcaaaatgtcgaaattgttaggcc 863  T

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Target: scaffold0595 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 354 - 390
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| |||| |||||||||||||||||||    
T  354 cctagctcaactggcaatatgccgaaattgttaggcc 390  T

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Target: scaffold0179 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 487
Target Start/End: Complemental strand, 4134 - 4102
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgtta 487  Q
    |||||||||||| ||||||||||||||||||||    
T  4134 cctagctcaactggcaaaatgccgaaattgtta 4102  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 39432 - 39396
Alignment:
Q  455 cctagctcaactagcaaaatgccgaaattgttaggcc 491  Q
    |||||||||||| | ||||||||||||||||||||||    
T  39432 cctagctcaactggtaaaatgccgaaattgttaggcc 39396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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