View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6190_high_2 (Length: 280)
Name: NF6190_high_2
Description: NF6190
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6190_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 18 - 262
Target Start/End: Complemental strand, 38969673 - 38969429
Alignment:
| Q |
18 |
cagagacagctggtttattttgtgttccataaagcaatcaacattcaacaggcttctatctttaaggagacaactagtacttaactgctgttaattaatg |
117 |
Q |
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| T |
38969673 |
cagagacagctggtttattttgtgttccataaagcaatcaacattcaacaggcttctatctttaaggagacaactagtacttaactgctgttaattaatg |
38969574 |
T |
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| Q |
118 |
aaatcttcaagttcatgcaactcttttcctttcaccactgacttcaacctggctgtaaaaataacttctaaaatttggtccattggtttctcttttgttt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38969573 |
aaatcttcaagttcatgcaactcttttcctttcaccactgacttcaacctggctgtaaaaataacttctaaaatttggtccattggtttctcttttgttt |
38969474 |
T |
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| Q |
218 |
tttgtcatttgttaaataaattttcaaaataaggaacttagatgt |
262 |
Q |
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| T |
38969473 |
tttgtgatttgttaagtaaattttcaaaataaggaacttagatgt |
38969429 |
T |
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