View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6191_high_11 (Length: 408)
Name: NF6191_high_11
Description: NF6191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6191_high_11 |
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Alignment Details
Target: chr1 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 83 - 392
Target Start/End: Complemental strand, 48756119 - 48755810
Alignment:
| Q |
83 |
tttcagttcagtttgaaaattaagaaccagttcaccgaactataacaccagtcctattcaattcggaccaaactattaacaaatcggttcggttcagttg |
182 |
Q |
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| T |
48756119 |
tttcagttcagtttgaaaattaagaaccagttcaccgaactataacaccagtccgattcaattcggaccaaactattaacaaattggtttggttcagttg |
48756020 |
T |
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| Q |
183 |
tctgtatgaaccaaaccatgaacggtccgagttcttatcacttctcttgtggttatagtcattgggatgcataaatgttactaaggcttatatatggttt |
282 |
Q |
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| T |
48756019 |
tctgtatgaaccaaaccatgaacggtccgagttcttatcacttctcttgtggttatagtcattgggatgcataaatgttactaaggcttatatatggttt |
48755920 |
T |
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| Q |
283 |
attaatggatataatgcatattattagagtgaccttcattctaaataagtgtattataaagatttacagatatattaagcaatggcttagttggagaaag |
382 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
48755919 |
attaatggatataatgcatattattagagtgaccttcattctaaataagtgtattataaagatttatagatatattaagcaatggcttagttggagaaag |
48755820 |
T |
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| Q |
383 |
cccaataatt |
392 |
Q |
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|||||||||| |
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| T |
48755819 |
cccaataatt |
48755810 |
T |
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