View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6191_high_17 (Length: 329)
Name: NF6191_high_17
Description: NF6191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6191_high_17 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 41 - 310
Target Start/End: Original strand, 2623877 - 2624146
Alignment:
| Q |
41 |
gtccaaggtaatgatccgcaggctcccttgaaaatttcaaacagtttctaaccattaaattggtctttattttggaaactttgtttatattattttannn |
140 |
Q |
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| T |
2623877 |
gtccaaggtaataatcggcaggctcccttgaaaatttcaaacagtttctaaccattaaattggtctttattttggaaactttgtttatattattttattt |
2623976 |
T |
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| Q |
141 |
nnnncttgtttctaacatgcagagtgttaaactagagttgagtgcagacaac-gtgttggtttcctctctgacatatcacgagtcctcagagaaaatagt |
239 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2623977 |
ttt-cttgtttctaacatgcagagtgttaaactagagttgagtgcagacaacagtgttggtttcctctctgacatatcacgagtcctcagagaaaatagt |
2624075 |
T |
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| Q |
240 |
cttgttattgtacgagcattcataaacttgttctctagtttagtcttttggagaaatttcattctcatggt |
310 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2624076 |
cttgttattgtacgagcattcataaacttgttctctagtttagtcttttggagaaatttcattctcatggt |
2624146 |
T |
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