View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6191_low_17 (Length: 354)
Name: NF6191_low_17
Description: NF6191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6191_low_17 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 14 - 354
Target Start/End: Original strand, 28594494 - 28594834
Alignment:
| Q |
14 |
atatatatagagagagaaagaggtgtacgtgttgtgtgtataagtgtatagcttagggacaaagtacttatcattgttaagaaggaaaagagaagaaatc |
113 |
Q |
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| T |
28594494 |
atatatatatcgagagaaagaggtgtacgtgttgtgtgtataaatgtatagcttagggacaaagtacttattattgttaagaaggaaaagagaagaaatc |
28594593 |
T |
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| Q |
114 |
tagttggcagttagtattaccacaaataggtaatgcaatagctttgggctcacgttagtgtacctgacacgttgtgttcacccacgtagacattaggctc |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28594594 |
tagttggcagttagtattaccacaaataggtaatgcaatagctttgggctcacgttagtgtacctgacacgttgtgttcacccacgtagacattaggctc |
28594693 |
T |
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| Q |
214 |
agcatatccatccattcattcccaatcaattagtattaactattaactagataaattaacacttgtttggtataacaaattagttgattaattagcttct |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28594694 |
agcatatccatccattcattcccaatcaattagtattaactattaactagataaattaacacttgtttggtataacaaattagttgattaattagcttct |
28594793 |
T |
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| Q |
314 |
tattcgattcgttcggtgtcaattttgttgtgttaatccat |
354 |
Q |
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|||||||||||||||||||||||||||||| ||||||||| |
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| T |
28594794 |
tattcgattcgttcggtgtcaattttgttggattaatccat |
28594834 |
T |
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