View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6191_low_18 (Length: 342)
Name: NF6191_low_18
Description: NF6191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6191_low_18 |
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Alignment Details
Target: chr3 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 11 - 324
Target Start/End: Original strand, 49157856 - 49158170
Alignment:
| Q |
11 |
tttgttatatgagaattgtcccacttataaacttacaccatttctcatacaaactaatatatacaaataaa-gaccggtatgtcaatagttcttctttgt |
109 |
Q |
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| T |
49157856 |
tttgttacatgagaattgtcccacttataaacttagaccatgtctcaagcaaactaatatatacaaataaatgaccggtatgtcaatagttcttctttgt |
49157955 |
T |
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| Q |
110 |
cctggttaataattacaacaccccgttcctgtttcatcaataaaacagtgaatattacaggtgagaatctttgatacaattacaaaccctcccattgcat |
209 |
Q |
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| T |
49157956 |
cctggttaataattacaacaccccgttcctgtttcatcaataaaacagtgaatattacaggtgagaatctttgatacaattacaaaccctcccattgcat |
49158055 |
T |
|
| Q |
210 |
gaaatgcaatatttatgatctccttattgttgttgcaaagaaagcatgcttcgtatatataagtgtttaacgttcatcgtatttgattcaacaaacaatg |
309 |
Q |
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| T |
49158056 |
gaaatgcaatatttatgatctccttattgttgttgcaaagaaagcatgcttcgtatatataagtgtttaacgttcatcgtatttgattcaacaaacaatg |
49158155 |
T |
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| Q |
310 |
cacaagcacgaccac |
324 |
Q |
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| T |
49158156 |
cacaagcacgaccac |
49158170 |
T |
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