View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6191_low_5 (Length: 510)
Name: NF6191_low_5
Description: NF6191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6191_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 454; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 454; E-Value: 0
Query Start/End: Original strand, 10 - 496
Target Start/End: Original strand, 36695083 - 36695569
Alignment:
| Q |
10 |
aagaaaatgttaaccaacacagaaattaatccaccaactagaattgttgttaccctatcttgtgcagtatcaattatctcatggtctctataacttgata |
109 |
Q |
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| T |
36695083 |
aagaaaatgttaaccaacacagaaattaatccaccaactagaattgttgttaccctatcttgtgcagtatcaattatctcatggtctctataacttgata |
36695182 |
T |
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| Q |
110 |
cagataccaaacaaaatgtcaagataaacactagcaaaccataatcatatcttgccttcattagaggtataaatcgaatatatgtagcccctgcagctga |
209 |
Q |
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| T |
36695183 |
cagataccaaacaaaatgtcaagataaacactagcaaaccataatcatatcttgccttcattagaggtataaatcgaatatatgtagcccctgcagctga |
36695282 |
T |
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| Q |
210 |
aatgattnnnnnnncatgcattggttagtattgtttttgatagttcttactggtgaaattatgaaatatacaatcagagaagtaaatattacttgctaga |
309 |
Q |
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| T |
36695283 |
aatgattaaaaaaaaatgcgttggttagtattgtttttgatagttcttactggtgaaattatgaaatatacaattagagaagtaaatattacttgctaga |
36695382 |
T |
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| Q |
310 |
aatattatgattccaagaagtataggttcaattgttgtatttcctcttgaaattgaatgaaccatgtaataagatccaagtccaagaacacctgccaaaa |
409 |
Q |
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| T |
36695383 |
aatattatgattccaagaagtataggttcaattgttgtatttcctcttgaaattgaatgaaccatgtaataagatccaagtccaagaacacctgccaaaa |
36695482 |
T |
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| Q |
410 |
atgttgctaaacctctatttaaaccttttccaagtgttgctcctgcatatgccacataatcaaattaattaaccaccagttaaaatt |
496 |
Q |
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| T |
36695483 |
atgttgctaaacctctatttaaaccttttccaagtgttgctcctgcatatgccacataatcaaattaattaaccaccagttaaaatt |
36695569 |
T |
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