View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6192_high_18 (Length: 234)
Name: NF6192_high_18
Description: NF6192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6192_high_18 |
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Alignment Details
Target: chr5 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 17 - 169
Target Start/End: Complemental strand, 36656774 - 36656622
Alignment:
| Q |
17 |
atcttgaatattgtagaatgcgataataagaataatgcagcgattaaggaatttgagatcaagctcaaattcattttcagtcgcaaacgttaaacgcaaa |
116 |
Q |
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| T |
36656774 |
atcttgaatattgtagaatgcgataataagaataatgcagcgattaaggaatttgagatcaagctcaaattcattttcagtcgcaaacgttaaacgcaaa |
36656675 |
T |
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| Q |
117 |
tatctgaattcatgtgctgctattcaagatacttttcattccaccaaggtccg |
169 |
Q |
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| T |
36656674 |
tatctcaattcatgtgctgctattcaagatacttttcattccaccaaggtccg |
36656622 |
T |
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