View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6192_high_8 (Length: 364)

Name: NF6192_high_8
Description: NF6192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6192_high_8
NF6192_high_8
[»] chr8 (8 HSPs)
chr8 (150-355)||(29960910-29961112)
chr8 (17-144)||(4834952-4835079)
chr8 (50-112)||(41474293-41474355)
chr8 (35-93)||(20896187-20896245)
chr8 (62-142)||(16467583-16467663)
chr8 (32-118)||(35793177-35793263)
chr8 (35-89)||(44077744-44077798)
chr8 (36-93)||(44132874-44132931)
[»] chr4 (16 HSPs)
chr4 (19-142)||(52673182-52673305)
chr4 (24-144)||(53406478-53406597)
chr4 (33-138)||(29693184-29693287)
chr4 (19-142)||(29544146-29544269)
chr4 (19-151)||(46079324-46079456)
chr4 (37-97)||(29724351-29724411)
chr4 (47-87)||(40202260-40202300)
chr4 (36-93)||(53176872-53176929)
chr4 (45-93)||(30643602-30643650)
chr4 (36-96)||(44015413-44015473)
chr4 (47-86)||(1208706-1208745)
chr4 (36-87)||(19473052-19473103)
chr4 (38-93)||(31455897-31455952)
chr4 (36-97)||(52198377-52198438)
chr4 (37-93)||(50041816-50041872)
chr4 (37-93)||(50049038-50049094)
[»] chr2 (13 HSPs)
chr2 (25-142)||(39728970-39729087)
chr2 (19-140)||(6752058-6752179)
chr2 (32-144)||(23395915-23396027)
chr2 (19-134)||(41069657-41069772)
chr2 (32-140)||(11226132-11226240)
chr2 (19-142)||(31750448-31750569)
chr2 (32-93)||(32832590-32832651)
chr2 (62-125)||(3496805-3496868)
chr2 (62-125)||(15141881-15141944)
chr2 (47-93)||(36562752-36562798)
chr2 (36-93)||(13477690-13477747)
chr2 (62-119)||(19037073-19037130)
chr2 (36-85)||(40204728-40204777)
[»] chr3 (11 HSPs)
chr3 (19-142)||(10688592-10688715)
chr3 (19-93)||(46348376-46348450)
chr3 (32-94)||(47548868-47548930)
chr3 (62-151)||(49279464-49279553)
chr3 (19-142)||(50700003-50700119)
chr3 (32-93)||(39485467-39485528)
chr3 (49-93)||(39488495-39488539)
chr3 (62-125)||(4037142-4037205)
chr3 (62-125)||(11233507-11233570)
chr3 (52-86)||(42466974-42467008)
chr3 (36-85)||(16278813-16278862)
[»] chr1 (17 HSPs)
chr1 (19-135)||(48914969-48915085)
chr1 (19-144)||(48915161-48915284)
chr1 (19-126)||(48915360-48915467)
chr1 (19-142)||(50539712-50539835)
chr1 (33-142)||(19456308-19456417)
chr1 (33-142)||(24671140-24671249)
chr1 (36-142)||(26478546-26478652)
chr1 (48-93)||(20717120-20717165)
chr1 (62-151)||(27032326-27032415)
chr1 (37-97)||(49177424-49177483)
chr1 (47-93)||(5398034-5398080)
chr1 (62-144)||(27907685-27907767)
chr1 (32-93)||(49177278-49177337)
chr1 (36-93)||(19431391-19431448)
chr1 (32-93)||(17923859-17923920)
chr1 (46-95)||(25586867-25586916)
chr1 (35-83)||(3950295-3950343)
[»] chr7 (14 HSPs)
chr7 (19-135)||(2628420-2628536)
chr7 (18-142)||(9488752-9488877)
chr7 (32-93)||(32279291-32279352)
chr7 (52-93)||(33747989-33748030)
chr7 (32-93)||(37685187-37685248)
chr7 (62-125)||(16876743-16876806)
chr7 (62-125)||(18867954-18868017)
chr7 (62-125)||(23185929-23185992)
chr7 (62-125)||(46425344-46425407)
chr7 (33-86)||(11369053-11369106)
chr7 (56-97)||(15667897-15667938)
chr7 (36-97)||(32204771-32204832)
chr7 (62-142)||(34328091-34328169)
chr7 (46-87)||(43368497-43368538)
[»] chr5 (12 HSPs)
chr5 (19-107)||(27554907-27554995)
chr5 (56-130)||(2651618-2651692)
chr5 (19-112)||(34928806-34928901)
chr5 (32-136)||(22658818-22658921)
chr5 (19-86)||(14151926-14151993)
chr5 (32-97)||(18267851-18267916)
chr5 (36-93)||(33953161-33953218)
chr5 (46-93)||(18623597-18623644)
chr5 (62-125)||(37515589-37515652)
chr5 (35-93)||(22653513-22653571)
chr5 (36-93)||(19824617-19824674)
chr5 (36-87)||(14281810-14281862)
[»] chr6 (8 HSPs)
chr6 (36-98)||(26847168-26847230)
chr6 (36-92)||(457683-457739)
chr6 (62-143)||(31743843-31743922)
chr6 (62-125)||(9928262-9928325)
chr6 (36-83)||(24226101-24226148)
chr6 (56-125)||(9549369-9549436)
chr6 (62-119)||(7506639-7506696)
chr6 (62-151)||(22469674-22469763)
[»] scaffold0289 (1 HSPs)
scaffold0289 (56-97)||(20314-20355)


Alignment Details
Target: chr8 (Bit Score: 142; Significance: 2e-74; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 150 - 355
Target Start/End: Complemental strand, 29961112 - 29960910
Alignment:
Q  150 aactctaatgagacacttaattcccc-aagactagttgttagaaactgcttttgccacctaatcttgcaatccctcaaaacatgcaacaaagtttcaaaa 248  Q
    ||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29961112 aactccaatgagacacttacttcccccaagactagttgttagaaactgcttttgccacctaatcttgcaatccctcaaaacatgcaacaaagtttcaaaa 29961013  T
Q  249 tcggcacaataaagtgggacatcgattgggctcagtcattcttgcatgcattatatcatnnnnnnnntctatacaaatttaatcaataaattcatttgaa 348  Q
    ||||||||||||||||||||||||| ||||||||||||||||    | |||||||||||        |||||||||||||||||||||||||||||||||    
T  29961012 tcggcacaataaagtgggacatcgactgggctcagtcattct----tacattatatcataaaaaaaatctatacaaatttaatcaataaattcatttgaa 29960917  T
Q  349 gtattat 355  Q
    |||||||    
T  29960916 gtattat 29960910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 4834952 - 4835079
Alignment:
Q  17 atattgatgatatatgttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggat 116  Q
    |||||| ||| ||| ||||||||||||| ||||| |||||||||||||| ||||||||||||||||||| | | ||| |||  |||| |||||||  |||    
T  4834952 atattggtgacataggttcattttagatgagagagaatgatgaatgaatgattaaaataaattatttaggtgaaagagaatgagttgttaagagaaagat 4835051  T
Q  117 aaacacaaaagtatcaatgacaccaatg 144  Q
    | ||||||||||||||||| ||||||||    
T  4835052 agacacaaaagtatcaatggcaccaatg 4835079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 41474293 - 41474355
Alignment:
Q  50 aaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagag 112  Q
    ||||| |||||||||| |||||||||||||||||| ||||||||||||| |||| ||||||||    
T  41474293 aaaataatgaatgaatgattaaaataaattatttaaataagagataataagttgttaagagag 41474355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 20896187 - 20896245
Alignment:
Q  35 cattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    |||||||||| ||||| ||||||  |||||| ||||||||||||||||||||| |||||    
T  20896187 cattttagatgagagataatgatatatgaatgattaaaataaattatttagatgagaga 20896245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 16467663 - 16467583
Alignment:
Q  62 gaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaaagtatcaatgacaccaa 142  Q
    |||| |||||| |||||||||||||| ||||| ||||  ||  |||||||| ||||||||||||  |||| ||||||||||    
T  16467663 gaatgattaaactaaattatttagatgagagagaataaattattaagagagagataaacacaaagttatctatgacaccaa 16467583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 35793263 - 35793177
Alignment:
Q  32 gttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataa 118  Q
    |||||||| |||| || || |||||  ||||||| |||||||||||||||||| || |||||||||  || | |||||||| |||||    
T  35793263 gttcatttgagatgagtgacaatgaaaaatgaataattaaaataaattatttaaatgagagataatgagtagttaagagagagataa 35793177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 44077744 - 44077798
Alignment:
Q  35 cattttagattagagaaaatgatgaatgaattattaaaataaattatttagataa 89  Q
    |||||||||| | ||| | |||||||| ||| |||||||||||||||||||||||    
T  44077744 cattttagatgaaagagagtgatgaataaataattaaaataaattatttagataa 44077798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 44132874 - 44132931
Alignment:
Q  36 attttagattagagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    ||||||||| ||||| ||||||  |||||| ||||||||||||||||| ||| |||||    
T  44132874 attttagatgagagataatgatagatgaatgattaaaataaattattttgatgagaga 44132931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 4e-35; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 52673182 - 52673305
Alignment:
Q  19 attgatgatatatgttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataa 118  Q
    |||| ||| ||| ||||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||| ||||| |||||||||||||||||| ||||     
T  52673182 attggtgacataggttcattttagatgagagagaatgatgaatgaataattaaaataaattattttgatgagagagaatatgttggtaagagagagatag 52673281  T
Q  119 acacaaaagtatcaatgacaccaa 142  Q
    |||||||| |||||||||||||||    
T  52673282 acacaaaaatatcaatgacaccaa 52673305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 53406478 - 53406597
Alignment:
Q  24 tgatatatgttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacaca 123  Q
    ||||| ||||||||||||||| | |||||||||||||| ||| ||||||||||||||||||||||||||| |||   ||| |||||||| |||| ||||     
T  53406478 tgatacatgttcattttagatgaaagaaaatgatgaataaataattaaaataaattatttagataagagaaaatgaattgttaagagagagatagacac- 53406576  T
Q  124 aaagtatcaatgacaccaatg 144  Q
    || ||||||||||||||||||    
T  53406577 aaggtatcaatgacaccaatg 53406597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 33 - 138
Target Start/End: Complemental strand, 29693287 - 29693184
Alignment:
Q  33 ttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaaagtatca 132  Q
    |||||||||||| ||||| |||||| ||| ||| |||||||||||||||||| |||||||||||||||||| |||||||  |||| ||||||||||| ||    
T  29693287 ttcattttagatgagagagaatgataaataaataattaaaataaattatttaaataagagataatatgttgttaagaga--gatagacacaaaagtacca 29693190  T
Q  133 atgaca 138  Q
    ||||||    
T  29693189 atgaca 29693184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 29544146 - 29544269
Alignment:
Q  19 attgatgatatatgttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataa 118  Q
    |||| ||| ||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| | ||| |||  |||| ||| |||| ||||     
T  29544146 attggtgacatatgttcattttagatgagagaaaatgataaatgaatgattaaaataaattatttagatgatagagaatgagttgttaatagagagatag 29544245  T
Q  119 acacaaaagtatcaatgacaccaa 142  Q
    ||||||| || |||||| ||||||    
T  29544246 acacaaaggtgtcaatggcaccaa 29544269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 46079324 - 46079456
Alignment:
Q  19 attgatgatatatgttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataa 118  Q
    |||||||| ||| ||||||||||||| ||||| |||||| ||||||| ||||||||||||||||||||| ||||| |||  |||| |||||||  ||||     
T  46079324 attgatgacataggttcattttagatgagagagaatgatcaatgaatgattaaaataaattatttagatgagagagaatgagttgttaagagacagatag 46079423  T
Q  119 acacaaaagtatcaatgacaccaatgataccaa 151  Q
    ||||||| ||   |||| ||||||||| |||||    
T  46079424 acacaaatgtgctaatggcaccaatgacaccaa 46079456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 29724351 - 29724411
Alignment:
Q  37 ttttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataat 97  Q
    |||||||| | ||| ||| || ||||||| |||||||||||||||||||||||||||||||    
T  29724351 ttttagatgatagagaataataaatgaatgattaaaataaattatttagataagagataat 29724411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 40202260 - 40202300
Alignment:
Q  47 gagaaaatgatgaatgaattattaaaataaattatttagat 87  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  40202260 gagataatgatgaatgaattattaaaataaattatttagat 40202300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 53176929 - 53176872
Alignment:
Q  36 attttagattagagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    ||||||||| | |||| || |||||||||| ||||||||||||||||||||| |||||    
T  53176929 attttagatgacagaagataatgaatgaatgattaaaataaattatttagatgagaga 53176872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 30643602 - 30643650
Alignment:
Q  45 tagagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    |||||| ||||||| |||||| ||||||||||||||||||||| |||||    
T  30643602 tagagataatgatggatgaatgattaaaataaattatttagatgagaga 30643650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 44015413 - 44015473
Alignment:
Q  36 attttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataa 96  Q
    ||||||||| ||| | ||||||  |||||| ||||||||||||||||||||| ||||||||    
T  44015413 attttagatgagaaagaatgatagatgaatgattaaaataaattatttagatgagagataa 44015473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 1208706 - 1208745
Alignment:
Q  47 gagaaaatgatgaatgaattattaaaataaattatttaga 86  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  1208706 gagagaatgatgaatgaatgattaaaataaattatttaga 1208745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 19473052 - 19473103
Alignment:
Q  36 attttagattagagaaaatgatgaatgaattattaaaataaattatttagat 87  Q
    ||||||||  ||||||||||||  |||||| |||||||||||||||||||||    
T  19473052 attttagaggagagaaaatgatacatgaatgattaaaataaattatttagat 19473103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 31455897 - 31455952
Alignment:
Q  38 tttagattagagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    ||||||| | ||| ||||| |||||||| ||||||||||||||||||||| |||||    
T  31455897 tttagatgaaagagaatgaagaatgaatgattaaaataaattatttagatgagaga 31455952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 52198438 - 52198377
Alignment:
Q  36 attttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataat 97  Q
    ||||||||| ||||| ||||||  || ||| ||||||||||||||||| ||| |||||||||    
T  52198438 attttagatgagagataatgatagataaatgattaaaataaattattttgatgagagataat 52198377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 50041816 - 50041872
Alignment:
Q  37 ttttagattagagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    |||||||| ||||| ||||||  |||||| ||||||||||||||||| ||| |||||    
T  50041816 ttttagatgagagataatgatagatgaatgattaaaataaattattttgatgagaga 50041872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 50049038 - 50049094
Alignment:
Q  37 ttttagattagagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    |||||||| ||||| ||||||  |||||| ||||||||||||||||| ||| |||||    
T  50049038 ttttagatgagagataatgatagatgaatgattaaaataaattattttgatgagaga 50049094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 7e-34; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 39729087 - 39728970
Alignment:
Q  25 gatatatgttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaa 124  Q
    |||||| ||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||| ||  ||| ||||||    
T  39729087 gatataagttcattttagatgagagagaatgatgaatgaatgattaaaataaattatttagatgagagagaatatgttggtaagaaagaaatagacacaa 39728988  T
Q  125 aagtatcaatgacaccaa 142  Q
    ||||||||||| ||||||    
T  39728987 aagtatcaatggcaccaa 39728970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 6752058 - 6752179
Alignment:
Q  19 attgatgatatatgttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataa 118  Q
    |||||||| ||| ||||||||||||| ||||| |||||| ||||||| ||||||||||||||||||||| ||||| | || |||| |||||||| ||||     
T  6752058 attgatgacataagttcattttagatgagagagaatgataaatgaatgattaaaataaattatttagatgagagaaagtaagttgttaagagagagatag 6752157  T
Q  119 acacaaaagtatcaatgacacc 140  Q
    ||||| | ||||||||||||||    
T  6752158 acacagaggtatcaatgacacc 6752179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 144
Target Start/End: Complemental strand, 23396027 - 23395915
Alignment:
Q  32 gttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaaagtatc 131  Q
    ||||||||||||| ||||| |||||| ||||||| ||||||||||||||||||||| | ||| |||  |||| |||||||| |||| ||||||| ||| |    
T  23396027 gttcattttagatgagagagaatgataaatgaatgattaaaataaattatttagatgatagagaatgagttgttaagagagagatagacacaaatgtacc 23395928  T
Q  132 aatgacaccaatg 144  Q
    |||||||||||||    
T  23395927 aatgacaccaatg 23395915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 41069657 - 41069772
Alignment:
Q  19 attgatgatatatgttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataa 118  Q
    |||| ||| ||| ||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||| ||||| |||   ||| |||||||  ||||     
T  41069657 attggtgacataggttcattttagatgagagagaatgatgaatgaatgattaaaataaattatttagatgagagagaatgaattgttaagagacagatag 41069756  T
Q  119 acacaaaagtatcaat 134  Q
    ||||||| ||||||||    
T  41069757 acacaaatgtatcaat 41069772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 11226240 - 11226132
Alignment:
Q  32 gttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaaagtatc 131  Q
    |||||||||| || ||||| ||||| |||||||| ||||||||||||||||||||| ||||| |||  |||| |||||||| |||| ||||||| ||| |    
T  11226240 gttcattttaaatgagagagaatgacgaatgaatgattaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaaggtacc 11226141  T
Q  132 aatgacacc 140  Q
    |||| ||||    
T  11226140 aatggcacc 11226132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 31750569 - 31750448
Alignment:
Q  19 attgatgatatatgttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataa 118  Q
    |||| ||| |||| |||||||||||| | ||| |||||||||||||| |||||||||||  |||||||| ||||| |||   ||| |||||||| ||||     
T  31750569 attggtgacatatattcattttagatcacagagaatgatgaatgaatgattaaaataaa--atttagatgagagaaaatgaattgttaagagagagatag 31750472  T
Q  119 acacaaaagtatcaatgacaccaa 142  Q
    ||||||| ||||||||| ||||||    
T  31750471 acacaaaggtatcaatggcaccaa 31750448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 32832590 - 32832651
Alignment:
Q  32 gttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    ||||||||||||| ||||| |||| || |||||| ||||||||||||||||||||| |||||    
T  32832590 gttcattttagatgagagagaatgttggatgaatgattaaaataaattatttagatgagaga 32832651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 3496805 - 3496868
Alignment:
Q  62 gaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaa 125  Q
    |||| ||||||||||||||||||||| ||||| |||  |||| |||||||| |||| |||||||    
T  3496805 gaatgattaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaa 3496868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 125
Target Start/End: Complemental strand, 15141944 - 15141881
Alignment:
Q  62 gaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaa 125  Q
    |||| ||||||||||||||||||||| ||||| |||| |||| ||| |||| |||| |||||||    
T  15141944 gaatgattaaaataaattatttagatgagagagaataagttgttaaaagagagatagacacaaa 15141881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 36562752 - 36562798
Alignment:
Q  47 gagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    |||| |||||||||||||| | ||||||||||||||||||| |||||    
T  36562752 gagagaatgatgaatgaatgagtaaaataaattatttagatgagaga 36562798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 13477690 - 13477747
Alignment:
Q  36 attttagattagagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    ||||| ||| ||||| |||||||||||||| |||||||||| ||||||| || |||||    
T  13477690 attttggataagagagaatgatgaatgaatgattaaaataatttatttaaatgagaga 13477747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 19037073 - 19037130
Alignment:
Q  62 gaattattaaaataaattatttagataagagataatatgttggtaagagagggataaa 119  Q
    |||| ||||||||||||||||||||| ||||| |||  |||| |||||||| ||||||    
T  19037073 gaatgattaaaataaattatttagatgagagagaatgagttgttaagagagagataaa 19037130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 40204728 - 40204777
Alignment:
Q  36 attttagattagagaaaatgatgaatgaattattaaaataaattatttag 85  Q
    |||||| || ||||| ||||||  ||||||||||||||||||||||||||    
T  40204728 attttacatgagagagaatgatagatgaattattaaaataaattatttag 40204777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 6e-28; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 10688715 - 10688592
Alignment:
Q  19 attgatgatatatgttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataa 118  Q
    |||||||| ||| ||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||| ||||| |||  |||| |||||||| ||||     
T  10688715 attgatgacataagttcattttagatgagagagaatgatgaatgaatgattaaaataaattatttagatgagagagaatgagttgttaagagagagatag 10688616  T
Q  119 acacaaaagtatcaatgacaccaa 142  Q
    ||||||| ||| ||||| ||||||    
T  10688615 acacaaaggtaccaatggcaccaa 10688592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 46348376 - 46348450
Alignment:
Q  19 attgatgatatatgttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    |||||||||||  ||||||||||||| ||||| |||||||||||||||||||| ||||| |||||| || |||||    
T  46348376 attgatgatattggttcattttagatgagagagaatgatgaatgaattattaagataaactatttaaatgagaga 46348450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 47548930 - 47548868
Alignment:
Q  32 gttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagat 94  Q
    ||||||||||||| ||||| |||| |||||| || ||||||||||||||||||||| ||||||    
T  47548930 gttcattttagatgagagagaatgttgaatggatgattaaaataaattatttagatgagagat 47548868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 49279553 - 49279464
Alignment:
Q  62 gaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaaagtatcaatgacaccaatgataccaa 151  Q
    |||| ||||||||||||||||||||| ||||| |||  |||| |||||||| |||| |||||||  || | ||||||||||||| |||||    
T  49279553 gaatgattaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaagttacctatgacaccaatgacaccaa 49279464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 50700119 - 50700003
Alignment:
Q  19 attgatgatatatgttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataa 118  Q
    |||| ||| ||| ||||||||||||| ||||||  |||||||| ||| ||||||||||||||||||||  ||||| ||| |||   |||||||| |||      
T  50700119 attggtgacataagttcattttagatgagagaa--tgatgaataaatgattaaaataaattatttagacgagagagaatgtgt---taagagagagat-- 50700027  T
Q  119 acacaaaagtatcaatgacaccaa 142  Q
    ||||||| ||| ||||||||||||    
T  50700026 acacaaatgtaccaatgacaccaa 50700003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 39485467 - 39485528
Alignment:
Q  32 gttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    ||||||||||||| ||||| || | || |||||| ||||||||||||||||||||| |||||    
T  39485467 gttcattttagatgagagagaaggttggatgaatgattaaaataaattatttagatgagaga 39485528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 39488495 - 39488539
Alignment:
Q  49 gaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    ||||||||||||||||| |||||||||||||||||| | ||||||    
T  39488495 gaaaatgatgaatgaataattaaaataaattatttaaaaaagaga 39488539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 125
Target Start/End: Complemental strand, 4037205 - 4037142
Alignment:
Q  62 gaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaa 125  Q
    |||| ||||||||||||||||||||| ||||| |||  |||| |||||||| |||| |||||||    
T  4037205 gaatgattaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaa 4037142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 125
Target Start/End: Complemental strand, 11233570 - 11233507
Alignment:
Q  62 gaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaa 125  Q
    |||| ||||||||||||||||||||| ||||| |||  |||| |||||||| |||| |||||||    
T  11233570 gaatgattaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaa 11233507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 42466974 - 42467008
Alignment:
Q  52 aatgatgaatgaattattaaaataaattatttaga 86  Q
    |||||||||||||| ||||||||||||||||||||    
T  42466974 aatgatgaatgaataattaaaataaattatttaga 42467008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 16278862 - 16278813
Alignment:
Q  36 attttagattagagaaaatgatgaatgaattattaaaataaattatttag 85  Q
    ||||||||| ||| | ||||||| |||||| |||||||||||||||||||    
T  16278862 attttagataagaaagaatgatggatgaataattaaaataaattatttag 16278813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 48914969 - 48915085
Alignment:
Q  19 attgatgatatatgttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataa 118  Q
    |||| ||| ||| ||||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||| ||||| |||  |||| |||||||| ||||     
T  48914969 attggtgacataagttcattttagatgagagagaatgatgaatgaatgattaaaataaattattttgatgagagagaatgagttgttaagagagagatag 48915068  T
Q  119 acacaaaagtatcaatg 135  Q
    |||||||||||||||||    
T  48915069 acacaaaagtatcaatg 48915085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 48915161 - 48915284
Alignment:
Q  19 attgatgatatatgttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataa 118  Q
    |||| ||| ||| ||||||||||||| ||||||  |||||||||||| ||||||||||||||||| ||| ||||| |||  |||| |||||||| ||||     
T  48915161 attggtgacataggttcattttagatgagagaa--tgatgaatgaatgattaaaataaattattttgatgagagagaatgagttgttaagagagagatag 48915258  T
Q  119 acacaaaagtatcaatgacaccaatg 144  Q
    ||||||||||||||||| ||||||||    
T  48915259 acacaaaagtatcaatggcaccaatg 48915284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 48915360 - 48915467
Alignment:
Q  19 attgatgatatatgttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataa 118  Q
    |||| ||| ||| ||||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||| ||||| |||  |||| |||||||| ||||     
T  48915360 attggtgacataagttcattttagatgagagagaatgatgaatgaatgattaaaataaattattttgatgagagagaatgagttgttaagagagagatag 48915459  T
Q  119 acacaaaa 126  Q
    ||||||||    
T  48915460 acacaaaa 48915467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 50539712 - 50539835
Alignment:
Q  19 attgatgatatatgttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataa 118  Q
    |||| ||| ||| ||||||||||||  ||||| ||||||||||  || |||||||||||||||||| |||| ||| |||  |||| |||||||| ||||     
T  50539712 attggtgacataagttcattttagaagagagataatgatgaatagatgattaaaataaattatttaaataaaagagaatgagttgttaagagagagatag 50539811  T
Q  119 acacaaaagtatcaatgacaccaa 142  Q
    ||||||| || ||||| |||||||    
T  50539812 acacaaaggtgtcaataacaccaa 50539835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 19456308 - 19456417
Alignment:
Q  33 ttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaaagtatca 132  Q
    |||||||||||| ||||| ||||||||||  || ||||||||||||||||||||| ||||| |||   ||| ||||| || |||| ||||||| ||  ||    
T  19456308 ttcattttagatgagagagaatgatgaatagatgattaaaataaattatttagatgagagagaatgaattgttaagaaagagatagacacaaaggtgcca 19456407  T
Q  133 atgacaccaa 142  Q
    ||||||||||    
T  19456408 atgacaccaa 19456417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 33 - 142
Target Start/End: Complemental strand, 24671249 - 24671140
Alignment:
Q  33 ttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaaagtatca 132  Q
    |||||||||||| ||||| | |||||||||||| |||||||||||||||||| || ||||| |||  || | |||||||  |||  | ||||| ||||||    
T  24671249 ttcattttagatgagagagagtgatgaatgaatgattaaaataaattatttaaatgagagagaatgagtggttaagagaaagatggaaacaaaggtatca 24671150  T
Q  133 atgacaccaa 142  Q
    ||||||||||    
T  24671149 atgacaccaa 24671140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 142
Target Start/End: Complemental strand, 26478652 - 26478546
Alignment:
Q  36 attttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaaagtatcaatg 135  Q
    ||||||||| ||||| |||||||||||||| |||||||||||| ||||| || | |||||||   ||| ||| |||  |||| ||||||| ||| |||||    
T  26478652 attttagatgagagagaatgatgaatgaataattaaaataaatcatttaaatgaaagataatgaattgttaaaagaaagatagacacaaaggtaccaatg 26478553  T
Q  136 acaccaa 142  Q
    |||||||    
T  26478552 acaccaa 26478546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 20717120 - 20717165
Alignment:
Q  48 agaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||    
T  20717120 agaaaatgatgaataaattattaaaataaattatttagattagaga 20717165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 27032326 - 27032415
Alignment:
Q  62 gaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaaagtatcaatgacaccaatgataccaa 151  Q
    |||| ||||||||||||||||||||| ||||| |||  |||| |||||||| |||| |||||||  || | ||||||||||||| |||||    
T  27032326 gaatgattaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaagttacccatgacaccaatgacaccaa 27032415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 49177483 - 49177424
Alignment:
Q  37 ttttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataat 97  Q
    |||||||| |||||||||||||| ||||| ||||||||||||||||||||| | |||||||    
T  49177483 ttttagatgagagaaaatgatga-tgaatgattaaaataaattatttagatgaaagataat 49177424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 5398034 - 5398080
Alignment:
Q  47 gagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    |||| |||||||||||||||||||||||||| ||||||||| |||||    
T  5398034 gagagaatgatgaatgaattattaaaataaactatttagatgagaga 5398080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 27907767 - 27907685
Alignment:
Q  62 gaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaaagtatcaatgacaccaatg 144  Q
    |||| ||||||||||||||||||||| ||||| |||  |||| |||||||| |||| |||||||  || | ||||||||||||    
T  27907767 gaatgattaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaagttacctatgacaccaatg 27907685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 49177337 - 49177278
Alignment:
Q  32 gttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    ||||||||||||| |||||| ||  ||||| ||||||||||||||||||||||||| |||||    
T  49177337 gttcattttagatgagagaatat--tgaataaattattaaaataaattatttagatgagaga 49177278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 19431391 - 19431448
Alignment:
Q  36 attttagattagagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    ||||||||| ||| | ||||||| |||||| ||||||||||||||||||||| |||||    
T  19431391 attttagatgagacagaatgatggatgaatgattaaaataaattatttagatgagaga 19431448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 17923920 - 17923859
Alignment:
Q  32 gttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    |||||||||  || ||||| |||| || |||||| ||||||||||||||||||||| |||||    
T  17923920 gttcattttttatgagagagaatgttggatgaataattaaaataaattatttagatgagaga 17923859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 25586916 - 25586867
Alignment:
Q  46 agagaaaatgatgaatgaattattaaaataaattatttagataagagata 95  Q
    |||||||||||| |||||||  ||||||||||||||| | ||||||||||    
T  25586916 agagaaaatgatcaatgaatatttaaaataaattattcaaataagagata 25586867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 3950295 - 3950343
Alignment:
Q  35 cattttagattagagaaaatgatgaatgaattattaaaataaattattt 83  Q
    |||||||||| ||||| ||||||  |||||| |||||||||||||||||    
T  3950295 cattttagatgagagagaatgatcgatgaatgattaaaataaattattt 3950343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 2628420 - 2628536
Alignment:
Q  19 attgatgatatatgttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataa 118  Q
    |||| ||| ||| ||||||||||||| ||||| |||||||||| ||| ||||||||||| ||||||||| ||||| |||  |||| |||||||| ||||     
T  2628420 attggtgacataagttcattttagatgagagagaatgatgaataaatgattaaaataaactatttagatgagagagaatgagttgttaagagagagatag 2628519  T
Q  119 acacaaaagtatcaatg 135  Q
    |||||||||||||||||    
T  2628520 acacaaaagtatcaatg 2628536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 9488752 - 9488877
Alignment:
Q  18 tattgatgatatatgttcattttagattagagaa-aatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggat 116  Q
    ||||||||| ||| ||||||||||||| |||| | |||||||||||||| |||||||||||||||||||| || ||  |||  |||| |||||||| |||    
T  9488752 tattgatgacataagttcattttagatgagaggagaatgatgaatgaatgattaaaataaattatttagagaatagggaatgagttgttaagagagagat 9488851  T
Q  117 aaacacaaaagtatcaatgacaccaa 142  Q
    | ||||||| ||||||||| ||||||    
T  9488852 atacacaaaggtatcaatggcaccaa 9488877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 32279291 - 32279352
Alignment:
Q  32 gttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||| || |||||    
T  32279291 gttcattttagatgagagaaaatgatgaatgaataattaaaataaattatttaaatgagaga 32279352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 33748030 - 33747989
Alignment:
Q  52 aatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    |||||||||||||  |||||||||||||||||||||||||||    
T  33748030 aatgatgaatgaacaattaaaataaattatttagataagaga 33747989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 37685187 - 37685248
Alignment:
Q  32 gttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    ||||||||||||  ||||| |||| || |||||| ||||||||||||||||||||| |||||    
T  37685187 gttcattttagacgagagagaatgttggatgaatgattaaaataaattatttagatgagaga 37685248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 16876743 - 16876806
Alignment:
Q  62 gaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaa 125  Q
    |||| ||||||||||||||||||||| ||||| |||  |||| |||||||| |||| |||||||    
T  16876743 gaatgattaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaa 16876806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 18867954 - 18868017
Alignment:
Q  62 gaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaa 125  Q
    |||| ||||||||||||||||||||| ||||| |||  |||| |||||||| |||| |||||||    
T  18867954 gaatgattaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaa 18868017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 23185929 - 23185992
Alignment:
Q  62 gaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaa 125  Q
    |||| ||||||||||||||||||||| ||||| |||  |||| |||||||| |||| |||||||    
T  23185929 gaatgattaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaa 23185992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 46425344 - 46425407
Alignment:
Q  62 gaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaa 125  Q
    |||| ||||||||||||||||||||| ||||| |||  |||| |||||||| |||| |||||||    
T  46425344 gaatgattaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaa 46425407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 11369053 - 11369106
Alignment:
Q  33 ttcattttagattagagaaaatgatgaatgaattattaaaataaattatttaga 86  Q
    |||||||||||| ||||| |||| || || ||| ||||||||||||||||||||    
T  11369053 ttcattttagatgagagagaatgttggataaatgattaaaataaattatttaga 11369106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 15667938 - 15667897
Alignment:
Q  56 atgaatgaattattaaaataaattatttagataagagataat 97  Q
    |||||||||| |||||||||||||||||| || |||||||||    
T  15667938 atgaatgaatgattaaaataaattatttaaatgagagataat 15667897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 32204832 - 32204771
Alignment:
Q  36 attttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataat 97  Q
    ||||||||| |||||| |||||  || ||| |||||||||||||||||| || |||||||||    
T  32204832 attttagatgagagaagatgatagataaatgattaaaataaattatttatatgagagataat 32204771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 34328169 - 34328091
Alignment:
Q  62 gaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaaagtatcaatgacaccaa 142  Q
    |||| ||||||||||||||||||||| ||||| |||  |||| |||||||  |||| |||||||  |||| ||||||||||    
T  34328169 gaatgattaaaataaattatttagatgagagagaatgagttgttaagaga--gatagacacaaagttatctatgacaccaa 34328091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 43368497 - 43368538
Alignment:
Q  46 agagaaaatgatgaatgaattattaaaataaattatttagat 87  Q
    ||||| ||||||| |||||| |||||||||||||||||||||    
T  43368497 agagagaatgatggatgaatgattaaaataaattatttagat 43368538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 27554907 - 27554995
Alignment:
Q  19 attgatgatatatgttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaa 107  Q
    |||||||||||| ||| ||||||||| |||||||||||||||| ||| ||||||||| ||||||||||| ||||| |||||||||||||    
T  27554907 attgatgatataagtttattttagatgagagaaaatgatgaataaataattaaaatagattatttagatgagagaaaatatgttggtaa 27554995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 2651692 - 2651618
Alignment:
Q  56 atgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaaagtat 130  Q
    |||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||| |||||||||||||||||    
T  2651692 atgaatgaatgattaaaataaattatttagatgagatagaatatgttggtaagagagagataaacacaaaagtat 2651618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 34928901 - 34928806
Alignment:
Q  19 attgatgatatatgttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagat--aagagataatatgttggtaagagag 112  Q
    |||||||| ||||||||||||||||| ||||| |||||| ||||||| |||||||||||||||||||||  |||||| |||| |||| ||||||||    
T  34928901 attgatgacatatgttcattttagatgagagagaatgataaatgaatgattaaaataaattatttagatgaaagagagaataagttgttaagagag 34928806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 136
Target Start/End: Complemental strand, 22658921 - 22658818
Alignment:
Q  32 gttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaaagtatc 131  Q
    ||||||||||||| | ||| |||||||||||||| |||||||||||||||||| || | | | | ||||||| ||| |||| |||||| |||||||||||    
T  22658921 gttcattttagatgaaagagaatgatgaatgaatgattaaaataaattatttaaatgaaaaaaagtatgttgctaacagagagataaa-acaaaagtatc 22658823  T
Q  132 aatga 136  Q
    |||||    
T  22658822 aatga 22658818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 14151926 - 14151993
Alignment:
Q  19 attgatgatatatgttcattttagattagagaaaatgatgaatgaattattaaaataaattatttaga 86  Q
    |||||||| ||| ||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||    
T  14151926 attgatgacataggttcattttagatgagagataataatgaatgaatgattaaaataaattatttaga 14151993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 18267851 - 18267916
Alignment:
Q  32 gttcattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataat 97  Q
    |||| |||||||| ||||| ||||||| || ||| |||||||||||||||||| |||| |||||||    
T  18267851 gttcgttttagataagagagaatgatggattaataattaaaataaattatttaaataaaagataat 18267916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 33953218 - 33953161
Alignment:
Q  36 attttagattagagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    ||||||||| ||||| |||| || |||||| ||||||||||||||||||||| |||||    
T  33953218 attttagatgagagagaatggtggatgaataattaaaataaattatttagatgagaga 33953161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 18623597 - 18623644
Alignment:
Q  46 agagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    ||||| ||||||  |||||| |||||||||||||||||||||||||||    
T  18623597 agagagaatgatagatgaatgattaaaataaattatttagataagaga 18623644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 37515589 - 37515652
Alignment:
Q  62 gaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaa 125  Q
    |||| ||||||||||||||||||||| | |||||||  |||| |||||||| |||| |||||||    
T  37515589 gaatgattaaaataaattatttagatgatagataatgagttgttaagagagagatagacacaaa 37515652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 22653571 - 22653513
Alignment:
Q  35 cattttagattagagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    |||||||||| ||| | ||| ||| |||||| ||||||||| |||||||||||||||||    
T  22653571 cattttagatgagaaagaataatggatgaatgattaaaatagattatttagataagaga 22653513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 19824674 - 19824617
Alignment:
Q  36 attttagattagagaaaatgatgaatgaattattaaaataaattatttagataagaga 93  Q
    ||||||||| ||||| |||| |  |||||| ||||||||||||||||||||| |||||    
T  19824674 attttagatgagagagaatgttagatgaatgattaaaataaattatttagatgagaga 19824617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 14281810 - 14281862
Alignment:
Q  36 attttagattagagaaaatgatgaatgaat-tattaaaataaattatttagat 87  Q
    ||||||||| ||||| ||||||  |||||| ||||||||||||||||||||||    
T  14281810 attttagatgagagagaatgatagatgaatgtattaaaataaattatttagat 14281862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 26847230 - 26847168
Alignment:
Q  36 attttagattagagaaaatgatgaatgaattattaaaataaattatttagataagagataata 98  Q
    ||||||||| ||||| ||||||  |||||| | ||||||||||||||||||||||||||||||    
T  26847230 attttagatgagagagaatgatagatgaatgagtaaaataaattatttagataagagataata 26847168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 457739 - 457683
Alignment:
Q  36 attttagattagagaaaatgatgaatgaattattaaaataaattatttagataagag 92  Q
    ||||||||| ||||| ||||||| |||||| ||||||||||||||||||||| ||||    
T  457739 attttagatgagagagaatgatggatgaatgattaaaataaattatttagatgagag 457683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 143
Target Start/End: Complemental strand, 31743922 - 31743843
Alignment:
Q  62 gaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaaagtatcaatgacaccaat 143  Q
    |||| |||||||||||||||||||||  |||| |||| |||| ||| |||| |||| |||||||| |||| |||||||||||    
T  31743922 gaatgattaaaataaattatttagat--gagagaataagttgttaaaagagagatagacacaaaactatctatgacaccaat 31743843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 125
Target Start/End: Complemental strand, 9928325 - 9928262
Alignment:
Q  62 gaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaa 125  Q
    |||| ||||||||||||||||||||| ||||| |||  |||| |||||||| |||| |||||||    
T  9928325 gaatgattaaaataaattatttagatgagagagaatgagttgttaagagagagatagacacaaa 9928262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 24226148 - 24226101
Alignment:
Q  36 attttagattagagaaaatgatgaatgaattattaaaataaattattt 83  Q
    ||||||||| ||||||||||||  |||||| |||||||||||||||||    
T  24226148 attttagatgagagaaaatgatagatgaatgattaaaataaattattt 24226101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 9549436 - 9549369
Alignment:
Q  56 atgaatgaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaa 125  Q
    |||||||||| |||||||||||||||||| || ||||| |||  |||| |||||||  ||||||||||||    
T  9549436 atgaatgaatgattaaaataaattatttaaattagagagaatgagttgttaagaga--gataaacacaaa 9549369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 7506696 - 7506639
Alignment:
Q  62 gaattattaaaataaattatttagataagagataatatgttggtaagagagggataaa 119  Q
    |||| ||||||||||||||||||||| ||||| |||  |||| |||||||| ||||||    
T  7506696 gaatgattaaaataaattatttagatgagagagaatgagttgttaagagagagataaa 7506639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 22469763 - 22469674
Alignment:
Q  62 gaattattaaaataaattatttagataagagataatatgttggtaagagagggataaacacaaaagtatcaatgacaccaatgataccaa 151  Q
    |||| ||||||||||||||||||||| ||||| |||  |||| ||||| || |||| |||||||  || | ||| ||||||||| |||||    
T  22469763 gaatgattaaaataaattatttagatgagagagaatgagttgttaagaaagagatagacacaaagttacctatggcaccaatgacaccaa 22469674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 20355 - 20314
Alignment:
Q  56 atgaatgaattattaaaataaattatttagataagagataat 97  Q
    |||||||||| ||||||||||||||||||||| |||||||||    
T  20355 atgaatgaatgattaaaataaattatttagatgagagataat 20314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University