View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6193_low_10 (Length: 312)
Name: NF6193_low_10
Description: NF6193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6193_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 300; Significance: 1e-169; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 40783450 - 40783147
Alignment:
| Q |
1 |
ccattaaacataaccaaagtcctagaaaaggcaggacaattcacaacattcatcaagctactaaaagcaacacaagtatccgaccgaatcaactcacaac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40783450 |
ccattaaacataaccaaagtcctagaaaaggcaggacaattcacaacattcatcaagctactaaaagcaacacaagtatccgaccgaatcaactcacaac |
40783351 |
T |
|
| Q |
101 |
tcaacagctcaaatcaaggcctaacaatttttgcaccaacagataatgccttctcgagtctaaaatcaggaacactaaactcaatcagcacacaaaacca |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40783350 |
tcaacaactcaaatcaaggcctaacaatttttgcaccaacagataatgccttctcgagtctaaaatcaggaacactaaactcaatcagcacacaaaacca |
40783251 |
T |
|
| Q |
201 |
acttcaacttctacagtttcatattctaccaacactttacacaatatcacagtttcaaactgcaagtaaccctctacacacacaagctggaaacagtgat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40783250 |
acttcaacttctacagtttcatattctaccaacactttacacaatatcacagtttcaaactgcaagtaaccctctacacacacaagctggaaacagtgat |
40783151 |
T |
|
| Q |
301 |
gatg |
304 |
Q |
| |
|
|||| |
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|
| T |
40783150 |
gatg |
40783147 |
T |
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