View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6193_low_13 (Length: 277)
Name: NF6193_low_13
Description: NF6193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6193_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 41094365 - 41094095
Alignment:
| Q |
1 |
ggtttgaaacggagtaacgaaatcagggttagggttagggcttgaaactccgaatccatatccgggaggagaatgttggtcattgttgatgttgttgctg |
100 |
Q |
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| T |
41094365 |
ggtttgaaacggagtaacgaaatcagggttagggttagggcttgaaactccgaatccatatccgggaggagaatgttggtcattgttgatgttgttgctg |
41094266 |
T |
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| Q |
101 |
gtgtcaacggtgaggtgatcgtcgtcgggattatttggaggatggaatgtggatccataatcaaactgctgttgagaattgaatccttcatagttactat |
200 |
Q |
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| T |
41094265 |
gtgtcaacggtgaggtgatcgtcgtcgggattatttggaggatggaatgtggatccataatcaaactgctgttgagaattgaatccttcatagttactat |
41094166 |
T |
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| Q |
201 |
tattgtcatcttcaaaaggtcctcctactactactcctcctcctccaccagtggttggagattgatgatgt |
271 |
Q |
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| T |
41094165 |
tgttgtcatcttcaaaaggtcctcctactactactcctcctcctccaccagtggttggagattgatgatgt |
41094095 |
T |
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